ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1053981 | iPS cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◣ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

GSN
RAB14
CAMTA1
POLR3H
D2HGDH
ARL4D
KCTD18
ZNF555
NPAS4
CHRNA1
ASF1A
GPR158
DHDDS
MXI1
CDT1
APRT
EAPP
ZNF581
ZNF580
CCDC106
U2AF2
TRIM24
RAD23A
CALR
FARSA
USP54
DUX4
DTX1
GOLGA7
TDRD7
ZEB1
MTDH
RNF187
SRA1
SLC35A4
APBB3
ZNF316
STN1
ZNF77
ART1
ANKRD31
L3MBTL4
ATP1A4
ARHGDIA
GJC1
TIPARP
THAP9
SEC31A
KIAA1586
PXMP4
RFX4
SH3GL3
NEIL3
TXLNA
INTS13
FGFR1OP2
MAMDC2
HTR5A
MTRNR2L2
MSH3
DHFR
KIF5C
XKR7
MTRNR2L8
WDR74
STX5
IQSEC3
NKX1-1
LOC102724770
DGCR6
LIN28A
SMIM17
INSM2
MTRNR2L1
FRG2C
FAM24A
CPLX2
NOTCH2NLC
CCDC200
RIPPLY2
CYB5R4
GBA
NOTCH2NLB
NOTCH2NLA
DLGAP3
RAB37
NBPF1
PDE4DIP
RBM48
PEX1
KCNH7
HPCA
STAT1
NOTCH2
CRBN
EPHA10
SUMF1
MUC3A
SNX16
TPH2
RGPD2
RGPD1
CADM3
FANCD2
PDE6D
COPS7B
CELSR3
MARCHF4
NUF2
KXD1
WASHC2C
BARHL1
ARID3B
FRG2
RTBDN
MAST1
NME1
USP30
MTRNR2L9
SNAP25
UTP20
VPS50
HEPACAM2
TMEM242
STX16
LPIN1
ZNF23
CEBPE
DNAJC5
SVOP
CDKN1A
SLC39A3
POLR2J3
VIM
NAGPA
AFAP1
SCFD2
SPTAN1
TTC26
TTLL4
EIF2D
LMLN2
WASHC2A
RRP15
IFT46
ARCN1
LARP1
ZNF335
PRRC2B
TMEM101
ZC3H18
SPATA25
CTSA
AHCY
EPN1
SSBP1
TRIP4
PCLAF
PPP1R35
COMMD2
UTP25
SPNS1
PTPRN2
SPOP
HEXA
IDH3B
SMG8
ZCWPW1
MEPCE
TAS1R3
NEURL2
LAT
PSEN2
NUP214
MAPK8IP2
RAP1GAP
L1CAM
CHGB
ITGB3BP
EFCAB7
SUPT7L
SLC4A1AP
INTS12
GSTCD
SCRT1
CA4
RTN3
ATL3
RINL
PRR14
FBRS
ZCCHC7
NEK2
VPS33A
PRR5L
FAM227B
DTWD1
TM9SF1
IPO4
HAGH
FAHD1
TBC1D19
UNC45B
NLE1
EIF1AD
CST6
BANF1
DGAT1
GLRA1
GTF3C3
C2orf66
DHX40
GATB
FHL3
RBBP5
COMMD9
TRMT1
NACC1
WASHC5
NSMCE2
PYY
NAGS
MTFR2
SPDYE7P
POM121
PSMD9
HPD
P4HA1
CRNKL1
CFAP61
PMF1-BGLAP
PMF1
PKDCC
TTC24
IQGAP3
PGAM5
SOD2
SF3A3
CENPP
WDR36
SEPTIN9
COX16
TMEM248
PAXBP1
PEX3
ADAT2
PAFAH2
NCAPH
ITPRIPL1
METAP1D
RHEBL1
RABGAP1L
CDK5RAP1
KDM2A
UTP11
SULT1A4
SULT1A3
SEBOX
PLEKHM3
RBM19
PDXK
NPPB
TDRKH
HDAC2
NOL8
EXO1
UBFD1
EARS2
SIT1
ZC3HC1
OSCAR
NDUFA3
SMARCD2
NEUROD4
MTF2
SGO1
SLX1B
SLX1A
BOLA2B
BOLA2
NUP107
ZSWIM1
RPS7
SEC24B
GAS8
PGBD5
CENPF
RPS19
MRPL44
CCDC107
ARHGEF39
JUNB
HOOK2
HIBADH
HMGB1
RRM2
NFE2L2
MTERF4
EIF3F
GPATCH3
UBE3B
KCTD10
ERCC1
KCNB1
WTAP
CCNG2
PHRF1
ATG14
TARS2
CERCAM
TIMM17A
RBM28
LMOD1
METTL15
KIF18A
VTA1
NMBR
DCUN1D2
QTRT1
TMEM262
C8orf33
DDX18
TSFM
RRP12
RFC1
MED23
FXN
ZNHIT2
MRPL49
FAU
CFAP54
MTRNR2L10
PFDN4
RTN4
PWWP2A
PRRT3
CCNA2
TACO1
TATDN3
NSL1
TOP3B
USP35
KCTD21
STX18
CBLL1
ATR
SPRED2
DNPEP
DRG2
COX6A1
USP2
PHC2
DCLRE1B
CKAP2L
AP4B1
KHK
KDM5B
CPPED1
EBAG9
RGL1
IQSEC1
ZKSCAN8
CHCHD1
ADAMTS17
BIRC5
BEND3
YARS1
S100PBP
PLEC
SHC1
CKS1B
NXPH3
EMILIN1
TRMO
SAP30BP
RECQL5
BOLA2-SMG1P6
KLHL18
KIF9
KIAA0895
CYP27C1
UBC
NOS3
FLAD1
TEX46
ARPC5
GET3
PPIP5K1
CKMT1B
BUB1B
ARL17B
NSUN4
KIF20A
BRD8
MTBP
MRPL13
TSR3
GNPTG
USPL1
GPN2
STMN3
RTEL1
DYNC2I1
UBE2O
AANAT
TM7SF2
FBXO5
GTF2H4
ZNF276
VPS9D1
TMEM199
POLDIP2
WDR11
WBP1
INO80B
PSMD6
CSTF1
AURKA
STAT3
ZNF830
FRMD3
CCT6B
RBM47
ESCO2
CCDC25
FBXO4
CRYBG1
FAM72C
TOMM22
RAB42
INKA2
POLR3F
DZANK1
COMMD4
ADNP
MTIF2
SFSWAP
DNAJC25-GNG10
DNAJC25
SEC13
NDUFS7
DNTTIP2
BHLHE40
ICMT
HES3
CAND1
LRRC59
CCDC88A
TRAPPC6A
SMIM12
BLOC1S3
KDM1A
GTF3C5
EEF1AKMT3
SNX1
CIAO2A
NUP54
NBPF15
PDE1C
ATP6V0D1
AGRP
TXNDC9
STAG1
EMILIN2
EIF5B
CCDC86
CRKL
DNAJC11
EBNA1BP2
CFAP57
PUS10
PEX13
YTHDF2
SLC25A51
VPS72
RAE1
PIP5K1A
MTRNR2L3
DPF1
SPATA2
PPM1B
CORO7-PAM16
CORO7
CBWD5
UBE2Q1
CHRNB2
NDUFS3
NDUFAF5
KBTBD4
ESF1
CYRIB
FAM180B
OAZ3
VARS2
DGKZ
KLHL20
ASMTL
ELOVL1
CDC20
SYNJ2
PBK
MFSD1
FAM117B
TEKT2
ADPRS
METTL1
CYP27B1
RARA
RAD54L
ZCCHC4
TTC27
DNAJC6
PDE4C
LAMP1
NMNAT1
LZIC
XRN1
TJP3
PSMC2
FAM133B
DNAJC2
SYTL3
SPG21
MRM3
GLOD4
SLC12A9
SLC25A26
RRS1
ADHFE1
YIF1A
TMEM151A
ANTXR1
RFX1
SMIM5
SLC25A40
DBF4
CBWD3
SLC39A7
RXRB
LTV1
PC
LHFPL4
SPAAR
HRCT1
N6AMT1
ACVR1
KIF18B
SASS6
TIGAR
DMAP1
SELENOH
SCP2
NUP35
ANAPC5
CDKN2C
ASIC3
MRPL3
BCAS3
CYB5A
TSEN54
SLC33A1
GLI4
SDAD1
TRUB2
COQ4
TMEM222
PARD6B
MACC1
PRKAG2
MICAL3
F11R
ZHX2
RNF166
CTU2
C12orf66
FAM72A
FAM98A
H6PD
PIH1D2
NKAPD1
ID1
ERG
HUS1
ARHGAP45
SUGCT
NOP16
MPLKIP
HIGD2A
EIF3H
VPS29
RAD9B
DBNDD2
DNAH7
TRIAP1
KLHL32
LRIG1
GPR107
SLC25A45
FRMD8
RTTN
MRPS15
POLR2J
TTC31
CCDC142
MRPS35
UBE2L3
DCAF10
LLGL2
FAF1
SYT11
GON4L
PIKFYVE
ATP5F1E
LSG1
CASKIN2
BOD1
TEFM
C1orf159
FAM240C
PDE4A
SGO2
CKMT1A
GDAP1
SNRPB2
MAD2L2
ELMO1
VPS45
RAB18
AEBP2
TEAD1
NDUFAF4
KAT5
INTS7
DTL
SLC45A4
PEDS1-UBE2V1
PEDS1
FAM228B
FAM207A
NTSR2
TFIP11
RBM42
TMEM41A
NOL6
ICAM2
RUVBL1
EIF2B3
SYNJ1
GSC2
BNIP1
TSN
WBP1L
RING1
MRPL40
HSD17B8
HIRA
NDUFB3
FAM126B
POLR2J2
MRPS18C
HELQ
LRRC46
ANKHD1-EIF4EBP3
ANKHD1
BLCAP
SMIM30
RNF181
PPP2R2C
MRPS23
ANXA5
NOP53
DUSP1
SRRM3
FAM98B
COL23A1
MARCHF8
DZIP3
CIP2A
FRA10AC1
MRPL30
MITD1
ENOSF1
WDR70
PSMD3
NUP155
NDUFC2-KCTD14
NDUFC2
GPSM1
RAD51AP1
C12orf4
RDH5
ITGA7
BLOC1S1
CDC73
EXOSC5
BNIP3L
BCKDHA
MFSD14A
ZNF668
ZNF646
TPCN1
IL1R1
PALM2AKAP2
KAT2B
DBNL
ANK1
ZCCHC14
TAF13
GATAD2A
CWC25
CHSY1
PPCDC
CCDC146
POLR3GL
CCDC77
ANKRD34A
TAMM41
SST
DHX37
BRI3BP
AAR2
C2orf42
ACBD6
ZSWIM8
TBC1D30
GFM2
VPS37D
NOL7
TMEM181
METTL25
CCDC59
KIF2C
ZNF398
ZDHHC12
WDR4
RGS3
KIAA0895L
EXOC3L1
E2F4
BAIAP2
ATG9B
PUM3
NEK6
PDE11A
SOGA1
PPP1R18
NRM
TMEM120A
MIS18A
CENPS-CORT
CENPS
TRMT6
MCM8
ST6GAL1
HSD17B1
SYNPO
LIX1L
XKR9
UBE2H
LACTB2
CGGBP1
THAP7
DENND2B
TP53I3
SF3B6
PASD1
MAIP1
ZBTB45
MOK
DDX31
RNASEH2C
KCNJ14
GRWD1
CDK7
PTPRH
MTR
KCNN4
CDC25A
C2CD5
CARD8
FBXW8
SSNA1
OSBPL7
ANAPC2
OLFML2A
U2SURP
DSTYK
CLK3
AURKAIP1
E2F6
OGDH
PFDN6
PCNA
EHD1
DPY19L4
PIEZO1
FBXO48
APLF
UTP3
SYF2
KDM3A
ZNF546
COASY
NFXL1
ANP32E
H4C14
H3C15
H3C14
C10orf88
NGDN
RIPOR3
KMT2D
TICRR
RBM45
ARHGEF12
CPSF1
CLCN3
CUEDC1
RABL2B
C16orf90
CFAP299
IBA57
SLC19A1
WDR24
SMN2
SMN1
GTF2H3
EIF2B1
AEN
KTI12
CDC6
STEAP2
H4C12
TLE6
SH2B3
ESYT2
NADK2
WIZ
C17orf49
BCL6B
PSME3
BECN1
MOCS3
DPM1
ACVR2A
MPHOSPH10
MCEE
DIAPH1
RGL2
ENTPD4
SNRPE
NUDT15
TBRG4
MRPL39
GTPBP10
RGPD8
RGPD5
KIF15
KIAA1143
HNRNPF
ZFYVE1
PPP1R11
POLR1H
FNBP1
IPO11
DIMT1
ZC3H15
CBWD6
ZNF558
ADAMTS14
SMYD5
NUP42
PNPT1
FAM72B
TYW1
SBDS
SRSF11
DIABLO
MRPL48
NNAT
NAGK
SLC44A1
CEP55
CACNG3
ANKRD12
SEC22B
COPS4
TYW1B
HSPA9
E2F1
CDK11B
CDK11A
OPA1
NIF3L1
ZNF391
GFM1
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
TRMT61B
QTRT2
EDC3
CCDC191
GRN
POMZP3
DAZAP1
ZMPSTE24
PPIL3
KRR1
FBXL13
ARMC10
HNRNPH1
TAF12
ARRB1
POLQ
KCTD5
HNRNPD
ABCB8
ADAMTS13
UNKL
MAGEB10
KNTC1
DDX20
BCAR3
NGB
GPR84
CPNE4
PPP6R1
SLC7A5
NSUN5
FAM72D
MEF2C
ATXN2L
SCRN3
CIR1
PPFIA3
LRRC29
C19orf73
VGLL4
SH3GLB2
PRPF18
RIMBP3C
RIMBP3B
TBP
PSMB1
CLVS1
LSM12
G6PC3
ALKBH3
AGK
RGPD6
SLC24A1
TMEM237
ARID3A
TFPT
PRPF31
MRPL1
GNAL
E2F2
BSDC1
NR6A1
LSM5
AVL9
RPAP3
TIMM9
SPDYE16
RAD54L2
KIAA0586
ENTPD2
ADK
UCHL5
RO60
PLXNA1
ZSCAN22
CTCF
POLD1
NR1H2
CFAP298-TCP10L
CFAP298
NOTUM
CCNL1
TMED9
SLC27A5
WBP2
UBL5
TGIF1
PPIH
DHRS13
SHQ1
TTC9B
ZNF718
ZNF595
RAD18
POLR3B
GTF3C4
TFB2M
TBC1D16
CNST
CCDC92B
TMEM170B