ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100390 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◣ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

ASF1A
PMF1-BGLAP
PMF1
NPAS4
LARP1
MARCHF4
SNX1
CIAO2A
WDR74
KDM2A
TDRD7
GSN
RAB14
ZEB1
SDHB
MAP2
DNAJC5
RABGAP1L
SLC35A4
APBB3
XKR7
VIM
POM121
GPR158
C2orf42
MAMDC2
GPAT4
LIN28A
RAB18
DDX18
UBFD1
EARS2
DLGAP3
NEUROD4
STEAP2
DHDDS
FAM24A
SELENOM
TPH2
NKX1-1
CENPF
TAS1R3
PIKFYVE
STAG1
PPM1B
RAB6A
CTDSP1
TMEM161B
KXD1
KCNH7
INSM2
ULK2
DNPEP
CFAP20
PTCRA
TMEM170B
AHCYL2
RGL1
ARPC5
ZNF546
IFT46
C22orf34
EPHA10
KCNH6
ADAMTS17
PARD6B
UBP1
MAPK8IP2
CYB5R4
MPP5
CAMK4
CELSR3
CCDC107
PABPC4
ZNHIT2
TM7SF2
TXLNA
CEMIP
YTHDF2
MTFR1
LOC100289561
EEF1A1
CAMTA1
EEPD1
CPLX2
DCUN1D2
NEIL3
TEX46
KDM1A
ELL
ARHGEF17
KIAA0895
PKDCC
PGAM5
ZKSCAN8
HTR5A
HSPA9
SNX16
ZAR1L
BRCA2
TIPARP
KHK
RTBDN
ARHGEF10
SLC6A6
IQSEC3
ANKAR
PLEKHA3
FKBP7
ZNF677
VN1R2
MEI4
ANXA5
APBA2
DOT1L
ZNF555
RPH3A
MUC3A
SCAF1
RRAS
CABP1
TNC
GIT1
ANKRD13B
PDE1C
C2CD5
MTRNR2L1
NUP58
MZT1
BORA
CATSPERE
PHF1
UNC45B
ARPC2
MRPL48
IFFO1
ZSWIM6
POLDIP3
CARTPT
ANTXR1
CPNE9
TMEM41B
TTLL4
USP30
SVOP
C1orf198
SOD2
WTAP
HNRNPH1
PPDPF
NGB
DCDC2
FSD1L
KAAG1
MUC12
WDR36
RBM4B
PTPRG
TXNDC9
EIF5B
EGR4
PXK
FAM227B
DTWD1
KCTD18
FRMD3
GBA
ANKRD31
CABP7
MTDH
CDC73
RESP18
COPS7B
PDE6D
NPPB
HOOK1
MTRNR2L2
MSH3
DHFR
SYT17
FGF12
FDPS
RPAP3
MBD6
DDIT3
HPCA
PSMD6
RGS9
SMIM17
RSU1
CHN2
CPVL
PTMS
SMIM30
MAML3
ANAPC5
WTIP
RNASEK
C17orf49
TMEM272
NF1
ZNF77
SWSAP1
WASHC2C
XPO1
REEP5
ASB6
PIP4K2B
CYP26C1
SCN3B
PRKCA
SMIM12
WWC2
OGDH
EHBP1
FZR1
SMPD3
MTRNR2L8
SMIM14
PDHA2
RAB37
NSUN6
ENTPD8
PSMD3
MACROD2
SEL1L2
WASHC2A
PRKRA
PJVK
DHH
CHST10
MARCHF7
CXXC4
SEPHS1
NDEL1
SLC39A3
FARSA
CALR
TTYH2
PAQR3
USP54
CBLL1
CMTM5
WWC1
SPG21
ELMO1
SMG7
OVOL2
UPK3BL1
PSMC4
CXCL17
EPHB1
CYSRT1
RNF208
RNF224
CLN8
ACVR1
DIAPH1
LSM14B
SLC35E4
ANKRD12
ZNF594
LNPEP
EFNA5
SAR1A
FBRS
GOLGA7
CPEB4
SCML1
PDXK
ARID2
U2AF1L5
U2AF1
LRRC71
KHDRBS1
MEX3B
NCAPD2
MRPL51
AGK
CDH2
PPIP5K1
CKMT1B
INTS7
DTL
LRIG1
NMNAT2
AKIRIN1
P4HA1
RRP8
ILK
TRPM3
LDLRAD2
KCNB1
SCRN3
CIR1
SPTBN4
BLVRB
PFDN4
ERG
PUS7L
IRAK4
SGCZ
FAM183A
CRYZL2P-SEC16B
USP53
CCNL1
IL20
PTPN21
ARMH3
TTI2
RBPJL
MATN4
TAF1D
C11orf54
HUS1
GRIA2
TMEM17
HS3ST2
PF4
PPBP
PDE4C
SQLE
PFKFB4
LHFPL4
SLC25A45
FRMD8
MAF
GJA10
USP12
SIPA1L2
MXI1
NDUFS7
CARD8
STT3A
RGMB
NFAM1
ZNF554
KDM5B
FAM149B1
ECD
KDM6B
TBC1D19
NTSR2
TIMM22
TAF6L
LTB
ABCB10
PRICKLE1
XKR4
ENOSF1
TMED7-TICAM2
TMED7
C16orf92
AXL
KIAA1586
CCDC77
KDM5A
CAND1
CBFA2T2
PARP6
MRPS2
C9orf116
ZNF581
CCDC106
STARD10
SCRT1
COA1
DUX4
FAM161B
COQ6
ZNF785
AGRN
MRS2
CTXN2
LRP12
PHF12
RGPD2
RGPD1
TRAPPC6A
BLOC1S3
NSUN4
SRSF11
COL25A1
GDAP1
GOLGA5
POLR3H
SEC24B
ROR1
PIGF
CRIPT
RTN4
HIP1
TTC6
FOXA1
NTRK2
GLI4
KCNH4
HCRT
GOLGA8B
ACTN1
CNN3
CD320
LIN28B
METTL11B
CYB5A
TBC1D30
SRF
SLC35F4
CSK
ZNF142
BCS1L
TRIM16
C3orf33
SERP1
EIF2A
FAM50B
AMOTL1
UNC5D
NME1
RBM28
OTUD1
VANGL2
HMGB1
USPL1
BNIP3L
AMZ2
SMG5
EEF2K
TMEM79
NOP53
NAPA
GRM1
ZNF839
ACADM
LRRC59
MMP24
THAP10
LRRC49
TPM1
SPCS3
CD274
OR5AR1
N6AMT1
MAGEB10
L3MBTL4
KRTDAP
SKA3
MRPL57
CHST8
SRXN1
CUL5
ZC3H4
GFPT1
OLFM1
PAPLN
RPS19
DRG2
MANEAL
CBX2
RFX4
FBLL1
SNAP25
CERCAM
CPPED1
NRXN1
FAM177B
RTEL1
STMN3
SMIM5
MOK
NLE1
FOXJ3
LIX1L
TRIM45
RPL26
NAV2
CHAMP1
TPT1
PLK1
SLC25A22
ZSCAN5A
ZNRF2
ENPP1
ZC3H15
TRIM48
FAM184A
NUDT10
TMED9
MIGA1
STIM2
CDKN1A
ESYT2
ECSIT
NME2
RAP2A
SEMA6D
EIF1AD
BANF1
PIP5K1A
DENND1B
WBP1
INO80B
NDUFC2-KCTD14
NDUFC2
ZSWIM8
CHCHD1
SMAD3
ZNF843
PSEN2
CALM1
BTF3
DSN1
RAN
CKMT1A
INO80C
DNMT3A
TPD52L1
PENK
GOLGA6D
F10
SVIP
MAD2L2
SOD1
PEAK1
HMG20A
ZEB2
WNT1
DCAF1
GCNT2
SNCG
MMRN2
SRRM3
CDC7
TTC23L
MTCL1
RRP12
ANKHD1-EIF4EBP3
ANKHD1
BLCAP
UBOX5
FASTKD5
LOC100421372
HSPA14
CDNF
YPEL2
DNAH2
TTC26
PGBD5
CDT1
POLR2J2
ZFYVE1
GSTP1
IQGAP2
RASGRP1
CARMIL3
PCSK2
SPAST
ATP5PO
GHSR
UTP20
GLRA1
CCDC88A
FAM98A
DHRS13
RPSA
GUK1
DGKE
C17orf67
PDE2A
SYT5
TCF4
RHBDD1
KCNS2
NECAB2
RASSF8
CLDN9
NFIB
DDX19B
PTGER1
CNBP
FXR1
IL12B
PWWP2A
GNAI2
DRD2
PARP1
INPP5K
TTC13
ARV1
MTHFD1
PRMT8
ANKRD50
RNF126
TYW1B
DPEP2
RBPJ
FADS2
FADS1
GPATCH8
SLC35F1
ZCWPW1
MEPCE
NOXA1
ZP3
POLR3G
MBLAC2
SH3BGR
LCA5L
KCNH1
NCAM1
PIPOX
CDH10
MTF2
ADCYAP1
UBE2R2
PRSS27
OSBPL1A
NWD2
PRRC2B
SEC31A
THAP9
EBNA1BP2
CFAP57
ASMTL
CTCF
SCG3
STXBP3
HIPK1
RIOK1
CAGE1
FLCN
KIAA1522
ZFP1
ACSM6
HIBADH
RAB4A
INTS8
CALHM6
CSNK1G2
CHST6
RXFP3
TEFM
IER5L
NPDC1
AFF1
ZNF234
RBM7
C11orf71
HBM
WNT2B
HBA2
ZBBX
POLA2
USP25
ECHDC1
CUX2
MTFR2
HDAC2
OGDHL
IFRD1
GABRG2
SLC17A6
ZNF782
NTNG1
LINGO2
OR51H1
UTP3
DAGLA
CRYBG1
EPRS1
PACSIN2
GPR6
CDC37L1
MSRB3
MSMP
UNC45A
HDDC3
GABRA1
ZBED6CL
KLHL32
NDUFAF4
CDK7
THEM6
FBXO46
NSUN3
DHFR2
NXPH1
REV3L
FABP6
ATL1
C1QBP
SMARCA4
RBFOX2
TRIM16L
FASTKD1
CHCHD6
JPT1
GRAMD2B
CETN3
VAMP8
COMMD2
MTMR6
PDPR
FBXL19
TEX19
C16orf72
TBC1D5
PRDM1
ARHGEF38
ERFL
MTERF4
SHQ1
CNOT4
ZNF791
ZNF490
RBM8A
TNFRSF18
MESP1
F2RL1
POLR2J3
FBXO4
NADK2
RAB3A
CDH24
PRAM1
FANCC
CFAP65
TLR5
GJA1
D2HGDH
GLIPR1L1
CAPS2
SKP2
LMBRD2
TUBA1B
HDGFL3
LENG8
MARCHF8
ATP6V0D1
AGRP
IGF2BP3
APBB2
TARBP2
MAP3K12
MMP9
CAMSAP2
EIF5A
IRF3
BCL2L12
TMEM200B
HUNK
EIF2B3
MIS18BP1
ANKRD34C
RPS24
POLR3A
ZNF799
RWDD3
C3orf14
PRUNE2
HNRNPR
FBXO33
RHOU
LRRTM3
TMEM221
COX16
NPM1
PAAF1
HOMEZ
ZSCAN9
COA4
SLC10A7
ZNF385A
DEF8
SPRED1
SERPING1
CHGB
RABL2B
PPP6R1
ENTPD4
NEK10
TTC21B
KDSR
THBS3
MTX1
BHLHA9
ZNF135
YARS1
S100PBP
EMILIN2
CYP27C1
GOT2
ERBB2
IRS1
MKKS
SLX4IP
SLC44A5
SOX14
CCDC92
ZNF664-RFLNA
ZNF664
INTS5
IGSF9
WWC3
RNF115
POLR3C
MTRES1
ESRP1
MRPS18C
HELQ
ATXN2L
GNB4
TIMM21
FBXO15
STK11IP
GALK1
ANAPC11
USP38
DPEP3
ALYREF
INTS12
GSTCD
PLEKHM3
FBXO5
CAPN7
ST3GAL3
CASP7
LMBR1L
BARHL1
NUP35
SEC22B
FBXL13
ARMC10
LRWD1
ALKBH4
TLCD4-RWDD3
TLCD4
STON1-GTF2A1L
GDPD5
NDUFA4
CLINT1
STON1
MTMR7
LBP
BEND3
RAPGEF6
SLC7A5
ZSCAN12
DPP6
TCAF1
FRS2
SRRM4
NAGPA
SPAAR
FOXP1
NOLC1
STK19
DXO
SEZ6L2
ASPHD1
CDC37
CTDP1
CHST11
KIF22
RMDN2
AFTPH
LPCAT4
ZNF524
FIZ1
MARCKS
FILIP1L
OTX2
RAP1GAP
AUNIP
DCAKD
NMT1
GCLC
PGAP2
FNDC5
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SLC25A40
DBF4
DST
SYT14
MFF
FAM76A
KCNK9
ZCWPW2
AZI2
FAM124A
DNAJC13
ROPN1B
MFSD1
ARHGEF12
ATRN
BRMS1L
INA
CDK14
SMOC1
SPN
UTP11
PCSK1
TRIM38
SLC52A1
SPATA45
GPC4
UTP25
TSR3
GNPTG
COL23A1
ACTG1
GDAP1L1
IER3
FLOT1
KRTAP5-6
BOLL
EPN1
FAM133B
ING3
MCM10
TESMIN
SHCBP1L
SCNM1
LYSMD1
EFHC1
HNRNPA1L2
MSH2
HDGF
MTHFR
CLCN6
CAB39L
SYNJ1
PARP2
SLC16A3
CSAD
ENO1
ZNF740
GNPDA2
ESD
TMEM114
IPP
FLYWCH2
COL21A1
ST18
MRPL40
HIRA
DISP2
ELAPOR1
TMEM60
PHTF2
C1orf194
SELENOP
TRIML2
SST
TOX4
RAB2B
NPIPB9
CCDC97
SYP
SPATA6L
PLPP6
DENND6B
ZNF667
DRG1
SLK
CELF4
KDELR2
DEPP1
C14orf39
CD109
CCDC86
CRH
COBLL1
MYT1
H3-3B
LTBR
ELL2
C2CD4A
EDEM1
SCNN1A
RAD51AP2
GJD2
TMEM271
FANCD2
CRNKL1
CFAP61
ATG5
SECISBP2L
RPS6KA4
COMT
WDR90
TAF1B
MRGBP