ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100390 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◣ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

ASF1A
NPAS4
LARP1
MARCHF4
SNX1
WDR74
KDM2A
TDRD7
GSN
RAB14
ZEB1
SDHB
MAP2
DNAJC5
RABGAP1L
SLC35A4
APBB3
XKR7
VIM
POM121
GPR158
C2orf42
GPAT4
RAB18
DDX18
UBFD1
EARS2
NEUROD4
STEAP2
DHDDS
SELENOM
TPH2
CENPF
PIKFYVE
STAG1
PPM1B
RAB6A
TMEM161B
KXD1
ULK2
DNPEP
CFAP20
TMEM170B
AHCYL2
RGL1
ARPC5
ZNF546
IFT46
C22orf34
EPHA10
KCNH6
ADAMTS17
PARD6B
UBP1
MAPK8IP2
CYB5R4
MPP5
CAMK4
CELSR3
CCDC107
PABPC4
TM7SF2
TXLNA
YTHDF2
MTFR1
LOC100289561
EEF1A1
CAMTA1
EEPD1
CPLX2
DCUN1D2
NEIL3
KDM1A
ELL
ARHGEF17
KIAA0895
PKDCC
PGAM5
HTR5A
HSPA9
SNX16
ZAR1L
BRCA2
TIPARP
KHK
ARHGEF10
SLC6A6
IQSEC3
ANKAR
FKBP7
ZNF677
MEI4
ANXA5
DOT1L
ZNF555
CABP1
SCAF1
TNC
PDE1C
C2CD5
NUP58
MZT1
BORA
CATSPERE
PHF1
ARPC2
MRPL48
IFFO1
ZSWIM6
POLDIP3
CARTPT
ANTXR1
CPNE9
TMEM41B
TTLL4
SVOP
SOD2
WTAP
HNRNPH1
PPDPF
FSD1L
WDR36
RBM4B
EIF5B
TXNDC9
PXK
FAM227B
DTWD1
KCTD18
FRMD3
GBA
ANKRD31
MTDH
CDC73
COPS7B
NPPB
HOOK1
MTRNR2L2
SYT17
FGF12
FDPS
RPAP3
DDIT3
HPCA
PSMD6
RGS9
RSU1
CPVL
SMIM30
MAML3
ANAPC5
WTIP
C17orf49
TMEM272
NF1
ZNF77
WASHC2C
XPO1
REEP5
ASB6
PIP4K2B
SCN3B
SMIM12
WWC2
OGDH
EHBP1
FZR1
MTRNR2L8
SMIM14
RAB37
NSUN6
ENTPD8
PSMD3
MACROD2
WASHC2A
PRKRA
PJVK
CHST10
MARCHF7
CXXC4
NDEL1
SLC39A3
CALR
PAQR3
USP54
CBLL1
WWC1
SMG7
SPG21
OVOL2
PSMC4
EPHB1
CLN8
ACVR1
DIAPH1
LSM14B
ANKRD12
ZNF594
LNPEP
SAR1A
FBRS
GOLGA7
SCML1
CPEB4
ARID2
U2AF1L5
U2AF1
PDXK
LRRC71
KHDRBS1
NCAPD2
MRPL51
MEX3B
AGK
CDH2
CKMT1B
INTS7
DTL
AKIRIN1
P4HA1
RRP8
ILK
TRPM3
KCNB1
SCRN3
CIR1
PFDN4
ERG
PUS7L
IRAK4
SGCZ
FAM183A
CRYZL2P-SEC16B
USP53
CCNL1
IL20
ARMH3
TTI2
RBPJL
TAF1D
C11orf54
HUS1
GRIA2
TMEM17
HS3ST2
PDE4C
SQLE
PFKFB4
FRMD8
MAF
GJA10
USP12
SIPA1L2
NDUFS7
STT3A
NFAM1
ZNF554
KDM5B
FAM149B1
ECD
TBC1D19
NTSR2
TIMM22
ABCB10
PRICKLE1
XKR4
ENOSF1
TMED7-TICAM2
TMED7
AXL
KIAA1586
CCDC77
KDM5A
CAND1
CBFA2T2
PARP6
MRPS2
C9orf116
CCDC106
STARD10
SCRT1
COA1
FAM161B
COQ6
ZNF785
MRS2
CTXN2
LRP12
RGPD2
RGPD1
TRAPPC6A
BLOC1S3
NSUN4
SRSF11
COL25A1
GDAP1
GOLGA5
POLR3H
SEC24B
PIGF
CRIPT
RTN4
HIP1
GLI4
KCNH4
GOLGA8B
ACTN1
CNN3
CD320
LIN28B
METTL11B
CYB5A
SRF
SLC35F4
ZNF142
BCS1L
CSK
TRIM16
C3orf33
SERP1
EIF2A
FAM50B
AMOTL1
UNC5D
NME1
RBM28
OTUD1
VANGL2
HMGB1
USPL1
AMZ2
BNIP3L
EEF2K
SMG5
NAPA
GRM1
ACADM
LRRC59
MMP24
THAP10
LRRC49
TPM1
SPCS3
CD274
N6AMT1
L3MBTL4
SKA3
MRPL57
CHST8
SRXN1
CUL5
ZC3H4
GFPT1
RPS19
DRG2
MANEAL
CBX2
RFX4
FBLL1
SNAP25
CERCAM
CPPED1
STMN3
SMIM5
MOK
NLE1
LIX1L
FOXJ3
TRIM45
RPL26
CHAMP1
TPT1
PLK1
SLC25A22
ZSCAN5A
ZNRF2
ENPP1
ZC3H15
FAM184A
NUDT10
MIGA1
TMED9
ESYT2
ECSIT
NME2
RAP2A
SEMA6D
EIF1AD
BANF1
PIP5K1A
DENND1B
INO80B
NDUFC2-KCTD14
NDUFC2
ZSWIM8
ZNF843
RGMB
PSEN2
BTF3
DSN1
RAN
CKMT1A
INO80C
DNMT3A
TPD52L1
SVIP
SOD1
PEAK1
HMG20A
DCAF1
GCNT2
WNT1
SRRM3
CDC7
TTC23L
MTCL1
RRP12
ANKHD1-EIF4EBP3
ANKHD1
UBOX5
FASTKD5
LOC100421372
HSPA14
CDNF
YPEL2
DNAH2
TTC26
PGBD5
CDT1
ZFYVE1
IQGAP2
GSTP1
RASGRP1
CARMIL3
PCSK2
SPAST
ATP5PO
UTP20
GLRA1
CCDC88A
FAM98A
DHRS13
DGKE
C17orf67
GUK1
SYT5
TCF4
RHBDD1
KCNS2
NECAB2
DDX19B
NFIB
FXR1
CNBP
IL12B
PWWP2A
DRD2
PARP1
INPP5K
TTC13
ARV1
GNAI2
ANKRD50
RNF126
DPEP2
RBPJ
FADS2
FADS1
GPATCH8
SLC35F1
ZCWPW1
MEPCE
NOXA1
SH3BGR
LCA5L
KCNH1
NCAM1
PIPOX
CDH10
MTF2
ADCYAP1
UBE2R2
OSBPL1A
NWD2
SEC31A
THAP9
EBNA1BP2
CFAP57
ASMTL
PRRC2B
CTCF
SCG3
STXBP3
RIOK1
CAGE1
FLCN
HIPK1
ZFP1
HIBADH
RAB4A
INTS8
CALHM6
CSNK1G2
RXFP3
CHST6
TEFM
NPDC1
ZNF234
RBM7
C11orf71
ZBBX
POLA2
WNT2B
ECHDC1
AFF1
USP25
CUX2
MTFR2
HDAC2
OGDHL
IFRD1
GABRG2
SLC17A6
LINGO2
OR51H1
UTP3
EPRS1
CRYBG1
GPR6
DAGLA
MSRB3
HDDC3
CDC37L1
GABRA1
ZBED6CL
NDUFAF4
KLHL32
CDK7
THEM6
NSUN3
DHFR2
NXPH1
FABP6
ATL1
C1QBP
FASTKD1
CHCHD6
GRAMD2B
JPT1
CETN3
SMARCA4
RBFOX2
COMMD2
MTMR6
PDPR
FBXL19
TEX19
C16orf72
TBC1D5
MTERF4
SHQ1
CNOT4
ZNF791
ZNF490
RBM8A
MESP1
F2RL1
POLR2J3
FBXO4
NADK2
RAB3A
FANCC
TLR5
CFAP65
D2HGDH
TUBA1B
SKP2
LMBRD2
GLIPR1L1
LENG8
HDGFL3
MARCHF8
ATP6V0D1
IGF2BP3
CAMSAP2
MAP3K12
EIF5A
BCL2L12
TMEM200B
EIF2B3
MIS18BP1
ANKRD34C
ZNF799
RWDD3
RPS24
C3orf14
PRUNE2
HNRNPR
FBXO33
RHOU
LRRTM3
TMEM221
COX16
NPM1
HOMEZ
PAAF1
COA4
ZSCAN9
SLC10A7
DEF8
SPRED1
SERPING1
CHGB
PPP6R1
RABL2B
TTC21B
KDSR
NEK10
THBS3
ZNF135
YARS1
S100PBP
GOT2
IRS1
SLX4IP
CCDC92
INTS5
IGSF9
WWC3
RNF115
POLR3C
MTRES1
ESRP1
MRPS18C
HELQ
ATXN2L
GNB4
TIMM21
FBXO15
STK11IP
GALK1
USP38
ANAPC11
ALYREF
DPEP3
INTS12
GSTCD
PLEKHM3
FBXO5
CAPN7
ST3GAL3
CASP7
LMBR1L
BARHL1
NUP35
FBXL13
ARMC10
LRWD1
ALKBH4
NDUFA4
GDPD5
TLCD4
TLCD4-RWDD3
MTMR7
STON1-GTF2A1L
STON1
BEND3
RAPGEF6
ZSCAN12
SRRM4
NAGPA
NOLC1
STK19
DXO
SEZ6L2
ASPHD1
CDC37
CTDP1
CHST11
KIF22
RMDN2
AFTPH
LPCAT4
ZNF524
FIZ1
FILIP1L
OTX2
DCAKD
NMT1
AUNIP
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SLC25A40
DBF4
DST
SYT14
FAM76A
ZCWPW2
AZI2
FAM124A
DNAJC13
MFSD1
ARHGEF12
ATRN
CDK14
BRMS1L
SMOC1
UTP11
TRIM38
GPC4
UTP25
TSR3
GNPTG
ACTG1
FLOT1
BOLL
FAM133B
ING3
MCM10
TESMIN
SCNM1
LYSMD1
HNRNPA1L2
MSH2
EFHC1
MTHFR
CLCN6
CAB39L
HDGF
SYNJ1
PARP2
SLC16A3
ZNF740
CSAD
GNPDA2
ESD
FLYWCH2
IPP
COL21A1
ST18
MRPL40
HIRA
DISP2
TMEM60
PHTF2
C1orf194
SST
TOX4
RAB2B
CCDC97
SYP
SPATA6L
PLPP6
DENND6B
ZNF667
DRG1
SLK
CELF4
C14orf39
KDELR2
CD109
CCDC86
CRH
COBLL1
H3-3B
C2CD4A
EDEM1
LTBR
RAD51AP2
ELL2
TMEM271
SCNN1A
FANCD2
CRNKL1
CFAP61
ATG5
SECISBP2L
TAF1B
WDR90
RILP
AK4
STRBP
PERP
RNF187
PSMD9
HPD
CLVS1
TIMM9
KIAA0586
WRNIP1
GTF2IRD2B
TMEFF2
PDE4DIP
MAN2C1
SIRT4
BFSP1
TP53I3
UIMC1
ZNF620
LZTS2
CAV1
LMBR1
NYAP1
IPO4
MRPL44
CYREN
SEC62
UNC80
COX18
LZTS3
OLFM3
SEZ6
STIM2
ST6GALNAC3
GPR55
PMAIP1
WDR11
CACNG3
ZNF410
ROBO3
CYSTM1
UNC13A
STK32C
LRRC27
SLC4A8
MRPS36
ZNF558
KLHL12
BICDL1
NUDC
AKAP11
CXCL5
PICALM
HEYL
DPF1
ZBTB40
CBLB
PTGR2
CIC
TMEM179
SH3GL3
NFE2L2
FBXO48
APLF
AEBP2
NUS1
CUL9
CAMLG
KCNK5
SPRY4
SLCO5A1
FBXO40
RND1
TRIOBP
CORO6
KLHL20
BBS5
LRP2BP
ANKRD37
SLC37A4
RBM27
SEC63
EBAG9
QTRT1
ZNF276
VPS9D1
LRRC37A3
PCOTH
MIPEP
NUP155
TMEM259
NFKBID
IL17RD
EID1
SLC36A4
TDRKH
PASD1
REV1
POT1
HEMK1
SUCLG1
FAM120B
IL17D
GDF3
NUDT15
TOMM5
SLC30A6
TTK
SPEF2
TMEM267
RBBP8NL
TMEM214
BBS9
TSPAN19
LRRIQ1
TRIM46
MYCBP2
C11orf52
CCDC117
SMC5
NCLN
KLHL8
TRAF3IP1
TOP3B
FAM207A
MTR
MRPL21
IGHMBP2
FH
PTPRN
PTPN4
UEVLD
NLRX1
GALE
IDE
MORF4L2
PCYT2
MARCHF6
KLRG2
TANC2
AFG3L2
RCN3
VPS50
HEPACAM2
TIMM17A
CRKL
ZNF331
MIPOL1
CUX1
SRRM1
ELOVL6
AHCY
ZNF786
DDHD2
GINM1
CHGA
PIK3R3
RPL39L
LRRC37B
WDR17
OBI1
CXCL3
GPRIN1
DYNC1I1
OLFML2A
RIPOR2
TMEM248
VTA1
NMBR
TAMM41
E2F6
IBA57
EIF2S1
ATP6V1D
KIFBP
PEX5L
RAD52
NPAT
ATM
FNIP2
MTA3
FRG1
NME7
BLZF1
PRLHR
PDCL
L3MBTL1
SF3A3
RGPD8
RGPD5
RUBCN
FYTTD1
ZGRF1
LARP7
NRSN1
RAP1GDS1
CNOT8
KLF5
PEX3
ADAT2
TATDN3
NSL1
PIEZO1
DNLZ
C16orf71
ANKS3
ATF6
USP4
FRYL
SMPD4
MZT2B
PRKCE
GJC1
NT5C3A
IGSF11
TENT5A
PDE11A
C1orf174
TMEM263