ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100251 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◣ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Pde1c
CycY
Cib2
CG1354
CARPB
Obp99d
Obp99b
Dup99B
CG15506
RapGAP1
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
HisRS
CG6481
CG6470
Bx
Ggt-1
CG31960
bark
Sox100B
dco
CG14974
CG10359
CG10357
CG3358
upd2
Tpst
CG46311
CG32633
shep
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
Aps
Wnt4
Gr89a
Decay
Cad89D
Mef2
Eip74EF
ind
CG43680
CG43679
CG43678
CG18581
CG13461
CG12310
sbr
htk
shop
InR
CG44439
CG14760
CG5568
CG18586
CG33120
CG31752
CG10600
sgll
CG34384
CG31473
CG2993
Tak1
CG42579
Sprn
CG5906
Nc73EF
Cpr73D
scyl
Zasp52
CG33465
N
pkaap
crp
CG17329
RpS21
CG3104
CG2991
CG12535
CG43693
pdgy
eag
CG9030
unc-5
CG12863
His3.3B
fh
Bap111
His2B:CG33910
His2B:CG33908
His2B:CG33906
His2B:CG33904
His2B:CG33902
His2B:CG33900
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33882
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
snu
Sid
CG33346
nrv2
CG43610
CG17376
RpS28a
Mgat2
Axn
CG4597
ush
His1:CG33813
His1:CG31617
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33852
His1:CG33807
His1:CG33819
His1:CG33810
His1:CG33861
His1:CG33858
His1:CG33855
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
CG14947
Sox21a
SNF4Agamma
HnRNP-K
CG5674
VhaAC39-2
unk
CG13829
Pzl
Lasp
Dab
CG43954
mthl14
E(bx)
CG14903
CG14891
Toll-7
phyl
Oaz
Usp30
CG16721
CG13689
muc
Liprin-gamma
CG11298
CG13970
SK
CkIIalpha-i3
CG13896
CG13895
Ubr1
raskol
CG14219
CG14218
CG14204
bcd
Ama
nxf4
CG43290
CG31496
CG8306
CG5089
CG12398
Twdlalpha
goe
Spn75F
fiz
CG14406
CG9512
shot
DJ-1alpha
CG42808
CG42807
Eaat2
Dop1R2
His1:CG33804
wgn
E(Pc)
DCX-EMAP
tara
SP555
CG14042
CG8180
His4:CG33881
His4:CG33879
His4:CG33877
ben
Ste12DOR
Ptpmeg2
CG3106
stl
CycB
Fancm
mtd
Tim17b1
Eglp2
IM18
Eglp3
Eglp1
CG43209
CG42560
CG42559
CG10332
CG32264
CG9220
kl-5
velo
dikar
CG34028
Burs
Tsp68C
Hml
CG8757
CG8750
CHES-1-like
CG15478
CG4020
CG12236
CG12617
Myd88
par-1
mRNA-cap
CG32599
out
CG3092
CG7573
Sfp36F
CG5790
CG43362
Irk1
fred
Pka-R2
CG12128
CG32450
Fbxl4
CG1434
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
His4:CG33869
CG15615
CG32295
wcy
CG4955
CG4949
Sytalpha
Oli
CG6870
CG14439
Ssk
CG11841
sov
CG11837
CG8112
CG12538
ver
nst
Gcn5
eIF2beta
CG6650
Ptip
endos
CG43291
CG9616
RpL37a
TfAP-2
scpr-B
scpr-A
CG5214
CG17734
Men
CG9896
TTLL4A
piwi
CG12253
sgg
ctrip
Hr78
Est-Q
SteXh:CG42398
Obp51a
Obp56g
TwdlE
lectin-28C
CG14535
PDZ-GEF
Npc2b
RagA-B
CG11970
CAHbeta
Pax
Lmpt
RtcB
CG13085
Alp12
Cul2
CG31191
Atpalpha
Bub1
Bsg25D
Pex7
Arr2
CG9304
CG34029
Gmap
CG12498
frac
CG14837
CG46193
TM4SF
CG4882
CG6220
CG11788
CG10444
CG9143
Abd-B
CG7956
CG13192
Nrt
CG42268
pzg
ppl
CG12974
RpS26
CG33557
CG2990
PK1-R
CG9920
CCHa1
Reg-2
CG13893
Adgf-E
CG34274
GstT2
CG12926
CG7329
pHCl-1
Rack1
mts
CG13690
ebi
AP-2alpha
Mvd
CG8944
CCT6
Maf1
CG11883
scra
CG1360
blow
Tango14
capt
CG5080
ZnT77C
ND-39
CG32425
CG18281
Stt3A
bves
RpL11
EloC
Arl6
ocm
CG4438
Ir11a
CG12986
CG10481
CG31909
mtSSB
CG6126
CG31287
caps
galectin
CG11374
sev
knk
gammaSnap2
ATPsynepsilonL
CG34313
CG32832
CG31743
His1:CG33816
Pomp
Moe
S
Atg4a
ast
Oda
Yif1
CG6425
amon
omd
flfl
Mst77Y-9
Mst77Y-4
adp
EMRE
CG5742
CG8860
EndoG
CCT5
Tif-IA
RpL21
waw
Sep1
bbx
gry
CG32276
CG14966
CG32271
CG33159
CG9215
CG8097
CG7872
cerv
Alp11
Idh3a
CoRest
pyd
sky
Eip78C
vis
CG42673
fdl
His4:CG33899
His4:CG33897
His4:CG33895
His4:CG33893
His4:CG33891
His4:CG33875
His4:CG33873
His4:CG33871
Tg
Glyat
CG12560
intr
spdo
SNRPG
RpS19a
Rok
mthl1
CG7460
CG6052
RpL5
CG17490
pwn
Incenp
Br140
sced
scpr-C
RpL3
CG6693
CG6689
CG17726
spag
DnaJ-60
CG42568
geminin
Opbp
abd-A
DNaseII
CG7794
CG7785
stg
SP1029
CG45544
CG42354
CG42353
CG7367
CG11151
CG32448
HUWE1
CG9281
CG15601
Gbeta76C
CG8765
Ste:CG33247
Ste:CG33245
Ste:CG33244
Ste:CG33240
Ste:CG33239
Ste:CG33237
Ste:CG33243
Ste:CG33242
Ste:CG33241
Ste:CG33238
Ste:CG33236
RpL36A
Megf8
CCDC53
AkhR
Aatf
CG6454
CG5746
Grip91
Nopp140
CG7148
mbo
Gnmt
CG43630
mus312
mrva
CG42307
Vago
Cyp313a4
CG2076
CG2061
Gale
CG3402
Or43a
Rev1
MED30
cmet
cana
CG8908
mal
CG11710
RpS18
plu
PCNA
Pp4-19C
CG15456
cactin
CG8252
CG30349
CCT8
kto
trc
CG32221
Eip63E
ImpE2
CG44623
CG10887
RpS28b
l(1)G0320
CG32700
CG15317
His2B:CG17949
His1:CG33831
His1:CG33828
His1:CG33825
His1:CG33822
Svil
Spn28Da
CG7102
CG33226
CG30287
CG30286
CG30283
CG43658
Loxl1
CG11334
CG11333
Or67d
can
TMS1
fax
RpL30
robl37BC
jb
Uba1
snRNP-U1-70K
smt3
Jupiter
RNASEK
eIF3f1
l(1)G0004
SmE
CG34132
mei-W68
CG7744
betaTub56D
CG6791
Syx16
HERC2
CG17270
stmA
CG8740
CG42615
CG30356
CG32110
RpS20
CG17272
CG17271
vls
lok
bwa
barr
Snap25
narya
wls
CG14142
Alg10
Adck5
Sf3a2
CG42588
mAcon1
CG43346
CG43345
CG31627
zip
uzip
Ist1
CG8549
His1:CG33801
Ent1
Wsck
Syx18
atl
CG17290
wda
CG13827
pnt
sbb
mRpS29
CG46442
rad50
l(2)10685
Neurl4
Frl
CG6833
CG13484
CG7900
Vps29
Tfb4
Fibp
Deaf1
toc
Prosalpha1
CG30382
CG18853
CG12822
Atg10
RpS4
Syx13
RhoGAP93B
CG7044
CG5745
p47
CG11141
CG11127
Rubicon
CAH3
prage
Adar
Pif1
Pgant4
CG31776
RpL37b
CG9876
CG42703
CG12009
RpS7
CecB
CecA2
CecA1
Anp
Spx
Rbcn-3A
nmdyn-D6
mRpS25
CG14414
Cpr67Fb
Gss2
Gss1
sle
CG12818
Bruce
eIF3j
CG12134
CG14410
RpL23
inaD
CG13531
VhaM9.7-b
Rpn10
ppk5
COX8
Kyat
glo
COX5A
RtGEF
La
Sgt
cass
BicD
st
CG42514
PTP-ER
mahj
CG12133
CG17834
CG1418
CG12702
lmgB
lmgA
Strip
PHGPx
CG14961
CG33290
eIF3e
CG9706
Flo2
Ir20a
CG32669
CG2202
CG17333
CG32590
CG14407
DNApol-eta
CG14562
GILT3
GILT2
eIF3d1
CG18754
CG16710
Map60
Magi
CG9406
CG1827
Urod
Smyd4-1
RpL31
CG12929
Xbp1
Hmg-2
CG15657
CG17145
CG6933
uri
Nurf-38
CG11414
mnb
CG6788
Toll-9
kin17
DNApol-alpha60
CG5665
eIF4A
ifc
CG43163
RpLP0
CG7133
CG7130
CG7139
Sfp79B
bor
asun
Ranbp21
Elys
ZnT86D
Tctp
SdhC
rtv
Lint-1
Dlic
Mp
Patj
RpS9
CG3408
CG33703
CG33702
SLIRP1
anox
Dd
CG1486
su(Hw)
RpII15
CG31321
Rhau
dia
Patr-1
CG5220
CG3995
CG18213
Rpt6
CG1801
lama
Klp64D
Cyt-c1
spn-F
qless
mRpL32
CG1750
CG46456
CAH16
Adhr
Adh
mRF1
CG9426
CAH6
Ski6
CG16812
snama
CG16786
CG15480
TM9SF4
CG43376
lqfR
JTBR
CG42676
CG13855
CG13850
Obp18a
CG34268
CG44666
CG43711
CG43710
CG43709
Sras
sinu
ScsbetaG
bc10
Cc2d2a
Patronin
eIF3b
r-l
dmrt93B
RPA2
Mtp
CG9272
Cp1
CG42806
grh
AGO1
Rpn13
RpL26
CG6843
CG3902
arx
MED4
Cdc27
RpS10b
CG14220
CCT7
Pif1A
Pif1B
hng2
CG9839
phr
CG30383
cathD
CG3662
dock
CG3862
CG12007
CG31275
mdy
CG13280
siz
Ldh
Pde8
CG9171
Spn
nej
mRpS33
CG31279
CG17565
CG14881
Prm
Fhos
CG13306
Indy
CG34260
CG14762
Spn28Db
lectin-46Cb
CG1648
for
beat-IIIc
CG43338
otp
CAH15
vir-1
CG6405
CG6388
CG5446
gol
Dys
CG15025
CG3546
CG3527
CG11444
CG11436
lace
Syn2
Cyp12e1
nAChRalpha6
Fkbp59
CG4537
CG34183
Mtpalpha
gcm
CG31709
RpS11
CG8858
CG1077
nau
CG10365
CG10232
Osi1
CG3556
CG14270
CG10804
CG10803
CG10802
Eh
CG1688
Gbs-76A
fal
Asator
flr
CG10222
Tsp
Nhe3
CG11327
Rlip
CG5697
Got1
Sfp84E
Os-C
CD98hc
CG13962
Pop2
Grip163
CG6928
BBS4
Wdr62
CG31663
CG15358
stc
CG15269
Cpr76Bc
Cpr76Bb
Cpr76Ba
CG9005
l(3)mbn
CG6118