Job ID = 6368896 SRX = SRX6619598 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-16T00:34:50 prefetch.2.10.7: 1) Downloading 'SRR9866011'... 2020-06-16T00:34:50 prefetch.2.10.7: Downloading via HTTPS... 2020-06-16T00:48:17 prefetch.2.10.7: HTTPS download succeed 2020-06-16T00:48:17 prefetch.2.10.7: 1) 'SRR9866011' was downloaded successfully 2020-06-16T00:48:17 prefetch.2.10.7: 'SRR9866011' has 0 unresolved dependencies Read 26070416 spots for SRR9866011/SRR9866011.sra Written 26070416 spots for SRR9866011/SRR9866011.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:01 Multiseed full-index search: 00:48:24 26070416 reads; of these: 26070416 (100.00%) were paired; of these: 12153726 (46.62%) aligned concordantly 0 times 11728620 (44.99%) aligned concordantly exactly 1 time 2188070 (8.39%) aligned concordantly >1 times ---- 12153726 pairs aligned concordantly 0 times; of these: 7442534 (61.24%) aligned discordantly 1 time ---- 4711192 pairs aligned 0 times concordantly or discordantly; of these: 9422384 mates make up the pairs; of these: 6820218 (72.38%) aligned 0 times 1254470 (13.31%) aligned exactly 1 time 1347696 (14.30%) aligned >1 times 86.92% overall alignment rate Time searching: 00:48:25 Overall time: 00:48:25 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 2255901 / 20755087 = 0.1087 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 11:00:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 11:00:56: #1 read tag files... INFO @ Tue, 16 Jun 2020 11:00:56: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 11:01:07: 1000000 INFO @ Tue, 16 Jun 2020 11:01:18: 2000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 11:01:26: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 11:01:26: #1 read tag files... INFO @ Tue, 16 Jun 2020 11:01:26: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 11:01:30: 3000000 INFO @ Tue, 16 Jun 2020 11:01:38: 1000000 INFO @ Tue, 16 Jun 2020 11:01:41: 4000000 INFO @ Tue, 16 Jun 2020 11:01:49: 2000000 INFO @ Tue, 16 Jun 2020 11:01:52: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 11:01:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 11:01:56: #1 read tag files... INFO @ Tue, 16 Jun 2020 11:01:56: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 11:02:01: 3000000 INFO @ Tue, 16 Jun 2020 11:02:04: 6000000 INFO @ Tue, 16 Jun 2020 11:02:08: 1000000 INFO @ Tue, 16 Jun 2020 11:02:12: 4000000 INFO @ Tue, 16 Jun 2020 11:02:16: 7000000 INFO @ Tue, 16 Jun 2020 11:02:20: 2000000 INFO @ Tue, 16 Jun 2020 11:02:24: 5000000 INFO @ Tue, 16 Jun 2020 11:02:28: 8000000 INFO @ Tue, 16 Jun 2020 11:02:31: 3000000 INFO @ Tue, 16 Jun 2020 11:02:36: 6000000 INFO @ Tue, 16 Jun 2020 11:02:39: 9000000 INFO @ Tue, 16 Jun 2020 11:02:43: 4000000 INFO @ Tue, 16 Jun 2020 11:02:48: 7000000 INFO @ Tue, 16 Jun 2020 11:02:52: 10000000 INFO @ Tue, 16 Jun 2020 11:02:55: 5000000 INFO @ Tue, 16 Jun 2020 11:03:00: 8000000 INFO @ Tue, 16 Jun 2020 11:03:04: 11000000 INFO @ Tue, 16 Jun 2020 11:03:07: 6000000 INFO @ Tue, 16 Jun 2020 11:03:12: 9000000 INFO @ Tue, 16 Jun 2020 11:03:17: 12000000 INFO @ Tue, 16 Jun 2020 11:03:19: 7000000 INFO @ Tue, 16 Jun 2020 11:03:24: 10000000 INFO @ Tue, 16 Jun 2020 11:03:30: 13000000 INFO @ Tue, 16 Jun 2020 11:03:30: 8000000 INFO @ Tue, 16 Jun 2020 11:03:37: 11000000 INFO @ Tue, 16 Jun 2020 11:03:42: 9000000 INFO @ Tue, 16 Jun 2020 11:03:43: 14000000 INFO @ Tue, 16 Jun 2020 11:03:50: 12000000 INFO @ Tue, 16 Jun 2020 11:03:55: 10000000 INFO @ Tue, 16 Jun 2020 11:03:56: 15000000 INFO @ Tue, 16 Jun 2020 11:04:04: 13000000 INFO @ Tue, 16 Jun 2020 11:04:07: 11000000 INFO @ Tue, 16 Jun 2020 11:04:10: 16000000 INFO @ Tue, 16 Jun 2020 11:04:17: 14000000 INFO @ Tue, 16 Jun 2020 11:04:20: 12000000 INFO @ Tue, 16 Jun 2020 11:04:23: 17000000 INFO @ Tue, 16 Jun 2020 11:04:31: 15000000 INFO @ Tue, 16 Jun 2020 11:04:34: 13000000 INFO @ Tue, 16 Jun 2020 11:04:36: 18000000 INFO @ Tue, 16 Jun 2020 11:04:44: 16000000 INFO @ Tue, 16 Jun 2020 11:04:47: 14000000 INFO @ Tue, 16 Jun 2020 11:04:50: 19000000 INFO @ Tue, 16 Jun 2020 11:04:57: 17000000 INFO @ Tue, 16 Jun 2020 11:05:01: 15000000 INFO @ Tue, 16 Jun 2020 11:05:03: 20000000 INFO @ Tue, 16 Jun 2020 11:05:11: 18000000 INFO @ Tue, 16 Jun 2020 11:05:14: 16000000 INFO @ Tue, 16 Jun 2020 11:05:16: 21000000 INFO @ Tue, 16 Jun 2020 11:05:24: 19000000 INFO @ Tue, 16 Jun 2020 11:05:28: 17000000 INFO @ Tue, 16 Jun 2020 11:05:29: 22000000 INFO @ Tue, 16 Jun 2020 11:05:38: 20000000 INFO @ Tue, 16 Jun 2020 11:05:41: 18000000 INFO @ Tue, 16 Jun 2020 11:05:43: 23000000 INFO @ Tue, 16 Jun 2020 11:05:51: 21000000 INFO @ Tue, 16 Jun 2020 11:05:55: 19000000 INFO @ Tue, 16 Jun 2020 11:05:56: 24000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 11:06:04: 22000000 INFO @ Tue, 16 Jun 2020 11:06:08: 20000000 INFO @ Tue, 16 Jun 2020 11:06:09: 25000000 INFO @ Tue, 16 Jun 2020 11:06:18: 23000000 INFO @ Tue, 16 Jun 2020 11:06:21: 21000000 INFO @ Tue, 16 Jun 2020 11:06:23: 26000000 INFO @ Tue, 16 Jun 2020 11:06:31: 24000000 INFO @ Tue, 16 Jun 2020 11:06:34: 22000000 INFO @ Tue, 16 Jun 2020 11:06:36: 27000000 INFO @ Tue, 16 Jun 2020 11:06:44: 25000000 INFO @ Tue, 16 Jun 2020 11:06:47: 23000000 INFO @ Tue, 16 Jun 2020 11:06:49: 28000000 INFO @ Tue, 16 Jun 2020 11:06:58: 26000000 INFO @ Tue, 16 Jun 2020 11:07:01: 24000000 INFO @ Tue, 16 Jun 2020 11:07:02: 29000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 11:07:11: 27000000 INFO @ Tue, 16 Jun 2020 11:07:14: 25000000 INFO @ Tue, 16 Jun 2020 11:07:16: 30000000 INFO @ Tue, 16 Jun 2020 11:07:24: 28000000 INFO @ Tue, 16 Jun 2020 11:07:27: 26000000 INFO @ Tue, 16 Jun 2020 11:07:29: 31000000 INFO @ Tue, 16 Jun 2020 11:07:37: 29000000 INFO @ Tue, 16 Jun 2020 11:07:40: 27000000 INFO @ Tue, 16 Jun 2020 11:07:42: 32000000 INFO @ Tue, 16 Jun 2020 11:07:51: 30000000 INFO @ Tue, 16 Jun 2020 11:07:54: 28000000 INFO @ Tue, 16 Jun 2020 11:07:55: 33000000 INFO @ Tue, 16 Jun 2020 11:08:04: 31000000 INFO @ Tue, 16 Jun 2020 11:08:07: 29000000 INFO @ Tue, 16 Jun 2020 11:08:08: 34000000 INFO @ Tue, 16 Jun 2020 11:08:17: 32000000 INFO @ Tue, 16 Jun 2020 11:08:19: 30000000 INFO @ Tue, 16 Jun 2020 11:08:21: 35000000 INFO @ Tue, 16 Jun 2020 11:08:30: 33000000 INFO @ Tue, 16 Jun 2020 11:08:32: 31000000 INFO @ Tue, 16 Jun 2020 11:08:34: 36000000 INFO @ Tue, 16 Jun 2020 11:08:43: 34000000 INFO @ Tue, 16 Jun 2020 11:08:45: 32000000 INFO @ Tue, 16 Jun 2020 11:08:47: 37000000 INFO @ Tue, 16 Jun 2020 11:08:56: 35000000 INFO @ Tue, 16 Jun 2020 11:08:59: 33000000 INFO @ Tue, 16 Jun 2020 11:09:00: 38000000 INFO @ Tue, 16 Jun 2020 11:09:09: 36000000 INFO @ Tue, 16 Jun 2020 11:09:12: 34000000 INFO @ Tue, 16 Jun 2020 11:09:13: 39000000 INFO @ Tue, 16 Jun 2020 11:09:22: 37000000 INFO @ Tue, 16 Jun 2020 11:09:26: 35000000 INFO @ Tue, 16 Jun 2020 11:09:26: 40000000 INFO @ Tue, 16 Jun 2020 11:09:35: 38000000 INFO @ Tue, 16 Jun 2020 11:09:36: #1 tag size is determined as 150 bps INFO @ Tue, 16 Jun 2020 11:09:36: #1 tag size = 150 INFO @ Tue, 16 Jun 2020 11:09:36: #1 total tags in treatment: 12348095 INFO @ Tue, 16 Jun 2020 11:09:36: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 11:09:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 11:09:37: #1 tags after filtering in treatment: 10853819 INFO @ Tue, 16 Jun 2020 11:09:37: #1 Redundant rate of treatment: 0.12 INFO @ Tue, 16 Jun 2020 11:09:37: #1 finished! INFO @ Tue, 16 Jun 2020 11:09:37: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 11:09:37: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 11:09:37: #2 number of paired peaks: 314 WARNING @ Tue, 16 Jun 2020 11:09:37: Fewer paired peaks (314) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 314 pairs to build model! INFO @ Tue, 16 Jun 2020 11:09:37: start model_add_line... INFO @ Tue, 16 Jun 2020 11:09:37: start X-correlation... INFO @ Tue, 16 Jun 2020 11:09:37: end of X-cor INFO @ Tue, 16 Jun 2020 11:09:37: #2 finished! INFO @ Tue, 16 Jun 2020 11:09:37: #2 predicted fragment length is 207 bps INFO @ Tue, 16 Jun 2020 11:09:37: #2 alternative fragment length(s) may be 207 bps INFO @ Tue, 16 Jun 2020 11:09:37: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.05_model.r WARNING @ Tue, 16 Jun 2020 11:09:37: #2 Since the d (207) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 11:09:37: #2 You may need to consider one of the other alternative d(s): 207 WARNING @ Tue, 16 Jun 2020 11:09:37: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 11:09:37: #3 Call peaks... INFO @ Tue, 16 Jun 2020 11:09:37: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 11:09:39: 36000000 INFO @ Tue, 16 Jun 2020 11:09:48: 39000000 INFO @ Tue, 16 Jun 2020 11:09:52: 37000000 INFO @ Tue, 16 Jun 2020 11:10:00: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 11:10:00: 40000000 INFO @ Tue, 16 Jun 2020 11:10:05: 38000000 INFO @ Tue, 16 Jun 2020 11:10:10: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.05_peaks.xls INFO @ Tue, 16 Jun 2020 11:10:10: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.05_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 11:10:10: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.05_summits.bed INFO @ Tue, 16 Jun 2020 11:10:10: Done! INFO @ Tue, 16 Jun 2020 11:10:11: #1 tag size is determined as 150 bps INFO @ Tue, 16 Jun 2020 11:10:11: #1 tag size = 150 INFO @ Tue, 16 Jun 2020 11:10:11: #1 total tags in treatment: 12348095 INFO @ Tue, 16 Jun 2020 11:10:11: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 11:10:11: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (434 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 11:10:11: #1 tags after filtering in treatment: 10853819 INFO @ Tue, 16 Jun 2020 11:10:11: #1 Redundant rate of treatment: 0.12 INFO @ Tue, 16 Jun 2020 11:10:11: #1 finished! INFO @ Tue, 16 Jun 2020 11:10:11: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 11:10:11: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 11:10:12: #2 number of paired peaks: 314 WARNING @ Tue, 16 Jun 2020 11:10:12: Fewer paired peaks (314) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 314 pairs to build model! INFO @ Tue, 16 Jun 2020 11:10:12: start model_add_line... INFO @ Tue, 16 Jun 2020 11:10:12: start X-correlation... INFO @ Tue, 16 Jun 2020 11:10:12: end of X-cor INFO @ Tue, 16 Jun 2020 11:10:12: #2 finished! INFO @ Tue, 16 Jun 2020 11:10:12: #2 predicted fragment length is 207 bps INFO @ Tue, 16 Jun 2020 11:10:12: #2 alternative fragment length(s) may be 207 bps INFO @ Tue, 16 Jun 2020 11:10:12: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.10_model.r WARNING @ Tue, 16 Jun 2020 11:10:12: #2 Since the d (207) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 11:10:12: #2 You may need to consider one of the other alternative d(s): 207 WARNING @ Tue, 16 Jun 2020 11:10:12: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 11:10:12: #3 Call peaks... INFO @ Tue, 16 Jun 2020 11:10:12: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 11:10:17: 39000000 INFO @ Tue, 16 Jun 2020 11:10:28: 40000000 INFO @ Tue, 16 Jun 2020 11:10:34: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 11:10:37: #1 tag size is determined as 150 bps INFO @ Tue, 16 Jun 2020 11:10:37: #1 tag size = 150 INFO @ Tue, 16 Jun 2020 11:10:37: #1 total tags in treatment: 12348095 INFO @ Tue, 16 Jun 2020 11:10:37: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 11:10:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 11:10:37: #1 tags after filtering in treatment: 10853819 INFO @ Tue, 16 Jun 2020 11:10:37: #1 Redundant rate of treatment: 0.12 INFO @ Tue, 16 Jun 2020 11:10:37: #1 finished! INFO @ Tue, 16 Jun 2020 11:10:37: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 11:10:37: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 11:10:38: #2 number of paired peaks: 314 WARNING @ Tue, 16 Jun 2020 11:10:38: Fewer paired peaks (314) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 314 pairs to build model! INFO @ Tue, 16 Jun 2020 11:10:38: start model_add_line... INFO @ Tue, 16 Jun 2020 11:10:38: start X-correlation... INFO @ Tue, 16 Jun 2020 11:10:38: end of X-cor INFO @ Tue, 16 Jun 2020 11:10:38: #2 finished! INFO @ Tue, 16 Jun 2020 11:10:38: #2 predicted fragment length is 207 bps INFO @ Tue, 16 Jun 2020 11:10:38: #2 alternative fragment length(s) may be 207 bps INFO @ Tue, 16 Jun 2020 11:10:38: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.20_model.r WARNING @ Tue, 16 Jun 2020 11:10:38: #2 Since the d (207) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 11:10:38: #2 You may need to consider one of the other alternative d(s): 207 WARNING @ Tue, 16 Jun 2020 11:10:38: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 11:10:38: #3 Call peaks... INFO @ Tue, 16 Jun 2020 11:10:38: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 11:10:45: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.10_peaks.xls INFO @ Tue, 16 Jun 2020 11:10:45: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.10_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 11:10:45: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.10_summits.bed INFO @ Tue, 16 Jun 2020 11:10:45: Done! pass1 - making usageList (7 chroms): 0 millis pass2 - checking and writing primary data (299 records, 4 fields): 1 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 11:11:00: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 11:11:11: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.20_peaks.xls INFO @ Tue, 16 Jun 2020 11:11:11: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.20_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 11:11:11: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX6619598/SRX6619598.20_summits.bed INFO @ Tue, 16 Jun 2020 11:11:11: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (213 records, 4 fields): 1 millis CompletedMACS2peakCalling