Job ID = 6368890 SRX = SRX6619592 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-16T00:34:43 prefetch.2.10.7: 1) Downloading 'SRR9866017'... 2020-06-16T00:34:43 prefetch.2.10.7: Downloading via HTTPS... 2020-06-16T00:50:21 prefetch.2.10.7: HTTPS download succeed 2020-06-16T00:50:21 prefetch.2.10.7: 1) 'SRR9866017' was downloaded successfully 2020-06-16T00:50:21 prefetch.2.10.7: 'SRR9866017' has 0 unresolved dependencies Read 29210179 spots for SRR9866017/SRR9866017.sra Written 29210179 spots for SRR9866017/SRR9866017.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:21:03 29210179 reads; of these: 29210179 (100.00%) were paired; of these: 9832718 (33.66%) aligned concordantly 0 times 14063139 (48.14%) aligned concordantly exactly 1 time 5314322 (18.19%) aligned concordantly >1 times ---- 9832718 pairs aligned concordantly 0 times; of these: 4784760 (48.66%) aligned discordantly 1 time ---- 5047958 pairs aligned 0 times concordantly or discordantly; of these: 10095916 mates make up the pairs; of these: 7567534 (74.96%) aligned 0 times 790708 (7.83%) aligned exactly 1 time 1737674 (17.21%) aligned >1 times 87.05% overall alignment rate Time searching: 01:21:03 Overall time: 01:21:03 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 3313978 / 23848423 = 0.1390 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 11:40:21: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 11:40:21: #1 read tag files... INFO @ Tue, 16 Jun 2020 11:40:21: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 11:40:28: 1000000 INFO @ Tue, 16 Jun 2020 11:40:36: 2000000 INFO @ Tue, 16 Jun 2020 11:40:43: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 11:40:51: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 11:40:51: #1 read tag files... INFO @ Tue, 16 Jun 2020 11:40:51: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 11:40:51: 4000000 INFO @ Tue, 16 Jun 2020 11:40:57: 1000000 INFO @ Tue, 16 Jun 2020 11:40:59: 5000000 INFO @ Tue, 16 Jun 2020 11:41:03: 2000000 INFO @ Tue, 16 Jun 2020 11:41:06: 6000000 INFO @ Tue, 16 Jun 2020 11:41:09: 3000000 INFO @ Tue, 16 Jun 2020 11:41:14: 7000000 INFO @ Tue, 16 Jun 2020 11:41:16: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 11:41:21: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 11:41:21: #1 read tag files... INFO @ Tue, 16 Jun 2020 11:41:21: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 11:41:22: 8000000 INFO @ Tue, 16 Jun 2020 11:41:22: 5000000 INFO @ Tue, 16 Jun 2020 11:41:28: 1000000 INFO @ Tue, 16 Jun 2020 11:41:28: 6000000 INFO @ Tue, 16 Jun 2020 11:41:29: 9000000 INFO @ Tue, 16 Jun 2020 11:41:34: 2000000 INFO @ Tue, 16 Jun 2020 11:41:35: 7000000 INFO @ Tue, 16 Jun 2020 11:41:37: 10000000 INFO @ Tue, 16 Jun 2020 11:41:41: 3000000 INFO @ Tue, 16 Jun 2020 11:41:41: 8000000 INFO @ Tue, 16 Jun 2020 11:41:45: 11000000 INFO @ Tue, 16 Jun 2020 11:41:47: 4000000 INFO @ Tue, 16 Jun 2020 11:41:48: 9000000 INFO @ Tue, 16 Jun 2020 11:41:52: 12000000 INFO @ Tue, 16 Jun 2020 11:41:54: 5000000 INFO @ Tue, 16 Jun 2020 11:41:54: 10000000 INFO @ Tue, 16 Jun 2020 11:42:00: 13000000 INFO @ Tue, 16 Jun 2020 11:42:00: 6000000 INFO @ Tue, 16 Jun 2020 11:42:01: 11000000 INFO @ Tue, 16 Jun 2020 11:42:07: 7000000 INFO @ Tue, 16 Jun 2020 11:42:07: 14000000 INFO @ Tue, 16 Jun 2020 11:42:07: 12000000 INFO @ Tue, 16 Jun 2020 11:42:13: 8000000 INFO @ Tue, 16 Jun 2020 11:42:14: 13000000 INFO @ Tue, 16 Jun 2020 11:42:15: 15000000 INFO @ Tue, 16 Jun 2020 11:42:20: 9000000 INFO @ Tue, 16 Jun 2020 11:42:21: 14000000 INFO @ Tue, 16 Jun 2020 11:42:23: 16000000 INFO @ Tue, 16 Jun 2020 11:42:26: 10000000 INFO @ Tue, 16 Jun 2020 11:42:27: 15000000 INFO @ Tue, 16 Jun 2020 11:42:30: 17000000 INFO @ Tue, 16 Jun 2020 11:42:33: 11000000 INFO @ Tue, 16 Jun 2020 11:42:34: 16000000 INFO @ Tue, 16 Jun 2020 11:42:38: 18000000 INFO @ Tue, 16 Jun 2020 11:42:39: 12000000 INFO @ Tue, 16 Jun 2020 11:42:40: 17000000 INFO @ Tue, 16 Jun 2020 11:42:46: 19000000 INFO @ Tue, 16 Jun 2020 11:42:46: 13000000 INFO @ Tue, 16 Jun 2020 11:42:47: 18000000 INFO @ Tue, 16 Jun 2020 11:42:53: 14000000 INFO @ Tue, 16 Jun 2020 11:42:53: 20000000 INFO @ Tue, 16 Jun 2020 11:42:54: 19000000 INFO @ Tue, 16 Jun 2020 11:42:59: 15000000 INFO @ Tue, 16 Jun 2020 11:43:01: 20000000 INFO @ Tue, 16 Jun 2020 11:43:01: 21000000 INFO @ Tue, 16 Jun 2020 11:43:06: 16000000 INFO @ Tue, 16 Jun 2020 11:43:07: 21000000 INFO @ Tue, 16 Jun 2020 11:43:09: 22000000 INFO @ Tue, 16 Jun 2020 11:43:13: 17000000 INFO @ Tue, 16 Jun 2020 11:43:14: 22000000 INFO @ Tue, 16 Jun 2020 11:43:16: 23000000 INFO @ Tue, 16 Jun 2020 11:43:20: 18000000 INFO @ Tue, 16 Jun 2020 11:43:21: 23000000 INFO @ Tue, 16 Jun 2020 11:43:24: 24000000 INFO @ Tue, 16 Jun 2020 11:43:26: 19000000 INFO @ Tue, 16 Jun 2020 11:43:28: 24000000 INFO @ Tue, 16 Jun 2020 11:43:32: 25000000 INFO @ Tue, 16 Jun 2020 11:43:33: 20000000 INFO @ Tue, 16 Jun 2020 11:43:35: 25000000 INFO @ Tue, 16 Jun 2020 11:43:40: 26000000 INFO @ Tue, 16 Jun 2020 11:43:40: 21000000 INFO @ Tue, 16 Jun 2020 11:43:41: 26000000 INFO @ Tue, 16 Jun 2020 11:43:47: 22000000 INFO @ Tue, 16 Jun 2020 11:43:48: 27000000 INFO @ Tue, 16 Jun 2020 11:43:48: 27000000 INFO @ Tue, 16 Jun 2020 11:43:54: 23000000 INFO @ Tue, 16 Jun 2020 11:43:56: 28000000 INFO @ Tue, 16 Jun 2020 11:43:56: 28000000 INFO @ Tue, 16 Jun 2020 11:44:01: 24000000 INFO @ Tue, 16 Jun 2020 11:44:04: 29000000 INFO @ Tue, 16 Jun 2020 11:44:04: 29000000 INFO @ Tue, 16 Jun 2020 11:44:07: 25000000 INFO @ Tue, 16 Jun 2020 11:44:11: 30000000 INFO @ Tue, 16 Jun 2020 11:44:12: 30000000 INFO @ Tue, 16 Jun 2020 11:44:14: 26000000 INFO @ Tue, 16 Jun 2020 11:44:19: 31000000 INFO @ Tue, 16 Jun 2020 11:44:20: 31000000 INFO @ Tue, 16 Jun 2020 11:44:21: 27000000 INFO @ Tue, 16 Jun 2020 11:44:27: 32000000 INFO @ Tue, 16 Jun 2020 11:44:27: 32000000 INFO @ Tue, 16 Jun 2020 11:44:28: 28000000 INFO @ Tue, 16 Jun 2020 11:44:34: 29000000 INFO @ Tue, 16 Jun 2020 11:44:35: 33000000 INFO @ Tue, 16 Jun 2020 11:44:35: 33000000 INFO @ Tue, 16 Jun 2020 11:44:41: 30000000 INFO @ Tue, 16 Jun 2020 11:44:42: 34000000 INFO @ Tue, 16 Jun 2020 11:44:43: 34000000 INFO @ Tue, 16 Jun 2020 11:44:48: 31000000 INFO @ Tue, 16 Jun 2020 11:44:50: 35000000 INFO @ Tue, 16 Jun 2020 11:44:51: 35000000 INFO @ Tue, 16 Jun 2020 11:44:54: 32000000 INFO @ Tue, 16 Jun 2020 11:44:57: 36000000 INFO @ Tue, 16 Jun 2020 11:44:58: 36000000 INFO @ Tue, 16 Jun 2020 11:45:01: 33000000 INFO @ Tue, 16 Jun 2020 11:45:05: 37000000 INFO @ Tue, 16 Jun 2020 11:45:05: 37000000 INFO @ Tue, 16 Jun 2020 11:45:07: 34000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 11:45:12: 38000000 INFO @ Tue, 16 Jun 2020 11:45:13: 38000000 INFO @ Tue, 16 Jun 2020 11:45:14: 35000000 INFO @ Tue, 16 Jun 2020 11:45:20: 39000000 INFO @ Tue, 16 Jun 2020 11:45:20: 39000000 INFO @ Tue, 16 Jun 2020 11:45:20: 36000000 INFO @ Tue, 16 Jun 2020 11:45:26: 37000000 INFO @ Tue, 16 Jun 2020 11:45:27: 40000000 INFO @ Tue, 16 Jun 2020 11:45:27: 40000000 INFO @ Tue, 16 Jun 2020 11:45:33: 38000000 INFO @ Tue, 16 Jun 2020 11:45:35: 41000000 INFO @ Tue, 16 Jun 2020 11:45:35: 41000000 INFO @ Tue, 16 Jun 2020 11:45:39: 39000000 INFO @ Tue, 16 Jun 2020 11:45:42: 42000000 INFO @ Tue, 16 Jun 2020 11:45:43: 42000000 INFO @ Tue, 16 Jun 2020 11:45:46: 40000000 INFO @ Tue, 16 Jun 2020 11:45:50: 43000000 INFO @ Tue, 16 Jun 2020 11:45:50: 43000000 INFO @ Tue, 16 Jun 2020 11:45:52: 41000000 INFO @ Tue, 16 Jun 2020 11:45:57: 44000000 INFO @ Tue, 16 Jun 2020 11:45:58: 44000000 INFO @ Tue, 16 Jun 2020 11:45:58: 42000000 INFO @ Tue, 16 Jun 2020 11:45:59: #1 tag size is determined as 150 bps INFO @ Tue, 16 Jun 2020 11:45:59: #1 tag size = 150 INFO @ Tue, 16 Jun 2020 11:45:59: #1 total tags in treatment: 16502973 INFO @ Tue, 16 Jun 2020 11:45:59: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 11:45:59: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 11:45:59: #1 tags after filtering in treatment: 12865226 INFO @ Tue, 16 Jun 2020 11:45:59: #1 Redundant rate of treatment: 0.22 INFO @ Tue, 16 Jun 2020 11:45:59: #1 finished! INFO @ Tue, 16 Jun 2020 11:45:59: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 11:45:59: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 11:45:59: #1 tag size is determined as 150 bps INFO @ Tue, 16 Jun 2020 11:45:59: #1 tag size = 150 INFO @ Tue, 16 Jun 2020 11:45:59: #1 total tags in treatment: 16502973 INFO @ Tue, 16 Jun 2020 11:45:59: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 11:45:59: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 11:46:00: #1 tags after filtering in treatment: 12865226 INFO @ Tue, 16 Jun 2020 11:46:00: #1 Redundant rate of treatment: 0.22 INFO @ Tue, 16 Jun 2020 11:46:00: #1 finished! INFO @ Tue, 16 Jun 2020 11:46:00: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 11:46:00: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 11:46:00: #2 number of paired peaks: 535 WARNING @ Tue, 16 Jun 2020 11:46:00: Fewer paired peaks (535) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 535 pairs to build model! INFO @ Tue, 16 Jun 2020 11:46:00: start model_add_line... INFO @ Tue, 16 Jun 2020 11:46:00: start X-correlation... INFO @ Tue, 16 Jun 2020 11:46:00: end of X-cor INFO @ Tue, 16 Jun 2020 11:46:00: #2 finished! INFO @ Tue, 16 Jun 2020 11:46:00: #2 predicted fragment length is 201 bps INFO @ Tue, 16 Jun 2020 11:46:00: #2 alternative fragment length(s) may be 4,201 bps INFO @ Tue, 16 Jun 2020 11:46:00: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.05_model.r WARNING @ Tue, 16 Jun 2020 11:46:00: #2 Since the d (201) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 11:46:00: #2 You may need to consider one of the other alternative d(s): 4,201 WARNING @ Tue, 16 Jun 2020 11:46:00: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 11:46:00: #3 Call peaks... INFO @ Tue, 16 Jun 2020 11:46:00: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 11:46:01: #2 number of paired peaks: 535 WARNING @ Tue, 16 Jun 2020 11:46:01: Fewer paired peaks (535) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 535 pairs to build model! INFO @ Tue, 16 Jun 2020 11:46:01: start model_add_line... INFO @ Tue, 16 Jun 2020 11:46:01: start X-correlation... INFO @ Tue, 16 Jun 2020 11:46:01: end of X-cor INFO @ Tue, 16 Jun 2020 11:46:01: #2 finished! INFO @ Tue, 16 Jun 2020 11:46:01: #2 predicted fragment length is 201 bps INFO @ Tue, 16 Jun 2020 11:46:01: #2 alternative fragment length(s) may be 4,201 bps INFO @ Tue, 16 Jun 2020 11:46:01: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.10_model.r WARNING @ Tue, 16 Jun 2020 11:46:01: #2 Since the d (201) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 11:46:01: #2 You may need to consider one of the other alternative d(s): 4,201 WARNING @ Tue, 16 Jun 2020 11:46:01: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 11:46:01: #3 Call peaks... INFO @ Tue, 16 Jun 2020 11:46:01: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 11:46:04: 43000000 INFO @ Tue, 16 Jun 2020 11:46:11: 44000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 11:46:12: #1 tag size is determined as 150 bps INFO @ Tue, 16 Jun 2020 11:46:12: #1 tag size = 150 INFO @ Tue, 16 Jun 2020 11:46:12: #1 total tags in treatment: 16502973 INFO @ Tue, 16 Jun 2020 11:46:12: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 11:46:12: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 11:46:13: #1 tags after filtering in treatment: 12865226 INFO @ Tue, 16 Jun 2020 11:46:13: #1 Redundant rate of treatment: 0.22 INFO @ Tue, 16 Jun 2020 11:46:13: #1 finished! INFO @ Tue, 16 Jun 2020 11:46:13: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 11:46:13: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 11:46:14: #2 number of paired peaks: 535 WARNING @ Tue, 16 Jun 2020 11:46:14: Fewer paired peaks (535) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 535 pairs to build model! INFO @ Tue, 16 Jun 2020 11:46:14: start model_add_line... INFO @ Tue, 16 Jun 2020 11:46:14: start X-correlation... INFO @ Tue, 16 Jun 2020 11:46:14: end of X-cor INFO @ Tue, 16 Jun 2020 11:46:14: #2 finished! INFO @ Tue, 16 Jun 2020 11:46:14: #2 predicted fragment length is 201 bps INFO @ Tue, 16 Jun 2020 11:46:14: #2 alternative fragment length(s) may be 4,201 bps INFO @ Tue, 16 Jun 2020 11:46:14: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.20_model.r WARNING @ Tue, 16 Jun 2020 11:46:14: #2 Since the d (201) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 11:46:14: #2 You may need to consider one of the other alternative d(s): 4,201 WARNING @ Tue, 16 Jun 2020 11:46:14: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 11:46:14: #3 Call peaks... INFO @ Tue, 16 Jun 2020 11:46:14: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 11:46:28: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 11:46:29: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 11:46:42: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 11:46:42: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.05_peaks.xls INFO @ Tue, 16 Jun 2020 11:46:42: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.05_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 11:46:42: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.05_summits.bed INFO @ Tue, 16 Jun 2020 11:46:42: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (847 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 11:46:42: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.10_peaks.xls INFO @ Tue, 16 Jun 2020 11:46:42: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.10_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 11:46:42: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.10_summits.bed INFO @ Tue, 16 Jun 2020 11:46:42: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (499 records, 4 fields): 1 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 11:46:54: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.20_peaks.xls INFO @ Tue, 16 Jun 2020 11:46:55: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.20_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 11:46:55: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX6619592/SRX6619592.20_summits.bed INFO @ Tue, 16 Jun 2020 11:46:55: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (319 records, 4 fields): 1 millis CompletedMACS2peakCalling