Job ID = 6368861 SRX = SRX6619559 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-16T00:31:15 prefetch.2.10.7: 1) Downloading 'SRR9866050'... 2020-06-16T00:31:15 prefetch.2.10.7: Downloading via HTTPS... 2020-06-16T00:53:40 prefetch.2.10.7: HTTPS download succeed 2020-06-16T00:53:40 prefetch.2.10.7: 1) 'SRR9866050' was downloaded successfully 2020-06-16T00:53:40 prefetch.2.10.7: 'SRR9866050' has 0 unresolved dependencies Read 64952264 spots for SRR9866050/SRR9866050.sra Written 64952264 spots for SRR9866050/SRR9866050.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:32:30 64952264 reads; of these: 64952264 (100.00%) were paired; of these: 21760745 (33.50%) aligned concordantly 0 times 32968673 (50.76%) aligned concordantly exactly 1 time 10222846 (15.74%) aligned concordantly >1 times ---- 21760745 pairs aligned concordantly 0 times; of these: 12194447 (56.04%) aligned discordantly 1 time ---- 9566298 pairs aligned 0 times concordantly or discordantly; of these: 19132596 mates make up the pairs; of these: 10786021 (56.38%) aligned 0 times 2676419 (13.99%) aligned exactly 1 time 5670156 (29.64%) aligned >1 times 91.70% overall alignment rate Time searching: 02:32:30 Overall time: 02:32:30 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 88 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 11554597 / 55133901 = 0.2096 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 13:19:50: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 13:19:50: #1 read tag files... INFO @ Tue, 16 Jun 2020 13:19:50: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 13:19:57: 1000000 INFO @ Tue, 16 Jun 2020 13:20:05: 2000000 INFO @ Tue, 16 Jun 2020 13:20:13: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 13:20:20: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 13:20:20: #1 read tag files... INFO @ Tue, 16 Jun 2020 13:20:20: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 13:20:20: 4000000 INFO @ Tue, 16 Jun 2020 13:20:30: 5000000 INFO @ Tue, 16 Jun 2020 13:20:31: 1000000 INFO @ Tue, 16 Jun 2020 13:20:40: 6000000 INFO @ Tue, 16 Jun 2020 13:20:43: 2000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 13:20:50: 7000000 INFO @ Tue, 16 Jun 2020 13:20:50: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 13:20:50: #1 read tag files... INFO @ Tue, 16 Jun 2020 13:20:50: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 13:20:54: 3000000 INFO @ Tue, 16 Jun 2020 13:21:00: 8000000 INFO @ Tue, 16 Jun 2020 13:21:00: 1000000 INFO @ Tue, 16 Jun 2020 13:21:06: 4000000 INFO @ Tue, 16 Jun 2020 13:21:10: 9000000 INFO @ Tue, 16 Jun 2020 13:21:10: 2000000 INFO @ Tue, 16 Jun 2020 13:21:17: 5000000 INFO @ Tue, 16 Jun 2020 13:21:20: 10000000 INFO @ Tue, 16 Jun 2020 13:21:21: 3000000 INFO @ Tue, 16 Jun 2020 13:21:29: 6000000 INFO @ Tue, 16 Jun 2020 13:21:31: 11000000 INFO @ Tue, 16 Jun 2020 13:21:31: 4000000 INFO @ Tue, 16 Jun 2020 13:21:40: 7000000 INFO @ Tue, 16 Jun 2020 13:21:41: 12000000 INFO @ Tue, 16 Jun 2020 13:21:42: 5000000 INFO @ Tue, 16 Jun 2020 13:21:51: 8000000 INFO @ Tue, 16 Jun 2020 13:21:52: 13000000 INFO @ Tue, 16 Jun 2020 13:21:52: 6000000 INFO @ Tue, 16 Jun 2020 13:22:02: 14000000 INFO @ Tue, 16 Jun 2020 13:22:03: 7000000 INFO @ Tue, 16 Jun 2020 13:22:04: 9000000 INFO @ Tue, 16 Jun 2020 13:22:13: 15000000 INFO @ Tue, 16 Jun 2020 13:22:13: 8000000 INFO @ Tue, 16 Jun 2020 13:22:15: 10000000 INFO @ Tue, 16 Jun 2020 13:22:24: 16000000 INFO @ Tue, 16 Jun 2020 13:22:24: 9000000 INFO @ Tue, 16 Jun 2020 13:22:27: 11000000 INFO @ Tue, 16 Jun 2020 13:22:34: 17000000 INFO @ Tue, 16 Jun 2020 13:22:35: 10000000 INFO @ Tue, 16 Jun 2020 13:22:39: 12000000 INFO @ Tue, 16 Jun 2020 13:22:45: 18000000 INFO @ Tue, 16 Jun 2020 13:22:45: 11000000 INFO @ Tue, 16 Jun 2020 13:22:50: 13000000 INFO @ Tue, 16 Jun 2020 13:22:56: 12000000 INFO @ Tue, 16 Jun 2020 13:22:56: 19000000 INFO @ Tue, 16 Jun 2020 13:23:02: 14000000 INFO @ Tue, 16 Jun 2020 13:23:06: 13000000 INFO @ Tue, 16 Jun 2020 13:23:07: 20000000 INFO @ Tue, 16 Jun 2020 13:23:15: 15000000 INFO @ Tue, 16 Jun 2020 13:23:17: 14000000 INFO @ Tue, 16 Jun 2020 13:23:17: 21000000 INFO @ Tue, 16 Jun 2020 13:23:26: 16000000 INFO @ Tue, 16 Jun 2020 13:23:27: 15000000 INFO @ Tue, 16 Jun 2020 13:23:28: 22000000 INFO @ Tue, 16 Jun 2020 13:23:38: 17000000 INFO @ Tue, 16 Jun 2020 13:23:38: 16000000 INFO @ Tue, 16 Jun 2020 13:23:39: 23000000 INFO @ Tue, 16 Jun 2020 13:23:48: 17000000 INFO @ Tue, 16 Jun 2020 13:23:49: 18000000 INFO @ Tue, 16 Jun 2020 13:23:50: 24000000 INFO @ Tue, 16 Jun 2020 13:23:58: 18000000 INFO @ Tue, 16 Jun 2020 13:24:01: 25000000 INFO @ Tue, 16 Jun 2020 13:24:01: 19000000 INFO @ Tue, 16 Jun 2020 13:24:09: 19000000 INFO @ Tue, 16 Jun 2020 13:24:11: 26000000 INFO @ Tue, 16 Jun 2020 13:24:14: 20000000 INFO @ Tue, 16 Jun 2020 13:24:20: 20000000 INFO @ Tue, 16 Jun 2020 13:24:22: 27000000 INFO @ Tue, 16 Jun 2020 13:24:26: 21000000 INFO @ Tue, 16 Jun 2020 13:24:31: 21000000 INFO @ Tue, 16 Jun 2020 13:24:33: 28000000 INFO @ Tue, 16 Jun 2020 13:24:37: 22000000 INFO @ Tue, 16 Jun 2020 13:24:41: 22000000 INFO @ Tue, 16 Jun 2020 13:24:44: 29000000 INFO @ Tue, 16 Jun 2020 13:24:49: 23000000 INFO @ Tue, 16 Jun 2020 13:24:52: 23000000 INFO @ Tue, 16 Jun 2020 13:24:54: 30000000 INFO @ Tue, 16 Jun 2020 13:25:01: 24000000 INFO @ Tue, 16 Jun 2020 13:25:02: 24000000 INFO @ Tue, 16 Jun 2020 13:25:05: 31000000 INFO @ Tue, 16 Jun 2020 13:25:13: 25000000 INFO @ Tue, 16 Jun 2020 13:25:14: 25000000 INFO @ Tue, 16 Jun 2020 13:25:15: 32000000 INFO @ Tue, 16 Jun 2020 13:25:25: 26000000 INFO @ Tue, 16 Jun 2020 13:25:26: 33000000 INFO @ Tue, 16 Jun 2020 13:25:26: 26000000 INFO @ Tue, 16 Jun 2020 13:25:36: 34000000 INFO @ Tue, 16 Jun 2020 13:25:37: 27000000 INFO @ Tue, 16 Jun 2020 13:25:38: 27000000 INFO @ Tue, 16 Jun 2020 13:25:46: 35000000 INFO @ Tue, 16 Jun 2020 13:25:51: 28000000 INFO @ Tue, 16 Jun 2020 13:25:51: 28000000 INFO @ Tue, 16 Jun 2020 13:25:56: 36000000 INFO @ Tue, 16 Jun 2020 13:26:03: 29000000 INFO @ Tue, 16 Jun 2020 13:26:03: 29000000 INFO @ Tue, 16 Jun 2020 13:26:07: 37000000 INFO @ Tue, 16 Jun 2020 13:26:15: 30000000 INFO @ Tue, 16 Jun 2020 13:26:16: 30000000 INFO @ Tue, 16 Jun 2020 13:26:17: 38000000 INFO @ Tue, 16 Jun 2020 13:26:27: 39000000 INFO @ Tue, 16 Jun 2020 13:26:27: 31000000 INFO @ Tue, 16 Jun 2020 13:26:28: 31000000 INFO @ Tue, 16 Jun 2020 13:26:37: 40000000 INFO @ Tue, 16 Jun 2020 13:26:40: 32000000 INFO @ Tue, 16 Jun 2020 13:26:40: 32000000 INFO @ Tue, 16 Jun 2020 13:26:47: 41000000 INFO @ Tue, 16 Jun 2020 13:26:52: 33000000 INFO @ Tue, 16 Jun 2020 13:26:52: 33000000 INFO @ Tue, 16 Jun 2020 13:26:57: 42000000 INFO @ Tue, 16 Jun 2020 13:27:03: 34000000 INFO @ Tue, 16 Jun 2020 13:27:04: 34000000 INFO @ Tue, 16 Jun 2020 13:27:08: 43000000 INFO @ Tue, 16 Jun 2020 13:27:15: 35000000 INFO @ Tue, 16 Jun 2020 13:27:16: 35000000 INFO @ Tue, 16 Jun 2020 13:27:19: 44000000 INFO @ Tue, 16 Jun 2020 13:27:27: 36000000 INFO @ Tue, 16 Jun 2020 13:27:27: 36000000 INFO @ Tue, 16 Jun 2020 13:27:29: 45000000 INFO @ Tue, 16 Jun 2020 13:27:38: 37000000 INFO @ Tue, 16 Jun 2020 13:27:39: 37000000 INFO @ Tue, 16 Jun 2020 13:27:39: 46000000 INFO @ Tue, 16 Jun 2020 13:27:49: 38000000 INFO @ Tue, 16 Jun 2020 13:27:49: 47000000 INFO @ Tue, 16 Jun 2020 13:27:50: 38000000 INFO @ Tue, 16 Jun 2020 13:28:00: 48000000 INFO @ Tue, 16 Jun 2020 13:28:00: 39000000 INFO @ Tue, 16 Jun 2020 13:28:01: 39000000 INFO @ Tue, 16 Jun 2020 13:28:10: 49000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 13:28:12: 40000000 INFO @ Tue, 16 Jun 2020 13:28:13: 40000000 INFO @ Tue, 16 Jun 2020 13:28:20: 50000000 INFO @ Tue, 16 Jun 2020 13:28:24: 41000000 INFO @ Tue, 16 Jun 2020 13:28:24: 41000000 INFO @ Tue, 16 Jun 2020 13:28:30: 51000000 INFO @ Tue, 16 Jun 2020 13:28:35: 42000000 INFO @ Tue, 16 Jun 2020 13:28:36: 42000000 INFO @ Tue, 16 Jun 2020 13:28:41: 52000000 INFO @ Tue, 16 Jun 2020 13:28:47: 43000000 INFO @ Tue, 16 Jun 2020 13:28:47: 43000000 INFO @ Tue, 16 Jun 2020 13:28:51: 53000000 INFO @ Tue, 16 Jun 2020 13:28:58: 44000000 INFO @ Tue, 16 Jun 2020 13:28:59: 44000000 INFO @ Tue, 16 Jun 2020 13:29:02: 54000000 INFO @ Tue, 16 Jun 2020 13:29:10: 45000000 INFO @ Tue, 16 Jun 2020 13:29:11: 45000000 INFO @ Tue, 16 Jun 2020 13:29:12: 55000000 INFO @ Tue, 16 Jun 2020 13:29:22: 46000000 INFO @ Tue, 16 Jun 2020 13:29:23: 46000000 INFO @ Tue, 16 Jun 2020 13:29:23: 56000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 13:29:33: 47000000 INFO @ Tue, 16 Jun 2020 13:29:34: 57000000 INFO @ Tue, 16 Jun 2020 13:29:34: 47000000 INFO @ Tue, 16 Jun 2020 13:29:44: 58000000 INFO @ Tue, 16 Jun 2020 13:29:45: 48000000 INFO @ Tue, 16 Jun 2020 13:29:46: 48000000 INFO @ Tue, 16 Jun 2020 13:29:54: 59000000 INFO @ Tue, 16 Jun 2020 13:29:57: 49000000 INFO @ Tue, 16 Jun 2020 13:29:58: 49000000 INFO @ Tue, 16 Jun 2020 13:30:05: 60000000 INFO @ Tue, 16 Jun 2020 13:30:09: 50000000 INFO @ Tue, 16 Jun 2020 13:30:09: 50000000 INFO @ Tue, 16 Jun 2020 13:30:15: 61000000 INFO @ Tue, 16 Jun 2020 13:30:20: 51000000 INFO @ Tue, 16 Jun 2020 13:30:21: 51000000 INFO @ Tue, 16 Jun 2020 13:30:26: 62000000 INFO @ Tue, 16 Jun 2020 13:30:33: 52000000 INFO @ Tue, 16 Jun 2020 13:30:34: 52000000 INFO @ Tue, 16 Jun 2020 13:30:37: 63000000 INFO @ Tue, 16 Jun 2020 13:30:46: 53000000 INFO @ Tue, 16 Jun 2020 13:30:47: 53000000 INFO @ Tue, 16 Jun 2020 13:30:47: 64000000 INFO @ Tue, 16 Jun 2020 13:30:58: 65000000 INFO @ Tue, 16 Jun 2020 13:31:00: 54000000 INFO @ Tue, 16 Jun 2020 13:31:00: 54000000 INFO @ Tue, 16 Jun 2020 13:31:09: 66000000 INFO @ Tue, 16 Jun 2020 13:31:13: 55000000 INFO @ Tue, 16 Jun 2020 13:31:14: 55000000 INFO @ Tue, 16 Jun 2020 13:31:19: 67000000 INFO @ Tue, 16 Jun 2020 13:31:24: 56000000 INFO @ Tue, 16 Jun 2020 13:31:26: 56000000 INFO @ Tue, 16 Jun 2020 13:31:29: 68000000 INFO @ Tue, 16 Jun 2020 13:31:35: 57000000 INFO @ Tue, 16 Jun 2020 13:31:38: 57000000 INFO @ Tue, 16 Jun 2020 13:31:40: 69000000 INFO @ Tue, 16 Jun 2020 13:31:45: 58000000 INFO @ Tue, 16 Jun 2020 13:31:51: 70000000 INFO @ Tue, 16 Jun 2020 13:31:51: 58000000 INFO @ Tue, 16 Jun 2020 13:31:56: 59000000 INFO @ Tue, 16 Jun 2020 13:32:02: 71000000 INFO @ Tue, 16 Jun 2020 13:32:03: 59000000 INFO @ Tue, 16 Jun 2020 13:32:06: 60000000 INFO @ Tue, 16 Jun 2020 13:32:12: 72000000 INFO @ Tue, 16 Jun 2020 13:32:16: 60000000 INFO @ Tue, 16 Jun 2020 13:32:17: 61000000 INFO @ Tue, 16 Jun 2020 13:32:23: 73000000 INFO @ Tue, 16 Jun 2020 13:32:28: 62000000 INFO @ Tue, 16 Jun 2020 13:32:28: 61000000 INFO @ Tue, 16 Jun 2020 13:32:33: 74000000 INFO @ Tue, 16 Jun 2020 13:32:38: 63000000 INFO @ Tue, 16 Jun 2020 13:32:41: 62000000 INFO @ Tue, 16 Jun 2020 13:32:44: 75000000 INFO @ Tue, 16 Jun 2020 13:32:49: 64000000 INFO @ Tue, 16 Jun 2020 13:32:53: 63000000 INFO @ Tue, 16 Jun 2020 13:32:54: 76000000 INFO @ Tue, 16 Jun 2020 13:32:59: 65000000 INFO @ Tue, 16 Jun 2020 13:33:05: 77000000 INFO @ Tue, 16 Jun 2020 13:33:06: 64000000 INFO @ Tue, 16 Jun 2020 13:33:10: 66000000 INFO @ Tue, 16 Jun 2020 13:33:16: 78000000 INFO @ Tue, 16 Jun 2020 13:33:18: 65000000 INFO @ Tue, 16 Jun 2020 13:33:20: 67000000 INFO @ Tue, 16 Jun 2020 13:33:26: 79000000 INFO @ Tue, 16 Jun 2020 13:33:31: 68000000 INFO @ Tue, 16 Jun 2020 13:33:31: 66000000 INFO @ Tue, 16 Jun 2020 13:33:37: 80000000 INFO @ Tue, 16 Jun 2020 13:33:41: 69000000 INFO @ Tue, 16 Jun 2020 13:33:43: 67000000 INFO @ Tue, 16 Jun 2020 13:33:47: 81000000 INFO @ Tue, 16 Jun 2020 13:33:52: 70000000 INFO @ Tue, 16 Jun 2020 13:33:55: 68000000 INFO @ Tue, 16 Jun 2020 13:33:58: 82000000 INFO @ Tue, 16 Jun 2020 13:34:03: 71000000 INFO @ Tue, 16 Jun 2020 13:34:08: 69000000 INFO @ Tue, 16 Jun 2020 13:34:09: 83000000 INFO @ Tue, 16 Jun 2020 13:34:13: 72000000 INFO @ Tue, 16 Jun 2020 13:34:19: 84000000 INFO @ Tue, 16 Jun 2020 13:34:20: 70000000 INFO @ Tue, 16 Jun 2020 13:34:24: 73000000 INFO @ Tue, 16 Jun 2020 13:34:30: 85000000 INFO @ Tue, 16 Jun 2020 13:34:33: 71000000 INFO @ Tue, 16 Jun 2020 13:34:34: 74000000 INFO @ Tue, 16 Jun 2020 13:34:41: 86000000 INFO @ Tue, 16 Jun 2020 13:34:45: 75000000 INFO @ Tue, 16 Jun 2020 13:34:45: 72000000 INFO @ Tue, 16 Jun 2020 13:34:51: 87000000 INFO @ Tue, 16 Jun 2020 13:34:56: 76000000 INFO @ Tue, 16 Jun 2020 13:34:58: 73000000 INFO @ Tue, 16 Jun 2020 13:35:02: 88000000 INFO @ Tue, 16 Jun 2020 13:35:06: 77000000 INFO @ Tue, 16 Jun 2020 13:35:10: 74000000 INFO @ Tue, 16 Jun 2020 13:35:13: 89000000 INFO @ Tue, 16 Jun 2020 13:35:17: 78000000 INFO @ Tue, 16 Jun 2020 13:35:22: 75000000 INFO @ Tue, 16 Jun 2020 13:35:24: 90000000 INFO @ Tue, 16 Jun 2020 13:35:28: 79000000 INFO @ Tue, 16 Jun 2020 13:35:35: 76000000 INFO @ Tue, 16 Jun 2020 13:35:35: 91000000 INFO @ Tue, 16 Jun 2020 13:35:40: 80000000 INFO @ Tue, 16 Jun 2020 13:35:46: 92000000 INFO @ Tue, 16 Jun 2020 13:35:47: 77000000 INFO @ Tue, 16 Jun 2020 13:35:51: 81000000 INFO @ Tue, 16 Jun 2020 13:35:57: 93000000 INFO @ Tue, 16 Jun 2020 13:36:00: 78000000 INFO @ Tue, 16 Jun 2020 13:36:02: 82000000 INFO @ Tue, 16 Jun 2020 13:36:08: 94000000 INFO @ Tue, 16 Jun 2020 13:36:12: 83000000 INFO @ Tue, 16 Jun 2020 13:36:13: 79000000 INFO @ Tue, 16 Jun 2020 13:36:19: 95000000 INFO @ Tue, 16 Jun 2020 13:36:23: 84000000 INFO @ Tue, 16 Jun 2020 13:36:25: 80000000 INFO @ Tue, 16 Jun 2020 13:36:30: 96000000 INFO @ Tue, 16 Jun 2020 13:36:31: #1 tag size is determined as 150 bps INFO @ Tue, 16 Jun 2020 13:36:31: #1 tag size = 150 INFO @ Tue, 16 Jun 2020 13:36:31: #1 total tags in treatment: 34179399 INFO @ Tue, 16 Jun 2020 13:36:31: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 13:36:31: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 13:36:31: #1 tags after filtering in treatment: 24755875 INFO @ Tue, 16 Jun 2020 13:36:31: #1 Redundant rate of treatment: 0.28 INFO @ Tue, 16 Jun 2020 13:36:31: #1 finished! INFO @ Tue, 16 Jun 2020 13:36:31: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 13:36:31: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 13:36:33: #2 number of paired peaks: 1003 INFO @ Tue, 16 Jun 2020 13:36:33: start model_add_line... INFO @ Tue, 16 Jun 2020 13:36:33: start X-correlation... INFO @ Tue, 16 Jun 2020 13:36:33: end of X-cor INFO @ Tue, 16 Jun 2020 13:36:33: #2 finished! INFO @ Tue, 16 Jun 2020 13:36:33: #2 predicted fragment length is 207 bps INFO @ Tue, 16 Jun 2020 13:36:33: #2 alternative fragment length(s) may be 3,207,232 bps INFO @ Tue, 16 Jun 2020 13:36:33: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.05_model.r WARNING @ Tue, 16 Jun 2020 13:36:33: #2 Since the d (207) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 13:36:33: #2 You may need to consider one of the other alternative d(s): 3,207,232 WARNING @ Tue, 16 Jun 2020 13:36:33: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 13:36:33: #3 Call peaks... INFO @ Tue, 16 Jun 2020 13:36:33: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 13:36:34: 85000000 INFO @ Tue, 16 Jun 2020 13:36:37: 81000000 INFO @ Tue, 16 Jun 2020 13:36:44: 86000000 INFO @ Tue, 16 Jun 2020 13:36:50: 82000000 INFO @ Tue, 16 Jun 2020 13:36:55: 87000000 INFO @ Tue, 16 Jun 2020 13:37:02: 83000000 INFO @ Tue, 16 Jun 2020 13:37:06: 88000000 INFO @ Tue, 16 Jun 2020 13:37:14: 84000000 INFO @ Tue, 16 Jun 2020 13:37:16: 89000000 INFO @ Tue, 16 Jun 2020 13:37:26: 85000000 INFO @ Tue, 16 Jun 2020 13:37:27: 90000000 INFO @ Tue, 16 Jun 2020 13:37:38: 91000000 INFO @ Tue, 16 Jun 2020 13:37:39: 86000000 INFO @ Tue, 16 Jun 2020 13:37:42: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 13:37:48: 92000000 INFO @ Tue, 16 Jun 2020 13:37:51: 87000000 INFO @ Tue, 16 Jun 2020 13:37:59: 93000000 INFO @ Tue, 16 Jun 2020 13:38:03: 88000000 INFO @ Tue, 16 Jun 2020 13:38:10: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.05_peaks.xls INFO @ Tue, 16 Jun 2020 13:38:10: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.05_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 13:38:10: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.05_summits.bed INFO @ Tue, 16 Jun 2020 13:38:10: Done! INFO @ Tue, 16 Jun 2020 13:38:10: 94000000 pass1 - making usageList (6 chroms): 3 millis pass2 - checking and writing primary data (16304 records, 4 fields): 18 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 13:38:15: 89000000 INFO @ Tue, 16 Jun 2020 13:38:21: 95000000 INFO @ Tue, 16 Jun 2020 13:38:28: 90000000 INFO @ Tue, 16 Jun 2020 13:38:32: 96000000 INFO @ Tue, 16 Jun 2020 13:38:33: #1 tag size is determined as 150 bps INFO @ Tue, 16 Jun 2020 13:38:33: #1 tag size = 150 INFO @ Tue, 16 Jun 2020 13:38:33: #1 total tags in treatment: 34179399 INFO @ Tue, 16 Jun 2020 13:38:33: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 13:38:33: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 13:38:33: #1 tags after filtering in treatment: 24755875 INFO @ Tue, 16 Jun 2020 13:38:33: #1 Redundant rate of treatment: 0.28 INFO @ Tue, 16 Jun 2020 13:38:33: #1 finished! INFO @ Tue, 16 Jun 2020 13:38:33: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 13:38:33: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 13:38:35: #2 number of paired peaks: 1003 INFO @ Tue, 16 Jun 2020 13:38:35: start model_add_line... INFO @ Tue, 16 Jun 2020 13:38:35: start X-correlation... INFO @ Tue, 16 Jun 2020 13:38:35: end of X-cor INFO @ Tue, 16 Jun 2020 13:38:35: #2 finished! INFO @ Tue, 16 Jun 2020 13:38:35: #2 predicted fragment length is 207 bps INFO @ Tue, 16 Jun 2020 13:38:35: #2 alternative fragment length(s) may be 3,207,232 bps INFO @ Tue, 16 Jun 2020 13:38:35: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.20_model.r WARNING @ Tue, 16 Jun 2020 13:38:35: #2 Since the d (207) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 13:38:35: #2 You may need to consider one of the other alternative d(s): 3,207,232 WARNING @ Tue, 16 Jun 2020 13:38:35: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 13:38:35: #3 Call peaks... INFO @ Tue, 16 Jun 2020 13:38:35: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 13:38:39: 91000000 INFO @ Tue, 16 Jun 2020 13:38:50: 92000000 INFO @ Tue, 16 Jun 2020 13:39:01: 93000000 INFO @ Tue, 16 Jun 2020 13:39:11: 94000000 INFO @ Tue, 16 Jun 2020 13:39:22: 95000000 INFO @ Tue, 16 Jun 2020 13:39:32: 96000000 INFO @ Tue, 16 Jun 2020 13:39:33: #1 tag size is determined as 150 bps INFO @ Tue, 16 Jun 2020 13:39:33: #1 tag size = 150 INFO @ Tue, 16 Jun 2020 13:39:33: #1 total tags in treatment: 34179399 INFO @ Tue, 16 Jun 2020 13:39:33: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 13:39:33: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 13:39:33: #1 tags after filtering in treatment: 24755875 INFO @ Tue, 16 Jun 2020 13:39:33: #1 Redundant rate of treatment: 0.28 INFO @ Tue, 16 Jun 2020 13:39:33: #1 finished! INFO @ Tue, 16 Jun 2020 13:39:33: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 13:39:33: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 13:39:35: #2 number of paired peaks: 1003 INFO @ Tue, 16 Jun 2020 13:39:35: start model_add_line... INFO @ Tue, 16 Jun 2020 13:39:35: start X-correlation... INFO @ Tue, 16 Jun 2020 13:39:35: end of X-cor INFO @ Tue, 16 Jun 2020 13:39:35: #2 finished! INFO @ Tue, 16 Jun 2020 13:39:35: #2 predicted fragment length is 207 bps INFO @ Tue, 16 Jun 2020 13:39:35: #2 alternative fragment length(s) may be 3,207,232 bps INFO @ Tue, 16 Jun 2020 13:39:35: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.10_model.r WARNING @ Tue, 16 Jun 2020 13:39:35: #2 Since the d (207) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 13:39:35: #2 You may need to consider one of the other alternative d(s): 3,207,232 WARNING @ Tue, 16 Jun 2020 13:39:35: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 13:39:35: #3 Call peaks... INFO @ Tue, 16 Jun 2020 13:39:35: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 13:39:44: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 13:40:09: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.20_peaks.xls INFO @ Tue, 16 Jun 2020 13:40:10: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.20_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 13:40:10: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.20_summits.bed INFO @ Tue, 16 Jun 2020 13:40:10: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (3575 records, 4 fields): 5 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 13:40:45: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 13:41:13: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.10_peaks.xls INFO @ Tue, 16 Jun 2020 13:41:13: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.10_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 13:41:13: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX6619559/SRX6619559.10_summits.bed INFO @ Tue, 16 Jun 2020 13:41:13: Done! pass1 - making usageList (6 chroms): 2 millis pass2 - checking and writing primary data (9035 records, 4 fields): 10 millis CompletedMACS2peakCalling