Job ID = 6368860 SRX = SRX6619558 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-16T00:26:49 prefetch.2.10.7: 1) Downloading 'SRR9866051'... 2020-06-16T00:26:49 prefetch.2.10.7: Downloading via HTTPS... 2020-06-16T00:52:30 prefetch.2.10.7: HTTPS download succeed 2020-06-16T00:52:30 prefetch.2.10.7: 1) 'SRR9866051' was downloaded successfully 2020-06-16T00:52:30 prefetch.2.10.7: 'SRR9866051' has 0 unresolved dependencies Read 62434089 spots for SRR9866051/SRR9866051.sra Written 62434089 spots for SRR9866051/SRR9866051.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:27:55 62434089 reads; of these: 62434089 (100.00%) were paired; of these: 19709724 (31.57%) aligned concordantly 0 times 32268744 (51.68%) aligned concordantly exactly 1 time 10455621 (16.75%) aligned concordantly >1 times ---- 19709724 pairs aligned concordantly 0 times; of these: 11509481 (58.39%) aligned discordantly 1 time ---- 8200243 pairs aligned 0 times concordantly or discordantly; of these: 16400486 mates make up the pairs; of these: 6465010 (39.42%) aligned 0 times 3346315 (20.40%) aligned exactly 1 time 6589161 (40.18%) aligned >1 times 94.82% overall alignment rate Time searching: 02:27:55 Overall time: 02:27:55 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 88 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 9869882 / 54054884 = 0.1826 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 13:19:13: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 13:19:13: #1 read tag files... INFO @ Tue, 16 Jun 2020 13:19:13: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 13:19:22: 1000000 INFO @ Tue, 16 Jun 2020 13:19:31: 2000000 INFO @ Tue, 16 Jun 2020 13:19:39: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 13:19:44: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 13:19:44: #1 read tag files... INFO @ Tue, 16 Jun 2020 13:19:44: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 13:19:49: 4000000 INFO @ Tue, 16 Jun 2020 13:19:52: 1000000 INFO @ Tue, 16 Jun 2020 13:19:59: 5000000 INFO @ Tue, 16 Jun 2020 13:20:01: 2000000 INFO @ Tue, 16 Jun 2020 13:20:08: 6000000 INFO @ Tue, 16 Jun 2020 13:20:09: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 13:20:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 13:20:14: #1 read tag files... INFO @ Tue, 16 Jun 2020 13:20:14: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 13:20:18: 4000000 INFO @ Tue, 16 Jun 2020 13:20:18: 7000000 INFO @ Tue, 16 Jun 2020 13:20:22: 1000000 INFO @ Tue, 16 Jun 2020 13:20:26: 5000000 INFO @ Tue, 16 Jun 2020 13:20:27: 8000000 INFO @ Tue, 16 Jun 2020 13:20:31: 2000000 INFO @ Tue, 16 Jun 2020 13:20:35: 6000000 INFO @ Tue, 16 Jun 2020 13:20:37: 9000000 INFO @ Tue, 16 Jun 2020 13:20:40: 3000000 INFO @ Tue, 16 Jun 2020 13:20:43: 7000000 INFO @ Tue, 16 Jun 2020 13:20:47: 10000000 INFO @ Tue, 16 Jun 2020 13:20:48: 4000000 INFO @ Tue, 16 Jun 2020 13:20:51: 8000000 INFO @ Tue, 16 Jun 2020 13:20:56: 11000000 INFO @ Tue, 16 Jun 2020 13:20:56: 5000000 INFO @ Tue, 16 Jun 2020 13:21:00: 9000000 INFO @ Tue, 16 Jun 2020 13:21:05: 6000000 INFO @ Tue, 16 Jun 2020 13:21:05: 12000000 INFO @ Tue, 16 Jun 2020 13:21:08: 10000000 INFO @ Tue, 16 Jun 2020 13:21:13: 7000000 INFO @ Tue, 16 Jun 2020 13:21:15: 13000000 INFO @ Tue, 16 Jun 2020 13:21:17: 11000000 INFO @ Tue, 16 Jun 2020 13:21:21: 8000000 INFO @ Tue, 16 Jun 2020 13:21:24: 14000000 INFO @ Tue, 16 Jun 2020 13:21:25: 12000000 INFO @ Tue, 16 Jun 2020 13:21:30: 9000000 INFO @ Tue, 16 Jun 2020 13:21:33: 13000000 INFO @ Tue, 16 Jun 2020 13:21:34: 15000000 INFO @ Tue, 16 Jun 2020 13:21:38: 10000000 INFO @ Tue, 16 Jun 2020 13:21:41: 14000000 INFO @ Tue, 16 Jun 2020 13:21:43: 16000000 INFO @ Tue, 16 Jun 2020 13:21:46: 11000000 INFO @ Tue, 16 Jun 2020 13:21:50: 15000000 INFO @ Tue, 16 Jun 2020 13:21:53: 17000000 INFO @ Tue, 16 Jun 2020 13:21:54: 12000000 INFO @ Tue, 16 Jun 2020 13:21:58: 16000000 INFO @ Tue, 16 Jun 2020 13:22:02: 18000000 INFO @ Tue, 16 Jun 2020 13:22:03: 13000000 INFO @ Tue, 16 Jun 2020 13:22:06: 17000000 INFO @ Tue, 16 Jun 2020 13:22:11: 14000000 INFO @ Tue, 16 Jun 2020 13:22:11: 19000000 INFO @ Tue, 16 Jun 2020 13:22:14: 18000000 INFO @ Tue, 16 Jun 2020 13:22:19: 15000000 INFO @ Tue, 16 Jun 2020 13:22:20: 20000000 INFO @ Tue, 16 Jun 2020 13:22:22: 19000000 INFO @ Tue, 16 Jun 2020 13:22:27: 16000000 INFO @ Tue, 16 Jun 2020 13:22:30: 21000000 INFO @ Tue, 16 Jun 2020 13:22:30: 20000000 INFO @ Tue, 16 Jun 2020 13:22:35: 17000000 INFO @ Tue, 16 Jun 2020 13:22:38: 21000000 INFO @ Tue, 16 Jun 2020 13:22:39: 22000000 INFO @ Tue, 16 Jun 2020 13:22:43: 18000000 INFO @ Tue, 16 Jun 2020 13:22:46: 22000000 INFO @ Tue, 16 Jun 2020 13:22:49: 23000000 INFO @ Tue, 16 Jun 2020 13:22:51: 19000000 INFO @ Tue, 16 Jun 2020 13:22:55: 23000000 INFO @ Tue, 16 Jun 2020 13:22:59: 24000000 INFO @ Tue, 16 Jun 2020 13:22:59: 20000000 INFO @ Tue, 16 Jun 2020 13:23:03: 24000000 INFO @ Tue, 16 Jun 2020 13:23:07: 21000000 INFO @ Tue, 16 Jun 2020 13:23:08: 25000000 INFO @ Tue, 16 Jun 2020 13:23:11: 25000000 INFO @ Tue, 16 Jun 2020 13:23:16: 22000000 INFO @ Tue, 16 Jun 2020 13:23:17: 26000000 INFO @ Tue, 16 Jun 2020 13:23:20: 26000000 INFO @ Tue, 16 Jun 2020 13:23:24: 23000000 INFO @ Tue, 16 Jun 2020 13:23:26: 27000000 INFO @ Tue, 16 Jun 2020 13:23:30: 27000000 INFO @ Tue, 16 Jun 2020 13:23:32: 24000000 INFO @ Tue, 16 Jun 2020 13:23:35: 28000000 INFO @ Tue, 16 Jun 2020 13:23:39: 28000000 INFO @ Tue, 16 Jun 2020 13:23:40: 25000000 INFO @ Tue, 16 Jun 2020 13:23:43: 29000000 INFO @ Tue, 16 Jun 2020 13:23:49: 29000000 INFO @ Tue, 16 Jun 2020 13:23:49: 26000000 INFO @ Tue, 16 Jun 2020 13:23:51: 30000000 INFO @ Tue, 16 Jun 2020 13:23:59: 30000000 INFO @ Tue, 16 Jun 2020 13:23:59: 27000000 INFO @ Tue, 16 Jun 2020 13:24:00: 31000000 INFO @ Tue, 16 Jun 2020 13:24:08: 32000000 INFO @ Tue, 16 Jun 2020 13:24:09: 31000000 INFO @ Tue, 16 Jun 2020 13:24:09: 28000000 INFO @ Tue, 16 Jun 2020 13:24:17: 33000000 INFO @ Tue, 16 Jun 2020 13:24:19: 29000000 INFO @ Tue, 16 Jun 2020 13:24:19: 32000000 INFO @ Tue, 16 Jun 2020 13:24:25: 34000000 INFO @ Tue, 16 Jun 2020 13:24:28: 30000000 INFO @ Tue, 16 Jun 2020 13:24:28: 33000000 INFO @ Tue, 16 Jun 2020 13:24:35: 35000000 INFO @ Tue, 16 Jun 2020 13:24:38: 34000000 INFO @ Tue, 16 Jun 2020 13:24:38: 31000000 INFO @ Tue, 16 Jun 2020 13:24:44: 36000000 INFO @ Tue, 16 Jun 2020 13:24:46: 35000000 INFO @ Tue, 16 Jun 2020 13:24:48: 32000000 INFO @ Tue, 16 Jun 2020 13:24:54: 37000000 INFO @ Tue, 16 Jun 2020 13:24:55: 36000000 INFO @ Tue, 16 Jun 2020 13:24:57: 33000000 INFO @ Tue, 16 Jun 2020 13:25:04: 37000000 INFO @ Tue, 16 Jun 2020 13:25:04: 38000000 INFO @ Tue, 16 Jun 2020 13:25:06: 34000000 INFO @ Tue, 16 Jun 2020 13:25:13: 38000000 INFO @ Tue, 16 Jun 2020 13:25:15: 39000000 INFO @ Tue, 16 Jun 2020 13:25:15: 35000000 INFO @ Tue, 16 Jun 2020 13:25:21: 39000000 INFO @ Tue, 16 Jun 2020 13:25:24: 36000000 INFO @ Tue, 16 Jun 2020 13:25:25: 40000000 INFO @ Tue, 16 Jun 2020 13:25:30: 40000000 INFO @ Tue, 16 Jun 2020 13:25:32: 37000000 INFO @ Tue, 16 Jun 2020 13:25:35: 41000000 INFO @ Tue, 16 Jun 2020 13:25:39: 41000000 INFO @ Tue, 16 Jun 2020 13:25:41: 38000000 INFO @ Tue, 16 Jun 2020 13:25:45: 42000000 INFO @ Tue, 16 Jun 2020 13:25:47: 42000000 INFO @ Tue, 16 Jun 2020 13:25:49: 39000000 INFO @ Tue, 16 Jun 2020 13:25:55: 43000000 INFO @ Tue, 16 Jun 2020 13:25:56: 43000000 INFO @ Tue, 16 Jun 2020 13:25:58: 40000000 INFO @ Tue, 16 Jun 2020 13:26:06: 44000000 INFO @ Tue, 16 Jun 2020 13:26:06: 44000000 INFO @ Tue, 16 Jun 2020 13:26:06: 41000000 INFO @ Tue, 16 Jun 2020 13:26:15: 42000000 INFO @ Tue, 16 Jun 2020 13:26:16: 45000000 INFO @ Tue, 16 Jun 2020 13:26:17: 45000000 INFO @ Tue, 16 Jun 2020 13:26:24: 43000000 INFO @ Tue, 16 Jun 2020 13:26:27: 46000000 INFO @ Tue, 16 Jun 2020 13:26:28: 46000000 INFO @ Tue, 16 Jun 2020 13:26:33: 44000000 INFO @ Tue, 16 Jun 2020 13:26:38: 47000000 INFO @ Tue, 16 Jun 2020 13:26:39: 47000000 INFO @ Tue, 16 Jun 2020 13:26:41: 45000000 INFO @ Tue, 16 Jun 2020 13:26:49: 48000000 INFO @ Tue, 16 Jun 2020 13:26:49: 48000000 INFO @ Tue, 16 Jun 2020 13:26:50: 46000000 INFO @ Tue, 16 Jun 2020 13:26:59: 47000000 INFO @ Tue, 16 Jun 2020 13:26:59: 49000000 INFO @ Tue, 16 Jun 2020 13:27:00: 49000000 INFO @ Tue, 16 Jun 2020 13:27:07: 48000000 INFO @ Tue, 16 Jun 2020 13:27:10: 50000000 INFO @ Tue, 16 Jun 2020 13:27:11: 50000000 INFO @ Tue, 16 Jun 2020 13:27:16: 49000000 INFO @ Tue, 16 Jun 2020 13:27:21: 51000000 INFO @ Tue, 16 Jun 2020 13:27:21: 51000000 INFO @ Tue, 16 Jun 2020 13:27:25: 50000000 INFO @ Tue, 16 Jun 2020 13:27:31: 52000000 INFO @ Tue, 16 Jun 2020 13:27:32: 52000000 INFO @ Tue, 16 Jun 2020 13:27:33: 51000000 INFO @ Tue, 16 Jun 2020 13:27:42: 52000000 INFO @ Tue, 16 Jun 2020 13:27:42: 53000000 INFO @ Tue, 16 Jun 2020 13:27:43: 53000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 13:27:51: 53000000 INFO @ Tue, 16 Jun 2020 13:27:53: 54000000 INFO @ Tue, 16 Jun 2020 13:27:54: 54000000 INFO @ Tue, 16 Jun 2020 13:27:59: 54000000 INFO @ Tue, 16 Jun 2020 13:28:04: 55000000 INFO @ Tue, 16 Jun 2020 13:28:05: 55000000 INFO @ Tue, 16 Jun 2020 13:28:08: 55000000 INFO @ Tue, 16 Jun 2020 13:28:15: 56000000 INFO @ Tue, 16 Jun 2020 13:28:16: 56000000 INFO @ Tue, 16 Jun 2020 13:28:17: 56000000 INFO @ Tue, 16 Jun 2020 13:28:26: 57000000 INFO @ Tue, 16 Jun 2020 13:28:27: 57000000 INFO @ Tue, 16 Jun 2020 13:28:27: 57000000 INFO @ Tue, 16 Jun 2020 13:28:36: 58000000 INFO @ Tue, 16 Jun 2020 13:28:37: 58000000 INFO @ Tue, 16 Jun 2020 13:28:37: 58000000 INFO @ Tue, 16 Jun 2020 13:28:47: 59000000 INFO @ Tue, 16 Jun 2020 13:28:47: 59000000 INFO @ Tue, 16 Jun 2020 13:28:48: 59000000 INFO @ Tue, 16 Jun 2020 13:28:57: 60000000 INFO @ Tue, 16 Jun 2020 13:28:58: 60000000 INFO @ Tue, 16 Jun 2020 13:28:58: 60000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 13:29:07: 61000000 INFO @ Tue, 16 Jun 2020 13:29:08: 61000000 INFO @ Tue, 16 Jun 2020 13:29:09: 61000000 INFO @ Tue, 16 Jun 2020 13:29:18: 62000000 INFO @ Tue, 16 Jun 2020 13:29:19: 62000000 INFO @ Tue, 16 Jun 2020 13:29:19: 62000000 INFO @ Tue, 16 Jun 2020 13:29:28: 63000000 INFO @ Tue, 16 Jun 2020 13:29:29: 63000000 INFO @ Tue, 16 Jun 2020 13:29:29: 63000000 INFO @ Tue, 16 Jun 2020 13:29:38: 64000000 INFO @ Tue, 16 Jun 2020 13:29:39: 64000000 INFO @ Tue, 16 Jun 2020 13:29:39: 64000000 INFO @ Tue, 16 Jun 2020 13:29:48: 65000000 INFO @ Tue, 16 Jun 2020 13:29:49: 65000000 INFO @ Tue, 16 Jun 2020 13:29:50: 65000000 INFO @ Tue, 16 Jun 2020 13:29:59: 66000000 INFO @ Tue, 16 Jun 2020 13:29:59: 66000000 INFO @ Tue, 16 Jun 2020 13:30:00: 66000000 INFO @ Tue, 16 Jun 2020 13:30:09: 67000000 INFO @ Tue, 16 Jun 2020 13:30:10: 67000000 INFO @ Tue, 16 Jun 2020 13:30:10: 67000000 INFO @ Tue, 16 Jun 2020 13:30:20: 68000000 INFO @ Tue, 16 Jun 2020 13:30:21: 68000000 INFO @ Tue, 16 Jun 2020 13:30:21: 68000000 INFO @ Tue, 16 Jun 2020 13:30:30: 69000000 INFO @ Tue, 16 Jun 2020 13:30:31: 69000000 INFO @ Tue, 16 Jun 2020 13:30:31: 69000000 INFO @ Tue, 16 Jun 2020 13:30:40: 70000000 INFO @ Tue, 16 Jun 2020 13:30:41: 70000000 INFO @ Tue, 16 Jun 2020 13:30:42: 70000000 INFO @ Tue, 16 Jun 2020 13:30:51: 71000000 INFO @ Tue, 16 Jun 2020 13:30:52: 71000000 INFO @ Tue, 16 Jun 2020 13:30:52: 71000000 INFO @ Tue, 16 Jun 2020 13:31:01: 72000000 INFO @ Tue, 16 Jun 2020 13:31:02: 72000000 INFO @ Tue, 16 Jun 2020 13:31:03: 72000000 INFO @ Tue, 16 Jun 2020 13:31:12: 73000000 INFO @ Tue, 16 Jun 2020 13:31:13: 73000000 INFO @ Tue, 16 Jun 2020 13:31:13: 73000000 INFO @ Tue, 16 Jun 2020 13:31:22: 74000000 INFO @ Tue, 16 Jun 2020 13:31:23: 74000000 INFO @ Tue, 16 Jun 2020 13:31:23: 74000000 INFO @ Tue, 16 Jun 2020 13:31:33: 75000000 INFO @ Tue, 16 Jun 2020 13:31:34: 75000000 INFO @ Tue, 16 Jun 2020 13:31:34: 75000000 INFO @ Tue, 16 Jun 2020 13:31:43: 76000000 INFO @ Tue, 16 Jun 2020 13:31:44: 76000000 INFO @ Tue, 16 Jun 2020 13:31:44: 76000000 INFO @ Tue, 16 Jun 2020 13:31:53: 77000000 INFO @ Tue, 16 Jun 2020 13:31:54: 77000000 INFO @ Tue, 16 Jun 2020 13:31:55: 77000000 INFO @ Tue, 16 Jun 2020 13:32:04: 78000000 INFO @ Tue, 16 Jun 2020 13:32:05: 78000000 INFO @ Tue, 16 Jun 2020 13:32:05: 78000000 INFO @ Tue, 16 Jun 2020 13:32:14: 79000000 INFO @ Tue, 16 Jun 2020 13:32:15: 79000000 INFO @ Tue, 16 Jun 2020 13:32:16: 79000000 INFO @ Tue, 16 Jun 2020 13:32:25: 80000000 INFO @ Tue, 16 Jun 2020 13:32:26: 80000000 INFO @ Tue, 16 Jun 2020 13:32:26: 80000000 INFO @ Tue, 16 Jun 2020 13:32:35: 81000000 INFO @ Tue, 16 Jun 2020 13:32:36: 81000000 INFO @ Tue, 16 Jun 2020 13:32:37: 81000000 INFO @ Tue, 16 Jun 2020 13:32:45: 82000000 INFO @ Tue, 16 Jun 2020 13:32:46: 82000000 INFO @ Tue, 16 Jun 2020 13:32:47: 82000000 INFO @ Tue, 16 Jun 2020 13:32:56: 83000000 INFO @ Tue, 16 Jun 2020 13:32:57: 83000000 INFO @ Tue, 16 Jun 2020 13:32:57: 83000000 INFO @ Tue, 16 Jun 2020 13:33:06: 84000000 INFO @ Tue, 16 Jun 2020 13:33:07: 84000000 INFO @ Tue, 16 Jun 2020 13:33:08: 84000000 INFO @ Tue, 16 Jun 2020 13:33:17: 85000000 INFO @ Tue, 16 Jun 2020 13:33:17: 85000000 INFO @ Tue, 16 Jun 2020 13:33:18: 85000000 INFO @ Tue, 16 Jun 2020 13:33:27: 86000000 INFO @ Tue, 16 Jun 2020 13:33:28: 86000000 INFO @ Tue, 16 Jun 2020 13:33:28: 86000000 INFO @ Tue, 16 Jun 2020 13:33:37: 87000000 INFO @ Tue, 16 Jun 2020 13:33:38: 87000000 INFO @ Tue, 16 Jun 2020 13:33:39: 87000000 INFO @ Tue, 16 Jun 2020 13:33:48: 88000000 INFO @ Tue, 16 Jun 2020 13:33:49: 88000000 INFO @ Tue, 16 Jun 2020 13:33:49: 88000000 INFO @ Tue, 16 Jun 2020 13:33:58: 89000000 INFO @ Tue, 16 Jun 2020 13:33:59: 89000000 INFO @ Tue, 16 Jun 2020 13:34:00: 89000000 INFO @ Tue, 16 Jun 2020 13:34:09: 90000000 INFO @ Tue, 16 Jun 2020 13:34:10: 90000000 INFO @ Tue, 16 Jun 2020 13:34:10: 90000000 INFO @ Tue, 16 Jun 2020 13:34:19: 91000000 INFO @ Tue, 16 Jun 2020 13:34:20: 91000000 INFO @ Tue, 16 Jun 2020 13:34:20: 91000000 INFO @ Tue, 16 Jun 2020 13:34:29: 92000000 INFO @ Tue, 16 Jun 2020 13:34:30: 92000000 INFO @ Tue, 16 Jun 2020 13:34:31: 92000000 INFO @ Tue, 16 Jun 2020 13:34:39: 93000000 INFO @ Tue, 16 Jun 2020 13:34:40: 93000000 INFO @ Tue, 16 Jun 2020 13:34:41: 93000000 INFO @ Tue, 16 Jun 2020 13:34:49: 94000000 INFO @ Tue, 16 Jun 2020 13:34:50: 94000000 INFO @ Tue, 16 Jun 2020 13:34:51: 94000000 INFO @ Tue, 16 Jun 2020 13:34:59: 95000000 INFO @ Tue, 16 Jun 2020 13:34:59: 95000000 INFO @ Tue, 16 Jun 2020 13:35:00: 95000000 INFO @ Tue, 16 Jun 2020 13:35:08: 96000000 INFO @ Tue, 16 Jun 2020 13:35:09: 96000000 INFO @ Tue, 16 Jun 2020 13:35:10: 96000000 INFO @ Tue, 16 Jun 2020 13:35:19: 97000000 INFO @ Tue, 16 Jun 2020 13:35:20: 97000000 INFO @ Tue, 16 Jun 2020 13:35:20: 97000000 INFO @ Tue, 16 Jun 2020 13:35:29: 98000000 INFO @ Tue, 16 Jun 2020 13:35:30: 98000000 INFO @ Tue, 16 Jun 2020 13:35:30: 98000000 INFO @ Tue, 16 Jun 2020 13:35:36: #1 tag size is determined as 150 bps INFO @ Tue, 16 Jun 2020 13:35:36: #1 tag size = 150 INFO @ Tue, 16 Jun 2020 13:35:36: #1 total tags in treatment: 34536352 INFO @ Tue, 16 Jun 2020 13:35:36: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 13:35:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 13:35:36: #1 tags after filtering in treatment: 23207978 INFO @ Tue, 16 Jun 2020 13:35:36: #1 Redundant rate of treatment: 0.33 INFO @ Tue, 16 Jun 2020 13:35:36: #1 finished! INFO @ Tue, 16 Jun 2020 13:35:36: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 13:35:36: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 13:35:36: #1 tag size is determined as 150 bps INFO @ Tue, 16 Jun 2020 13:35:36: #1 tag size = 150 INFO @ Tue, 16 Jun 2020 13:35:36: #1 total tags in treatment: 34536352 INFO @ Tue, 16 Jun 2020 13:35:36: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 13:35:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 13:35:37: #1 tag size is determined as 150 bps INFO @ Tue, 16 Jun 2020 13:35:37: #1 tag size = 150 INFO @ Tue, 16 Jun 2020 13:35:37: #1 total tags in treatment: 34536352 INFO @ Tue, 16 Jun 2020 13:35:37: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 13:35:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 13:35:37: #1 tags after filtering in treatment: 23207978 INFO @ Tue, 16 Jun 2020 13:35:37: #1 Redundant rate of treatment: 0.33 INFO @ Tue, 16 Jun 2020 13:35:37: #1 finished! INFO @ Tue, 16 Jun 2020 13:35:37: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 13:35:37: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 13:35:38: #1 tags after filtering in treatment: 23207978 INFO @ Tue, 16 Jun 2020 13:35:38: #1 Redundant rate of treatment: 0.33 INFO @ Tue, 16 Jun 2020 13:35:38: #1 finished! INFO @ Tue, 16 Jun 2020 13:35:38: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 13:35:38: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 13:35:38: #2 number of paired peaks: 1539 INFO @ Tue, 16 Jun 2020 13:35:38: start model_add_line... INFO @ Tue, 16 Jun 2020 13:35:38: start X-correlation... INFO @ Tue, 16 Jun 2020 13:35:38: end of X-cor INFO @ Tue, 16 Jun 2020 13:35:38: #2 finished! INFO @ Tue, 16 Jun 2020 13:35:38: #2 predicted fragment length is 240 bps INFO @ Tue, 16 Jun 2020 13:35:38: #2 alternative fragment length(s) may be 4,240 bps INFO @ Tue, 16 Jun 2020 13:35:38: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.05_model.r WARNING @ Tue, 16 Jun 2020 13:35:38: #2 Since the d (240) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 13:35:38: #2 You may need to consider one of the other alternative d(s): 4,240 WARNING @ Tue, 16 Jun 2020 13:35:38: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 13:35:38: #3 Call peaks... INFO @ Tue, 16 Jun 2020 13:35:38: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 13:35:39: #2 number of paired peaks: 1539 INFO @ Tue, 16 Jun 2020 13:35:39: start model_add_line... INFO @ Tue, 16 Jun 2020 13:35:39: start X-correlation... INFO @ Tue, 16 Jun 2020 13:35:39: end of X-cor INFO @ Tue, 16 Jun 2020 13:35:39: #2 finished! INFO @ Tue, 16 Jun 2020 13:35:39: #2 predicted fragment length is 240 bps INFO @ Tue, 16 Jun 2020 13:35:39: #2 alternative fragment length(s) may be 4,240 bps INFO @ Tue, 16 Jun 2020 13:35:39: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.10_model.r WARNING @ Tue, 16 Jun 2020 13:35:39: #2 Since the d (240) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 13:35:39: #2 You may need to consider one of the other alternative d(s): 4,240 WARNING @ Tue, 16 Jun 2020 13:35:39: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 13:35:39: #3 Call peaks... INFO @ Tue, 16 Jun 2020 13:35:39: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 13:35:39: #2 number of paired peaks: 1539 INFO @ Tue, 16 Jun 2020 13:35:39: start model_add_line... INFO @ Tue, 16 Jun 2020 13:35:40: start X-correlation... INFO @ Tue, 16 Jun 2020 13:35:40: end of X-cor INFO @ Tue, 16 Jun 2020 13:35:40: #2 finished! INFO @ Tue, 16 Jun 2020 13:35:40: #2 predicted fragment length is 240 bps INFO @ Tue, 16 Jun 2020 13:35:40: #2 alternative fragment length(s) may be 4,240 bps INFO @ Tue, 16 Jun 2020 13:35:40: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.20_model.r WARNING @ Tue, 16 Jun 2020 13:35:40: #2 Since the d (240) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 16 Jun 2020 13:35:40: #2 You may need to consider one of the other alternative d(s): 4,240 WARNING @ Tue, 16 Jun 2020 13:35:40: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 16 Jun 2020 13:35:40: #3 Call peaks... INFO @ Tue, 16 Jun 2020 13:35:40: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 13:36:48: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 13:36:50: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 13:36:52: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 13:37:11: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.05_peaks.xls INFO @ Tue, 16 Jun 2020 13:37:11: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.05_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 13:37:11: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.05_summits.bed INFO @ Tue, 16 Jun 2020 13:37:11: Done! pass1 - making usageList (6 chroms): 3 millis pass2 - checking and writing primary data (19428 records, 4 fields): 19 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 13:37:14: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.10_peaks.xls INFO @ Tue, 16 Jun 2020 13:37:14: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.10_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 13:37:15: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.10_summits.bed INFO @ Tue, 16 Jun 2020 13:37:15: Done! pass1 - making usageList (6 chroms): 2 millis pass2 - checking and writing primary data (12255 records, 4 fields): 13 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 13:37:15: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.20_peaks.xls INFO @ Tue, 16 Jun 2020 13:37:15: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.20_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 13:37:15: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX6619558/SRX6619558.20_summits.bed INFO @ Tue, 16 Jun 2020 13:37:15: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (5809 records, 4 fields): 7 millis CompletedMACS2peakCalling