Job ID = 6367960 SRX = SRX4419828 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T23:52:03 prefetch.2.10.7: 1) Downloading 'SRR7553966'... 2020-06-15T23:52:03 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:55:50 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:55:50 prefetch.2.10.7: 1) 'SRR7553966' was downloaded successfully Read 24349879 spots for SRR7553966/SRR7553966.sra Written 24349879 spots for SRR7553966/SRR7553966.sra 2020-06-15T23:58:10 prefetch.2.10.7: 1) Downloading 'SRR7553967'... 2020-06-15T23:58:10 prefetch.2.10.7: Downloading via HTTPS... 2020-06-16T00:01:16 prefetch.2.10.7: HTTPS download succeed 2020-06-16T00:01:16 prefetch.2.10.7: 1) 'SRR7553967' was downloaded successfully Read 24745988 spots for SRR7553967/SRR7553967.sra Written 24745988 spots for SRR7553967/SRR7553967.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:43:57 49095867 reads; of these: 49095867 (100.00%) were paired; of these: 4543256 (9.25%) aligned concordantly 0 times 36972642 (75.31%) aligned concordantly exactly 1 time 7579969 (15.44%) aligned concordantly >1 times ---- 4543256 pairs aligned concordantly 0 times; of these: 1788414 (39.36%) aligned discordantly 1 time ---- 2754842 pairs aligned 0 times concordantly or discordantly; of these: 5509684 mates make up the pairs; of these: 3380387 (61.35%) aligned 0 times 1271488 (23.08%) aligned exactly 1 time 857809 (15.57%) aligned >1 times 96.56% overall alignment rate Time searching: 00:43:58 Overall time: 00:43:58 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 2580257 / 45513940 = 0.0567 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:14:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:14:40: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:14:40: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:14:47: 1000000 INFO @ Tue, 16 Jun 2020 10:14:53: 2000000 INFO @ Tue, 16 Jun 2020 10:15:00: 3000000 INFO @ Tue, 16 Jun 2020 10:15:06: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:15:10: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:15:10: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:15:10: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:15:13: 5000000 INFO @ Tue, 16 Jun 2020 10:15:19: 1000000 INFO @ Tue, 16 Jun 2020 10:15:21: 6000000 INFO @ Tue, 16 Jun 2020 10:15:27: 2000000 INFO @ Tue, 16 Jun 2020 10:15:28: 7000000 INFO @ Tue, 16 Jun 2020 10:15:35: 3000000 INFO @ Tue, 16 Jun 2020 10:15:36: 8000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:15:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:15:40: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:15:40: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:15:44: 4000000 INFO @ Tue, 16 Jun 2020 10:15:44: 9000000 INFO @ Tue, 16 Jun 2020 10:15:49: 1000000 INFO @ Tue, 16 Jun 2020 10:15:52: 10000000 INFO @ Tue, 16 Jun 2020 10:15:52: 5000000 INFO @ Tue, 16 Jun 2020 10:15:58: 2000000 INFO @ Tue, 16 Jun 2020 10:16:00: 11000000 INFO @ Tue, 16 Jun 2020 10:16:01: 6000000 INFO @ Tue, 16 Jun 2020 10:16:07: 3000000 INFO @ Tue, 16 Jun 2020 10:16:08: 12000000 INFO @ Tue, 16 Jun 2020 10:16:10: 7000000 INFO @ Tue, 16 Jun 2020 10:16:16: 4000000 INFO @ Tue, 16 Jun 2020 10:16:16: 13000000 INFO @ Tue, 16 Jun 2020 10:16:19: 8000000 INFO @ Tue, 16 Jun 2020 10:16:24: 5000000 INFO @ Tue, 16 Jun 2020 10:16:25: 14000000 INFO @ Tue, 16 Jun 2020 10:16:27: 9000000 INFO @ Tue, 16 Jun 2020 10:16:33: 6000000 INFO @ Tue, 16 Jun 2020 10:16:33: 15000000 INFO @ Tue, 16 Jun 2020 10:16:36: 10000000 INFO @ Tue, 16 Jun 2020 10:16:42: 16000000 INFO @ Tue, 16 Jun 2020 10:16:43: 7000000 INFO @ Tue, 16 Jun 2020 10:16:45: 11000000 INFO @ Tue, 16 Jun 2020 10:16:50: 17000000 INFO @ Tue, 16 Jun 2020 10:16:52: 8000000 INFO @ Tue, 16 Jun 2020 10:16:53: 12000000 INFO @ Tue, 16 Jun 2020 10:16:59: 18000000 INFO @ Tue, 16 Jun 2020 10:17:02: 9000000 INFO @ Tue, 16 Jun 2020 10:17:02: 13000000 INFO @ Tue, 16 Jun 2020 10:17:07: 19000000 INFO @ Tue, 16 Jun 2020 10:17:11: 14000000 INFO @ Tue, 16 Jun 2020 10:17:12: 10000000 INFO @ Tue, 16 Jun 2020 10:17:16: 20000000 INFO @ Tue, 16 Jun 2020 10:17:19: 15000000 INFO @ Tue, 16 Jun 2020 10:17:22: 11000000 INFO @ Tue, 16 Jun 2020 10:17:24: 21000000 INFO @ Tue, 16 Jun 2020 10:17:28: 16000000 INFO @ Tue, 16 Jun 2020 10:17:32: 12000000 INFO @ Tue, 16 Jun 2020 10:17:32: 22000000 INFO @ Tue, 16 Jun 2020 10:17:37: 17000000 INFO @ Tue, 16 Jun 2020 10:17:41: 23000000 INFO @ Tue, 16 Jun 2020 10:17:41: 13000000 INFO @ Tue, 16 Jun 2020 10:17:45: 18000000 INFO @ Tue, 16 Jun 2020 10:17:49: 24000000 INFO @ Tue, 16 Jun 2020 10:17:51: 14000000 INFO @ Tue, 16 Jun 2020 10:17:54: 19000000 INFO @ Tue, 16 Jun 2020 10:17:57: 25000000 INFO @ Tue, 16 Jun 2020 10:18:01: 15000000 INFO @ Tue, 16 Jun 2020 10:18:03: 20000000 INFO @ Tue, 16 Jun 2020 10:18:06: 26000000 INFO @ Tue, 16 Jun 2020 10:18:10: 16000000 INFO @ Tue, 16 Jun 2020 10:18:11: 21000000 INFO @ Tue, 16 Jun 2020 10:18:14: 27000000 INFO @ Tue, 16 Jun 2020 10:18:20: 17000000 INFO @ Tue, 16 Jun 2020 10:18:20: 22000000 INFO @ Tue, 16 Jun 2020 10:18:23: 28000000 INFO @ Tue, 16 Jun 2020 10:18:28: 23000000 INFO @ Tue, 16 Jun 2020 10:18:29: 18000000 INFO @ Tue, 16 Jun 2020 10:18:31: 29000000 INFO @ Tue, 16 Jun 2020 10:18:37: 24000000 INFO @ Tue, 16 Jun 2020 10:18:39: 19000000 INFO @ Tue, 16 Jun 2020 10:18:40: 30000000 INFO @ Tue, 16 Jun 2020 10:18:46: 25000000 INFO @ Tue, 16 Jun 2020 10:18:48: 31000000 INFO @ Tue, 16 Jun 2020 10:18:48: 20000000 INFO @ Tue, 16 Jun 2020 10:18:54: 26000000 INFO @ Tue, 16 Jun 2020 10:18:55: 32000000 INFO @ Tue, 16 Jun 2020 10:18:57: 21000000 INFO @ Tue, 16 Jun 2020 10:19:03: 27000000 INFO @ Tue, 16 Jun 2020 10:19:03: 33000000 INFO @ Tue, 16 Jun 2020 10:19:06: 22000000 INFO @ Tue, 16 Jun 2020 10:19:11: 34000000 INFO @ Tue, 16 Jun 2020 10:19:12: 28000000 INFO @ Tue, 16 Jun 2020 10:19:15: 23000000 INFO @ Tue, 16 Jun 2020 10:19:19: 35000000 INFO @ Tue, 16 Jun 2020 10:19:20: 29000000 INFO @ Tue, 16 Jun 2020 10:19:24: 24000000 INFO @ Tue, 16 Jun 2020 10:19:27: 36000000 INFO @ Tue, 16 Jun 2020 10:19:28: 30000000 INFO @ Tue, 16 Jun 2020 10:19:33: 25000000 INFO @ Tue, 16 Jun 2020 10:19:35: 37000000 INFO @ Tue, 16 Jun 2020 10:19:36: 31000000 INFO @ Tue, 16 Jun 2020 10:19:41: 26000000 INFO @ Tue, 16 Jun 2020 10:19:43: 38000000 INFO @ Tue, 16 Jun 2020 10:19:44: 32000000 INFO @ Tue, 16 Jun 2020 10:19:49: 27000000 INFO @ Tue, 16 Jun 2020 10:19:51: 39000000 INFO @ Tue, 16 Jun 2020 10:19:51: 33000000 INFO @ Tue, 16 Jun 2020 10:19:57: 28000000 INFO @ Tue, 16 Jun 2020 10:19:59: 34000000 INFO @ Tue, 16 Jun 2020 10:19:59: 40000000 INFO @ Tue, 16 Jun 2020 10:20:04: 29000000 INFO @ Tue, 16 Jun 2020 10:20:06: 35000000 INFO @ Tue, 16 Jun 2020 10:20:07: 41000000 INFO @ Tue, 16 Jun 2020 10:20:12: 30000000 INFO @ Tue, 16 Jun 2020 10:20:14: 36000000 INFO @ Tue, 16 Jun 2020 10:20:15: 42000000 INFO @ Tue, 16 Jun 2020 10:20:20: 31000000 INFO @ Tue, 16 Jun 2020 10:20:22: 37000000 INFO @ Tue, 16 Jun 2020 10:20:23: 43000000 INFO @ Tue, 16 Jun 2020 10:20:28: 32000000 INFO @ Tue, 16 Jun 2020 10:20:30: 38000000 INFO @ Tue, 16 Jun 2020 10:20:31: 44000000 INFO @ Tue, 16 Jun 2020 10:20:35: 33000000 INFO @ Tue, 16 Jun 2020 10:20:37: 39000000 INFO @ Tue, 16 Jun 2020 10:20:38: 45000000 INFO @ Tue, 16 Jun 2020 10:20:43: 34000000 INFO @ Tue, 16 Jun 2020 10:20:45: 40000000 INFO @ Tue, 16 Jun 2020 10:20:46: 46000000 INFO @ Tue, 16 Jun 2020 10:20:51: 35000000 INFO @ Tue, 16 Jun 2020 10:20:53: 41000000 INFO @ Tue, 16 Jun 2020 10:20:53: 47000000 INFO @ Tue, 16 Jun 2020 10:20:59: 36000000 INFO @ Tue, 16 Jun 2020 10:21:01: 48000000 INFO @ Tue, 16 Jun 2020 10:21:02: 42000000 INFO @ Tue, 16 Jun 2020 10:21:06: 37000000 INFO @ Tue, 16 Jun 2020 10:21:09: 49000000 INFO @ Tue, 16 Jun 2020 10:21:10: 43000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 10:21:14: 38000000 INFO @ Tue, 16 Jun 2020 10:21:17: 50000000 INFO @ Tue, 16 Jun 2020 10:21:18: 44000000 INFO @ Tue, 16 Jun 2020 10:21:22: 39000000 INFO @ Tue, 16 Jun 2020 10:21:25: 51000000 INFO @ Tue, 16 Jun 2020 10:21:26: 45000000 INFO @ Tue, 16 Jun 2020 10:21:29: 40000000 INFO @ Tue, 16 Jun 2020 10:21:32: 52000000 INFO @ Tue, 16 Jun 2020 10:21:34: 46000000 INFO @ Tue, 16 Jun 2020 10:21:37: 41000000 INFO @ Tue, 16 Jun 2020 10:21:40: 53000000 INFO @ Tue, 16 Jun 2020 10:21:42: 47000000 INFO @ Tue, 16 Jun 2020 10:21:44: 42000000 INFO @ Tue, 16 Jun 2020 10:21:48: 54000000 INFO @ Tue, 16 Jun 2020 10:21:50: 48000000 INFO @ Tue, 16 Jun 2020 10:21:52: 43000000 INFO @ Tue, 16 Jun 2020 10:21:55: 55000000 INFO @ Tue, 16 Jun 2020 10:21:58: 49000000 INFO @ Tue, 16 Jun 2020 10:21:59: 44000000 INFO @ Tue, 16 Jun 2020 10:22:03: 56000000 INFO @ Tue, 16 Jun 2020 10:22:05: 50000000 INFO @ Tue, 16 Jun 2020 10:22:07: 45000000 INFO @ Tue, 16 Jun 2020 10:22:11: 57000000 INFO @ Tue, 16 Jun 2020 10:22:14: 51000000 INFO @ Tue, 16 Jun 2020 10:22:14: 46000000 INFO @ Tue, 16 Jun 2020 10:22:19: 58000000 INFO @ Tue, 16 Jun 2020 10:22:21: 47000000 INFO @ Tue, 16 Jun 2020 10:22:22: 52000000 INFO @ Tue, 16 Jun 2020 10:22:26: 59000000 INFO @ Tue, 16 Jun 2020 10:22:29: 48000000 INFO @ Tue, 16 Jun 2020 10:22:30: 53000000 INFO @ Tue, 16 Jun 2020 10:22:34: 60000000 INFO @ Tue, 16 Jun 2020 10:22:37: 49000000 INFO @ Tue, 16 Jun 2020 10:22:38: 54000000 INFO @ Tue, 16 Jun 2020 10:22:42: 61000000 INFO @ Tue, 16 Jun 2020 10:22:44: 50000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 10:22:47: 55000000 INFO @ Tue, 16 Jun 2020 10:22:50: 62000000 INFO @ Tue, 16 Jun 2020 10:22:53: 51000000 INFO @ Tue, 16 Jun 2020 10:22:55: 56000000 INFO @ Tue, 16 Jun 2020 10:22:57: 63000000 INFO @ Tue, 16 Jun 2020 10:23:01: 52000000 INFO @ Tue, 16 Jun 2020 10:23:03: 57000000 INFO @ Tue, 16 Jun 2020 10:23:05: 64000000 INFO @ Tue, 16 Jun 2020 10:23:10: 53000000 INFO @ Tue, 16 Jun 2020 10:23:11: 58000000 INFO @ Tue, 16 Jun 2020 10:23:13: 65000000 INFO @ Tue, 16 Jun 2020 10:23:18: 54000000 INFO @ Tue, 16 Jun 2020 10:23:20: 59000000 INFO @ Tue, 16 Jun 2020 10:23:21: 66000000 INFO @ Tue, 16 Jun 2020 10:23:26: 55000000 INFO @ Tue, 16 Jun 2020 10:23:28: 60000000 INFO @ Tue, 16 Jun 2020 10:23:29: 67000000 INFO @ Tue, 16 Jun 2020 10:23:34: 56000000 INFO @ Tue, 16 Jun 2020 10:23:36: 61000000 INFO @ Tue, 16 Jun 2020 10:23:37: 68000000 INFO @ Tue, 16 Jun 2020 10:23:43: 57000000 INFO @ Tue, 16 Jun 2020 10:23:44: 62000000 INFO @ Tue, 16 Jun 2020 10:23:44: 69000000 INFO @ Tue, 16 Jun 2020 10:23:51: 58000000 INFO @ Tue, 16 Jun 2020 10:23:52: 63000000 INFO @ Tue, 16 Jun 2020 10:23:52: 70000000 INFO @ Tue, 16 Jun 2020 10:24:00: 71000000 INFO @ Tue, 16 Jun 2020 10:24:00: 64000000 INFO @ Tue, 16 Jun 2020 10:24:00: 59000000 INFO @ Tue, 16 Jun 2020 10:24:07: 72000000 INFO @ Tue, 16 Jun 2020 10:24:08: 65000000 INFO @ Tue, 16 Jun 2020 10:24:09: 60000000 INFO @ Tue, 16 Jun 2020 10:24:15: 73000000 INFO @ Tue, 16 Jun 2020 10:24:16: 66000000 INFO @ Tue, 16 Jun 2020 10:24:17: 61000000 INFO @ Tue, 16 Jun 2020 10:24:23: 74000000 INFO @ Tue, 16 Jun 2020 10:24:24: 67000000 INFO @ Tue, 16 Jun 2020 10:24:25: 62000000 INFO @ Tue, 16 Jun 2020 10:24:30: 75000000 INFO @ Tue, 16 Jun 2020 10:24:32: 68000000 INFO @ Tue, 16 Jun 2020 10:24:33: 63000000 INFO @ Tue, 16 Jun 2020 10:24:38: 76000000 INFO @ Tue, 16 Jun 2020 10:24:40: 69000000 INFO @ Tue, 16 Jun 2020 10:24:41: 64000000 INFO @ Tue, 16 Jun 2020 10:24:46: 77000000 INFO @ Tue, 16 Jun 2020 10:24:48: 70000000 INFO @ Tue, 16 Jun 2020 10:24:49: 65000000 INFO @ Tue, 16 Jun 2020 10:24:53: 78000000 INFO @ Tue, 16 Jun 2020 10:24:56: 71000000 INFO @ Tue, 16 Jun 2020 10:24:57: 66000000 INFO @ Tue, 16 Jun 2020 10:25:01: 79000000 INFO @ Tue, 16 Jun 2020 10:25:04: 72000000 INFO @ Tue, 16 Jun 2020 10:25:05: 67000000 INFO @ Tue, 16 Jun 2020 10:25:08: 80000000 INFO @ Tue, 16 Jun 2020 10:25:12: 73000000 INFO @ Tue, 16 Jun 2020 10:25:14: 68000000 INFO @ Tue, 16 Jun 2020 10:25:16: 81000000 INFO @ Tue, 16 Jun 2020 10:25:20: 74000000 INFO @ Tue, 16 Jun 2020 10:25:22: 69000000 INFO @ Tue, 16 Jun 2020 10:25:24: 82000000 INFO @ Tue, 16 Jun 2020 10:25:28: 75000000 INFO @ Tue, 16 Jun 2020 10:25:30: 70000000 INFO @ Tue, 16 Jun 2020 10:25:31: 83000000 INFO @ Tue, 16 Jun 2020 10:25:36: 76000000 INFO @ Tue, 16 Jun 2020 10:25:38: 71000000 INFO @ Tue, 16 Jun 2020 10:25:39: 84000000 INFO @ Tue, 16 Jun 2020 10:25:44: 77000000 INFO @ Tue, 16 Jun 2020 10:25:46: 72000000 INFO @ Tue, 16 Jun 2020 10:25:46: 85000000 INFO @ Tue, 16 Jun 2020 10:25:52: 78000000 INFO @ Tue, 16 Jun 2020 10:25:54: 86000000 INFO @ Tue, 16 Jun 2020 10:25:54: 73000000 INFO @ Tue, 16 Jun 2020 10:26:00: 79000000 INFO @ Tue, 16 Jun 2020 10:26:01: 87000000 INFO @ Tue, 16 Jun 2020 10:26:02: 74000000 INFO @ Tue, 16 Jun 2020 10:26:08: 80000000 INFO @ Tue, 16 Jun 2020 10:26:08: 88000000 INFO @ Tue, 16 Jun 2020 10:26:11: 75000000 INFO @ Tue, 16 Jun 2020 10:26:16: 89000000 INFO @ Tue, 16 Jun 2020 10:26:16: 81000000 INFO @ Tue, 16 Jun 2020 10:26:19: 76000000 INFO @ Tue, 16 Jun 2020 10:26:21: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 10:26:21: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 10:26:21: #1 total tags in treatment: 41982098 INFO @ Tue, 16 Jun 2020 10:26:21: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:26:21: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:26:22: #1 tags after filtering in treatment: 29987317 INFO @ Tue, 16 Jun 2020 10:26:22: #1 Redundant rate of treatment: 0.29 INFO @ Tue, 16 Jun 2020 10:26:22: #1 finished! INFO @ Tue, 16 Jun 2020 10:26:22: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:26:22: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:26:24: #2 number of paired peaks: 57 WARNING @ Tue, 16 Jun 2020 10:26:24: Too few paired peaks (57) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:26:24: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:26:24: 82000000 INFO @ Tue, 16 Jun 2020 10:26:27: 77000000 INFO @ Tue, 16 Jun 2020 10:26:32: 83000000 INFO @ Tue, 16 Jun 2020 10:26:34: 78000000 INFO @ Tue, 16 Jun 2020 10:26:40: 84000000 INFO @ Tue, 16 Jun 2020 10:26:42: 79000000 INFO @ Tue, 16 Jun 2020 10:26:48: 85000000 INFO @ Tue, 16 Jun 2020 10:26:50: 80000000 INFO @ Tue, 16 Jun 2020 10:26:55: 86000000 INFO @ Tue, 16 Jun 2020 10:26:58: 81000000 INFO @ Tue, 16 Jun 2020 10:27:02: 87000000 INFO @ Tue, 16 Jun 2020 10:27:06: 82000000 INFO @ Tue, 16 Jun 2020 10:27:10: 88000000 INFO @ Tue, 16 Jun 2020 10:27:13: 83000000 INFO @ Tue, 16 Jun 2020 10:27:17: 89000000 INFO @ Tue, 16 Jun 2020 10:27:21: 84000000 INFO @ Tue, 16 Jun 2020 10:27:22: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 10:27:22: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 10:27:22: #1 total tags in treatment: 41982098 INFO @ Tue, 16 Jun 2020 10:27:22: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:27:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:27:23: #1 tags after filtering in treatment: 29987317 INFO @ Tue, 16 Jun 2020 10:27:23: #1 Redundant rate of treatment: 0.29 INFO @ Tue, 16 Jun 2020 10:27:23: #1 finished! INFO @ Tue, 16 Jun 2020 10:27:23: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:27:23: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:27:25: #2 number of paired peaks: 57 WARNING @ Tue, 16 Jun 2020 10:27:25: Too few paired peaks (57) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:27:25: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:27:28: 85000000 INFO @ Tue, 16 Jun 2020 10:27:34: 86000000 INFO @ Tue, 16 Jun 2020 10:27:41: 87000000 INFO @ Tue, 16 Jun 2020 10:27:48: 88000000 INFO @ Tue, 16 Jun 2020 10:27:55: 89000000 INFO @ Tue, 16 Jun 2020 10:28:00: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 10:28:00: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 10:28:00: #1 total tags in treatment: 41982098 INFO @ Tue, 16 Jun 2020 10:28:00: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:28:00: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:28:00: #1 tags after filtering in treatment: 29987317 INFO @ Tue, 16 Jun 2020 10:28:00: #1 Redundant rate of treatment: 0.29 INFO @ Tue, 16 Jun 2020 10:28:00: #1 finished! INFO @ Tue, 16 Jun 2020 10:28:00: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:28:00: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:28:02: #2 number of paired peaks: 57 WARNING @ Tue, 16 Jun 2020 10:28:02: Too few paired peaks (57) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:28:02: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4419828/SRX4419828.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling