Job ID = 6367840 SRX = SRX4085408 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T23:37:14 prefetch.2.10.7: 1) Downloading 'SRR7167437'... 2020-06-15T23:37:14 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:53:13 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:53:13 prefetch.2.10.7: 1) 'SRR7167437' was downloaded successfully Read 44324711 spots for SRR7167437/SRR7167437.sra Written 44324711 spots for SRR7167437/SRR7167437.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:41:46 44324711 reads; of these: 44324711 (100.00%) were paired; of these: 2163279 (4.88%) aligned concordantly 0 times 34586498 (78.03%) aligned concordantly exactly 1 time 7574934 (17.09%) aligned concordantly >1 times ---- 2163279 pairs aligned concordantly 0 times; of these: 762223 (35.23%) aligned discordantly 1 time ---- 1401056 pairs aligned 0 times concordantly or discordantly; of these: 2802112 mates make up the pairs; of these: 1476741 (52.70%) aligned 0 times 831465 (29.67%) aligned exactly 1 time 493906 (17.63%) aligned >1 times 98.33% overall alignment rate Time searching: 00:41:46 Overall time: 00:41:46 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 2760874 / 42572403 = 0.0649 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:03:04: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:03:04: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:03:04: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:03:10: 1000000 INFO @ Tue, 16 Jun 2020 10:03:16: 2000000 INFO @ Tue, 16 Jun 2020 10:03:22: 3000000 INFO @ Tue, 16 Jun 2020 10:03:29: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:03:34: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:03:34: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:03:34: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:03:35: 5000000 INFO @ Tue, 16 Jun 2020 10:03:43: 6000000 INFO @ Tue, 16 Jun 2020 10:03:43: 1000000 INFO @ Tue, 16 Jun 2020 10:03:50: 7000000 INFO @ Tue, 16 Jun 2020 10:03:53: 2000000 INFO @ Tue, 16 Jun 2020 10:03:58: 8000000 INFO @ Tue, 16 Jun 2020 10:04:01: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:04:04: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:04:04: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:04:04: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:04:06: 9000000 INFO @ Tue, 16 Jun 2020 10:04:10: 4000000 INFO @ Tue, 16 Jun 2020 10:04:12: 1000000 INFO @ Tue, 16 Jun 2020 10:04:14: 10000000 INFO @ Tue, 16 Jun 2020 10:04:19: 5000000 INFO @ Tue, 16 Jun 2020 10:04:20: 2000000 INFO @ Tue, 16 Jun 2020 10:04:22: 11000000 INFO @ Tue, 16 Jun 2020 10:04:27: 6000000 INFO @ Tue, 16 Jun 2020 10:04:28: 3000000 INFO @ Tue, 16 Jun 2020 10:04:30: 12000000 INFO @ Tue, 16 Jun 2020 10:04:35: 4000000 INFO @ Tue, 16 Jun 2020 10:04:36: 7000000 INFO @ Tue, 16 Jun 2020 10:04:38: 13000000 INFO @ Tue, 16 Jun 2020 10:04:43: 5000000 INFO @ Tue, 16 Jun 2020 10:04:44: 8000000 INFO @ Tue, 16 Jun 2020 10:04:45: 14000000 INFO @ Tue, 16 Jun 2020 10:04:51: 6000000 INFO @ Tue, 16 Jun 2020 10:04:53: 9000000 INFO @ Tue, 16 Jun 2020 10:04:53: 15000000 INFO @ Tue, 16 Jun 2020 10:04:59: 7000000 INFO @ Tue, 16 Jun 2020 10:05:01: 16000000 INFO @ Tue, 16 Jun 2020 10:05:02: 10000000 INFO @ Tue, 16 Jun 2020 10:05:06: 8000000 INFO @ Tue, 16 Jun 2020 10:05:09: 17000000 INFO @ Tue, 16 Jun 2020 10:05:10: 11000000 INFO @ Tue, 16 Jun 2020 10:05:14: 9000000 INFO @ Tue, 16 Jun 2020 10:05:17: 18000000 INFO @ Tue, 16 Jun 2020 10:05:19: 12000000 INFO @ Tue, 16 Jun 2020 10:05:22: 10000000 INFO @ Tue, 16 Jun 2020 10:05:24: 19000000 INFO @ Tue, 16 Jun 2020 10:05:28: 13000000 INFO @ Tue, 16 Jun 2020 10:05:29: 11000000 INFO @ Tue, 16 Jun 2020 10:05:32: 20000000 INFO @ Tue, 16 Jun 2020 10:05:36: 14000000 INFO @ Tue, 16 Jun 2020 10:05:37: 12000000 INFO @ Tue, 16 Jun 2020 10:05:40: 21000000 INFO @ Tue, 16 Jun 2020 10:05:45: 15000000 INFO @ Tue, 16 Jun 2020 10:05:45: 13000000 INFO @ Tue, 16 Jun 2020 10:05:47: 22000000 INFO @ Tue, 16 Jun 2020 10:05:53: 14000000 INFO @ Tue, 16 Jun 2020 10:05:53: 16000000 INFO @ Tue, 16 Jun 2020 10:05:55: 23000000 INFO @ Tue, 16 Jun 2020 10:06:00: 15000000 INFO @ Tue, 16 Jun 2020 10:06:01: 17000000 INFO @ Tue, 16 Jun 2020 10:06:03: 24000000 INFO @ Tue, 16 Jun 2020 10:06:08: 16000000 INFO @ Tue, 16 Jun 2020 10:06:10: 18000000 INFO @ Tue, 16 Jun 2020 10:06:11: 25000000 INFO @ Tue, 16 Jun 2020 10:06:16: 17000000 INFO @ Tue, 16 Jun 2020 10:06:18: 19000000 INFO @ Tue, 16 Jun 2020 10:06:19: 26000000 INFO @ Tue, 16 Jun 2020 10:06:24: 18000000 INFO @ Tue, 16 Jun 2020 10:06:26: 27000000 INFO @ Tue, 16 Jun 2020 10:06:27: 20000000 INFO @ Tue, 16 Jun 2020 10:06:31: 19000000 INFO @ Tue, 16 Jun 2020 10:06:34: 28000000 INFO @ Tue, 16 Jun 2020 10:06:35: 21000000 INFO @ Tue, 16 Jun 2020 10:06:39: 20000000 INFO @ Tue, 16 Jun 2020 10:06:42: 29000000 INFO @ Tue, 16 Jun 2020 10:06:44: 22000000 INFO @ Tue, 16 Jun 2020 10:06:47: 21000000 INFO @ Tue, 16 Jun 2020 10:06:50: 30000000 INFO @ Tue, 16 Jun 2020 10:06:52: 23000000 INFO @ Tue, 16 Jun 2020 10:06:54: 22000000 INFO @ Tue, 16 Jun 2020 10:06:57: 31000000 INFO @ Tue, 16 Jun 2020 10:07:00: 24000000 INFO @ Tue, 16 Jun 2020 10:07:02: 23000000 INFO @ Tue, 16 Jun 2020 10:07:05: 32000000 INFO @ Tue, 16 Jun 2020 10:07:09: 25000000 INFO @ Tue, 16 Jun 2020 10:07:10: 24000000 INFO @ Tue, 16 Jun 2020 10:07:13: 33000000 INFO @ Tue, 16 Jun 2020 10:07:17: 26000000 INFO @ Tue, 16 Jun 2020 10:07:18: 25000000 INFO @ Tue, 16 Jun 2020 10:07:21: 34000000 INFO @ Tue, 16 Jun 2020 10:07:26: 26000000 INFO @ Tue, 16 Jun 2020 10:07:26: 27000000 INFO @ Tue, 16 Jun 2020 10:07:29: 35000000 INFO @ Tue, 16 Jun 2020 10:07:33: 27000000 INFO @ Tue, 16 Jun 2020 10:07:34: 28000000 INFO @ Tue, 16 Jun 2020 10:07:36: 36000000 INFO @ Tue, 16 Jun 2020 10:07:41: 28000000 INFO @ Tue, 16 Jun 2020 10:07:42: 29000000 INFO @ Tue, 16 Jun 2020 10:07:44: 37000000 INFO @ Tue, 16 Jun 2020 10:07:49: 29000000 INFO @ Tue, 16 Jun 2020 10:07:51: 30000000 INFO @ Tue, 16 Jun 2020 10:07:52: 38000000 INFO @ Tue, 16 Jun 2020 10:07:57: 30000000 INFO @ Tue, 16 Jun 2020 10:07:59: 31000000 INFO @ Tue, 16 Jun 2020 10:08:00: 39000000 INFO @ Tue, 16 Jun 2020 10:08:05: 31000000 INFO @ Tue, 16 Jun 2020 10:08:07: 32000000 INFO @ Tue, 16 Jun 2020 10:08:08: 40000000 INFO @ Tue, 16 Jun 2020 10:08:12: 32000000 INFO @ Tue, 16 Jun 2020 10:08:15: 41000000 INFO @ Tue, 16 Jun 2020 10:08:15: 33000000 INFO @ Tue, 16 Jun 2020 10:08:20: 33000000 INFO @ Tue, 16 Jun 2020 10:08:23: 42000000 INFO @ Tue, 16 Jun 2020 10:08:24: 34000000 INFO @ Tue, 16 Jun 2020 10:08:28: 34000000 INFO @ Tue, 16 Jun 2020 10:08:31: 43000000 INFO @ Tue, 16 Jun 2020 10:08:32: 35000000 INFO @ Tue, 16 Jun 2020 10:08:35: 35000000 INFO @ Tue, 16 Jun 2020 10:08:38: 44000000 INFO @ Tue, 16 Jun 2020 10:08:40: 36000000 INFO @ Tue, 16 Jun 2020 10:08:43: 36000000 INFO @ Tue, 16 Jun 2020 10:08:46: 45000000 INFO @ Tue, 16 Jun 2020 10:08:48: 37000000 INFO @ Tue, 16 Jun 2020 10:08:51: 37000000 INFO @ Tue, 16 Jun 2020 10:08:53: 46000000 INFO @ Tue, 16 Jun 2020 10:08:57: 38000000 INFO @ Tue, 16 Jun 2020 10:08:58: 38000000 INFO @ Tue, 16 Jun 2020 10:09:01: 47000000 INFO @ Tue, 16 Jun 2020 10:09:05: 39000000 INFO @ Tue, 16 Jun 2020 10:09:06: 39000000 INFO @ Tue, 16 Jun 2020 10:09:09: 48000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 10:09:13: 40000000 INFO @ Tue, 16 Jun 2020 10:09:14: 40000000 INFO @ Tue, 16 Jun 2020 10:09:16: 49000000 INFO @ Tue, 16 Jun 2020 10:09:22: 41000000 INFO @ Tue, 16 Jun 2020 10:09:22: 41000000 INFO @ Tue, 16 Jun 2020 10:09:24: 50000000 INFO @ Tue, 16 Jun 2020 10:09:31: 42000000 INFO @ Tue, 16 Jun 2020 10:09:31: 42000000 INFO @ Tue, 16 Jun 2020 10:09:31: 51000000 INFO @ Tue, 16 Jun 2020 10:09:39: 52000000 INFO @ Tue, 16 Jun 2020 10:09:39: 43000000 INFO @ Tue, 16 Jun 2020 10:09:40: 43000000 INFO @ Tue, 16 Jun 2020 10:09:46: 53000000 INFO @ Tue, 16 Jun 2020 10:09:47: 44000000 INFO @ Tue, 16 Jun 2020 10:09:48: 44000000 INFO @ Tue, 16 Jun 2020 10:09:54: 54000000 INFO @ Tue, 16 Jun 2020 10:09:54: 45000000 INFO @ Tue, 16 Jun 2020 10:09:57: 45000000 INFO @ Tue, 16 Jun 2020 10:10:01: 55000000 INFO @ Tue, 16 Jun 2020 10:10:02: 46000000 INFO @ Tue, 16 Jun 2020 10:10:06: 46000000 INFO @ Tue, 16 Jun 2020 10:10:09: 56000000 INFO @ Tue, 16 Jun 2020 10:10:10: 47000000 INFO @ Tue, 16 Jun 2020 10:10:14: 47000000 INFO @ Tue, 16 Jun 2020 10:10:17: 57000000 INFO @ Tue, 16 Jun 2020 10:10:17: 48000000 INFO @ Tue, 16 Jun 2020 10:10:22: 48000000 INFO @ Tue, 16 Jun 2020 10:10:24: 58000000 INFO @ Tue, 16 Jun 2020 10:10:25: 49000000 INFO @ Tue, 16 Jun 2020 10:10:31: 49000000 INFO @ Tue, 16 Jun 2020 10:10:32: 59000000 INFO @ Tue, 16 Jun 2020 10:10:33: 50000000 INFO @ Tue, 16 Jun 2020 10:10:39: 50000000 INFO @ Tue, 16 Jun 2020 10:10:40: 60000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 10:10:40: 51000000 INFO @ Tue, 16 Jun 2020 10:10:47: 61000000 INFO @ Tue, 16 Jun 2020 10:10:48: 51000000 INFO @ Tue, 16 Jun 2020 10:10:48: 52000000 INFO @ Tue, 16 Jun 2020 10:10:55: 62000000 INFO @ Tue, 16 Jun 2020 10:10:56: 53000000 INFO @ Tue, 16 Jun 2020 10:10:56: 52000000 INFO @ Tue, 16 Jun 2020 10:11:03: 63000000 INFO @ Tue, 16 Jun 2020 10:11:04: 54000000 INFO @ Tue, 16 Jun 2020 10:11:05: 53000000 INFO @ Tue, 16 Jun 2020 10:11:11: 64000000 INFO @ Tue, 16 Jun 2020 10:11:11: 55000000 INFO @ Tue, 16 Jun 2020 10:11:14: 54000000 INFO @ Tue, 16 Jun 2020 10:11:19: 65000000 INFO @ Tue, 16 Jun 2020 10:11:19: 56000000 INFO @ Tue, 16 Jun 2020 10:11:22: 55000000 INFO @ Tue, 16 Jun 2020 10:11:27: 57000000 INFO @ Tue, 16 Jun 2020 10:11:27: 66000000 INFO @ Tue, 16 Jun 2020 10:11:31: 56000000 INFO @ Tue, 16 Jun 2020 10:11:34: 58000000 INFO @ Tue, 16 Jun 2020 10:11:35: 67000000 INFO @ Tue, 16 Jun 2020 10:11:39: 57000000 INFO @ Tue, 16 Jun 2020 10:11:42: 59000000 INFO @ Tue, 16 Jun 2020 10:11:43: 68000000 INFO @ Tue, 16 Jun 2020 10:11:47: 58000000 INFO @ Tue, 16 Jun 2020 10:11:49: 60000000 INFO @ Tue, 16 Jun 2020 10:11:51: 69000000 INFO @ Tue, 16 Jun 2020 10:11:56: 59000000 INFO @ Tue, 16 Jun 2020 10:11:57: 61000000 INFO @ Tue, 16 Jun 2020 10:11:58: 70000000 INFO @ Tue, 16 Jun 2020 10:12:04: 60000000 INFO @ Tue, 16 Jun 2020 10:12:05: 62000000 INFO @ Tue, 16 Jun 2020 10:12:06: 71000000 INFO @ Tue, 16 Jun 2020 10:12:12: 61000000 INFO @ Tue, 16 Jun 2020 10:12:12: 63000000 INFO @ Tue, 16 Jun 2020 10:12:14: 72000000 INFO @ Tue, 16 Jun 2020 10:12:20: 62000000 INFO @ Tue, 16 Jun 2020 10:12:20: 64000000 INFO @ Tue, 16 Jun 2020 10:12:22: 73000000 INFO @ Tue, 16 Jun 2020 10:12:28: 63000000 INFO @ Tue, 16 Jun 2020 10:12:28: 65000000 INFO @ Tue, 16 Jun 2020 10:12:30: 74000000 INFO @ Tue, 16 Jun 2020 10:12:35: 66000000 INFO @ Tue, 16 Jun 2020 10:12:36: 64000000 INFO @ Tue, 16 Jun 2020 10:12:37: 75000000 INFO @ Tue, 16 Jun 2020 10:12:43: 67000000 INFO @ Tue, 16 Jun 2020 10:12:44: 65000000 INFO @ Tue, 16 Jun 2020 10:12:45: 76000000 INFO @ Tue, 16 Jun 2020 10:12:51: 68000000 INFO @ Tue, 16 Jun 2020 10:12:53: 66000000 INFO @ Tue, 16 Jun 2020 10:12:53: 77000000 INFO @ Tue, 16 Jun 2020 10:12:58: 69000000 INFO @ Tue, 16 Jun 2020 10:13:01: 78000000 INFO @ Tue, 16 Jun 2020 10:13:01: 67000000 INFO @ Tue, 16 Jun 2020 10:13:06: 70000000 INFO @ Tue, 16 Jun 2020 10:13:09: 79000000 INFO @ Tue, 16 Jun 2020 10:13:10: 68000000 INFO @ Tue, 16 Jun 2020 10:13:13: 71000000 INFO @ Tue, 16 Jun 2020 10:13:16: 80000000 INFO @ Tue, 16 Jun 2020 10:13:18: 69000000 INFO @ Tue, 16 Jun 2020 10:13:21: 72000000 INFO @ Tue, 16 Jun 2020 10:13:24: 81000000 INFO @ Tue, 16 Jun 2020 10:13:26: 70000000 INFO @ Tue, 16 Jun 2020 10:13:29: 73000000 INFO @ Tue, 16 Jun 2020 10:13:30: #1 tag size is determined as 51 bps INFO @ Tue, 16 Jun 2020 10:13:30: #1 tag size = 51 INFO @ Tue, 16 Jun 2020 10:13:30: #1 total tags in treatment: 39414051 INFO @ Tue, 16 Jun 2020 10:13:30: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:13:30: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:13:30: #1 tags after filtering in treatment: 30533773 INFO @ Tue, 16 Jun 2020 10:13:30: #1 Redundant rate of treatment: 0.23 INFO @ Tue, 16 Jun 2020 10:13:30: #1 finished! INFO @ Tue, 16 Jun 2020 10:13:30: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:13:30: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:13:33: #2 number of paired peaks: 50 WARNING @ Tue, 16 Jun 2020 10:13:33: Too few paired peaks (50) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:13:33: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:13:35: 71000000 INFO @ Tue, 16 Jun 2020 10:13:36: 74000000 INFO @ Tue, 16 Jun 2020 10:13:43: 72000000 INFO @ Tue, 16 Jun 2020 10:13:44: 75000000 INFO @ Tue, 16 Jun 2020 10:13:51: 73000000 INFO @ Tue, 16 Jun 2020 10:13:51: 76000000 INFO @ Tue, 16 Jun 2020 10:13:59: 77000000 INFO @ Tue, 16 Jun 2020 10:13:59: 74000000 INFO @ Tue, 16 Jun 2020 10:14:06: 75000000 INFO @ Tue, 16 Jun 2020 10:14:07: 78000000 INFO @ Tue, 16 Jun 2020 10:14:14: 76000000 INFO @ Tue, 16 Jun 2020 10:14:14: 79000000 INFO @ Tue, 16 Jun 2020 10:14:22: 77000000 INFO @ Tue, 16 Jun 2020 10:14:22: 80000000 INFO @ Tue, 16 Jun 2020 10:14:29: 81000000 INFO @ Tue, 16 Jun 2020 10:14:30: 78000000 INFO @ Tue, 16 Jun 2020 10:14:35: #1 tag size is determined as 51 bps INFO @ Tue, 16 Jun 2020 10:14:35: #1 tag size = 51 INFO @ Tue, 16 Jun 2020 10:14:35: #1 total tags in treatment: 39414051 INFO @ Tue, 16 Jun 2020 10:14:35: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:14:35: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:14:35: #1 tags after filtering in treatment: 30533773 INFO @ Tue, 16 Jun 2020 10:14:35: #1 Redundant rate of treatment: 0.23 INFO @ Tue, 16 Jun 2020 10:14:35: #1 finished! INFO @ Tue, 16 Jun 2020 10:14:35: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:14:35: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:14:37: #2 number of paired peaks: 50 WARNING @ Tue, 16 Jun 2020 10:14:37: Too few paired peaks (50) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:14:37: Process for pairing-model is terminated! INFO @ Tue, 16 Jun 2020 10:14:38: 79000000 cut: /home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:14:44: 80000000 INFO @ Tue, 16 Jun 2020 10:14:52: 81000000 INFO @ Tue, 16 Jun 2020 10:14:57: #1 tag size is determined as 51 bps INFO @ Tue, 16 Jun 2020 10:14:57: #1 tag size = 51 INFO @ Tue, 16 Jun 2020 10:14:57: #1 total tags in treatment: 39414051 INFO @ Tue, 16 Jun 2020 10:14:57: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:14:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:14:57: #1 tags after filtering in treatment: 30533773 INFO @ Tue, 16 Jun 2020 10:14:57: #1 Redundant rate of treatment: 0.23 INFO @ Tue, 16 Jun 2020 10:14:57: #1 finished! INFO @ Tue, 16 Jun 2020 10:14:57: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:14:57: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:15:00: #2 number of paired peaks: 50 WARNING @ Tue, 16 Jun 2020 10:15:00: Too few paired peaks (50) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:15:00: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4085408/SRX4085408.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling