Job ID = 6367711 SRX = SRX4012475 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T23:33:05 prefetch.2.10.7: 1) Downloading 'SRR7082716'... 2020-06-15T23:33:05 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:50:31 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:50:31 prefetch.2.10.7: 1) 'SRR7082716' was downloaded successfully Read 40198550 spots for SRR7082716/SRR7082716.sra Written 40198550 spots for SRR7082716/SRR7082716.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:46:12 40198550 reads; of these: 40198550 (100.00%) were paired; of these: 1176597 (2.93%) aligned concordantly 0 times 34000563 (84.58%) aligned concordantly exactly 1 time 5021390 (12.49%) aligned concordantly >1 times ---- 1176597 pairs aligned concordantly 0 times; of these: 422471 (35.91%) aligned discordantly 1 time ---- 754126 pairs aligned 0 times concordantly or discordantly; of these: 1508252 mates make up the pairs; of these: 658553 (43.66%) aligned 0 times 514372 (34.10%) aligned exactly 1 time 335327 (22.23%) aligned >1 times 99.18% overall alignment rate Time searching: 00:46:12 Overall time: 00:46:12 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 1515325 / 39111773 = 0.0387 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:08:17: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:08:17: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:08:17: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:08:23: 1000000 INFO @ Tue, 16 Jun 2020 10:08:29: 2000000 INFO @ Tue, 16 Jun 2020 10:08:35: 3000000 INFO @ Tue, 16 Jun 2020 10:08:41: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:08:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:08:47: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:08:47: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:08:47: 5000000 INFO @ Tue, 16 Jun 2020 10:08:53: 1000000 INFO @ Tue, 16 Jun 2020 10:08:53: 6000000 INFO @ Tue, 16 Jun 2020 10:08:59: 2000000 INFO @ Tue, 16 Jun 2020 10:08:59: 7000000 INFO @ Tue, 16 Jun 2020 10:09:05: 3000000 INFO @ Tue, 16 Jun 2020 10:09:06: 8000000 INFO @ Tue, 16 Jun 2020 10:09:12: 4000000 INFO @ Tue, 16 Jun 2020 10:09:12: 9000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 10:09:17: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 10:09:17: #1 read tag files... INFO @ Tue, 16 Jun 2020 10:09:17: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 10:09:18: 5000000 INFO @ Tue, 16 Jun 2020 10:09:18: 10000000 INFO @ Tue, 16 Jun 2020 10:09:23: 1000000 INFO @ Tue, 16 Jun 2020 10:09:24: 6000000 INFO @ Tue, 16 Jun 2020 10:09:25: 11000000 INFO @ Tue, 16 Jun 2020 10:09:30: 2000000 INFO @ Tue, 16 Jun 2020 10:09:30: 7000000 INFO @ Tue, 16 Jun 2020 10:09:31: 12000000 INFO @ Tue, 16 Jun 2020 10:09:36: 3000000 INFO @ Tue, 16 Jun 2020 10:09:36: 8000000 INFO @ Tue, 16 Jun 2020 10:09:38: 13000000 INFO @ Tue, 16 Jun 2020 10:09:42: 4000000 INFO @ Tue, 16 Jun 2020 10:09:43: 9000000 INFO @ Tue, 16 Jun 2020 10:09:44: 14000000 INFO @ Tue, 16 Jun 2020 10:09:49: 5000000 INFO @ Tue, 16 Jun 2020 10:09:49: 10000000 INFO @ Tue, 16 Jun 2020 10:09:50: 15000000 INFO @ Tue, 16 Jun 2020 10:09:55: 6000000 INFO @ Tue, 16 Jun 2020 10:09:55: 11000000 INFO @ Tue, 16 Jun 2020 10:09:57: 16000000 INFO @ Tue, 16 Jun 2020 10:10:01: 7000000 INFO @ Tue, 16 Jun 2020 10:10:01: 12000000 INFO @ Tue, 16 Jun 2020 10:10:03: 17000000 INFO @ Tue, 16 Jun 2020 10:10:08: 8000000 INFO @ Tue, 16 Jun 2020 10:10:08: 13000000 INFO @ Tue, 16 Jun 2020 10:10:10: 18000000 INFO @ Tue, 16 Jun 2020 10:10:14: 14000000 INFO @ Tue, 16 Jun 2020 10:10:14: 9000000 INFO @ Tue, 16 Jun 2020 10:10:16: 19000000 INFO @ Tue, 16 Jun 2020 10:10:20: 15000000 INFO @ Tue, 16 Jun 2020 10:10:20: 10000000 INFO @ Tue, 16 Jun 2020 10:10:22: 20000000 INFO @ Tue, 16 Jun 2020 10:10:27: 16000000 INFO @ Tue, 16 Jun 2020 10:10:27: 11000000 INFO @ Tue, 16 Jun 2020 10:10:29: 21000000 INFO @ Tue, 16 Jun 2020 10:10:33: 17000000 INFO @ Tue, 16 Jun 2020 10:10:33: 12000000 INFO @ Tue, 16 Jun 2020 10:10:35: 22000000 INFO @ Tue, 16 Jun 2020 10:10:39: 18000000 INFO @ Tue, 16 Jun 2020 10:10:40: 13000000 INFO @ Tue, 16 Jun 2020 10:10:42: 23000000 INFO @ Tue, 16 Jun 2020 10:10:45: 19000000 INFO @ Tue, 16 Jun 2020 10:10:46: 14000000 INFO @ Tue, 16 Jun 2020 10:10:48: 24000000 INFO @ Tue, 16 Jun 2020 10:10:52: 20000000 INFO @ Tue, 16 Jun 2020 10:10:52: 15000000 INFO @ Tue, 16 Jun 2020 10:10:55: 25000000 INFO @ Tue, 16 Jun 2020 10:10:58: 21000000 INFO @ Tue, 16 Jun 2020 10:10:59: 16000000 INFO @ Tue, 16 Jun 2020 10:11:01: 26000000 INFO @ Tue, 16 Jun 2020 10:11:04: 22000000 INFO @ Tue, 16 Jun 2020 10:11:05: 17000000 INFO @ Tue, 16 Jun 2020 10:11:07: 27000000 INFO @ Tue, 16 Jun 2020 10:11:11: 23000000 INFO @ Tue, 16 Jun 2020 10:11:11: 18000000 INFO @ Tue, 16 Jun 2020 10:11:14: 28000000 INFO @ Tue, 16 Jun 2020 10:11:17: 24000000 INFO @ Tue, 16 Jun 2020 10:11:18: 19000000 INFO @ Tue, 16 Jun 2020 10:11:20: 29000000 INFO @ Tue, 16 Jun 2020 10:11:23: 25000000 INFO @ Tue, 16 Jun 2020 10:11:24: 20000000 INFO @ Tue, 16 Jun 2020 10:11:26: 30000000 INFO @ Tue, 16 Jun 2020 10:11:29: 26000000 INFO @ Tue, 16 Jun 2020 10:11:31: 21000000 INFO @ Tue, 16 Jun 2020 10:11:33: 31000000 INFO @ Tue, 16 Jun 2020 10:11:36: 27000000 INFO @ Tue, 16 Jun 2020 10:11:37: 22000000 INFO @ Tue, 16 Jun 2020 10:11:39: 32000000 INFO @ Tue, 16 Jun 2020 10:11:42: 28000000 INFO @ Tue, 16 Jun 2020 10:11:43: 23000000 INFO @ Tue, 16 Jun 2020 10:11:45: 33000000 INFO @ Tue, 16 Jun 2020 10:11:48: 29000000 INFO @ Tue, 16 Jun 2020 10:11:50: 24000000 INFO @ Tue, 16 Jun 2020 10:11:52: 34000000 INFO @ Tue, 16 Jun 2020 10:11:54: 30000000 INFO @ Tue, 16 Jun 2020 10:11:56: 25000000 INFO @ Tue, 16 Jun 2020 10:11:58: 35000000 INFO @ Tue, 16 Jun 2020 10:12:01: 31000000 INFO @ Tue, 16 Jun 2020 10:12:03: 26000000 INFO @ Tue, 16 Jun 2020 10:12:05: 36000000 INFO @ Tue, 16 Jun 2020 10:12:08: 32000000 INFO @ Tue, 16 Jun 2020 10:12:09: 27000000 INFO @ Tue, 16 Jun 2020 10:12:11: 37000000 INFO @ Tue, 16 Jun 2020 10:12:14: 33000000 INFO @ Tue, 16 Jun 2020 10:12:15: 28000000 INFO @ Tue, 16 Jun 2020 10:12:17: 38000000 INFO @ Tue, 16 Jun 2020 10:12:20: 34000000 INFO @ Tue, 16 Jun 2020 10:12:22: 29000000 INFO @ Tue, 16 Jun 2020 10:12:24: 39000000 INFO @ Tue, 16 Jun 2020 10:12:27: 35000000 INFO @ Tue, 16 Jun 2020 10:12:28: 30000000 INFO @ Tue, 16 Jun 2020 10:12:30: 40000000 INFO @ Tue, 16 Jun 2020 10:12:33: 36000000 INFO @ Tue, 16 Jun 2020 10:12:35: 31000000 INFO @ Tue, 16 Jun 2020 10:12:36: 41000000 INFO @ Tue, 16 Jun 2020 10:12:39: 37000000 INFO @ Tue, 16 Jun 2020 10:12:41: 32000000 INFO @ Tue, 16 Jun 2020 10:12:43: 42000000 INFO @ Tue, 16 Jun 2020 10:12:45: 38000000 INFO @ Tue, 16 Jun 2020 10:12:47: 33000000 INFO @ Tue, 16 Jun 2020 10:12:49: 43000000 INFO @ Tue, 16 Jun 2020 10:12:51: 39000000 INFO @ Tue, 16 Jun 2020 10:12:54: 34000000 INFO @ Tue, 16 Jun 2020 10:12:55: 44000000 INFO @ Tue, 16 Jun 2020 10:12:57: 40000000 INFO @ Tue, 16 Jun 2020 10:13:00: 35000000 INFO @ Tue, 16 Jun 2020 10:13:02: 45000000 INFO @ Tue, 16 Jun 2020 10:13:03: 41000000 INFO @ Tue, 16 Jun 2020 10:13:06: 36000000 INFO @ Tue, 16 Jun 2020 10:13:08: 46000000 INFO @ Tue, 16 Jun 2020 10:13:09: 42000000 INFO @ Tue, 16 Jun 2020 10:13:13: 37000000 INFO @ Tue, 16 Jun 2020 10:13:14: 47000000 INFO @ Tue, 16 Jun 2020 10:13:15: 43000000 INFO @ Tue, 16 Jun 2020 10:13:19: 38000000 INFO @ Tue, 16 Jun 2020 10:13:21: 48000000 INFO @ Tue, 16 Jun 2020 10:13:22: 44000000 INFO @ Tue, 16 Jun 2020 10:13:25: 39000000 INFO @ Tue, 16 Jun 2020 10:13:27: 49000000 INFO @ Tue, 16 Jun 2020 10:13:28: 45000000 INFO @ Tue, 16 Jun 2020 10:13:32: 40000000 INFO @ Tue, 16 Jun 2020 10:13:34: 50000000 INFO @ Tue, 16 Jun 2020 10:13:34: 46000000 INFO @ Tue, 16 Jun 2020 10:13:38: 41000000 INFO @ Tue, 16 Jun 2020 10:13:40: 51000000 INFO @ Tue, 16 Jun 2020 10:13:41: 47000000 INFO @ Tue, 16 Jun 2020 10:13:44: 42000000 INFO @ Tue, 16 Jun 2020 10:13:46: 52000000 INFO @ Tue, 16 Jun 2020 10:13:47: 48000000 INFO @ Tue, 16 Jun 2020 10:13:51: 43000000 INFO @ Tue, 16 Jun 2020 10:13:53: 53000000 INFO @ Tue, 16 Jun 2020 10:13:53: 49000000 INFO @ Tue, 16 Jun 2020 10:13:57: 44000000 INFO @ Tue, 16 Jun 2020 10:13:59: 50000000 INFO @ Tue, 16 Jun 2020 10:13:59: 54000000 INFO @ Tue, 16 Jun 2020 10:14:03: 45000000 INFO @ Tue, 16 Jun 2020 10:14:05: 51000000 INFO @ Tue, 16 Jun 2020 10:14:06: 55000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 10:14:10: 46000000 INFO @ Tue, 16 Jun 2020 10:14:11: 52000000 INFO @ Tue, 16 Jun 2020 10:14:12: 56000000 INFO @ Tue, 16 Jun 2020 10:14:16: 47000000 INFO @ Tue, 16 Jun 2020 10:14:18: 53000000 INFO @ Tue, 16 Jun 2020 10:14:19: 57000000 INFO @ Tue, 16 Jun 2020 10:14:22: 48000000 INFO @ Tue, 16 Jun 2020 10:14:24: 54000000 INFO @ Tue, 16 Jun 2020 10:14:25: 58000000 INFO @ Tue, 16 Jun 2020 10:14:28: 49000000 INFO @ Tue, 16 Jun 2020 10:14:30: 55000000 INFO @ Tue, 16 Jun 2020 10:14:31: 59000000 INFO @ Tue, 16 Jun 2020 10:14:35: 50000000 INFO @ Tue, 16 Jun 2020 10:14:36: 56000000 INFO @ Tue, 16 Jun 2020 10:14:38: 60000000 INFO @ Tue, 16 Jun 2020 10:14:41: 51000000 INFO @ Tue, 16 Jun 2020 10:14:42: 57000000 INFO @ Tue, 16 Jun 2020 10:14:44: 61000000 INFO @ Tue, 16 Jun 2020 10:14:47: 52000000 INFO @ Tue, 16 Jun 2020 10:14:48: 58000000 INFO @ Tue, 16 Jun 2020 10:14:51: 62000000 INFO @ Tue, 16 Jun 2020 10:14:54: 53000000 INFO @ Tue, 16 Jun 2020 10:14:54: 59000000 INFO @ Tue, 16 Jun 2020 10:14:57: 63000000 INFO @ Tue, 16 Jun 2020 10:15:00: 60000000 INFO @ Tue, 16 Jun 2020 10:15:00: 54000000 INFO @ Tue, 16 Jun 2020 10:15:03: 64000000 INFO @ Tue, 16 Jun 2020 10:15:06: 61000000 INFO @ Tue, 16 Jun 2020 10:15:07: 55000000 INFO @ Tue, 16 Jun 2020 10:15:10: 65000000 INFO @ Tue, 16 Jun 2020 10:15:12: 62000000 INFO @ Tue, 16 Jun 2020 10:15:13: 56000000 INFO @ Tue, 16 Jun 2020 10:15:16: 66000000 INFO @ Tue, 16 Jun 2020 10:15:18: 63000000 INFO @ Tue, 16 Jun 2020 10:15:19: 57000000 INFO @ Tue, 16 Jun 2020 10:15:22: 67000000 INFO @ Tue, 16 Jun 2020 10:15:24: 64000000 INFO @ Tue, 16 Jun 2020 10:15:26: 58000000 INFO @ Tue, 16 Jun 2020 10:15:28: 68000000 INFO @ Tue, 16 Jun 2020 10:15:30: 65000000 INFO @ Tue, 16 Jun 2020 10:15:32: 59000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 10:15:34: 69000000 INFO @ Tue, 16 Jun 2020 10:15:36: 66000000 INFO @ Tue, 16 Jun 2020 10:15:39: 60000000 INFO @ Tue, 16 Jun 2020 10:15:40: 70000000 INFO @ Tue, 16 Jun 2020 10:15:43: 67000000 INFO @ Tue, 16 Jun 2020 10:15:45: 61000000 INFO @ Tue, 16 Jun 2020 10:15:47: 71000000 INFO @ Tue, 16 Jun 2020 10:15:49: 68000000 INFO @ Tue, 16 Jun 2020 10:15:51: 62000000 INFO @ Tue, 16 Jun 2020 10:15:53: 72000000 INFO @ Tue, 16 Jun 2020 10:15:54: 69000000 INFO @ Tue, 16 Jun 2020 10:15:57: 63000000 INFO @ Tue, 16 Jun 2020 10:15:59: 73000000 INFO @ Tue, 16 Jun 2020 10:16:00: 70000000 INFO @ Tue, 16 Jun 2020 10:16:04: 64000000 INFO @ Tue, 16 Jun 2020 10:16:06: 74000000 INFO @ Tue, 16 Jun 2020 10:16:06: 71000000 INFO @ Tue, 16 Jun 2020 10:16:10: 65000000 INFO @ Tue, 16 Jun 2020 10:16:12: 75000000 INFO @ Tue, 16 Jun 2020 10:16:12: 72000000 INFO @ Tue, 16 Jun 2020 10:16:16: 66000000 INFO @ Tue, 16 Jun 2020 10:16:18: 73000000 INFO @ Tue, 16 Jun 2020 10:16:19: 76000000 INFO @ Tue, 16 Jun 2020 10:16:23: 67000000 INFO @ Tue, 16 Jun 2020 10:16:23: #1 tag size is determined as 75 bps INFO @ Tue, 16 Jun 2020 10:16:23: #1 tag size = 75 INFO @ Tue, 16 Jun 2020 10:16:23: #1 total tags in treatment: 37509833 INFO @ Tue, 16 Jun 2020 10:16:23: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:16:23: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:16:24: #1 tags after filtering in treatment: 32379709 INFO @ Tue, 16 Jun 2020 10:16:24: #1 Redundant rate of treatment: 0.14 INFO @ Tue, 16 Jun 2020 10:16:24: #1 finished! INFO @ Tue, 16 Jun 2020 10:16:24: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:16:24: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:16:24: 74000000 INFO @ Tue, 16 Jun 2020 10:16:26: #2 number of paired peaks: 51 WARNING @ Tue, 16 Jun 2020 10:16:26: Too few paired peaks (51) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:16:26: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:16:29: 68000000 INFO @ Tue, 16 Jun 2020 10:16:31: 75000000 INFO @ Tue, 16 Jun 2020 10:16:35: 69000000 INFO @ Tue, 16 Jun 2020 10:16:37: 76000000 INFO @ Tue, 16 Jun 2020 10:16:41: #1 tag size is determined as 75 bps INFO @ Tue, 16 Jun 2020 10:16:41: #1 tag size = 75 INFO @ Tue, 16 Jun 2020 10:16:41: #1 total tags in treatment: 37509833 INFO @ Tue, 16 Jun 2020 10:16:41: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:16:41: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:16:41: 70000000 INFO @ Tue, 16 Jun 2020 10:16:42: #1 tags after filtering in treatment: 32379709 INFO @ Tue, 16 Jun 2020 10:16:42: #1 Redundant rate of treatment: 0.14 INFO @ Tue, 16 Jun 2020 10:16:42: #1 finished! INFO @ Tue, 16 Jun 2020 10:16:42: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:16:42: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:16:44: #2 number of paired peaks: 51 WARNING @ Tue, 16 Jun 2020 10:16:44: Too few paired peaks (51) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:16:44: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:16:47: 71000000 INFO @ Tue, 16 Jun 2020 10:16:53: 72000000 INFO @ Tue, 16 Jun 2020 10:17:00: 73000000 INFO @ Tue, 16 Jun 2020 10:17:06: 74000000 INFO @ Tue, 16 Jun 2020 10:17:12: 75000000 INFO @ Tue, 16 Jun 2020 10:17:18: 76000000 INFO @ Tue, 16 Jun 2020 10:17:23: #1 tag size is determined as 75 bps INFO @ Tue, 16 Jun 2020 10:17:23: #1 tag size = 75 INFO @ Tue, 16 Jun 2020 10:17:23: #1 total tags in treatment: 37509833 INFO @ Tue, 16 Jun 2020 10:17:23: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:17:23: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:17:23: #1 tags after filtering in treatment: 32379709 INFO @ Tue, 16 Jun 2020 10:17:23: #1 Redundant rate of treatment: 0.14 INFO @ Tue, 16 Jun 2020 10:17:23: #1 finished! INFO @ Tue, 16 Jun 2020 10:17:23: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:17:23: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:17:25: #2 number of paired peaks: 51 WARNING @ Tue, 16 Jun 2020 10:17:25: Too few paired peaks (51) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 10:17:25: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX4012475/SRX4012475.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling