Job ID = 6367657 SRX = SRX3733151 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T23:31:35 prefetch.2.10.7: 1) Downloading 'SRR6760664'... 2020-06-15T23:31:35 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:42:21 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:42:21 prefetch.2.10.7: 1) 'SRR6760664' was downloaded successfully 2020-06-15T23:42:21 prefetch.2.10.7: 'SRR6760664' has 0 unresolved dependencies Read 43231688 spots for SRR6760664/SRR6760664.sra Written 43231688 spots for SRR6760664/SRR6760664.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:49:37 43231688 reads; of these: 43231688 (100.00%) were paired; of these: 2205255 (5.10%) aligned concordantly 0 times 37961932 (87.81%) aligned concordantly exactly 1 time 3064501 (7.09%) aligned concordantly >1 times ---- 2205255 pairs aligned concordantly 0 times; of these: 499324 (22.64%) aligned discordantly 1 time ---- 1705931 pairs aligned 0 times concordantly or discordantly; of these: 3411862 mates make up the pairs; of these: 2615874 (76.67%) aligned 0 times 575201 (16.86%) aligned exactly 1 time 220787 (6.47%) aligned >1 times 96.97% overall alignment rate Time searching: 00:49:37 Overall time: 00:49:37 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 18806975 / 41471784 = 0.4535 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:57:57: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:57:57: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:57:57: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:58:03: 1000000 INFO @ Tue, 16 Jun 2020 09:58:09: 2000000 INFO @ Tue, 16 Jun 2020 09:58:15: 3000000 INFO @ Tue, 16 Jun 2020 09:58:21: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:58:26: 5000000 INFO @ Tue, 16 Jun 2020 09:58:27: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:58:27: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:58:27: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:58:32: 6000000 INFO @ Tue, 16 Jun 2020 09:58:34: 1000000 INFO @ Tue, 16 Jun 2020 09:58:38: 7000000 INFO @ Tue, 16 Jun 2020 09:58:40: 2000000 INFO @ Tue, 16 Jun 2020 09:58:45: 8000000 INFO @ Tue, 16 Jun 2020 09:58:46: 3000000 INFO @ Tue, 16 Jun 2020 09:58:51: 9000000 INFO @ Tue, 16 Jun 2020 09:58:52: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:58:57: 10000000 INFO @ Tue, 16 Jun 2020 09:58:58: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:58:58: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:58:58: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:58:59: 5000000 INFO @ Tue, 16 Jun 2020 09:59:03: 11000000 INFO @ Tue, 16 Jun 2020 09:59:04: 1000000 INFO @ Tue, 16 Jun 2020 09:59:05: 6000000 INFO @ Tue, 16 Jun 2020 09:59:10: 12000000 INFO @ Tue, 16 Jun 2020 09:59:10: 2000000 INFO @ Tue, 16 Jun 2020 09:59:11: 7000000 INFO @ Tue, 16 Jun 2020 09:59:16: 13000000 INFO @ Tue, 16 Jun 2020 09:59:17: 3000000 INFO @ Tue, 16 Jun 2020 09:59:18: 8000000 INFO @ Tue, 16 Jun 2020 09:59:22: 14000000 INFO @ Tue, 16 Jun 2020 09:59:23: 4000000 INFO @ Tue, 16 Jun 2020 09:59:24: 9000000 INFO @ Tue, 16 Jun 2020 09:59:29: 15000000 INFO @ Tue, 16 Jun 2020 09:59:29: 5000000 INFO @ Tue, 16 Jun 2020 09:59:30: 10000000 INFO @ Tue, 16 Jun 2020 09:59:35: 16000000 INFO @ Tue, 16 Jun 2020 09:59:36: 6000000 INFO @ Tue, 16 Jun 2020 09:59:37: 11000000 INFO @ Tue, 16 Jun 2020 09:59:41: 17000000 INFO @ Tue, 16 Jun 2020 09:59:42: 7000000 INFO @ Tue, 16 Jun 2020 09:59:43: 12000000 INFO @ Tue, 16 Jun 2020 09:59:48: 18000000 INFO @ Tue, 16 Jun 2020 09:59:48: 8000000 INFO @ Tue, 16 Jun 2020 09:59:49: 13000000 INFO @ Tue, 16 Jun 2020 09:59:54: 19000000 INFO @ Tue, 16 Jun 2020 09:59:55: 9000000 INFO @ Tue, 16 Jun 2020 09:59:56: 14000000 INFO @ Tue, 16 Jun 2020 10:00:01: 20000000 INFO @ Tue, 16 Jun 2020 10:00:01: 10000000 INFO @ Tue, 16 Jun 2020 10:00:02: 15000000 INFO @ Tue, 16 Jun 2020 10:00:07: 21000000 INFO @ Tue, 16 Jun 2020 10:00:08: 11000000 INFO @ Tue, 16 Jun 2020 10:00:09: 16000000 INFO @ Tue, 16 Jun 2020 10:00:13: 22000000 INFO @ Tue, 16 Jun 2020 10:00:14: 12000000 INFO @ Tue, 16 Jun 2020 10:00:15: 17000000 INFO @ Tue, 16 Jun 2020 10:00:20: 23000000 INFO @ Tue, 16 Jun 2020 10:00:20: 13000000 INFO @ Tue, 16 Jun 2020 10:00:22: 18000000 INFO @ Tue, 16 Jun 2020 10:00:26: 24000000 INFO @ Tue, 16 Jun 2020 10:00:27: 14000000 INFO @ Tue, 16 Jun 2020 10:00:29: 19000000 INFO @ Tue, 16 Jun 2020 10:00:33: 25000000 INFO @ Tue, 16 Jun 2020 10:00:33: 15000000 INFO @ Tue, 16 Jun 2020 10:00:35: 20000000 INFO @ Tue, 16 Jun 2020 10:00:39: 26000000 INFO @ Tue, 16 Jun 2020 10:00:40: 16000000 INFO @ Tue, 16 Jun 2020 10:00:42: 21000000 INFO @ Tue, 16 Jun 2020 10:00:46: 27000000 INFO @ Tue, 16 Jun 2020 10:00:46: 17000000 INFO @ Tue, 16 Jun 2020 10:00:48: 22000000 INFO @ Tue, 16 Jun 2020 10:00:53: 28000000 INFO @ Tue, 16 Jun 2020 10:00:53: 18000000 INFO @ Tue, 16 Jun 2020 10:00:55: 23000000 INFO @ Tue, 16 Jun 2020 10:01:00: 29000000 INFO @ Tue, 16 Jun 2020 10:01:00: 19000000 INFO @ Tue, 16 Jun 2020 10:01:02: 24000000 INFO @ Tue, 16 Jun 2020 10:01:06: 20000000 INFO @ Tue, 16 Jun 2020 10:01:06: 30000000 INFO @ Tue, 16 Jun 2020 10:01:09: 25000000 INFO @ Tue, 16 Jun 2020 10:01:13: 21000000 INFO @ Tue, 16 Jun 2020 10:01:13: 31000000 INFO @ Tue, 16 Jun 2020 10:01:15: 26000000 INFO @ Tue, 16 Jun 2020 10:01:19: 22000000 INFO @ Tue, 16 Jun 2020 10:01:20: 32000000 INFO @ Tue, 16 Jun 2020 10:01:22: 27000000 INFO @ Tue, 16 Jun 2020 10:01:26: 23000000 INFO @ Tue, 16 Jun 2020 10:01:27: 33000000 INFO @ Tue, 16 Jun 2020 10:01:29: 28000000 INFO @ Tue, 16 Jun 2020 10:01:33: 24000000 INFO @ Tue, 16 Jun 2020 10:01:34: 34000000 INFO @ Tue, 16 Jun 2020 10:01:35: 29000000 INFO @ Tue, 16 Jun 2020 10:01:39: 25000000 INFO @ Tue, 16 Jun 2020 10:01:41: 35000000 INFO @ Tue, 16 Jun 2020 10:01:42: 30000000 INFO @ Tue, 16 Jun 2020 10:01:46: 26000000 INFO @ Tue, 16 Jun 2020 10:01:48: 36000000 INFO @ Tue, 16 Jun 2020 10:01:49: 31000000 INFO @ Tue, 16 Jun 2020 10:01:53: 27000000 INFO @ Tue, 16 Jun 2020 10:01:55: 37000000 INFO @ Tue, 16 Jun 2020 10:01:56: 32000000 INFO @ Tue, 16 Jun 2020 10:02:00: 28000000 INFO @ Tue, 16 Jun 2020 10:02:02: 38000000 INFO @ Tue, 16 Jun 2020 10:02:02: 33000000 INFO @ Tue, 16 Jun 2020 10:02:06: 29000000 INFO @ Tue, 16 Jun 2020 10:02:08: 39000000 INFO @ Tue, 16 Jun 2020 10:02:09: 34000000 INFO @ Tue, 16 Jun 2020 10:02:13: 30000000 INFO @ Tue, 16 Jun 2020 10:02:15: 40000000 INFO @ Tue, 16 Jun 2020 10:02:16: 35000000 INFO @ Tue, 16 Jun 2020 10:02:20: 31000000 INFO @ Tue, 16 Jun 2020 10:02:22: 41000000 INFO @ Tue, 16 Jun 2020 10:02:23: 36000000 INFO @ Tue, 16 Jun 2020 10:02:26: 32000000 INFO @ Tue, 16 Jun 2020 10:02:29: 42000000 INFO @ Tue, 16 Jun 2020 10:02:30: 37000000 INFO @ Tue, 16 Jun 2020 10:02:33: 33000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 10:02:36: 43000000 INFO @ Tue, 16 Jun 2020 10:02:36: 38000000 INFO @ Tue, 16 Jun 2020 10:02:40: 34000000 INFO @ Tue, 16 Jun 2020 10:02:43: 44000000 INFO @ Tue, 16 Jun 2020 10:02:43: 39000000 INFO @ Tue, 16 Jun 2020 10:02:47: 35000000 INFO @ Tue, 16 Jun 2020 10:02:50: 40000000 INFO @ Tue, 16 Jun 2020 10:02:50: 45000000 INFO @ Tue, 16 Jun 2020 10:02:53: 36000000 INFO @ Tue, 16 Jun 2020 10:02:57: 41000000 INFO @ Tue, 16 Jun 2020 10:02:57: 46000000 INFO @ Tue, 16 Jun 2020 10:02:59: #1 tag size is determined as 76 bps INFO @ Tue, 16 Jun 2020 10:02:59: #1 tag size = 76 INFO @ Tue, 16 Jun 2020 10:02:59: #1 total tags in treatment: 22298895 INFO @ Tue, 16 Jun 2020 10:02:59: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:02:59: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:02:59: #1 tags after filtering in treatment: 18531784 INFO @ Tue, 16 Jun 2020 10:02:59: #1 Redundant rate of treatment: 0.17 INFO @ Tue, 16 Jun 2020 10:02:59: #1 finished! INFO @ Tue, 16 Jun 2020 10:02:59: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:02:59: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:03:00: 37000000 INFO @ Tue, 16 Jun 2020 10:03:00: #2 number of paired peaks: 211 WARNING @ Tue, 16 Jun 2020 10:03:00: Fewer paired peaks (211) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 211 pairs to build model! INFO @ Tue, 16 Jun 2020 10:03:00: start model_add_line... INFO @ Tue, 16 Jun 2020 10:03:00: start X-correlation... INFO @ Tue, 16 Jun 2020 10:03:00: end of X-cor INFO @ Tue, 16 Jun 2020 10:03:00: #2 finished! INFO @ Tue, 16 Jun 2020 10:03:00: #2 predicted fragment length is 165 bps INFO @ Tue, 16 Jun 2020 10:03:00: #2 alternative fragment length(s) may be 4,138,140,142,144,165 bps INFO @ Tue, 16 Jun 2020 10:03:00: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.05_model.r INFO @ Tue, 16 Jun 2020 10:03:00: #3 Call peaks... INFO @ Tue, 16 Jun 2020 10:03:00: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 10:03:03: 42000000 INFO @ Tue, 16 Jun 2020 10:03:07: 38000000 INFO @ Tue, 16 Jun 2020 10:03:10: 43000000 INFO @ Tue, 16 Jun 2020 10:03:13: 39000000 INFO @ Tue, 16 Jun 2020 10:03:17: 44000000 INFO @ Tue, 16 Jun 2020 10:03:20: 40000000 INFO @ Tue, 16 Jun 2020 10:03:23: 45000000 INFO @ Tue, 16 Jun 2020 10:03:27: 41000000 INFO @ Tue, 16 Jun 2020 10:03:30: 46000000 INFO @ Tue, 16 Jun 2020 10:03:32: #1 tag size is determined as 76 bps INFO @ Tue, 16 Jun 2020 10:03:32: #1 tag size = 76 INFO @ Tue, 16 Jun 2020 10:03:32: #1 total tags in treatment: 22298895 INFO @ Tue, 16 Jun 2020 10:03:32: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:03:32: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:03:32: #1 tags after filtering in treatment: 18531784 INFO @ Tue, 16 Jun 2020 10:03:32: #1 Redundant rate of treatment: 0.17 INFO @ Tue, 16 Jun 2020 10:03:32: #1 finished! INFO @ Tue, 16 Jun 2020 10:03:32: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:03:32: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:03:33: 42000000 INFO @ Tue, 16 Jun 2020 10:03:34: #2 number of paired peaks: 211 WARNING @ Tue, 16 Jun 2020 10:03:34: Fewer paired peaks (211) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 211 pairs to build model! INFO @ Tue, 16 Jun 2020 10:03:34: start model_add_line... INFO @ Tue, 16 Jun 2020 10:03:34: start X-correlation... INFO @ Tue, 16 Jun 2020 10:03:34: end of X-cor INFO @ Tue, 16 Jun 2020 10:03:34: #2 finished! INFO @ Tue, 16 Jun 2020 10:03:34: #2 predicted fragment length is 165 bps INFO @ Tue, 16 Jun 2020 10:03:34: #2 alternative fragment length(s) may be 4,138,140,142,144,165 bps INFO @ Tue, 16 Jun 2020 10:03:34: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.10_model.r INFO @ Tue, 16 Jun 2020 10:03:34: #3 Call peaks... INFO @ Tue, 16 Jun 2020 10:03:34: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 10:03:40: 43000000 INFO @ Tue, 16 Jun 2020 10:03:42: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 10:03:46: 44000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 10:03:52: 45000000 INFO @ Tue, 16 Jun 2020 10:03:59: 46000000 INFO @ Tue, 16 Jun 2020 10:04:01: #1 tag size is determined as 76 bps INFO @ Tue, 16 Jun 2020 10:04:01: #1 tag size = 76 INFO @ Tue, 16 Jun 2020 10:04:01: #1 total tags in treatment: 22298895 INFO @ Tue, 16 Jun 2020 10:04:01: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 10:04:01: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 10:04:01: #1 tags after filtering in treatment: 18531784 INFO @ Tue, 16 Jun 2020 10:04:01: #1 Redundant rate of treatment: 0.17 INFO @ Tue, 16 Jun 2020 10:04:01: #1 finished! INFO @ Tue, 16 Jun 2020 10:04:01: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 10:04:01: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 10:04:02: #2 number of paired peaks: 211 WARNING @ Tue, 16 Jun 2020 10:04:02: Fewer paired peaks (211) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 211 pairs to build model! INFO @ Tue, 16 Jun 2020 10:04:02: start model_add_line... INFO @ Tue, 16 Jun 2020 10:04:03: start X-correlation... INFO @ Tue, 16 Jun 2020 10:04:03: end of X-cor INFO @ Tue, 16 Jun 2020 10:04:03: #2 finished! INFO @ Tue, 16 Jun 2020 10:04:03: #2 predicted fragment length is 165 bps INFO @ Tue, 16 Jun 2020 10:04:03: #2 alternative fragment length(s) may be 4,138,140,142,144,165 bps INFO @ Tue, 16 Jun 2020 10:04:03: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.20_model.r INFO @ Tue, 16 Jun 2020 10:04:03: #3 Call peaks... INFO @ Tue, 16 Jun 2020 10:04:03: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 16 Jun 2020 10:04:03: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.05_peaks.xls INFO @ Tue, 16 Jun 2020 10:04:03: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.05_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 10:04:03: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.05_summits.bed INFO @ Tue, 16 Jun 2020 10:04:03: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (4158 records, 4 fields): 5 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:04:15: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 10:04:37: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.10_peaks.xls INFO @ Tue, 16 Jun 2020 10:04:37: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.10_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 10:04:37: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.10_summits.bed INFO @ Tue, 16 Jun 2020 10:04:37: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (2189 records, 4 fields): 5 millis CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 10:04:42: #3 Call peaks for each chromosome... INFO @ Tue, 16 Jun 2020 10:05:02: #4 Write output xls file... /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.20_peaks.xls INFO @ Tue, 16 Jun 2020 10:05:02: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.20_peaks.narrowPeak INFO @ Tue, 16 Jun 2020 10:05:02: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce11/SRX3733151/SRX3733151.20_summits.bed INFO @ Tue, 16 Jun 2020 10:05:02: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (872 records, 4 fields): 3 millis CompletedMACS2peakCalling