Job ID = 6367158 SRX = SRX2958249 Genome = ce11 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-06-15T23:21:31 prefetch.2.10.7: 1) Downloading 'SRR5758252'... 2020-06-15T23:21:31 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:23:21 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:23:21 prefetch.2.10.7: 1) 'SRR5758252' was downloaded successfully 2020-06-15T23:23:21 prefetch.2.10.7: 'SRR5758252' has 0 unresolved dependencies Read 33910439 spots for SRR5758252/SRR5758252.sra Written 33910439 spots for SRR5758252/SRR5758252.sra 2020-06-15T23:25:13 prefetch.2.10.7: 1) Downloading 'SRR5758253'... 2020-06-15T23:25:13 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:27:37 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:27:38 prefetch.2.10.7: 'SRR5758253' is valid 2020-06-15T23:27:38 prefetch.2.10.7: 1) 'SRR5758253' was downloaded successfully 2020-06-15T23:27:38 prefetch.2.10.7: 'SRR5758253' has 0 unresolved dependencies Read 26002792 spots for SRR5758253/SRR5758253.sra Written 26002792 spots for SRR5758253/SRR5758253.sra 2020-06-15T23:29:15 prefetch.2.10.7: 1) Downloading 'SRR5758254'... 2020-06-15T23:29:15 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:33:48 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:33:48 prefetch.2.10.7: 1) 'SRR5758254' was downloaded successfully 2020-06-15T23:33:48 prefetch.2.10.7: 'SRR5758254' has 0 unresolved dependencies Read 32679795 spots for SRR5758254/SRR5758254.sra Written 32679795 spots for SRR5758254/SRR5758254.sra 2020-06-15T23:35:46 prefetch.2.10.7: 1) Downloading 'SRR5758255'... 2020-06-15T23:35:46 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T23:39:07 prefetch.2.10.7: HTTPS download succeed 2020-06-15T23:39:07 prefetch.2.10.7: 1) 'SRR5758255' was downloaded successfully 2020-06-15T23:39:07 prefetch.2.10.7: 'SRR5758255' has 0 unresolved dependencies Read 32528916 spots for SRR5758255/SRR5758255.sra Written 32528916 spots for SRR5758255/SRR5758255.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:28:02 125121942 reads; of these: 125121942 (100.00%) were unpaired; of these: 21341628 (17.06%) aligned 0 times 84351148 (67.42%) aligned exactly 1 time 19429166 (15.53%) aligned >1 times 82.94% overall alignment rate Time searching: 00:28:02 Overall time: 00:28:02 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 44 files... [bam_rmdupse_core] 39606569 / 103780314 = 0.3816 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:27:32: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:27:32: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:27:32: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:27:38: 1000000 INFO @ Tue, 16 Jun 2020 09:27:43: 2000000 INFO @ Tue, 16 Jun 2020 09:27:49: 3000000 INFO @ Tue, 16 Jun 2020 09:27:55: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:28:00: 5000000 INFO @ Tue, 16 Jun 2020 09:28:03: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:28:03: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:28:03: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:28:06: 6000000 INFO @ Tue, 16 Jun 2020 09:28:09: 1000000 INFO @ Tue, 16 Jun 2020 09:28:12: 7000000 INFO @ Tue, 16 Jun 2020 09:28:16: 2000000 INFO @ Tue, 16 Jun 2020 09:28:19: 8000000 INFO @ Tue, 16 Jun 2020 09:28:22: 3000000 INFO @ Tue, 16 Jun 2020 09:28:25: 9000000 INFO @ Tue, 16 Jun 2020 09:28:28: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:28:31: 10000000 INFO @ Tue, 16 Jun 2020 09:28:32: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:28:32: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:28:32: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:28:34: 5000000 INFO @ Tue, 16 Jun 2020 09:28:37: 11000000 INFO @ Tue, 16 Jun 2020 09:28:38: 1000000 INFO @ Tue, 16 Jun 2020 09:28:40: 6000000 INFO @ Tue, 16 Jun 2020 09:28:44: 12000000 INFO @ Tue, 16 Jun 2020 09:28:45: 2000000 INFO @ Tue, 16 Jun 2020 09:28:47: 7000000 INFO @ Tue, 16 Jun 2020 09:28:50: 13000000 INFO @ Tue, 16 Jun 2020 09:28:51: 3000000 INFO @ Tue, 16 Jun 2020 09:28:53: 8000000 INFO @ Tue, 16 Jun 2020 09:28:56: 14000000 INFO @ Tue, 16 Jun 2020 09:28:57: 4000000 INFO @ Tue, 16 Jun 2020 09:28:59: 9000000 INFO @ Tue, 16 Jun 2020 09:29:02: 15000000 INFO @ Tue, 16 Jun 2020 09:29:04: 5000000 INFO @ Tue, 16 Jun 2020 09:29:06: 10000000 INFO @ Tue, 16 Jun 2020 09:29:09: 16000000 INFO @ Tue, 16 Jun 2020 09:29:10: 6000000 INFO @ Tue, 16 Jun 2020 09:29:12: 11000000 INFO @ Tue, 16 Jun 2020 09:29:15: 17000000 INFO @ Tue, 16 Jun 2020 09:29:16: 7000000 INFO @ Tue, 16 Jun 2020 09:29:18: 12000000 INFO @ Tue, 16 Jun 2020 09:29:21: 18000000 INFO @ Tue, 16 Jun 2020 09:29:22: 8000000 INFO @ Tue, 16 Jun 2020 09:29:24: 13000000 INFO @ Tue, 16 Jun 2020 09:29:27: 19000000 INFO @ Tue, 16 Jun 2020 09:29:29: 9000000 INFO @ Tue, 16 Jun 2020 09:29:31: 14000000 INFO @ Tue, 16 Jun 2020 09:29:34: 20000000 INFO @ Tue, 16 Jun 2020 09:29:35: 10000000 INFO @ Tue, 16 Jun 2020 09:29:37: 15000000 INFO @ Tue, 16 Jun 2020 09:29:40: 21000000 INFO @ Tue, 16 Jun 2020 09:29:41: 11000000 INFO @ Tue, 16 Jun 2020 09:29:43: 16000000 INFO @ Tue, 16 Jun 2020 09:29:46: 22000000 INFO @ Tue, 16 Jun 2020 09:29:47: 12000000 INFO @ Tue, 16 Jun 2020 09:29:49: 17000000 INFO @ Tue, 16 Jun 2020 09:29:53: 23000000 INFO @ Tue, 16 Jun 2020 09:29:54: 13000000 INFO @ Tue, 16 Jun 2020 09:29:56: 18000000 INFO @ Tue, 16 Jun 2020 09:29:59: 24000000 INFO @ Tue, 16 Jun 2020 09:30:00: 14000000 INFO @ Tue, 16 Jun 2020 09:30:02: 19000000 INFO @ Tue, 16 Jun 2020 09:30:06: 25000000 INFO @ Tue, 16 Jun 2020 09:30:07: 15000000 INFO @ Tue, 16 Jun 2020 09:30:09: 20000000 INFO @ Tue, 16 Jun 2020 09:30:12: 26000000 INFO @ Tue, 16 Jun 2020 09:30:13: 16000000 INFO @ Tue, 16 Jun 2020 09:30:15: 21000000 INFO @ Tue, 16 Jun 2020 09:30:19: 27000000 INFO @ Tue, 16 Jun 2020 09:30:19: 17000000 INFO @ Tue, 16 Jun 2020 09:30:22: 22000000 INFO @ Tue, 16 Jun 2020 09:30:25: 28000000 INFO @ Tue, 16 Jun 2020 09:30:26: 18000000 INFO @ Tue, 16 Jun 2020 09:30:28: 23000000 INFO @ Tue, 16 Jun 2020 09:30:32: 29000000 INFO @ Tue, 16 Jun 2020 09:30:32: 19000000 INFO @ Tue, 16 Jun 2020 09:30:34: 24000000 INFO @ Tue, 16 Jun 2020 09:30:38: 30000000 INFO @ Tue, 16 Jun 2020 09:30:38: 20000000 INFO @ Tue, 16 Jun 2020 09:30:40: 25000000 INFO @ Tue, 16 Jun 2020 09:30:44: 21000000 INFO @ Tue, 16 Jun 2020 09:30:44: 31000000 INFO @ Tue, 16 Jun 2020 09:30:46: 26000000 INFO @ Tue, 16 Jun 2020 09:30:51: 22000000 INFO @ Tue, 16 Jun 2020 09:30:51: 32000000 INFO @ Tue, 16 Jun 2020 09:30:53: 27000000 INFO @ Tue, 16 Jun 2020 09:30:57: 23000000 INFO @ Tue, 16 Jun 2020 09:30:57: 33000000 INFO @ Tue, 16 Jun 2020 09:30:59: 28000000 INFO @ Tue, 16 Jun 2020 09:31:03: 24000000 INFO @ Tue, 16 Jun 2020 09:31:04: 34000000 INFO @ Tue, 16 Jun 2020 09:31:05: 29000000 INFO @ Tue, 16 Jun 2020 09:31:09: 25000000 INFO @ Tue, 16 Jun 2020 09:31:10: 35000000 INFO @ Tue, 16 Jun 2020 09:31:11: 30000000 INFO @ Tue, 16 Jun 2020 09:31:15: 26000000 INFO @ Tue, 16 Jun 2020 09:31:16: 36000000 INFO @ Tue, 16 Jun 2020 09:31:17: 31000000 INFO @ Tue, 16 Jun 2020 09:31:21: 27000000 INFO @ Tue, 16 Jun 2020 09:31:22: 37000000 INFO @ Tue, 16 Jun 2020 09:31:24: 32000000 INFO @ Tue, 16 Jun 2020 09:31:27: 28000000 INFO @ Tue, 16 Jun 2020 09:31:29: 38000000 INFO @ Tue, 16 Jun 2020 09:31:30: 33000000 INFO @ Tue, 16 Jun 2020 09:31:34: 29000000 INFO @ Tue, 16 Jun 2020 09:31:35: 39000000 INFO @ Tue, 16 Jun 2020 09:31:36: 34000000 INFO @ Tue, 16 Jun 2020 09:31:40: 30000000 INFO @ Tue, 16 Jun 2020 09:31:41: 40000000 INFO @ Tue, 16 Jun 2020 09:31:42: 35000000 INFO @ Tue, 16 Jun 2020 09:31:46: 31000000 INFO @ Tue, 16 Jun 2020 09:31:47: 41000000 INFO @ Tue, 16 Jun 2020 09:31:48: 36000000 INFO @ Tue, 16 Jun 2020 09:31:52: 32000000 INFO @ Tue, 16 Jun 2020 09:31:53: 42000000 INFO @ Tue, 16 Jun 2020 09:31:54: 37000000 INFO @ Tue, 16 Jun 2020 09:31:58: 33000000 INFO @ Tue, 16 Jun 2020 09:31:59: 43000000 INFO @ Tue, 16 Jun 2020 09:32:01: 38000000 INFO @ Tue, 16 Jun 2020 09:32:04: 34000000 INFO @ Tue, 16 Jun 2020 09:32:05: 44000000 INFO @ Tue, 16 Jun 2020 09:32:07: 39000000 INFO @ Tue, 16 Jun 2020 09:32:11: 35000000 INFO @ Tue, 16 Jun 2020 09:32:12: 45000000 INFO @ Tue, 16 Jun 2020 09:32:13: 40000000 INFO @ Tue, 16 Jun 2020 09:32:17: 36000000 INFO @ Tue, 16 Jun 2020 09:32:18: 46000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 09:32:19: 41000000 INFO @ Tue, 16 Jun 2020 09:32:23: 37000000 INFO @ Tue, 16 Jun 2020 09:32:24: 47000000 INFO @ Tue, 16 Jun 2020 09:32:25: 42000000 INFO @ Tue, 16 Jun 2020 09:32:29: 38000000 INFO @ Tue, 16 Jun 2020 09:32:30: 48000000 INFO @ Tue, 16 Jun 2020 09:32:32: 43000000 INFO @ Tue, 16 Jun 2020 09:32:35: 39000000 INFO @ Tue, 16 Jun 2020 09:32:36: 49000000 INFO @ Tue, 16 Jun 2020 09:32:38: 44000000 INFO @ Tue, 16 Jun 2020 09:32:41: 40000000 INFO @ Tue, 16 Jun 2020 09:32:42: 50000000 INFO @ Tue, 16 Jun 2020 09:32:44: 45000000 INFO @ Tue, 16 Jun 2020 09:32:47: 41000000 INFO @ Tue, 16 Jun 2020 09:32:48: 51000000 INFO @ Tue, 16 Jun 2020 09:32:50: 46000000 INFO @ Tue, 16 Jun 2020 09:32:54: 42000000 INFO @ Tue, 16 Jun 2020 09:32:54: 52000000 INFO @ Tue, 16 Jun 2020 09:32:56: 47000000 INFO @ Tue, 16 Jun 2020 09:33:00: 43000000 INFO @ Tue, 16 Jun 2020 09:33:01: 53000000 INFO @ Tue, 16 Jun 2020 09:33:02: 48000000 INFO @ Tue, 16 Jun 2020 09:33:06: 44000000 INFO @ Tue, 16 Jun 2020 09:33:07: 54000000 INFO @ Tue, 16 Jun 2020 09:33:08: 49000000 INFO @ Tue, 16 Jun 2020 09:33:12: 45000000 INFO @ Tue, 16 Jun 2020 09:33:13: 55000000 INFO @ Tue, 16 Jun 2020 09:33:14: 50000000 INFO @ Tue, 16 Jun 2020 09:33:18: 46000000 INFO @ Tue, 16 Jun 2020 09:33:18: 56000000 INFO @ Tue, 16 Jun 2020 09:33:20: 51000000 INFO @ Tue, 16 Jun 2020 09:33:24: 47000000 INFO @ Tue, 16 Jun 2020 09:33:24: 57000000 INFO @ Tue, 16 Jun 2020 09:33:26: 52000000 INFO @ Tue, 16 Jun 2020 09:33:30: 48000000 INFO @ Tue, 16 Jun 2020 09:33:30: 58000000 INFO @ Tue, 16 Jun 2020 09:33:32: 53000000 INFO @ Tue, 16 Jun 2020 09:33:36: 49000000 INFO @ Tue, 16 Jun 2020 09:33:36: 59000000 INFO @ Tue, 16 Jun 2020 09:33:38: 54000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 09:33:42: 50000000 INFO @ Tue, 16 Jun 2020 09:33:42: 60000000 INFO @ Tue, 16 Jun 2020 09:33:43: 55000000 INFO @ Tue, 16 Jun 2020 09:33:48: 51000000 INFO @ Tue, 16 Jun 2020 09:33:48: 61000000 INFO @ Tue, 16 Jun 2020 09:33:49: 56000000 INFO @ Tue, 16 Jun 2020 09:33:54: 52000000 INFO @ Tue, 16 Jun 2020 09:33:54: 62000000 INFO @ Tue, 16 Jun 2020 09:33:55: 57000000 INFO @ Tue, 16 Jun 2020 09:34:00: 53000000 INFO @ Tue, 16 Jun 2020 09:34:00: 63000000 INFO @ Tue, 16 Jun 2020 09:34:01: 58000000 INFO @ Tue, 16 Jun 2020 09:34:06: 54000000 INFO @ Tue, 16 Jun 2020 09:34:06: 64000000 INFO @ Tue, 16 Jun 2020 09:34:07: 59000000 INFO @ Tue, 16 Jun 2020 09:34:07: #1 tag size is determined as 51 bps INFO @ Tue, 16 Jun 2020 09:34:07: #1 tag size = 51 INFO @ Tue, 16 Jun 2020 09:34:07: #1 total tags in treatment: 64173745 INFO @ Tue, 16 Jun 2020 09:34:07: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:34:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:34:08: #1 tags after filtering in treatment: 64173745 INFO @ Tue, 16 Jun 2020 09:34:08: #1 Redundant rate of treatment: 0.00 INFO @ Tue, 16 Jun 2020 09:34:08: #1 finished! INFO @ Tue, 16 Jun 2020 09:34:08: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:34:08: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:34:12: 55000000 INFO @ Tue, 16 Jun 2020 09:34:12: #2 number of paired peaks: 0 WARNING @ Tue, 16 Jun 2020 09:34:12: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 09:34:12: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:34:13: 60000000 INFO @ Tue, 16 Jun 2020 09:34:18: 56000000 INFO @ Tue, 16 Jun 2020 09:34:19: 61000000 INFO @ Tue, 16 Jun 2020 09:34:24: 57000000 INFO @ Tue, 16 Jun 2020 09:34:25: 62000000 INFO @ Tue, 16 Jun 2020 09:34:30: 58000000 INFO @ Tue, 16 Jun 2020 09:34:31: 63000000 INFO @ Tue, 16 Jun 2020 09:34:36: 59000000 INFO @ Tue, 16 Jun 2020 09:34:37: 64000000 INFO @ Tue, 16 Jun 2020 09:34:39: #1 tag size is determined as 51 bps INFO @ Tue, 16 Jun 2020 09:34:39: #1 tag size = 51 INFO @ Tue, 16 Jun 2020 09:34:39: #1 total tags in treatment: 64173745 INFO @ Tue, 16 Jun 2020 09:34:39: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:34:39: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:34:40: #1 tags after filtering in treatment: 64173745 INFO @ Tue, 16 Jun 2020 09:34:40: #1 Redundant rate of treatment: 0.00 INFO @ Tue, 16 Jun 2020 09:34:40: #1 finished! INFO @ Tue, 16 Jun 2020 09:34:40: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:34:40: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:34:41: 60000000 INFO @ Tue, 16 Jun 2020 09:34:44: #2 number of paired peaks: 0 WARNING @ Tue, 16 Jun 2020 09:34:44: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 09:34:44: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:34:47: 61000000 INFO @ Tue, 16 Jun 2020 09:34:52: 62000000 INFO @ Tue, 16 Jun 2020 09:34:58: 63000000 INFO @ Tue, 16 Jun 2020 09:35:03: 64000000 INFO @ Tue, 16 Jun 2020 09:35:05: #1 tag size is determined as 51 bps INFO @ Tue, 16 Jun 2020 09:35:05: #1 tag size = 51 INFO @ Tue, 16 Jun 2020 09:35:05: #1 total tags in treatment: 64173745 INFO @ Tue, 16 Jun 2020 09:35:05: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:35:05: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:35:06: #1 tags after filtering in treatment: 64173745 INFO @ Tue, 16 Jun 2020 09:35:06: #1 Redundant rate of treatment: 0.00 INFO @ Tue, 16 Jun 2020 09:35:06: #1 finished! INFO @ Tue, 16 Jun 2020 09:35:06: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:35:06: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:35:10: #2 number of paired peaks: 0 WARNING @ Tue, 16 Jun 2020 09:35:10: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 09:35:10: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX2958249/SRX2958249.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling