Job ID = 6366575 SRX = SRX1995067 Genome = ce11 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-15T22:54:29 prefetch.2.10.7: 1) Downloading 'SRR3993999'... 2020-06-15T22:54:29 prefetch.2.10.7: Downloading via HTTPS... 2020-06-15T22:59:09 prefetch.2.10.7: HTTPS download succeed 2020-06-15T22:59:09 prefetch.2.10.7: 1) 'SRR3993999' was downloaded successfully Read 41044796 spots for SRR3993999/SRR3993999.sra Written 41044796 spots for SRR3993999/SRR3993999.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:37:09 41044796 reads; of these: 41044796 (100.00%) were paired; of these: 2997360 (7.30%) aligned concordantly 0 times 31648461 (77.11%) aligned concordantly exactly 1 time 6398975 (15.59%) aligned concordantly >1 times ---- 2997360 pairs aligned concordantly 0 times; of these: 1219816 (40.70%) aligned discordantly 1 time ---- 1777544 pairs aligned 0 times concordantly or discordantly; of these: 3555088 mates make up the pairs; of these: 1976410 (55.59%) aligned 0 times 961843 (27.06%) aligned exactly 1 time 616835 (17.35%) aligned >1 times 97.59% overall alignment rate Time searching: 00:37:09 Overall time: 00:37:09 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 624360 / 38407158 = 0.0163 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:01:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:01:56: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:01:56: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:02:02: 1000000 INFO @ Tue, 16 Jun 2020 09:02:08: 2000000 INFO @ Tue, 16 Jun 2020 09:02:14: 3000000 INFO @ Tue, 16 Jun 2020 09:02:20: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:02:26: 5000000 INFO @ Tue, 16 Jun 2020 09:02:26: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:02:26: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:02:26: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:02:32: 6000000 INFO @ Tue, 16 Jun 2020 09:02:33: 1000000 INFO @ Tue, 16 Jun 2020 09:02:39: 7000000 INFO @ Tue, 16 Jun 2020 09:02:40: 2000000 INFO @ Tue, 16 Jun 2020 09:02:46: 8000000 INFO @ Tue, 16 Jun 2020 09:02:46: 3000000 INFO @ Tue, 16 Jun 2020 09:02:52: 9000000 INFO @ Tue, 16 Jun 2020 09:02:53: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 16 Jun 2020 09:02:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 16 Jun 2020 09:02:56: #1 read tag files... INFO @ Tue, 16 Jun 2020 09:02:56: #1 read treatment tags... INFO @ Tue, 16 Jun 2020 09:02:59: 10000000 INFO @ Tue, 16 Jun 2020 09:03:00: 5000000 INFO @ Tue, 16 Jun 2020 09:03:03: 1000000 INFO @ Tue, 16 Jun 2020 09:03:06: 11000000 INFO @ Tue, 16 Jun 2020 09:03:07: 6000000 INFO @ Tue, 16 Jun 2020 09:03:10: 2000000 INFO @ Tue, 16 Jun 2020 09:03:13: 12000000 INFO @ Tue, 16 Jun 2020 09:03:14: 7000000 INFO @ Tue, 16 Jun 2020 09:03:17: 3000000 INFO @ Tue, 16 Jun 2020 09:03:20: 13000000 INFO @ Tue, 16 Jun 2020 09:03:21: 8000000 INFO @ Tue, 16 Jun 2020 09:03:24: 4000000 INFO @ Tue, 16 Jun 2020 09:03:27: 14000000 INFO @ Tue, 16 Jun 2020 09:03:28: 9000000 INFO @ Tue, 16 Jun 2020 09:03:31: 5000000 INFO @ Tue, 16 Jun 2020 09:03:34: 15000000 INFO @ Tue, 16 Jun 2020 09:03:35: 10000000 INFO @ Tue, 16 Jun 2020 09:03:37: 6000000 INFO @ Tue, 16 Jun 2020 09:03:41: 16000000 INFO @ Tue, 16 Jun 2020 09:03:42: 11000000 INFO @ Tue, 16 Jun 2020 09:03:44: 7000000 INFO @ Tue, 16 Jun 2020 09:03:48: 17000000 INFO @ Tue, 16 Jun 2020 09:03:49: 12000000 INFO @ Tue, 16 Jun 2020 09:03:51: 8000000 INFO @ Tue, 16 Jun 2020 09:03:55: 18000000 INFO @ Tue, 16 Jun 2020 09:03:56: 13000000 INFO @ Tue, 16 Jun 2020 09:03:58: 9000000 INFO @ Tue, 16 Jun 2020 09:04:02: 19000000 INFO @ Tue, 16 Jun 2020 09:04:03: 14000000 INFO @ Tue, 16 Jun 2020 09:04:05: 10000000 INFO @ Tue, 16 Jun 2020 09:04:09: 20000000 INFO @ Tue, 16 Jun 2020 09:04:10: 15000000 INFO @ Tue, 16 Jun 2020 09:04:12: 11000000 INFO @ Tue, 16 Jun 2020 09:04:16: 21000000 INFO @ Tue, 16 Jun 2020 09:04:17: 16000000 INFO @ Tue, 16 Jun 2020 09:04:19: 12000000 INFO @ Tue, 16 Jun 2020 09:04:22: 22000000 INFO @ Tue, 16 Jun 2020 09:04:23: 17000000 INFO @ Tue, 16 Jun 2020 09:04:26: 13000000 INFO @ Tue, 16 Jun 2020 09:04:29: 23000000 INFO @ Tue, 16 Jun 2020 09:04:30: 18000000 INFO @ Tue, 16 Jun 2020 09:04:33: 14000000 INFO @ Tue, 16 Jun 2020 09:04:36: 24000000 INFO @ Tue, 16 Jun 2020 09:04:37: 19000000 INFO @ Tue, 16 Jun 2020 09:04:40: 15000000 INFO @ Tue, 16 Jun 2020 09:04:43: 25000000 INFO @ Tue, 16 Jun 2020 09:04:44: 20000000 INFO @ Tue, 16 Jun 2020 09:04:47: 16000000 INFO @ Tue, 16 Jun 2020 09:04:49: 26000000 INFO @ Tue, 16 Jun 2020 09:04:51: 21000000 INFO @ Tue, 16 Jun 2020 09:04:54: 17000000 INFO @ Tue, 16 Jun 2020 09:04:56: 27000000 INFO @ Tue, 16 Jun 2020 09:04:58: 22000000 INFO @ Tue, 16 Jun 2020 09:05:01: 18000000 INFO @ Tue, 16 Jun 2020 09:05:03: 28000000 INFO @ Tue, 16 Jun 2020 09:05:04: 23000000 INFO @ Tue, 16 Jun 2020 09:05:08: 19000000 INFO @ Tue, 16 Jun 2020 09:05:10: 29000000 INFO @ Tue, 16 Jun 2020 09:05:11: 24000000 INFO @ Tue, 16 Jun 2020 09:05:15: 20000000 INFO @ Tue, 16 Jun 2020 09:05:17: 30000000 INFO @ Tue, 16 Jun 2020 09:05:18: 25000000 INFO @ Tue, 16 Jun 2020 09:05:23: 21000000 INFO @ Tue, 16 Jun 2020 09:05:24: 31000000 INFO @ Tue, 16 Jun 2020 09:05:25: 26000000 INFO @ Tue, 16 Jun 2020 09:05:30: 22000000 INFO @ Tue, 16 Jun 2020 09:05:31: 32000000 INFO @ Tue, 16 Jun 2020 09:05:32: 27000000 INFO @ Tue, 16 Jun 2020 09:05:37: 23000000 INFO @ Tue, 16 Jun 2020 09:05:38: 33000000 INFO @ Tue, 16 Jun 2020 09:05:39: 28000000 INFO @ Tue, 16 Jun 2020 09:05:44: 24000000 INFO @ Tue, 16 Jun 2020 09:05:45: 34000000 INFO @ Tue, 16 Jun 2020 09:05:45: 29000000 INFO @ Tue, 16 Jun 2020 09:05:50: 25000000 INFO @ Tue, 16 Jun 2020 09:05:51: 35000000 INFO @ Tue, 16 Jun 2020 09:05:52: 30000000 INFO @ Tue, 16 Jun 2020 09:05:57: 26000000 INFO @ Tue, 16 Jun 2020 09:05:58: 36000000 INFO @ Tue, 16 Jun 2020 09:05:59: 31000000 INFO @ Tue, 16 Jun 2020 09:06:04: 27000000 INFO @ Tue, 16 Jun 2020 09:06:05: 37000000 INFO @ Tue, 16 Jun 2020 09:06:06: 32000000 INFO @ Tue, 16 Jun 2020 09:06:11: 28000000 INFO @ Tue, 16 Jun 2020 09:06:12: 38000000 INFO @ Tue, 16 Jun 2020 09:06:12: 33000000 INFO @ Tue, 16 Jun 2020 09:06:18: 29000000 INFO @ Tue, 16 Jun 2020 09:06:19: 39000000 INFO @ Tue, 16 Jun 2020 09:06:19: 34000000 INFO @ Tue, 16 Jun 2020 09:06:25: 30000000 INFO @ Tue, 16 Jun 2020 09:06:25: 40000000 INFO @ Tue, 16 Jun 2020 09:06:26: 35000000 INFO @ Tue, 16 Jun 2020 09:06:31: 31000000 INFO @ Tue, 16 Jun 2020 09:06:32: 41000000 INFO @ Tue, 16 Jun 2020 09:06:32: 36000000 INFO @ Tue, 16 Jun 2020 09:06:38: 32000000 INFO @ Tue, 16 Jun 2020 09:06:38: 42000000 INFO @ Tue, 16 Jun 2020 09:06:39: 37000000 INFO @ Tue, 16 Jun 2020 09:06:45: 33000000 INFO @ Tue, 16 Jun 2020 09:06:45: 43000000 INFO @ Tue, 16 Jun 2020 09:06:46: 38000000 INFO @ Tue, 16 Jun 2020 09:06:52: 34000000 INFO @ Tue, 16 Jun 2020 09:06:52: 44000000 INFO @ Tue, 16 Jun 2020 09:06:52: 39000000 INFO @ Tue, 16 Jun 2020 09:06:58: 45000000 INFO @ Tue, 16 Jun 2020 09:06:59: 35000000 INFO @ Tue, 16 Jun 2020 09:06:59: 40000000 INFO @ Tue, 16 Jun 2020 09:07:05: 46000000 INFO @ Tue, 16 Jun 2020 09:07:06: 36000000 INFO @ Tue, 16 Jun 2020 09:07:06: 41000000 INFO @ Tue, 16 Jun 2020 09:07:12: 47000000 INFO @ Tue, 16 Jun 2020 09:07:12: 37000000 INFO @ Tue, 16 Jun 2020 09:07:12: 42000000 INFO @ Tue, 16 Jun 2020 09:07:18: 48000000 INFO @ Tue, 16 Jun 2020 09:07:19: 43000000 INFO @ Tue, 16 Jun 2020 09:07:19: 38000000 INFO @ Tue, 16 Jun 2020 09:07:25: 49000000 INFO @ Tue, 16 Jun 2020 09:07:25: 44000000 INFO @ Tue, 16 Jun 2020 09:07:26: 39000000 INFO @ Tue, 16 Jun 2020 09:07:32: 50000000 INFO @ Tue, 16 Jun 2020 09:07:32: 45000000 INFO @ Tue, 16 Jun 2020 09:07:32: 40000000 INFO @ Tue, 16 Jun 2020 09:07:38: 51000000 INFO @ Tue, 16 Jun 2020 09:07:39: 46000000 INFO @ Tue, 16 Jun 2020 09:07:39: 41000000 INFO @ Tue, 16 Jun 2020 09:07:45: 52000000 INFO @ Tue, 16 Jun 2020 09:07:45: 47000000 INFO @ Tue, 16 Jun 2020 09:07:45: 42000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 16 Jun 2020 09:07:52: 53000000 INFO @ Tue, 16 Jun 2020 09:07:52: 48000000 INFO @ Tue, 16 Jun 2020 09:07:52: 43000000 INFO @ Tue, 16 Jun 2020 09:07:58: 54000000 INFO @ Tue, 16 Jun 2020 09:07:59: 49000000 INFO @ Tue, 16 Jun 2020 09:07:59: 44000000 INFO @ Tue, 16 Jun 2020 09:08:05: 55000000 INFO @ Tue, 16 Jun 2020 09:08:06: 50000000 INFO @ Tue, 16 Jun 2020 09:08:07: 45000000 INFO @ Tue, 16 Jun 2020 09:08:12: 56000000 INFO @ Tue, 16 Jun 2020 09:08:12: 51000000 INFO @ Tue, 16 Jun 2020 09:08:14: 46000000 INFO @ Tue, 16 Jun 2020 09:08:19: 57000000 INFO @ Tue, 16 Jun 2020 09:08:19: 52000000 INFO @ Tue, 16 Jun 2020 09:08:21: 47000000 INFO @ Tue, 16 Jun 2020 09:08:26: 58000000 INFO @ Tue, 16 Jun 2020 09:08:26: 53000000 INFO @ Tue, 16 Jun 2020 09:08:29: 48000000 INFO @ Tue, 16 Jun 2020 09:08:33: 54000000 INFO @ Tue, 16 Jun 2020 09:08:33: 59000000 INFO @ Tue, 16 Jun 2020 09:08:36: 49000000 INFO @ Tue, 16 Jun 2020 09:08:40: 55000000 INFO @ Tue, 16 Jun 2020 09:08:41: 60000000 INFO @ Tue, 16 Jun 2020 09:08:44: 50000000 INFO @ Tue, 16 Jun 2020 09:08:47: 56000000 INFO @ Tue, 16 Jun 2020 09:08:48: 61000000 INFO @ Tue, 16 Jun 2020 09:08:51: 51000000 INFO @ Tue, 16 Jun 2020 09:08:54: 57000000 INFO @ Tue, 16 Jun 2020 09:08:56: 62000000 INFO @ Tue, 16 Jun 2020 09:08:59: 52000000 INFO @ Tue, 16 Jun 2020 09:09:01: 58000000 INFO @ Tue, 16 Jun 2020 09:09:04: 63000000 INFO @ Tue, 16 Jun 2020 09:09:08: 53000000 INFO @ Tue, 16 Jun 2020 09:09:09: 59000000 INFO @ Tue, 16 Jun 2020 09:09:13: 64000000 INFO @ Tue, 16 Jun 2020 09:09:16: 60000000 INFO @ Tue, 16 Jun 2020 09:09:17: 54000000 INFO @ Tue, 16 Jun 2020 09:09:21: 65000000 BigWig に変換しました。 INFO @ Tue, 16 Jun 2020 09:09:24: 61000000 INFO @ Tue, 16 Jun 2020 09:09:25: 55000000 INFO @ Tue, 16 Jun 2020 09:09:29: 66000000 INFO @ Tue, 16 Jun 2020 09:09:31: 62000000 INFO @ Tue, 16 Jun 2020 09:09:34: 56000000 INFO @ Tue, 16 Jun 2020 09:09:37: 67000000 INFO @ Tue, 16 Jun 2020 09:09:39: 63000000 INFO @ Tue, 16 Jun 2020 09:09:42: 57000000 INFO @ Tue, 16 Jun 2020 09:09:45: 68000000 INFO @ Tue, 16 Jun 2020 09:09:46: 64000000 INFO @ Tue, 16 Jun 2020 09:09:51: 58000000 INFO @ Tue, 16 Jun 2020 09:09:53: 69000000 INFO @ Tue, 16 Jun 2020 09:09:54: 65000000 INFO @ Tue, 16 Jun 2020 09:10:00: 59000000 INFO @ Tue, 16 Jun 2020 09:10:01: 70000000 INFO @ Tue, 16 Jun 2020 09:10:01: 66000000 INFO @ Tue, 16 Jun 2020 09:10:09: 67000000 INFO @ Tue, 16 Jun 2020 09:10:09: 71000000 INFO @ Tue, 16 Jun 2020 09:10:10: 60000000 INFO @ Tue, 16 Jun 2020 09:10:17: 68000000 INFO @ Tue, 16 Jun 2020 09:10:17: 72000000 INFO @ Tue, 16 Jun 2020 09:10:19: 61000000 INFO @ Tue, 16 Jun 2020 09:10:24: 69000000 INFO @ Tue, 16 Jun 2020 09:10:25: 73000000 INFO @ Tue, 16 Jun 2020 09:10:29: 62000000 INFO @ Tue, 16 Jun 2020 09:10:32: 70000000 INFO @ Tue, 16 Jun 2020 09:10:33: 74000000 INFO @ Tue, 16 Jun 2020 09:10:38: 63000000 INFO @ Tue, 16 Jun 2020 09:10:40: 71000000 INFO @ Tue, 16 Jun 2020 09:10:41: 75000000 INFO @ Tue, 16 Jun 2020 09:10:47: 72000000 INFO @ Tue, 16 Jun 2020 09:10:48: 64000000 INFO @ Tue, 16 Jun 2020 09:10:49: 76000000 INFO @ Tue, 16 Jun 2020 09:10:55: 73000000 INFO @ Tue, 16 Jun 2020 09:10:57: 77000000 INFO @ Tue, 16 Jun 2020 09:10:57: 65000000 INFO @ Tue, 16 Jun 2020 09:11:02: 74000000 INFO @ Tue, 16 Jun 2020 09:11:04: 78000000 INFO @ Tue, 16 Jun 2020 09:11:06: 66000000 INFO @ Tue, 16 Jun 2020 09:11:10: 75000000 INFO @ Tue, 16 Jun 2020 09:11:11: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 09:11:11: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 09:11:11: #1 total tags in treatment: 37425320 INFO @ Tue, 16 Jun 2020 09:11:11: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:11:11: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:11:12: #1 tags after filtering in treatment: 31615156 INFO @ Tue, 16 Jun 2020 09:11:12: #1 Redundant rate of treatment: 0.16 INFO @ Tue, 16 Jun 2020 09:11:12: #1 finished! INFO @ Tue, 16 Jun 2020 09:11:12: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:11:12: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:11:14: #2 number of paired peaks: 90 WARNING @ Tue, 16 Jun 2020 09:11:14: Too few paired peaks (90) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 09:11:14: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:11:15: 67000000 INFO @ Tue, 16 Jun 2020 09:11:17: 76000000 INFO @ Tue, 16 Jun 2020 09:11:23: 68000000 INFO @ Tue, 16 Jun 2020 09:11:25: 77000000 INFO @ Tue, 16 Jun 2020 09:11:31: 69000000 INFO @ Tue, 16 Jun 2020 09:11:32: 78000000 INFO @ Tue, 16 Jun 2020 09:11:39: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 09:11:39: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 09:11:39: #1 total tags in treatment: 37425320 INFO @ Tue, 16 Jun 2020 09:11:39: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:11:39: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:11:39: 70000000 INFO @ Tue, 16 Jun 2020 09:11:39: #1 tags after filtering in treatment: 31615156 INFO @ Tue, 16 Jun 2020 09:11:39: #1 Redundant rate of treatment: 0.16 INFO @ Tue, 16 Jun 2020 09:11:39: #1 finished! INFO @ Tue, 16 Jun 2020 09:11:39: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:11:39: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:11:42: #2 number of paired peaks: 90 WARNING @ Tue, 16 Jun 2020 09:11:42: Too few paired peaks (90) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 09:11:42: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 16 Jun 2020 09:11:47: 71000000 INFO @ Tue, 16 Jun 2020 09:11:54: 72000000 INFO @ Tue, 16 Jun 2020 09:12:01: 73000000 INFO @ Tue, 16 Jun 2020 09:12:09: 74000000 INFO @ Tue, 16 Jun 2020 09:12:16: 75000000 INFO @ Tue, 16 Jun 2020 09:12:23: 76000000 INFO @ Tue, 16 Jun 2020 09:12:30: 77000000 INFO @ Tue, 16 Jun 2020 09:12:37: 78000000 INFO @ Tue, 16 Jun 2020 09:12:44: #1 tag size is determined as 50 bps INFO @ Tue, 16 Jun 2020 09:12:44: #1 tag size = 50 INFO @ Tue, 16 Jun 2020 09:12:44: #1 total tags in treatment: 37425320 INFO @ Tue, 16 Jun 2020 09:12:44: #1 user defined the maximum tags... INFO @ Tue, 16 Jun 2020 09:12:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 16 Jun 2020 09:12:44: #1 tags after filtering in treatment: 31615156 INFO @ Tue, 16 Jun 2020 09:12:44: #1 Redundant rate of treatment: 0.16 INFO @ Tue, 16 Jun 2020 09:12:44: #1 finished! INFO @ Tue, 16 Jun 2020 09:12:44: #2 Build Peak Model... INFO @ Tue, 16 Jun 2020 09:12:44: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 16 Jun 2020 09:12:47: #2 number of paired peaks: 90 WARNING @ Tue, 16 Jun 2020 09:12:47: Too few paired peaks (90) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 16 Jun 2020 09:12:47: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce11/SRX1995067/SRX1995067.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling