Job ID = 12264827 SRX = SRX7687150 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 29736773 spots for SRR11034893/SRR11034893.sra Written 29736773 spots for SRR11034893/SRR11034893.sra fastq に変換しました。 bowtie でマッピング中... Your job 12265492 ("srTce11") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:49:53 29736773 reads; of these: 29736773 (100.00%) were paired; of these: 6139869 (20.65%) aligned concordantly 0 times 18989775 (63.86%) aligned concordantly exactly 1 time 4607129 (15.49%) aligned concordantly >1 times ---- 6139869 pairs aligned concordantly 0 times; of these: 4541944 (73.97%) aligned discordantly 1 time ---- 1597925 pairs aligned 0 times concordantly or discordantly; of these: 3195850 mates make up the pairs; of these: 1303892 (40.80%) aligned 0 times 691483 (21.64%) aligned exactly 1 time 1200475 (37.56%) aligned >1 times 97.81% overall alignment rate Time searching: 00:49:53 Overall time: 00:49:53 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 5860746 / 28107065 = 0.2085 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:06:22: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:06:22: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:06:22: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:06:29: 1000000 INFO @ Sat, 03 Apr 2021 07:06:37: 2000000 INFO @ Sat, 03 Apr 2021 07:06:44: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:06:51: 4000000 INFO @ Sat, 03 Apr 2021 07:06:52: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:06:52: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:06:52: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:06:59: 5000000 INFO @ Sat, 03 Apr 2021 07:07:00: 1000000 INFO @ Sat, 03 Apr 2021 07:07:06: 6000000 INFO @ Sat, 03 Apr 2021 07:07:08: 2000000 INFO @ Sat, 03 Apr 2021 07:07:13: 7000000 INFO @ Sat, 03 Apr 2021 07:07:15: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:07:21: 8000000 INFO @ Sat, 03 Apr 2021 07:07:22: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:07:22: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:07:22: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:07:23: 4000000 INFO @ Sat, 03 Apr 2021 07:07:29: 9000000 INFO @ Sat, 03 Apr 2021 07:07:30: 5000000 INFO @ Sat, 03 Apr 2021 07:07:31: 1000000 INFO @ Sat, 03 Apr 2021 07:07:36: 10000000 INFO @ Sat, 03 Apr 2021 07:07:38: 6000000 INFO @ Sat, 03 Apr 2021 07:07:39: 2000000 INFO @ Sat, 03 Apr 2021 07:07:44: 11000000 INFO @ Sat, 03 Apr 2021 07:07:45: 7000000 INFO @ Sat, 03 Apr 2021 07:07:46: 3000000 INFO @ Sat, 03 Apr 2021 07:07:51: 12000000 INFO @ Sat, 03 Apr 2021 07:07:54: 8000000 INFO @ Sat, 03 Apr 2021 07:07:54: 4000000 INFO @ Sat, 03 Apr 2021 07:08:00: 13000000 INFO @ Sat, 03 Apr 2021 07:08:02: 5000000 INFO @ Sat, 03 Apr 2021 07:08:02: 9000000 INFO @ Sat, 03 Apr 2021 07:08:08: 14000000 INFO @ Sat, 03 Apr 2021 07:08:10: 6000000 INFO @ Sat, 03 Apr 2021 07:08:11: 10000000 INFO @ Sat, 03 Apr 2021 07:08:15: 15000000 INFO @ Sat, 03 Apr 2021 07:08:18: 7000000 INFO @ Sat, 03 Apr 2021 07:08:19: 11000000 INFO @ Sat, 03 Apr 2021 07:08:23: 16000000 INFO @ Sat, 03 Apr 2021 07:08:26: 8000000 INFO @ Sat, 03 Apr 2021 07:08:28: 12000000 INFO @ Sat, 03 Apr 2021 07:08:31: 17000000 INFO @ Sat, 03 Apr 2021 07:08:34: 9000000 INFO @ Sat, 03 Apr 2021 07:08:37: 13000000 INFO @ Sat, 03 Apr 2021 07:08:39: 18000000 INFO @ Sat, 03 Apr 2021 07:08:42: 10000000 INFO @ Sat, 03 Apr 2021 07:08:46: 14000000 INFO @ Sat, 03 Apr 2021 07:08:47: 19000000 INFO @ Sat, 03 Apr 2021 07:08:50: 11000000 INFO @ Sat, 03 Apr 2021 07:08:55: 20000000 INFO @ Sat, 03 Apr 2021 07:08:55: 15000000 INFO @ Sat, 03 Apr 2021 07:08:58: 12000000 INFO @ Sat, 03 Apr 2021 07:09:02: 21000000 INFO @ Sat, 03 Apr 2021 07:09:04: 16000000 INFO @ Sat, 03 Apr 2021 07:09:06: 13000000 INFO @ Sat, 03 Apr 2021 07:09:10: 22000000 INFO @ Sat, 03 Apr 2021 07:09:13: 17000000 INFO @ Sat, 03 Apr 2021 07:09:15: 14000000 INFO @ Sat, 03 Apr 2021 07:09:18: 23000000 INFO @ Sat, 03 Apr 2021 07:09:23: 18000000 INFO @ Sat, 03 Apr 2021 07:09:23: 15000000 INFO @ Sat, 03 Apr 2021 07:09:26: 24000000 INFO @ Sat, 03 Apr 2021 07:09:31: 19000000 INFO @ Sat, 03 Apr 2021 07:09:31: 16000000 INFO @ Sat, 03 Apr 2021 07:09:34: 25000000 INFO @ Sat, 03 Apr 2021 07:09:40: 17000000 INFO @ Sat, 03 Apr 2021 07:09:40: 20000000 INFO @ Sat, 03 Apr 2021 07:09:43: 26000000 INFO @ Sat, 03 Apr 2021 07:09:48: 18000000 INFO @ Sat, 03 Apr 2021 07:09:48: 21000000 INFO @ Sat, 03 Apr 2021 07:09:51: 27000000 INFO @ Sat, 03 Apr 2021 07:09:55: 19000000 INFO @ Sat, 03 Apr 2021 07:09:57: 22000000 INFO @ Sat, 03 Apr 2021 07:09:59: 28000000 INFO @ Sat, 03 Apr 2021 07:10:03: 20000000 INFO @ Sat, 03 Apr 2021 07:10:05: 23000000 INFO @ Sat, 03 Apr 2021 07:10:07: 29000000 INFO @ Sat, 03 Apr 2021 07:10:11: 21000000 INFO @ Sat, 03 Apr 2021 07:10:14: 24000000 INFO @ Sat, 03 Apr 2021 07:10:15: 30000000 INFO @ Sat, 03 Apr 2021 07:10:19: 22000000 INFO @ Sat, 03 Apr 2021 07:10:22: 25000000 INFO @ Sat, 03 Apr 2021 07:10:23: 31000000 INFO @ Sat, 03 Apr 2021 07:10:27: 23000000 INFO @ Sat, 03 Apr 2021 07:10:31: 26000000 INFO @ Sat, 03 Apr 2021 07:10:31: 32000000 INFO @ Sat, 03 Apr 2021 07:10:35: 24000000 INFO @ Sat, 03 Apr 2021 07:10:38: 33000000 INFO @ Sat, 03 Apr 2021 07:10:39: 27000000 INFO @ Sat, 03 Apr 2021 07:10:42: 25000000 INFO @ Sat, 03 Apr 2021 07:10:46: 34000000 INFO @ Sat, 03 Apr 2021 07:10:48: 28000000 INFO @ Sat, 03 Apr 2021 07:10:50: 26000000 INFO @ Sat, 03 Apr 2021 07:10:53: 35000000 INFO @ Sat, 03 Apr 2021 07:10:56: 29000000 INFO @ Sat, 03 Apr 2021 07:10:57: 27000000 INFO @ Sat, 03 Apr 2021 07:11:01: 36000000 INFO @ Sat, 03 Apr 2021 07:11:05: 30000000 INFO @ Sat, 03 Apr 2021 07:11:05: 28000000 INFO @ Sat, 03 Apr 2021 07:11:08: 37000000 INFO @ Sat, 03 Apr 2021 07:11:13: 29000000 INFO @ Sat, 03 Apr 2021 07:11:13: 31000000 INFO @ Sat, 03 Apr 2021 07:11:16: 38000000 INFO @ Sat, 03 Apr 2021 07:11:21: 30000000 INFO @ Sat, 03 Apr 2021 07:11:22: 32000000 INFO @ Sat, 03 Apr 2021 07:11:23: 39000000 INFO @ Sat, 03 Apr 2021 07:11:30: 31000000 INFO @ Sat, 03 Apr 2021 07:11:30: 33000000 INFO @ Sat, 03 Apr 2021 07:11:31: 40000000 INFO @ Sat, 03 Apr 2021 07:11:38: 32000000 INFO @ Sat, 03 Apr 2021 07:11:39: 41000000 INFO @ Sat, 03 Apr 2021 07:11:39: 34000000 INFO @ Sat, 03 Apr 2021 07:11:46: 42000000 INFO @ Sat, 03 Apr 2021 07:11:47: 33000000 INFO @ Sat, 03 Apr 2021 07:11:47: 35000000 INFO @ Sat, 03 Apr 2021 07:11:53: 43000000 INFO @ Sat, 03 Apr 2021 07:11:55: 34000000 INFO @ Sat, 03 Apr 2021 07:11:56: 36000000 INFO @ Sat, 03 Apr 2021 07:12:01: 44000000 INFO @ Sat, 03 Apr 2021 07:12:03: 35000000 INFO @ Sat, 03 Apr 2021 07:12:05: 37000000 INFO @ Sat, 03 Apr 2021 07:12:09: 45000000 INFO @ Sat, 03 Apr 2021 07:12:12: 36000000 INFO @ Sat, 03 Apr 2021 07:12:14: 38000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 07:12:16: 46000000 INFO @ Sat, 03 Apr 2021 07:12:20: 37000000 INFO @ Sat, 03 Apr 2021 07:12:20: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 07:12:20: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 07:12:20: #1 total tags in treatment: 18373499 INFO @ Sat, 03 Apr 2021 07:12:20: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:12:20: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:12:21: #1 tags after filtering in treatment: 12989513 INFO @ Sat, 03 Apr 2021 07:12:21: #1 Redundant rate of treatment: 0.29 INFO @ Sat, 03 Apr 2021 07:12:21: #1 finished! INFO @ Sat, 03 Apr 2021 07:12:21: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:12:21: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:12:22: #2 number of paired peaks: 262 WARNING @ Sat, 03 Apr 2021 07:12:22: Fewer paired peaks (262) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 262 pairs to build model! INFO @ Sat, 03 Apr 2021 07:12:22: start model_add_line... INFO @ Sat, 03 Apr 2021 07:12:22: start X-correlation... INFO @ Sat, 03 Apr 2021 07:12:22: end of X-cor INFO @ Sat, 03 Apr 2021 07:12:22: #2 finished! INFO @ Sat, 03 Apr 2021 07:12:22: #2 predicted fragment length is 142 bps INFO @ Sat, 03 Apr 2021 07:12:22: #2 alternative fragment length(s) may be 4,116,136,142 bps INFO @ Sat, 03 Apr 2021 07:12:22: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.05_model.r WARNING @ Sat, 03 Apr 2021 07:12:22: #2 Since the d (142) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:12:22: #2 You may need to consider one of the other alternative d(s): 4,116,136,142 WARNING @ Sat, 03 Apr 2021 07:12:22: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:12:22: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:12:22: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:12:22: 39000000 INFO @ Sat, 03 Apr 2021 07:12:28: 38000000 INFO @ Sat, 03 Apr 2021 07:12:30: 40000000 INFO @ Sat, 03 Apr 2021 07:12:36: 39000000 INFO @ Sat, 03 Apr 2021 07:12:39: 41000000 INFO @ Sat, 03 Apr 2021 07:12:44: 40000000 INFO @ Sat, 03 Apr 2021 07:12:47: 42000000 INFO @ Sat, 03 Apr 2021 07:12:53: 41000000 INFO @ Sat, 03 Apr 2021 07:12:55: 43000000 INFO @ Sat, 03 Apr 2021 07:13:01: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:13:01: 42000000 INFO @ Sat, 03 Apr 2021 07:13:03: 44000000 INFO @ Sat, 03 Apr 2021 07:13:09: 43000000 INFO @ Sat, 03 Apr 2021 07:13:12: 45000000 INFO @ Sat, 03 Apr 2021 07:13:18: 44000000 INFO @ Sat, 03 Apr 2021 07:13:21: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.05_peaks.xls INFO @ Sat, 03 Apr 2021 07:13:21: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:13:21: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.05_summits.bed INFO @ Sat, 03 Apr 2021 07:13:21: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (491 records, 4 fields): 35 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:13:22: 46000000 INFO @ Sat, 03 Apr 2021 07:13:26: 45000000 INFO @ Sat, 03 Apr 2021 07:13:27: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 07:13:27: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 07:13:27: #1 total tags in treatment: 18373499 INFO @ Sat, 03 Apr 2021 07:13:27: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:13:27: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:13:27: #1 tags after filtering in treatment: 12989513 INFO @ Sat, 03 Apr 2021 07:13:27: #1 Redundant rate of treatment: 0.29 INFO @ Sat, 03 Apr 2021 07:13:27: #1 finished! INFO @ Sat, 03 Apr 2021 07:13:27: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:13:27: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:13:29: #2 number of paired peaks: 262 WARNING @ Sat, 03 Apr 2021 07:13:29: Fewer paired peaks (262) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 262 pairs to build model! INFO @ Sat, 03 Apr 2021 07:13:29: start model_add_line... INFO @ Sat, 03 Apr 2021 07:13:29: start X-correlation... INFO @ Sat, 03 Apr 2021 07:13:29: end of X-cor INFO @ Sat, 03 Apr 2021 07:13:29: #2 finished! INFO @ Sat, 03 Apr 2021 07:13:29: #2 predicted fragment length is 142 bps INFO @ Sat, 03 Apr 2021 07:13:29: #2 alternative fragment length(s) may be 4,116,136,142 bps INFO @ Sat, 03 Apr 2021 07:13:29: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.10_model.r WARNING @ Sat, 03 Apr 2021 07:13:29: #2 Since the d (142) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:13:29: #2 You may need to consider one of the other alternative d(s): 4,116,136,142 WARNING @ Sat, 03 Apr 2021 07:13:29: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:13:29: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:13:29: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:13:33: 46000000 INFO @ Sat, 03 Apr 2021 07:13:37: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 07:13:37: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 07:13:37: #1 total tags in treatment: 18373499 INFO @ Sat, 03 Apr 2021 07:13:37: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:13:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:13:37: #1 tags after filtering in treatment: 12989513 INFO @ Sat, 03 Apr 2021 07:13:37: #1 Redundant rate of treatment: 0.29 INFO @ Sat, 03 Apr 2021 07:13:37: #1 finished! INFO @ Sat, 03 Apr 2021 07:13:37: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:13:37: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:13:38: #2 number of paired peaks: 262 WARNING @ Sat, 03 Apr 2021 07:13:38: Fewer paired peaks (262) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 262 pairs to build model! INFO @ Sat, 03 Apr 2021 07:13:38: start model_add_line... INFO @ Sat, 03 Apr 2021 07:13:38: start X-correlation... INFO @ Sat, 03 Apr 2021 07:13:38: end of X-cor INFO @ Sat, 03 Apr 2021 07:13:38: #2 finished! INFO @ Sat, 03 Apr 2021 07:13:38: #2 predicted fragment length is 142 bps INFO @ Sat, 03 Apr 2021 07:13:38: #2 alternative fragment length(s) may be 4,116,136,142 bps INFO @ Sat, 03 Apr 2021 07:13:38: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.20_model.r WARNING @ Sat, 03 Apr 2021 07:13:38: #2 Since the d (142) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:13:38: #2 You may need to consider one of the other alternative d(s): 4,116,136,142 WARNING @ Sat, 03 Apr 2021 07:13:38: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:13:38: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:13:38: #3 Pre-compute pvalue-qvalue table... BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 07:14:11: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:14:16: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:14:34: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.10_peaks.xls INFO @ Sat, 03 Apr 2021 07:14:34: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:14:34: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.10_summits.bed INFO @ Sat, 03 Apr 2021 07:14:34: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (288 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:14:35: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.20_peaks.xls INFO @ Sat, 03 Apr 2021 07:14:35: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:14:35: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX7687150/SRX7687150.20_summits.bed INFO @ Sat, 03 Apr 2021 07:14:36: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (152 records, 4 fields): 92 millis CompletedMACS2peakCalling