Job ID = 5720213 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... spots read : 39,945,355 reads read : 79,890,710 reads written : 79,890,710 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:15:40 39945355 reads; of these: 39945355 (100.00%) were paired; of these: 24326449 (60.90%) aligned concordantly 0 times 11721894 (29.34%) aligned concordantly exactly 1 time 3897012 (9.76%) aligned concordantly >1 times ---- 24326449 pairs aligned concordantly 0 times; of these: 9687010 (39.82%) aligned discordantly 1 time ---- 14639439 pairs aligned 0 times concordantly or discordantly; of these: 29278878 mates make up the pairs; of these: 25238711 (86.20%) aligned 0 times 1257445 (4.29%) aligned exactly 1 time 2782722 (9.50%) aligned >1 times 68.41% overall alignment rate Time searching: 01:15:40 Overall time: 01:15:40 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 4004640 / 24901905 = 0.1608 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 00:24:04: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 00:24:04: #1 read tag files... INFO @ Thu, 16 Apr 2020 00:24:04: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 00:24:10: 1000000 INFO @ Thu, 16 Apr 2020 00:24:17: 2000000 INFO @ Thu, 16 Apr 2020 00:24:23: 3000000 INFO @ Thu, 16 Apr 2020 00:24:29: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 00:24:34: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 00:24:34: #1 read tag files... INFO @ Thu, 16 Apr 2020 00:24:34: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 00:24:35: 5000000 INFO @ Thu, 16 Apr 2020 00:24:40: 1000000 INFO @ Thu, 16 Apr 2020 00:24:42: 6000000 INFO @ Thu, 16 Apr 2020 00:24:47: 2000000 INFO @ Thu, 16 Apr 2020 00:24:48: 7000000 INFO @ Thu, 16 Apr 2020 00:24:53: 3000000 INFO @ Thu, 16 Apr 2020 00:24:54: 8000000 INFO @ Thu, 16 Apr 2020 00:25:00: 4000000 INFO @ Thu, 16 Apr 2020 00:25:00: 9000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 00:25:04: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 00:25:04: #1 read tag files... INFO @ Thu, 16 Apr 2020 00:25:04: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 00:25:06: 5000000 INFO @ Thu, 16 Apr 2020 00:25:06: 10000000 INFO @ Thu, 16 Apr 2020 00:25:10: 1000000 INFO @ Thu, 16 Apr 2020 00:25:12: 6000000 INFO @ Thu, 16 Apr 2020 00:25:13: 11000000 INFO @ Thu, 16 Apr 2020 00:25:17: 2000000 INFO @ Thu, 16 Apr 2020 00:25:19: 7000000 INFO @ Thu, 16 Apr 2020 00:25:20: 12000000 INFO @ Thu, 16 Apr 2020 00:25:23: 3000000 INFO @ Thu, 16 Apr 2020 00:25:25: 8000000 INFO @ Thu, 16 Apr 2020 00:25:27: 13000000 INFO @ Thu, 16 Apr 2020 00:25:30: 4000000 INFO @ Thu, 16 Apr 2020 00:25:31: 9000000 INFO @ Thu, 16 Apr 2020 00:25:34: 14000000 INFO @ Thu, 16 Apr 2020 00:25:36: 5000000 INFO @ Thu, 16 Apr 2020 00:25:37: 10000000 INFO @ Thu, 16 Apr 2020 00:25:41: 15000000 INFO @ Thu, 16 Apr 2020 00:25:42: 6000000 INFO @ Thu, 16 Apr 2020 00:25:44: 11000000 INFO @ Thu, 16 Apr 2020 00:25:47: 16000000 INFO @ Thu, 16 Apr 2020 00:25:48: 7000000 INFO @ Thu, 16 Apr 2020 00:25:51: 12000000 INFO @ Thu, 16 Apr 2020 00:25:53: 17000000 INFO @ Thu, 16 Apr 2020 00:25:55: 8000000 INFO @ Thu, 16 Apr 2020 00:25:58: 13000000 INFO @ Thu, 16 Apr 2020 00:26:00: 18000000 INFO @ Thu, 16 Apr 2020 00:26:01: 9000000 INFO @ Thu, 16 Apr 2020 00:26:05: 14000000 INFO @ Thu, 16 Apr 2020 00:26:06: 19000000 INFO @ Thu, 16 Apr 2020 00:26:07: 10000000 INFO @ Thu, 16 Apr 2020 00:26:12: 15000000 INFO @ Thu, 16 Apr 2020 00:26:12: 20000000 INFO @ Thu, 16 Apr 2020 00:26:13: 11000000 INFO @ Thu, 16 Apr 2020 00:26:18: 16000000 INFO @ Thu, 16 Apr 2020 00:26:19: 21000000 INFO @ Thu, 16 Apr 2020 00:26:20: 12000000 INFO @ Thu, 16 Apr 2020 00:26:24: 17000000 INFO @ Thu, 16 Apr 2020 00:26:25: 22000000 INFO @ Thu, 16 Apr 2020 00:26:28: 13000000 INFO @ Thu, 16 Apr 2020 00:26:31: 18000000 INFO @ Thu, 16 Apr 2020 00:26:31: 23000000 INFO @ Thu, 16 Apr 2020 00:26:35: 14000000 INFO @ Thu, 16 Apr 2020 00:26:37: 19000000 INFO @ Thu, 16 Apr 2020 00:26:37: 24000000 INFO @ Thu, 16 Apr 2020 00:26:41: 15000000 INFO @ Thu, 16 Apr 2020 00:26:43: 20000000 INFO @ Thu, 16 Apr 2020 00:26:44: 25000000 INFO @ Thu, 16 Apr 2020 00:26:48: 16000000 INFO @ Thu, 16 Apr 2020 00:26:50: 21000000 INFO @ Thu, 16 Apr 2020 00:26:50: 26000000 INFO @ Thu, 16 Apr 2020 00:26:54: 17000000 INFO @ Thu, 16 Apr 2020 00:26:56: 22000000 INFO @ Thu, 16 Apr 2020 00:26:56: 27000000 INFO @ Thu, 16 Apr 2020 00:27:00: 18000000 INFO @ Thu, 16 Apr 2020 00:27:02: 23000000 INFO @ Thu, 16 Apr 2020 00:27:02: 28000000 INFO @ Thu, 16 Apr 2020 00:27:07: 19000000 INFO @ Thu, 16 Apr 2020 00:27:08: 24000000 INFO @ Thu, 16 Apr 2020 00:27:08: 29000000 INFO @ Thu, 16 Apr 2020 00:27:13: 20000000 INFO @ Thu, 16 Apr 2020 00:27:15: 30000000 INFO @ Thu, 16 Apr 2020 00:27:15: 25000000 INFO @ Thu, 16 Apr 2020 00:27:19: 21000000 INFO @ Thu, 16 Apr 2020 00:27:21: 31000000 INFO @ Thu, 16 Apr 2020 00:27:21: 26000000 INFO @ Thu, 16 Apr 2020 00:27:26: 22000000 INFO @ Thu, 16 Apr 2020 00:27:27: 32000000 INFO @ Thu, 16 Apr 2020 00:27:27: 27000000 INFO @ Thu, 16 Apr 2020 00:27:32: 23000000 INFO @ Thu, 16 Apr 2020 00:27:33: 33000000 INFO @ Thu, 16 Apr 2020 00:27:34: 28000000 INFO @ Thu, 16 Apr 2020 00:27:38: 24000000 INFO @ Thu, 16 Apr 2020 00:27:39: 34000000 INFO @ Thu, 16 Apr 2020 00:27:40: 29000000 INFO @ Thu, 16 Apr 2020 00:27:45: 25000000 INFO @ Thu, 16 Apr 2020 00:27:45: 35000000 INFO @ Thu, 16 Apr 2020 00:27:46: 30000000 INFO @ Thu, 16 Apr 2020 00:27:51: 26000000 INFO @ Thu, 16 Apr 2020 00:27:51: 36000000 INFO @ Thu, 16 Apr 2020 00:27:52: 31000000 INFO @ Thu, 16 Apr 2020 00:27:57: 27000000 INFO @ Thu, 16 Apr 2020 00:27:58: 37000000 INFO @ Thu, 16 Apr 2020 00:27:58: 32000000 INFO @ Thu, 16 Apr 2020 00:28:03: 28000000 INFO @ Thu, 16 Apr 2020 00:28:04: 38000000 INFO @ Thu, 16 Apr 2020 00:28:04: 33000000 INFO @ Thu, 16 Apr 2020 00:28:10: 29000000 INFO @ Thu, 16 Apr 2020 00:28:10: 39000000 INFO @ Thu, 16 Apr 2020 00:28:10: 34000000 INFO @ Thu, 16 Apr 2020 00:28:16: 30000000 INFO @ Thu, 16 Apr 2020 00:28:16: 40000000 INFO @ Thu, 16 Apr 2020 00:28:16: 35000000 INFO @ Thu, 16 Apr 2020 00:28:22: 41000000 INFO @ Thu, 16 Apr 2020 00:28:22: 31000000 INFO @ Thu, 16 Apr 2020 00:28:23: 36000000 INFO @ Thu, 16 Apr 2020 00:28:28: 42000000 INFO @ Thu, 16 Apr 2020 00:28:28: 32000000 INFO @ Thu, 16 Apr 2020 00:28:29: 37000000 INFO @ Thu, 16 Apr 2020 00:28:34: 43000000 INFO @ Thu, 16 Apr 2020 00:28:34: 33000000 INFO @ Thu, 16 Apr 2020 00:28:35: 38000000 INFO @ Thu, 16 Apr 2020 00:28:40: 44000000 INFO @ Thu, 16 Apr 2020 00:28:40: 34000000 INFO @ Thu, 16 Apr 2020 00:28:41: 39000000 INFO @ Thu, 16 Apr 2020 00:28:46: 45000000 INFO @ Thu, 16 Apr 2020 00:28:47: 35000000 INFO @ Thu, 16 Apr 2020 00:28:47: 40000000 INFO @ Thu, 16 Apr 2020 00:28:53: 36000000 INFO @ Thu, 16 Apr 2020 00:28:53: 46000000 INFO @ Thu, 16 Apr 2020 00:28:53: 41000000 INFO @ Thu, 16 Apr 2020 00:28:57: #1 tag size is determined as 150 bps INFO @ Thu, 16 Apr 2020 00:28:57: #1 tag size = 150 INFO @ Thu, 16 Apr 2020 00:28:57: #1 total tags in treatment: 12842876 INFO @ Thu, 16 Apr 2020 00:28:57: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 00:28:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 00:28:57: #1 tags after filtering in treatment: 10123429 INFO @ Thu, 16 Apr 2020 00:28:57: #1 Redundant rate of treatment: 0.21 INFO @ Thu, 16 Apr 2020 00:28:57: #1 finished! INFO @ Thu, 16 Apr 2020 00:28:57: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 00:28:57: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 00:28:58: #2 number of paired peaks: 391 WARNING @ Thu, 16 Apr 2020 00:28:58: Fewer paired peaks (391) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 391 pairs to build model! INFO @ Thu, 16 Apr 2020 00:28:58: start model_add_line... INFO @ Thu, 16 Apr 2020 00:28:58: start X-correlation... INFO @ Thu, 16 Apr 2020 00:28:58: end of X-cor INFO @ Thu, 16 Apr 2020 00:28:58: #2 finished! INFO @ Thu, 16 Apr 2020 00:28:58: #2 predicted fragment length is 213 bps INFO @ Thu, 16 Apr 2020 00:28:58: #2 alternative fragment length(s) may be 213 bps INFO @ Thu, 16 Apr 2020 00:28:58: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.05_model.r WARNING @ Thu, 16 Apr 2020 00:28:58: #2 Since the d (213) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Thu, 16 Apr 2020 00:28:58: #2 You may need to consider one of the other alternative d(s): 213 WARNING @ Thu, 16 Apr 2020 00:28:58: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Thu, 16 Apr 2020 00:28:58: #3 Call peaks... INFO @ Thu, 16 Apr 2020 00:28:58: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 16 Apr 2020 00:28:59: 37000000 INFO @ Thu, 16 Apr 2020 00:28:59: 42000000 INFO @ Thu, 16 Apr 2020 00:29:05: 38000000 INFO @ Thu, 16 Apr 2020 00:29:05: 43000000 INFO @ Thu, 16 Apr 2020 00:29:11: 39000000 INFO @ Thu, 16 Apr 2020 00:29:11: 44000000 INFO @ Thu, 16 Apr 2020 00:29:17: 40000000 INFO @ Thu, 16 Apr 2020 00:29:17: 45000000 INFO @ Thu, 16 Apr 2020 00:29:22: #3 Call peaks for each chromosome... INFO @ Thu, 16 Apr 2020 00:29:23: 41000000 INFO @ Thu, 16 Apr 2020 00:29:24: 46000000 INFO @ Thu, 16 Apr 2020 00:29:28: #1 tag size is determined as 150 bps INFO @ Thu, 16 Apr 2020 00:29:28: #1 tag size = 150 INFO @ Thu, 16 Apr 2020 00:29:28: #1 total tags in treatment: 12842876 INFO @ Thu, 16 Apr 2020 00:29:28: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 00:29:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 00:29:28: #1 tags after filtering in treatment: 10123429 INFO @ Thu, 16 Apr 2020 00:29:28: #1 Redundant rate of treatment: 0.21 INFO @ Thu, 16 Apr 2020 00:29:28: #1 finished! INFO @ Thu, 16 Apr 2020 00:29:28: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 00:29:28: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 00:29:28: #2 number of paired peaks: 391 WARNING @ Thu, 16 Apr 2020 00:29:28: Fewer paired peaks (391) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 391 pairs to build model! INFO @ Thu, 16 Apr 2020 00:29:28: start model_add_line... INFO @ Thu, 16 Apr 2020 00:29:28: start X-correlation... INFO @ Thu, 16 Apr 2020 00:29:28: end of X-cor INFO @ Thu, 16 Apr 2020 00:29:28: #2 finished! INFO @ Thu, 16 Apr 2020 00:29:28: #2 predicted fragment length is 213 bps INFO @ Thu, 16 Apr 2020 00:29:28: #2 alternative fragment length(s) may be 213 bps INFO @ Thu, 16 Apr 2020 00:29:28: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.10_model.r WARNING @ Thu, 16 Apr 2020 00:29:29: #2 Since the d (213) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Thu, 16 Apr 2020 00:29:29: #2 You may need to consider one of the other alternative d(s): 213 WARNING @ Thu, 16 Apr 2020 00:29:29: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Thu, 16 Apr 2020 00:29:29: #3 Call peaks... INFO @ Thu, 16 Apr 2020 00:29:29: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 16 Apr 2020 00:29:29: 42000000 INFO @ Thu, 16 Apr 2020 00:29:33: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.05_peaks.xls INFO @ Thu, 16 Apr 2020 00:29:33: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.05_peaks.narrowPeak INFO @ Thu, 16 Apr 2020 00:29:33: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.05_summits.bed INFO @ Thu, 16 Apr 2020 00:29:33: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (989 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Thu, 16 Apr 2020 00:29:35: 43000000 INFO @ Thu, 16 Apr 2020 00:29:41: 44000000 INFO @ Thu, 16 Apr 2020 00:29:47: 45000000 INFO @ Thu, 16 Apr 2020 00:29:52: #3 Call peaks for each chromosome... INFO @ Thu, 16 Apr 2020 00:29:53: 46000000 INFO @ Thu, 16 Apr 2020 00:29:57: #1 tag size is determined as 150 bps INFO @ Thu, 16 Apr 2020 00:29:57: #1 tag size = 150 INFO @ Thu, 16 Apr 2020 00:29:57: #1 total tags in treatment: 12842876 INFO @ Thu, 16 Apr 2020 00:29:57: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 00:29:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 00:29:57: #1 tags after filtering in treatment: 10123429 INFO @ Thu, 16 Apr 2020 00:29:57: #1 Redundant rate of treatment: 0.21 INFO @ Thu, 16 Apr 2020 00:29:57: #1 finished! INFO @ Thu, 16 Apr 2020 00:29:57: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 00:29:57: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 00:29:58: #2 number of paired peaks: 391 WARNING @ Thu, 16 Apr 2020 00:29:58: Fewer paired peaks (391) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 391 pairs to build model! INFO @ Thu, 16 Apr 2020 00:29:58: start model_add_line... INFO @ Thu, 16 Apr 2020 00:29:58: start X-correlation... INFO @ Thu, 16 Apr 2020 00:29:58: end of X-cor INFO @ Thu, 16 Apr 2020 00:29:58: #2 finished! INFO @ Thu, 16 Apr 2020 00:29:58: #2 predicted fragment length is 213 bps INFO @ Thu, 16 Apr 2020 00:29:58: #2 alternative fragment length(s) may be 213 bps INFO @ Thu, 16 Apr 2020 00:29:58: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.20_model.r WARNING @ Thu, 16 Apr 2020 00:29:58: #2 Since the d (213) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Thu, 16 Apr 2020 00:29:58: #2 You may need to consider one of the other alternative d(s): 213 WARNING @ Thu, 16 Apr 2020 00:29:58: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Thu, 16 Apr 2020 00:29:58: #3 Call peaks... INFO @ Thu, 16 Apr 2020 00:29:58: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 16 Apr 2020 00:30:03: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.10_peaks.xls INFO @ Thu, 16 Apr 2020 00:30:03: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.10_peaks.narrowPeak INFO @ Thu, 16 Apr 2020 00:30:03: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.10_summits.bed INFO @ Thu, 16 Apr 2020 00:30:03: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (433 records, 4 fields): 1 millis CompletedMACS2peakCalling INFO @ Thu, 16 Apr 2020 00:30:21: #3 Call peaks for each chromosome... INFO @ Thu, 16 Apr 2020 00:30:32: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.20_peaks.xls INFO @ Thu, 16 Apr 2020 00:30:32: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.20_peaks.narrowPeak INFO @ Thu, 16 Apr 2020 00:30:32: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX6619586/SRX6619586.20_summits.bed INFO @ Thu, 16 Apr 2020 00:30:32: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (236 records, 4 fields): 1 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。