Job ID = 10714491 sra ファイルのダウンロード中... Completed: 3151042K bytes transferred in 43 seconds (599960K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 44324711 spots for /home/okishinya/chipatlas/results/ce10/SRX4085408/SRR7167437.sra Written 44324711 spots for /home/okishinya/chipatlas/results/ce10/SRX4085408/SRR7167437.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:52:09 44324711 reads; of these: 44324711 (100.00%) were paired; of these: 2164077 (4.88%) aligned concordantly 0 times 34586373 (78.03%) aligned concordantly exactly 1 time 7574261 (17.09%) aligned concordantly >1 times ---- 2164077 pairs aligned concordantly 0 times; of these: 762127 (35.22%) aligned discordantly 1 time ---- 1401950 pairs aligned 0 times concordantly or discordantly; of these: 2803900 mates make up the pairs; of these: 1478291 (52.72%) aligned 0 times 831615 (29.66%) aligned exactly 1 time 493994 (17.62%) aligned >1 times 98.33% overall alignment rate Time searching: 00:52:09 Overall time: 00:52:09 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 2760267 / 42571561 = 0.0648 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 03 Jun 2018 14:10:53: # Command line: callpeak -t SRX4085408.bam -f BAM -g ce -n SRX4085408.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX4085408.05 # format = BAM # ChIP-seq file = ['SRX4085408.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:10:53: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:10:53: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:10:53: # Command line: callpeak -t SRX4085408.bam -f BAM -g ce -n SRX4085408.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX4085408.10 # format = BAM # ChIP-seq file = ['SRX4085408.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:10:53: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:10:53: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:10:53: # Command line: callpeak -t SRX4085408.bam -f BAM -g ce -n SRX4085408.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX4085408.20 # format = BAM # ChIP-seq file = ['SRX4085408.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:10:53: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:10:53: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:11:00: 1000000 INFO @ Sun, 03 Jun 2018 14:11:00: 1000000 INFO @ Sun, 03 Jun 2018 14:11:00: 1000000 INFO @ Sun, 03 Jun 2018 14:11:06: 2000000 INFO @ Sun, 03 Jun 2018 14:11:07: 2000000 INFO @ Sun, 03 Jun 2018 14:11:07: 2000000 INFO @ Sun, 03 Jun 2018 14:11:13: 3000000 INFO @ Sun, 03 Jun 2018 14:11:13: 3000000 INFO @ Sun, 03 Jun 2018 14:11:13: 3000000 INFO @ Sun, 03 Jun 2018 14:11:19: 4000000 INFO @ Sun, 03 Jun 2018 14:11:20: 4000000 INFO @ Sun, 03 Jun 2018 14:11:20: 4000000 INFO @ Sun, 03 Jun 2018 14:11:25: 5000000 INFO @ Sun, 03 Jun 2018 14:11:26: 5000000 INFO @ Sun, 03 Jun 2018 14:11:27: 5000000 INFO @ Sun, 03 Jun 2018 14:11:32: 6000000 INFO @ Sun, 03 Jun 2018 14:11:33: 6000000 INFO @ Sun, 03 Jun 2018 14:11:33: 6000000 INFO @ Sun, 03 Jun 2018 14:11:38: 7000000 INFO @ Sun, 03 Jun 2018 14:11:40: 7000000 INFO @ Sun, 03 Jun 2018 14:11:40: 7000000 INFO @ Sun, 03 Jun 2018 14:11:44: 8000000 INFO @ Sun, 03 Jun 2018 14:11:47: 8000000 INFO @ Sun, 03 Jun 2018 14:11:47: 8000000 INFO @ Sun, 03 Jun 2018 14:11:50: 9000000 INFO @ Sun, 03 Jun 2018 14:11:53: 9000000 INFO @ Sun, 03 Jun 2018 14:11:54: 9000000 INFO @ Sun, 03 Jun 2018 14:11:57: 10000000 INFO @ Sun, 03 Jun 2018 14:11:59: 10000000 INFO @ Sun, 03 Jun 2018 14:12:01: 10000000 INFO @ Sun, 03 Jun 2018 14:12:04: 11000000 INFO @ Sun, 03 Jun 2018 14:12:06: 11000000 INFO @ Sun, 03 Jun 2018 14:12:08: 11000000 INFO @ Sun, 03 Jun 2018 14:12:11: 12000000 INFO @ Sun, 03 Jun 2018 14:12:13: 12000000 INFO @ Sun, 03 Jun 2018 14:12:14: 12000000 INFO @ Sun, 03 Jun 2018 14:12:18: 13000000 INFO @ Sun, 03 Jun 2018 14:12:20: 13000000 INFO @ Sun, 03 Jun 2018 14:12:20: 13000000 INFO @ Sun, 03 Jun 2018 14:12:25: 14000000 INFO @ Sun, 03 Jun 2018 14:12:27: 14000000 INFO @ Sun, 03 Jun 2018 14:12:27: 14000000 INFO @ Sun, 03 Jun 2018 14:12:32: 15000000 INFO @ Sun, 03 Jun 2018 14:12:33: 15000000 INFO @ Sun, 03 Jun 2018 14:12:34: 15000000 INFO @ Sun, 03 Jun 2018 14:12:39: 16000000 INFO @ Sun, 03 Jun 2018 14:12:40: 16000000 INFO @ Sun, 03 Jun 2018 14:12:41: 16000000 INFO @ Sun, 03 Jun 2018 14:12:45: 17000000 INFO @ Sun, 03 Jun 2018 14:12:47: 17000000 INFO @ Sun, 03 Jun 2018 14:12:47: 17000000 INFO @ Sun, 03 Jun 2018 14:12:52: 18000000 INFO @ Sun, 03 Jun 2018 14:12:53: 18000000 INFO @ Sun, 03 Jun 2018 14:12:54: 18000000 INFO @ Sun, 03 Jun 2018 14:12:59: 19000000 INFO @ Sun, 03 Jun 2018 14:13:00: 19000000 INFO @ Sun, 03 Jun 2018 14:13:01: 19000000 INFO @ Sun, 03 Jun 2018 14:13:05: 20000000 INFO @ Sun, 03 Jun 2018 14:13:06: 20000000 INFO @ Sun, 03 Jun 2018 14:13:08: 20000000 INFO @ Sun, 03 Jun 2018 14:13:12: 21000000 INFO @ Sun, 03 Jun 2018 14:13:12: 21000000 INFO @ Sun, 03 Jun 2018 14:13:15: 21000000 INFO @ Sun, 03 Jun 2018 14:13:18: 22000000 INFO @ Sun, 03 Jun 2018 14:13:19: 22000000 INFO @ Sun, 03 Jun 2018 14:13:22: 22000000 INFO @ Sun, 03 Jun 2018 14:13:25: 23000000 INFO @ Sun, 03 Jun 2018 14:13:25: 23000000 INFO @ Sun, 03 Jun 2018 14:13:29: 23000000 INFO @ Sun, 03 Jun 2018 14:13:31: 24000000 INFO @ Sun, 03 Jun 2018 14:13:32: 24000000 INFO @ Sun, 03 Jun 2018 14:13:35: 24000000 INFO @ Sun, 03 Jun 2018 14:13:37: 25000000 INFO @ Sun, 03 Jun 2018 14:13:38: 25000000 INFO @ Sun, 03 Jun 2018 14:13:42: 25000000 INFO @ Sun, 03 Jun 2018 14:13:44: 26000000 INFO @ Sun, 03 Jun 2018 14:13:45: 26000000 INFO @ Sun, 03 Jun 2018 14:13:49: 26000000 INFO @ Sun, 03 Jun 2018 14:13:50: 27000000 INFO @ Sun, 03 Jun 2018 14:13:51: 27000000 INFO @ Sun, 03 Jun 2018 14:13:56: 27000000 INFO @ Sun, 03 Jun 2018 14:13:56: 28000000 INFO @ Sun, 03 Jun 2018 14:13:58: 28000000 INFO @ Sun, 03 Jun 2018 14:14:03: 29000000 INFO @ Sun, 03 Jun 2018 14:14:03: 28000000 INFO @ Sun, 03 Jun 2018 14:14:05: 29000000 INFO @ Sun, 03 Jun 2018 14:14:09: 30000000 INFO @ Sun, 03 Jun 2018 14:14:10: 29000000 INFO @ Sun, 03 Jun 2018 14:14:11: 30000000 INFO @ Sun, 03 Jun 2018 14:14:15: 31000000 INFO @ Sun, 03 Jun 2018 14:14:17: 30000000 INFO @ Sun, 03 Jun 2018 14:14:18: 31000000 INFO @ Sun, 03 Jun 2018 14:14:22: 32000000 INFO @ Sun, 03 Jun 2018 14:14:24: 31000000 INFO @ Sun, 03 Jun 2018 14:14:24: 32000000 INFO @ Sun, 03 Jun 2018 14:14:29: 33000000 INFO @ Sun, 03 Jun 2018 14:14:30: 33000000 INFO @ Sun, 03 Jun 2018 14:14:31: 32000000 INFO @ Sun, 03 Jun 2018 14:14:36: 34000000 INFO @ Sun, 03 Jun 2018 14:14:37: 34000000 INFO @ Sun, 03 Jun 2018 14:14:38: 33000000 INFO @ Sun, 03 Jun 2018 14:14:43: 35000000 INFO @ Sun, 03 Jun 2018 14:14:43: 35000000 INFO @ Sun, 03 Jun 2018 14:14:45: 34000000 INFO @ Sun, 03 Jun 2018 14:14:50: 36000000 INFO @ Sun, 03 Jun 2018 14:14:50: 36000000 INFO @ Sun, 03 Jun 2018 14:14:51: 35000000 INFO @ Sun, 03 Jun 2018 14:14:56: 37000000 INFO @ Sun, 03 Jun 2018 14:14:57: 37000000 INFO @ Sun, 03 Jun 2018 14:14:58: 36000000 INFO @ Sun, 03 Jun 2018 14:15:03: 38000000 INFO @ Sun, 03 Jun 2018 14:15:03: 38000000 INFO @ Sun, 03 Jun 2018 14:15:04: 37000000 INFO @ Sun, 03 Jun 2018 14:15:10: 39000000 INFO @ Sun, 03 Jun 2018 14:15:10: 39000000 INFO @ Sun, 03 Jun 2018 14:15:11: 38000000 INFO @ Sun, 03 Jun 2018 14:15:16: 40000000 INFO @ Sun, 03 Jun 2018 14:15:17: 40000000 INFO @ Sun, 03 Jun 2018 14:15:17: 39000000 INFO @ Sun, 03 Jun 2018 14:15:23: 41000000 INFO @ Sun, 03 Jun 2018 14:15:23: 41000000 INFO @ Sun, 03 Jun 2018 14:15:23: 40000000 INFO @ Sun, 03 Jun 2018 14:15:30: 42000000 INFO @ Sun, 03 Jun 2018 14:15:30: 42000000 INFO @ Sun, 03 Jun 2018 14:15:31: 41000000 INFO @ Sun, 03 Jun 2018 14:15:36: 43000000 INFO @ Sun, 03 Jun 2018 14:15:37: 43000000 INFO @ Sun, 03 Jun 2018 14:15:38: 42000000 INFO @ Sun, 03 Jun 2018 14:15:42: 44000000 INFO @ Sun, 03 Jun 2018 14:15:44: 44000000 INFO @ Sun, 03 Jun 2018 14:15:45: 43000000 INFO @ Sun, 03 Jun 2018 14:15:48: 45000000 INFO @ Sun, 03 Jun 2018 14:15:51: 45000000 INFO @ Sun, 03 Jun 2018 14:15:52: 44000000 INFO @ Sun, 03 Jun 2018 14:15:55: 46000000 INFO @ Sun, 03 Jun 2018 14:15:58: 46000000 INFO @ Sun, 03 Jun 2018 14:15:59: 45000000 INFO @ Sun, 03 Jun 2018 14:16:01: 47000000 INFO @ Sun, 03 Jun 2018 14:16:05: 47000000 INFO @ Sun, 03 Jun 2018 14:16:05: 46000000 INFO @ Sun, 03 Jun 2018 14:16:08: 48000000 INFO @ Sun, 03 Jun 2018 14:16:11: 48000000 INFO @ Sun, 03 Jun 2018 14:16:12: 47000000 INFO @ Sun, 03 Jun 2018 14:16:15: 49000000 INFO @ Sun, 03 Jun 2018 14:16:18: 48000000 INFO @ Sun, 03 Jun 2018 14:16:18: 49000000 INFO @ Sun, 03 Jun 2018 14:16:21: 50000000 INFO @ Sun, 03 Jun 2018 14:16:24: 49000000 INFO @ Sun, 03 Jun 2018 14:16:25: 50000000 INFO @ Sun, 03 Jun 2018 14:16:28: 51000000 INFO @ Sun, 03 Jun 2018 14:16:31: 50000000 INFO @ Sun, 03 Jun 2018 14:16:32: 51000000 INFO @ Sun, 03 Jun 2018 14:16:34: 52000000 INFO @ Sun, 03 Jun 2018 14:16:38: 51000000 INFO @ Sun, 03 Jun 2018 14:16:39: 52000000 INFO @ Sun, 03 Jun 2018 14:16:41: 53000000 INFO @ Sun, 03 Jun 2018 14:16:45: 52000000 INFO @ Sun, 03 Jun 2018 14:16:45: 53000000 INFO @ Sun, 03 Jun 2018 14:16:47: 54000000 INFO @ Sun, 03 Jun 2018 14:16:51: 54000000 INFO @ Sun, 03 Jun 2018 14:16:52: 53000000 INFO @ Sun, 03 Jun 2018 14:16:54: 55000000 INFO @ Sun, 03 Jun 2018 14:16:58: 55000000 INFO @ Sun, 03 Jun 2018 14:16:59: 54000000 INFO @ Sun, 03 Jun 2018 14:17:01: 56000000 INFO @ Sun, 03 Jun 2018 14:17:04: 56000000 INFO @ Sun, 03 Jun 2018 14:17:06: 55000000 INFO @ Sun, 03 Jun 2018 14:17:08: 57000000 INFO @ Sun, 03 Jun 2018 14:17:10: 57000000 INFO @ Sun, 03 Jun 2018 14:17:13: 56000000 INFO @ Sun, 03 Jun 2018 14:17:14: 58000000 INFO @ Sun, 03 Jun 2018 14:17:17: 58000000 INFO @ Sun, 03 Jun 2018 14:17:20: 57000000 INFO @ Sun, 03 Jun 2018 14:17:21: 59000000 INFO @ Sun, 03 Jun 2018 14:17:23: 59000000 INFO @ Sun, 03 Jun 2018 14:17:27: 58000000 INFO @ Sun, 03 Jun 2018 14:17:28: 60000000 INFO @ Sun, 03 Jun 2018 14:17:29: 60000000 INFO @ Sun, 03 Jun 2018 14:17:34: 59000000 INFO @ Sun, 03 Jun 2018 14:17:35: 61000000 INFO @ Sun, 03 Jun 2018 14:17:35: 61000000 INFO @ Sun, 03 Jun 2018 14:17:41: 60000000 INFO @ Sun, 03 Jun 2018 14:17:42: 62000000 INFO @ Sun, 03 Jun 2018 14:17:42: 62000000 INFO @ Sun, 03 Jun 2018 14:17:48: 63000000 INFO @ Sun, 03 Jun 2018 14:17:48: 63000000 INFO @ Sun, 03 Jun 2018 14:17:48: 61000000 INFO @ Sun, 03 Jun 2018 14:17:54: 64000000 INFO @ Sun, 03 Jun 2018 14:17:55: 64000000 INFO @ Sun, 03 Jun 2018 14:17:55: 62000000 INFO @ Sun, 03 Jun 2018 14:18:00: 65000000 INFO @ Sun, 03 Jun 2018 14:18:02: 65000000 INFO @ Sun, 03 Jun 2018 14:18:03: 63000000 INFO @ Sun, 03 Jun 2018 14:18:07: 66000000 INFO @ Sun, 03 Jun 2018 14:18:09: 66000000 INFO @ Sun, 03 Jun 2018 14:18:10: 64000000 INFO @ Sun, 03 Jun 2018 14:18:14: 67000000 INFO @ Sun, 03 Jun 2018 14:18:16: 67000000 INFO @ Sun, 03 Jun 2018 14:18:17: 65000000 INFO @ Sun, 03 Jun 2018 14:18:20: 68000000 INFO @ Sun, 03 Jun 2018 14:18:23: 68000000 INFO @ Sun, 03 Jun 2018 14:18:24: 66000000 INFO @ Sun, 03 Jun 2018 14:18:26: 69000000 INFO @ Sun, 03 Jun 2018 14:18:29: 69000000 INFO @ Sun, 03 Jun 2018 14:18:31: 67000000 INFO @ Sun, 03 Jun 2018 14:18:32: 70000000 INFO @ Sun, 03 Jun 2018 14:18:36: 70000000 INFO @ Sun, 03 Jun 2018 14:18:38: 68000000 INFO @ Sun, 03 Jun 2018 14:18:39: 71000000 INFO @ Sun, 03 Jun 2018 14:18:43: 71000000 INFO @ Sun, 03 Jun 2018 14:18:45: 72000000 INFO @ Sun, 03 Jun 2018 14:18:45: 69000000 INFO @ Sun, 03 Jun 2018 14:18:50: 72000000 INFO @ Sun, 03 Jun 2018 14:18:51: 73000000 INFO @ Sun, 03 Jun 2018 14:18:52: 70000000 INFO @ Sun, 03 Jun 2018 14:18:57: 73000000 INFO @ Sun, 03 Jun 2018 14:18:57: 74000000 INFO @ Sun, 03 Jun 2018 14:19:00: 71000000 INFO @ Sun, 03 Jun 2018 14:19:03: 74000000 INFO @ Sun, 03 Jun 2018 14:19:04: 75000000 INFO @ Sun, 03 Jun 2018 14:19:07: 72000000 INFO @ Sun, 03 Jun 2018 14:19:10: 76000000 INFO @ Sun, 03 Jun 2018 14:19:10: 75000000 INFO @ Sun, 03 Jun 2018 14:19:14: 73000000 INFO @ Sun, 03 Jun 2018 14:19:16: 77000000 INFO @ Sun, 03 Jun 2018 14:19:17: 76000000 INFO @ Sun, 03 Jun 2018 14:19:21: 74000000 INFO @ Sun, 03 Jun 2018 14:19:23: 78000000 INFO @ Sun, 03 Jun 2018 14:19:24: 77000000 INFO @ Sun, 03 Jun 2018 14:19:28: 75000000 INFO @ Sun, 03 Jun 2018 14:19:29: 79000000 INFO @ Sun, 03 Jun 2018 14:19:31: 78000000 INFO @ Sun, 03 Jun 2018 14:19:35: 76000000 INFO @ Sun, 03 Jun 2018 14:19:35: 80000000 INFO @ Sun, 03 Jun 2018 14:19:37: 79000000 INFO @ Sun, 03 Jun 2018 14:19:42: 81000000 INFO @ Sun, 03 Jun 2018 14:19:42: 77000000 INFO @ Sun, 03 Jun 2018 14:19:44: 80000000 INFO @ Sun, 03 Jun 2018 14:19:46: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 14:19:46: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 14:19:46: #1 total tags in treatment: 39413854 INFO @ Sun, 03 Jun 2018 14:19:46: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 14:19:46: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 14:19:47: #1 tags after filtering in treatment: 30533542 INFO @ Sun, 03 Jun 2018 14:19:47: #1 Redundant rate of treatment: 0.23 INFO @ Sun, 03 Jun 2018 14:19:47: #1 finished! INFO @ Sun, 03 Jun 2018 14:19:47: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 14:19:47: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 14:19:49: #2 number of paired peaks: 50 WARNING @ Sun, 03 Jun 2018 14:19:49: Too few paired peaks (50) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 14:19:49: Process for pairing-model is terminated! cat: SRX4085408.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085408.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085408.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085408.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 14:19:49: 78000000 INFO @ Sun, 03 Jun 2018 14:19:51: 81000000 INFO @ Sun, 03 Jun 2018 14:19:56: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 14:19:56: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 14:19:56: #1 total tags in treatment: 39413854 INFO @ Sun, 03 Jun 2018 14:19:56: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 14:19:56: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 14:19:56: 79000000 INFO @ Sun, 03 Jun 2018 14:19:56: #1 tags after filtering in treatment: 30533542 INFO @ Sun, 03 Jun 2018 14:19:56: #1 Redundant rate of treatment: 0.23 INFO @ Sun, 03 Jun 2018 14:19:56: #1 finished! INFO @ Sun, 03 Jun 2018 14:19:56: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 14:19:56: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 14:19:58: #2 number of paired peaks: 50 WARNING @ Sun, 03 Jun 2018 14:19:58: Too few paired peaks (50) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 14:19:58: Process for pairing-model is terminated! cat: SRX4085408.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085408.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085408.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085408.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 14:20:02: 80000000 INFO @ Sun, 03 Jun 2018 14:20:08: 81000000 INFO @ Sun, 03 Jun 2018 14:20:13: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 14:20:13: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 14:20:13: #1 total tags in treatment: 39413854 INFO @ Sun, 03 Jun 2018 14:20:13: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 14:20:13: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 14:20:14: #1 tags after filtering in treatment: 30533542 INFO @ Sun, 03 Jun 2018 14:20:14: #1 Redundant rate of treatment: 0.23 INFO @ Sun, 03 Jun 2018 14:20:14: #1 finished! INFO @ Sun, 03 Jun 2018 14:20:14: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 14:20:14: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 14:20:16: #2 number of paired peaks: 50 WARNING @ Sun, 03 Jun 2018 14:20:16: Too few paired peaks (50) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 14:20:16: Process for pairing-model is terminated! cat: SRX4085408.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085408.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085408.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085408.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。