Job ID = 6497390 SRX = SRX4085396 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-25T21:40:53 prefetch.2.10.7: 1) Downloading 'SRR7167425'... 2020-06-25T21:40:53 prefetch.2.10.7: Downloading via HTTPS... 2020-06-25T21:49:26 prefetch.2.10.7: HTTPS download succeed 2020-06-25T21:49:26 prefetch.2.10.7: 1) 'SRR7167425' was downloaded successfully Read 37815683 spots for SRR7167425/SRR7167425.sra Written 37815683 spots for SRR7167425/SRR7167425.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:30:03 37815683 reads; of these: 37815683 (100.00%) were paired; of these: 2148769 (5.68%) aligned concordantly 0 times 31877173 (84.30%) aligned concordantly exactly 1 time 3789741 (10.02%) aligned concordantly >1 times ---- 2148769 pairs aligned concordantly 0 times; of these: 367542 (17.10%) aligned discordantly 1 time ---- 1781227 pairs aligned 0 times concordantly or discordantly; of these: 3562454 mates make up the pairs; of these: 2671061 (74.98%) aligned 0 times 658384 (18.48%) aligned exactly 1 time 233009 (6.54%) aligned >1 times 96.47% overall alignment rate Time searching: 00:30:03 Overall time: 00:30:03 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 13390104 / 35816951 = 0.3738 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 26 Jun 2020 07:53:30: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 26 Jun 2020 07:53:30: #1 read tag files... INFO @ Fri, 26 Jun 2020 07:53:30: #1 read treatment tags... INFO @ Fri, 26 Jun 2020 07:53:38: 1000000 INFO @ Fri, 26 Jun 2020 07:53:46: 2000000 INFO @ Fri, 26 Jun 2020 07:53:54: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 26 Jun 2020 07:54:00: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 26 Jun 2020 07:54:00: #1 read tag files... INFO @ Fri, 26 Jun 2020 07:54:00: #1 read treatment tags... INFO @ Fri, 26 Jun 2020 07:54:03: 4000000 INFO @ Fri, 26 Jun 2020 07:54:08: 1000000 INFO @ Fri, 26 Jun 2020 07:54:12: 5000000 INFO @ Fri, 26 Jun 2020 07:54:16: 2000000 INFO @ Fri, 26 Jun 2020 07:54:21: 6000000 INFO @ Fri, 26 Jun 2020 07:54:23: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 26 Jun 2020 07:54:30: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 26 Jun 2020 07:54:30: #1 read tag files... INFO @ Fri, 26 Jun 2020 07:54:30: #1 read treatment tags... INFO @ Fri, 26 Jun 2020 07:54:30: 7000000 INFO @ Fri, 26 Jun 2020 07:54:31: 4000000 INFO @ Fri, 26 Jun 2020 07:54:39: 1000000 INFO @ Fri, 26 Jun 2020 07:54:40: 5000000 INFO @ Fri, 26 Jun 2020 07:54:40: 8000000 INFO @ Fri, 26 Jun 2020 07:54:48: 6000000 INFO @ Fri, 26 Jun 2020 07:54:48: 2000000 INFO @ Fri, 26 Jun 2020 07:54:49: 9000000 INFO @ Fri, 26 Jun 2020 07:54:56: 7000000 INFO @ Fri, 26 Jun 2020 07:54:57: 3000000 INFO @ Fri, 26 Jun 2020 07:54:58: 10000000 INFO @ Fri, 26 Jun 2020 07:55:04: 8000000 INFO @ Fri, 26 Jun 2020 07:55:06: 4000000 INFO @ Fri, 26 Jun 2020 07:55:08: 11000000 INFO @ Fri, 26 Jun 2020 07:55:12: 9000000 INFO @ Fri, 26 Jun 2020 07:55:15: 5000000 INFO @ Fri, 26 Jun 2020 07:55:17: 12000000 INFO @ Fri, 26 Jun 2020 07:55:20: 10000000 INFO @ Fri, 26 Jun 2020 07:55:24: 6000000 INFO @ Fri, 26 Jun 2020 07:55:26: 13000000 INFO @ Fri, 26 Jun 2020 07:55:28: 11000000 INFO @ Fri, 26 Jun 2020 07:55:34: 7000000 INFO @ Fri, 26 Jun 2020 07:55:35: 14000000 INFO @ Fri, 26 Jun 2020 07:55:36: 12000000 INFO @ Fri, 26 Jun 2020 07:55:43: 8000000 INFO @ Fri, 26 Jun 2020 07:55:44: 15000000 INFO @ Fri, 26 Jun 2020 07:55:44: 13000000 INFO @ Fri, 26 Jun 2020 07:55:52: 9000000 INFO @ Fri, 26 Jun 2020 07:55:53: 14000000 INFO @ Fri, 26 Jun 2020 07:55:54: 16000000 INFO @ Fri, 26 Jun 2020 07:56:01: 15000000 INFO @ Fri, 26 Jun 2020 07:56:02: 10000000 INFO @ Fri, 26 Jun 2020 07:56:03: 17000000 INFO @ Fri, 26 Jun 2020 07:56:09: 16000000 INFO @ Fri, 26 Jun 2020 07:56:11: 11000000 INFO @ Fri, 26 Jun 2020 07:56:12: 18000000 INFO @ Fri, 26 Jun 2020 07:56:18: 17000000 INFO @ Fri, 26 Jun 2020 07:56:20: 12000000 INFO @ Fri, 26 Jun 2020 07:56:22: 19000000 INFO @ Fri, 26 Jun 2020 07:56:26: 18000000 INFO @ Fri, 26 Jun 2020 07:56:29: 13000000 INFO @ Fri, 26 Jun 2020 07:56:31: 20000000 INFO @ Fri, 26 Jun 2020 07:56:34: 19000000 INFO @ Fri, 26 Jun 2020 07:56:39: 14000000 INFO @ Fri, 26 Jun 2020 07:56:40: 21000000 INFO @ Fri, 26 Jun 2020 07:56:43: 20000000 INFO @ Fri, 26 Jun 2020 07:56:48: 15000000 INFO @ Fri, 26 Jun 2020 07:56:49: 22000000 INFO @ Fri, 26 Jun 2020 07:56:51: 21000000 INFO @ Fri, 26 Jun 2020 07:56:58: 16000000 INFO @ Fri, 26 Jun 2020 07:56:58: 23000000 INFO @ Fri, 26 Jun 2020 07:57:00: 22000000 INFO @ Fri, 26 Jun 2020 07:57:07: 17000000 INFO @ Fri, 26 Jun 2020 07:57:08: 24000000 INFO @ Fri, 26 Jun 2020 07:57:08: 23000000 INFO @ Fri, 26 Jun 2020 07:57:16: 24000000 INFO @ Fri, 26 Jun 2020 07:57:16: 18000000 INFO @ Fri, 26 Jun 2020 07:57:17: 25000000 INFO @ Fri, 26 Jun 2020 07:57:25: 25000000 INFO @ Fri, 26 Jun 2020 07:57:26: 19000000 INFO @ Fri, 26 Jun 2020 07:57:26: 26000000 INFO @ Fri, 26 Jun 2020 07:57:33: 26000000 INFO @ Fri, 26 Jun 2020 07:57:35: 20000000 INFO @ Fri, 26 Jun 2020 07:57:35: 27000000 INFO @ Fri, 26 Jun 2020 07:57:41: 27000000 INFO @ Fri, 26 Jun 2020 07:57:44: 21000000 INFO @ Fri, 26 Jun 2020 07:57:45: 28000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 26 Jun 2020 07:57:50: 28000000 INFO @ Fri, 26 Jun 2020 07:57:53: 22000000 INFO @ Fri, 26 Jun 2020 07:57:54: 29000000 INFO @ Fri, 26 Jun 2020 07:57:58: 29000000 INFO @ Fri, 26 Jun 2020 07:58:02: 23000000 INFO @ Fri, 26 Jun 2020 07:58:03: 30000000 INFO @ Fri, 26 Jun 2020 07:58:07: 30000000 INFO @ Fri, 26 Jun 2020 07:58:12: 24000000 INFO @ Fri, 26 Jun 2020 07:58:13: 31000000 INFO @ Fri, 26 Jun 2020 07:58:15: 31000000 INFO @ Fri, 26 Jun 2020 07:58:21: 25000000 INFO @ Fri, 26 Jun 2020 07:58:22: 32000000 INFO @ Fri, 26 Jun 2020 07:58:24: 32000000 INFO @ Fri, 26 Jun 2020 07:58:30: 26000000 INFO @ Fri, 26 Jun 2020 07:58:31: 33000000 INFO @ Fri, 26 Jun 2020 07:58:32: 33000000 INFO @ Fri, 26 Jun 2020 07:58:39: 27000000 INFO @ Fri, 26 Jun 2020 07:58:41: 34000000 INFO @ Fri, 26 Jun 2020 07:58:41: 34000000 INFO @ Fri, 26 Jun 2020 07:58:48: 28000000 INFO @ Fri, 26 Jun 2020 07:58:50: 35000000 INFO @ Fri, 26 Jun 2020 07:58:51: 35000000 INFO @ Fri, 26 Jun 2020 07:58:57: 29000000 INFO @ Fri, 26 Jun 2020 07:59:01: 36000000 INFO @ Fri, 26 Jun 2020 07:59:01: 36000000 BigWig に変換しました。 INFO @ Fri, 26 Jun 2020 07:59:07: 30000000 INFO @ Fri, 26 Jun 2020 07:59:11: 37000000 INFO @ Fri, 26 Jun 2020 07:59:11: 37000000 INFO @ Fri, 26 Jun 2020 07:59:16: 31000000 INFO @ Fri, 26 Jun 2020 07:59:21: 38000000 INFO @ Fri, 26 Jun 2020 07:59:21: 38000000 INFO @ Fri, 26 Jun 2020 07:59:25: 32000000 INFO @ Fri, 26 Jun 2020 07:59:31: 39000000 INFO @ Fri, 26 Jun 2020 07:59:31: 39000000 INFO @ Fri, 26 Jun 2020 07:59:34: 33000000 INFO @ Fri, 26 Jun 2020 07:59:41: 40000000 INFO @ Fri, 26 Jun 2020 07:59:41: 40000000 INFO @ Fri, 26 Jun 2020 07:59:43: 34000000 INFO @ Fri, 26 Jun 2020 07:59:51: 41000000 INFO @ Fri, 26 Jun 2020 07:59:51: 41000000 INFO @ Fri, 26 Jun 2020 07:59:53: 35000000 INFO @ Fri, 26 Jun 2020 08:00:01: 42000000 INFO @ Fri, 26 Jun 2020 08:00:01: 42000000 INFO @ Fri, 26 Jun 2020 08:00:02: 36000000 INFO @ Fri, 26 Jun 2020 08:00:11: 37000000 INFO @ Fri, 26 Jun 2020 08:00:11: 43000000 INFO @ Fri, 26 Jun 2020 08:00:11: 43000000 INFO @ Fri, 26 Jun 2020 08:00:20: 38000000 INFO @ Fri, 26 Jun 2020 08:00:21: 44000000 INFO @ Fri, 26 Jun 2020 08:00:21: 44000000 INFO @ Fri, 26 Jun 2020 08:00:29: 39000000 INFO @ Fri, 26 Jun 2020 08:00:30: 45000000 INFO @ Fri, 26 Jun 2020 08:00:30: 45000000 INFO @ Fri, 26 Jun 2020 08:00:37: 40000000 INFO @ Fri, 26 Jun 2020 08:00:40: 46000000 INFO @ Fri, 26 Jun 2020 08:00:40: 46000000 INFO @ Fri, 26 Jun 2020 08:00:41: #1 tag size is determined as 51 bps INFO @ Fri, 26 Jun 2020 08:00:41: #1 tag size = 51 INFO @ Fri, 26 Jun 2020 08:00:41: #1 total tags in treatment: 22328491 INFO @ Fri, 26 Jun 2020 08:00:41: #1 user defined the maximum tags... INFO @ Fri, 26 Jun 2020 08:00:41: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 26 Jun 2020 08:00:41: #1 tag size is determined as 51 bps INFO @ Fri, 26 Jun 2020 08:00:42: #1 tag size = 51 INFO @ Fri, 26 Jun 2020 08:00:42: #1 total tags in treatment: 22328491 INFO @ Fri, 26 Jun 2020 08:00:42: #1 user defined the maximum tags... INFO @ Fri, 26 Jun 2020 08:00:42: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 26 Jun 2020 08:00:42: #1 tags after filtering in treatment: 18009048 INFO @ Fri, 26 Jun 2020 08:00:42: #1 Redundant rate of treatment: 0.19 INFO @ Fri, 26 Jun 2020 08:00:42: #1 finished! INFO @ Fri, 26 Jun 2020 08:00:42: #2 Build Peak Model... INFO @ Fri, 26 Jun 2020 08:00:42: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 26 Jun 2020 08:00:42: #1 tags after filtering in treatment: 18009048 INFO @ Fri, 26 Jun 2020 08:00:42: #1 Redundant rate of treatment: 0.19 INFO @ Fri, 26 Jun 2020 08:00:42: #1 finished! INFO @ Fri, 26 Jun 2020 08:00:42: #2 Build Peak Model... INFO @ Fri, 26 Jun 2020 08:00:42: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 26 Jun 2020 08:00:43: #2 number of paired peaks: 211 WARNING @ Fri, 26 Jun 2020 08:00:43: Fewer paired peaks (211) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 211 pairs to build model! INFO @ Fri, 26 Jun 2020 08:00:43: start model_add_line... INFO @ Fri, 26 Jun 2020 08:00:43: #2 number of paired peaks: 211 WARNING @ Fri, 26 Jun 2020 08:00:43: Fewer paired peaks (211) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 211 pairs to build model! INFO @ Fri, 26 Jun 2020 08:00:43: start model_add_line... INFO @ Fri, 26 Jun 2020 08:00:43: start X-correlation... INFO @ Fri, 26 Jun 2020 08:00:43: end of X-cor INFO @ Fri, 26 Jun 2020 08:00:43: #2 finished! INFO @ Fri, 26 Jun 2020 08:00:43: #2 predicted fragment length is 125 bps INFO @ Fri, 26 Jun 2020 08:00:43: #2 alternative fragment length(s) may be 4,125 bps INFO @ Fri, 26 Jun 2020 08:00:43: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.05_model.r INFO @ Fri, 26 Jun 2020 08:00:43: #3 Call peaks... INFO @ Fri, 26 Jun 2020 08:00:43: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 26 Jun 2020 08:00:43: start X-correlation... INFO @ Fri, 26 Jun 2020 08:00:43: end of X-cor INFO @ Fri, 26 Jun 2020 08:00:43: #2 finished! INFO @ Fri, 26 Jun 2020 08:00:43: #2 predicted fragment length is 125 bps INFO @ Fri, 26 Jun 2020 08:00:43: #2 alternative fragment length(s) may be 4,125 bps INFO @ Fri, 26 Jun 2020 08:00:43: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.10_model.r INFO @ Fri, 26 Jun 2020 08:00:44: #3 Call peaks... INFO @ Fri, 26 Jun 2020 08:00:44: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 26 Jun 2020 08:00:46: 41000000 INFO @ Fri, 26 Jun 2020 08:00:54: 42000000 INFO @ Fri, 26 Jun 2020 08:01:01: 43000000 INFO @ Fri, 26 Jun 2020 08:01:09: 44000000 INFO @ Fri, 26 Jun 2020 08:01:17: 45000000 INFO @ Fri, 26 Jun 2020 08:01:23: #3 Call peaks for each chromosome... INFO @ Fri, 26 Jun 2020 08:01:23: #3 Call peaks for each chromosome... INFO @ Fri, 26 Jun 2020 08:01:24: 46000000 INFO @ Fri, 26 Jun 2020 08:01:25: #1 tag size is determined as 51 bps INFO @ Fri, 26 Jun 2020 08:01:25: #1 tag size = 51 INFO @ Fri, 26 Jun 2020 08:01:25: #1 total tags in treatment: 22328491 INFO @ Fri, 26 Jun 2020 08:01:25: #1 user defined the maximum tags... INFO @ Fri, 26 Jun 2020 08:01:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 26 Jun 2020 08:01:26: #1 tags after filtering in treatment: 18009048 INFO @ Fri, 26 Jun 2020 08:01:26: #1 Redundant rate of treatment: 0.19 INFO @ Fri, 26 Jun 2020 08:01:26: #1 finished! INFO @ Fri, 26 Jun 2020 08:01:26: #2 Build Peak Model... INFO @ Fri, 26 Jun 2020 08:01:26: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 26 Jun 2020 08:01:27: #2 number of paired peaks: 211 WARNING @ Fri, 26 Jun 2020 08:01:27: Fewer paired peaks (211) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 211 pairs to build model! INFO @ Fri, 26 Jun 2020 08:01:27: start model_add_line... INFO @ Fri, 26 Jun 2020 08:01:27: start X-correlation... INFO @ Fri, 26 Jun 2020 08:01:27: end of X-cor INFO @ Fri, 26 Jun 2020 08:01:27: #2 finished! INFO @ Fri, 26 Jun 2020 08:01:27: #2 predicted fragment length is 125 bps INFO @ Fri, 26 Jun 2020 08:01:27: #2 alternative fragment length(s) may be 4,125 bps INFO @ Fri, 26 Jun 2020 08:01:27: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.20_model.r INFO @ Fri, 26 Jun 2020 08:01:27: #3 Call peaks... INFO @ Fri, 26 Jun 2020 08:01:27: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 26 Jun 2020 08:01:43: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.10_peaks.xls INFO @ Fri, 26 Jun 2020 08:01:43: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.05_peaks.xls INFO @ Fri, 26 Jun 2020 08:01:43: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.10_peaks.narrowPeak INFO @ Fri, 26 Jun 2020 08:01:43: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.10_summits.bed INFO @ Fri, 26 Jun 2020 08:01:43: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.05_peaks.narrowPeak INFO @ Fri, 26 Jun 2020 08:01:43: Done! INFO @ Fri, 26 Jun 2020 08:01:43: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.05_summits.bed INFO @ Fri, 26 Jun 2020 08:01:43: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (2520 records, 4 fields): 4 millis CompletedMACS2peakCalling pass1 - making usageList (7 chroms): 2 millis pass2 - checking and writing primary data (4011 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Fri, 26 Jun 2020 08:02:06: #3 Call peaks for each chromosome... INFO @ Fri, 26 Jun 2020 08:02:26: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.20_peaks.xls INFO @ Fri, 26 Jun 2020 08:02:26: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.20_peaks.narrowPeak INFO @ Fri, 26 Jun 2020 08:02:26: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX4085396/SRX4085396.20_summits.bed INFO @ Fri, 26 Jun 2020 08:02:26: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (1307 records, 4 fields): 4 millis CompletedMACS2peakCalling