Job ID = 12264763 SRX = SRX3029128 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 67029433 spots for SRR5860428/SRR5860428.sra Written 67029433 spots for SRR5860428/SRR5860428.sra fastq に変換しました。 bowtie でマッピング中... Your job 12265629 ("srTce11") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:00:50 67029433 reads; of these: 67029433 (100.00%) were paired; of these: 37301280 (55.65%) aligned concordantly 0 times 25648974 (38.27%) aligned concordantly exactly 1 time 4079179 (6.09%) aligned concordantly >1 times ---- 37301280 pairs aligned concordantly 0 times; of these: 6002162 (16.09%) aligned discordantly 1 time ---- 31299118 pairs aligned 0 times concordantly or discordantly; of these: 62598236 mates make up the pairs; of these: 59614250 (95.23%) aligned 0 times 1256299 (2.01%) aligned exactly 1 time 1727687 (2.76%) aligned >1 times 55.53% overall alignment rate Time searching: 01:00:50 Overall time: 01:00:50 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 15955769 / 35267728 = 0.4524 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:51:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:51:47: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:51:47: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:51:53: 1000000 INFO @ Sat, 03 Apr 2021 07:51:59: 2000000 INFO @ Sat, 03 Apr 2021 07:52:05: 3000000 INFO @ Sat, 03 Apr 2021 07:52:11: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:52:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:52:16: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:52:16: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:52:17: 5000000 INFO @ Sat, 03 Apr 2021 07:52:23: 1000000 INFO @ Sat, 03 Apr 2021 07:52:23: 6000000 INFO @ Sat, 03 Apr 2021 07:52:30: 2000000 INFO @ Sat, 03 Apr 2021 07:52:30: 7000000 INFO @ Sat, 03 Apr 2021 07:52:37: 8000000 INFO @ Sat, 03 Apr 2021 07:52:37: 3000000 INFO @ Sat, 03 Apr 2021 07:52:44: 9000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:52:44: 4000000 INFO @ Sat, 03 Apr 2021 07:52:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:52:47: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:52:47: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:52:51: 10000000 INFO @ Sat, 03 Apr 2021 07:52:51: 5000000 INFO @ Sat, 03 Apr 2021 07:52:55: 1000000 INFO @ Sat, 03 Apr 2021 07:52:58: 11000000 INFO @ Sat, 03 Apr 2021 07:52:58: 6000000 INFO @ Sat, 03 Apr 2021 07:53:02: 2000000 INFO @ Sat, 03 Apr 2021 07:53:05: 12000000 INFO @ Sat, 03 Apr 2021 07:53:06: 7000000 INFO @ Sat, 03 Apr 2021 07:53:09: 3000000 INFO @ Sat, 03 Apr 2021 07:53:12: 13000000 INFO @ Sat, 03 Apr 2021 07:53:13: 8000000 INFO @ Sat, 03 Apr 2021 07:53:16: 4000000 INFO @ Sat, 03 Apr 2021 07:53:19: 14000000 INFO @ Sat, 03 Apr 2021 07:53:20: 9000000 INFO @ Sat, 03 Apr 2021 07:53:24: 5000000 INFO @ Sat, 03 Apr 2021 07:53:26: 15000000 INFO @ Sat, 03 Apr 2021 07:53:27: 10000000 INFO @ Sat, 03 Apr 2021 07:53:31: 6000000 INFO @ Sat, 03 Apr 2021 07:53:32: 16000000 INFO @ Sat, 03 Apr 2021 07:53:33: 11000000 INFO @ Sat, 03 Apr 2021 07:53:37: 7000000 INFO @ Sat, 03 Apr 2021 07:53:39: 17000000 INFO @ Sat, 03 Apr 2021 07:53:40: 12000000 INFO @ Sat, 03 Apr 2021 07:53:43: 8000000 INFO @ Sat, 03 Apr 2021 07:53:46: 18000000 INFO @ Sat, 03 Apr 2021 07:53:47: 13000000 INFO @ Sat, 03 Apr 2021 07:53:50: 9000000 INFO @ Sat, 03 Apr 2021 07:53:52: 19000000 INFO @ Sat, 03 Apr 2021 07:53:54: 14000000 INFO @ Sat, 03 Apr 2021 07:53:56: 10000000 INFO @ Sat, 03 Apr 2021 07:53:59: 20000000 INFO @ Sat, 03 Apr 2021 07:54:00: 15000000 INFO @ Sat, 03 Apr 2021 07:54:04: 11000000 INFO @ Sat, 03 Apr 2021 07:54:06: 21000000 INFO @ Sat, 03 Apr 2021 07:54:07: 16000000 INFO @ Sat, 03 Apr 2021 07:54:12: 12000000 INFO @ Sat, 03 Apr 2021 07:54:13: 22000000 INFO @ Sat, 03 Apr 2021 07:54:15: 17000000 INFO @ Sat, 03 Apr 2021 07:54:19: 13000000 INFO @ Sat, 03 Apr 2021 07:54:20: 23000000 INFO @ Sat, 03 Apr 2021 07:54:22: 18000000 INFO @ Sat, 03 Apr 2021 07:54:25: 14000000 INFO @ Sat, 03 Apr 2021 07:54:27: 24000000 INFO @ Sat, 03 Apr 2021 07:54:29: 19000000 INFO @ Sat, 03 Apr 2021 07:54:31: 15000000 INFO @ Sat, 03 Apr 2021 07:54:34: 25000000 INFO @ Sat, 03 Apr 2021 07:54:36: 20000000 INFO @ Sat, 03 Apr 2021 07:54:38: 16000000 INFO @ Sat, 03 Apr 2021 07:54:41: 26000000 INFO @ Sat, 03 Apr 2021 07:54:43: 21000000 INFO @ Sat, 03 Apr 2021 07:54:44: 17000000 INFO @ Sat, 03 Apr 2021 07:54:48: 27000000 INFO @ Sat, 03 Apr 2021 07:54:50: 22000000 INFO @ Sat, 03 Apr 2021 07:54:51: 18000000 INFO @ Sat, 03 Apr 2021 07:54:55: 28000000 INFO @ Sat, 03 Apr 2021 07:54:57: 19000000 INFO @ Sat, 03 Apr 2021 07:54:57: 23000000 INFO @ Sat, 03 Apr 2021 07:55:02: 29000000 INFO @ Sat, 03 Apr 2021 07:55:04: 20000000 INFO @ Sat, 03 Apr 2021 07:55:04: 24000000 INFO @ Sat, 03 Apr 2021 07:55:09: 30000000 INFO @ Sat, 03 Apr 2021 07:55:11: 21000000 INFO @ Sat, 03 Apr 2021 07:55:11: 25000000 INFO @ Sat, 03 Apr 2021 07:55:15: 31000000 INFO @ Sat, 03 Apr 2021 07:55:17: 22000000 INFO @ Sat, 03 Apr 2021 07:55:18: 26000000 INFO @ Sat, 03 Apr 2021 07:55:22: 32000000 INFO @ Sat, 03 Apr 2021 07:55:24: 23000000 INFO @ Sat, 03 Apr 2021 07:55:25: 27000000 INFO @ Sat, 03 Apr 2021 07:55:29: 33000000 INFO @ Sat, 03 Apr 2021 07:55:31: 24000000 INFO @ Sat, 03 Apr 2021 07:55:32: 28000000 INFO @ Sat, 03 Apr 2021 07:55:36: 34000000 INFO @ Sat, 03 Apr 2021 07:55:37: 25000000 INFO @ Sat, 03 Apr 2021 07:55:39: 29000000 INFO @ Sat, 03 Apr 2021 07:55:43: 35000000 INFO @ Sat, 03 Apr 2021 07:55:45: 26000000 INFO @ Sat, 03 Apr 2021 07:55:46: 30000000 INFO @ Sat, 03 Apr 2021 07:55:50: 36000000 INFO @ Sat, 03 Apr 2021 07:55:51: 27000000 INFO @ Sat, 03 Apr 2021 07:55:53: 31000000 INFO @ Sat, 03 Apr 2021 07:55:57: 37000000 INFO @ Sat, 03 Apr 2021 07:55:57: 28000000 INFO @ Sat, 03 Apr 2021 07:56:00: 32000000 INFO @ Sat, 03 Apr 2021 07:56:03: 38000000 INFO @ Sat, 03 Apr 2021 07:56:04: 29000000 INFO @ Sat, 03 Apr 2021 07:56:07: 33000000 INFO @ Sat, 03 Apr 2021 07:56:10: 30000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 07:56:10: 39000000 INFO @ Sat, 03 Apr 2021 07:56:14: 34000000 INFO @ Sat, 03 Apr 2021 07:56:16: 31000000 INFO @ Sat, 03 Apr 2021 07:56:17: 40000000 INFO @ Sat, 03 Apr 2021 07:56:21: 35000000 INFO @ Sat, 03 Apr 2021 07:56:22: 32000000 INFO @ Sat, 03 Apr 2021 07:56:24: 41000000 INFO @ Sat, 03 Apr 2021 07:56:28: 33000000 INFO @ Sat, 03 Apr 2021 07:56:28: 36000000 INFO @ Sat, 03 Apr 2021 07:56:31: 42000000 INFO @ Sat, 03 Apr 2021 07:56:34: #1 tag size is determined as 76 bps INFO @ Sat, 03 Apr 2021 07:56:34: #1 tag size = 76 INFO @ Sat, 03 Apr 2021 07:56:34: #1 total tags in treatment: 16587429 INFO @ Sat, 03 Apr 2021 07:56:34: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:56:34: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:56:34: 34000000 INFO @ Sat, 03 Apr 2021 07:56:35: #1 tags after filtering in treatment: 11077362 INFO @ Sat, 03 Apr 2021 07:56:35: #1 Redundant rate of treatment: 0.33 INFO @ Sat, 03 Apr 2021 07:56:35: #1 finished! INFO @ Sat, 03 Apr 2021 07:56:35: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:56:35: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:56:35: 37000000 INFO @ Sat, 03 Apr 2021 07:56:36: #2 number of paired peaks: 513 WARNING @ Sat, 03 Apr 2021 07:56:36: Fewer paired peaks (513) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 513 pairs to build model! INFO @ Sat, 03 Apr 2021 07:56:36: start model_add_line... INFO @ Sat, 03 Apr 2021 07:56:36: start X-correlation... INFO @ Sat, 03 Apr 2021 07:56:36: end of X-cor INFO @ Sat, 03 Apr 2021 07:56:36: #2 finished! INFO @ Sat, 03 Apr 2021 07:56:36: #2 predicted fragment length is 111 bps INFO @ Sat, 03 Apr 2021 07:56:36: #2 alternative fragment length(s) may be 111 bps INFO @ Sat, 03 Apr 2021 07:56:36: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.05_model.r WARNING @ Sat, 03 Apr 2021 07:56:36: #2 Since the d (111) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:56:36: #2 You may need to consider one of the other alternative d(s): 111 WARNING @ Sat, 03 Apr 2021 07:56:36: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:56:36: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:56:36: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:56:41: 35000000 INFO @ Sat, 03 Apr 2021 07:56:43: 38000000 INFO @ Sat, 03 Apr 2021 07:56:49: 39000000 INFO @ Sat, 03 Apr 2021 07:56:50: 36000000 INFO @ Sat, 03 Apr 2021 07:56:56: 40000000 INFO @ Sat, 03 Apr 2021 07:56:58: 37000000 INFO @ Sat, 03 Apr 2021 07:56:58: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:57:03: 41000000 INFO @ Sat, 03 Apr 2021 07:57:05: 38000000 INFO @ Sat, 03 Apr 2021 07:57:09: 42000000 INFO @ Sat, 03 Apr 2021 07:57:10: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.05_peaks.xls INFO @ Sat, 03 Apr 2021 07:57:10: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:57:11: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.05_summits.bed INFO @ Sat, 03 Apr 2021 07:57:11: Done! pass1 - making usageList (7 chroms): 2 millis pass2 - checking and writing primary data (8840 records, 4 fields): 20 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:57:12: 39000000 INFO @ Sat, 03 Apr 2021 07:57:12: #1 tag size is determined as 76 bps INFO @ Sat, 03 Apr 2021 07:57:12: #1 tag size = 76 INFO @ Sat, 03 Apr 2021 07:57:12: #1 total tags in treatment: 16587429 INFO @ Sat, 03 Apr 2021 07:57:12: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:57:12: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:57:13: #1 tags after filtering in treatment: 11077362 INFO @ Sat, 03 Apr 2021 07:57:13: #1 Redundant rate of treatment: 0.33 INFO @ Sat, 03 Apr 2021 07:57:13: #1 finished! INFO @ Sat, 03 Apr 2021 07:57:13: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:57:13: #2 looking for paired plus/minus strand peaks... BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 07:57:14: #2 number of paired peaks: 513 WARNING @ Sat, 03 Apr 2021 07:57:14: Fewer paired peaks (513) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 513 pairs to build model! INFO @ Sat, 03 Apr 2021 07:57:14: start model_add_line... INFO @ Sat, 03 Apr 2021 07:57:14: start X-correlation... INFO @ Sat, 03 Apr 2021 07:57:14: end of X-cor INFO @ Sat, 03 Apr 2021 07:57:14: #2 finished! INFO @ Sat, 03 Apr 2021 07:57:14: #2 predicted fragment length is 111 bps INFO @ Sat, 03 Apr 2021 07:57:14: #2 alternative fragment length(s) may be 111 bps INFO @ Sat, 03 Apr 2021 07:57:14: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.10_model.r WARNING @ Sat, 03 Apr 2021 07:57:14: #2 Since the d (111) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:57:14: #2 You may need to consider one of the other alternative d(s): 111 WARNING @ Sat, 03 Apr 2021 07:57:14: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:57:14: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:57:14: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:57:20: 40000000 INFO @ Sat, 03 Apr 2021 07:57:25: 41000000 INFO @ Sat, 03 Apr 2021 07:57:31: 42000000 INFO @ Sat, 03 Apr 2021 07:57:34: #1 tag size is determined as 76 bps INFO @ Sat, 03 Apr 2021 07:57:34: #1 tag size = 76 INFO @ Sat, 03 Apr 2021 07:57:34: #1 total tags in treatment: 16587429 INFO @ Sat, 03 Apr 2021 07:57:34: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:57:34: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:57:34: #1 tags after filtering in treatment: 11077362 INFO @ Sat, 03 Apr 2021 07:57:34: #1 Redundant rate of treatment: 0.33 INFO @ Sat, 03 Apr 2021 07:57:34: #1 finished! INFO @ Sat, 03 Apr 2021 07:57:34: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:57:34: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:57:35: #2 number of paired peaks: 513 WARNING @ Sat, 03 Apr 2021 07:57:35: Fewer paired peaks (513) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 513 pairs to build model! INFO @ Sat, 03 Apr 2021 07:57:35: start model_add_line... INFO @ Sat, 03 Apr 2021 07:57:35: start X-correlation... INFO @ Sat, 03 Apr 2021 07:57:35: end of X-cor INFO @ Sat, 03 Apr 2021 07:57:35: #2 finished! INFO @ Sat, 03 Apr 2021 07:57:35: #2 predicted fragment length is 111 bps INFO @ Sat, 03 Apr 2021 07:57:35: #2 alternative fragment length(s) may be 111 bps INFO @ Sat, 03 Apr 2021 07:57:35: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.20_model.r WARNING @ Sat, 03 Apr 2021 07:57:35: #2 Since the d (111) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:57:35: #2 You may need to consider one of the other alternative d(s): 111 WARNING @ Sat, 03 Apr 2021 07:57:35: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:57:35: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:57:35: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:57:36: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:57:47: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.10_peaks.xls INFO @ Sat, 03 Apr 2021 07:57:47: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:57:47: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.10_summits.bed INFO @ Sat, 03 Apr 2021 07:57:47: Done! pass1 - making usageList (7 chroms): 2 millis pass2 - checking and writing primary data (4924 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:57:57: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:58:08: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.20_peaks.xls INFO @ Sat, 03 Apr 2021 07:58:08: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:58:08: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX3029128/SRX3029128.20_summits.bed INFO @ Sat, 03 Apr 2021 07:58:08: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (2381 records, 4 fields): 4 millis CompletedMACS2peakCalling