Job ID = 1292008 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... spots read : 43,812,245 reads read : 87,624,490 reads written : 87,624,490 rm: cannot remove ‘[DSE]RR*’: No such file or directory rm: cannot remove ‘fastqDump_tmp*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:47:11 43812245 reads; of these: 43812245 (100.00%) were paired; of these: 2628570 (6.00%) aligned concordantly 0 times 34652512 (79.09%) aligned concordantly exactly 1 time 6531163 (14.91%) aligned concordantly >1 times ---- 2628570 pairs aligned concordantly 0 times; of these: 560345 (21.32%) aligned discordantly 1 time ---- 2068225 pairs aligned 0 times concordantly or discordantly; of these: 4136450 mates make up the pairs; of these: 2689695 (65.02%) aligned 0 times 995421 (24.06%) aligned exactly 1 time 451334 (10.91%) aligned >1 times 96.93% overall alignment rate Time searching: 00:47:11 Overall time: 00:47:11 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 889111 / 41326110 = 0.0215 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 02 Jun 2019 18:56:21: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 18:56:21: #1 read tag files... INFO @ Sun, 02 Jun 2019 18:56:21: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 18:56:21: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 18:56:21: #1 read tag files... INFO @ Sun, 02 Jun 2019 18:56:21: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 18:56:21: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 18:56:21: #1 read tag files... INFO @ Sun, 02 Jun 2019 18:56:21: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 18:56:30: 1000000 INFO @ Sun, 02 Jun 2019 18:56:31: 1000000 INFO @ Sun, 02 Jun 2019 18:56:32: 1000000 INFO @ Sun, 02 Jun 2019 18:56:38: 2000000 INFO @ Sun, 02 Jun 2019 18:56:41: 2000000 INFO @ Sun, 02 Jun 2019 18:56:42: 2000000 INFO @ Sun, 02 Jun 2019 18:56:46: 3000000 INFO @ Sun, 02 Jun 2019 18:56:50: 3000000 INFO @ Sun, 02 Jun 2019 18:56:52: 3000000 INFO @ Sun, 02 Jun 2019 18:56:54: 4000000 INFO @ Sun, 02 Jun 2019 18:56:59: 4000000 INFO @ Sun, 02 Jun 2019 18:57:01: 4000000 INFO @ Sun, 02 Jun 2019 18:57:02: 5000000 INFO @ Sun, 02 Jun 2019 18:57:08: 5000000 INFO @ Sun, 02 Jun 2019 18:57:10: 6000000 INFO @ Sun, 02 Jun 2019 18:57:11: 5000000 INFO @ Sun, 02 Jun 2019 18:57:17: 6000000 INFO @ Sun, 02 Jun 2019 18:57:18: 7000000 INFO @ Sun, 02 Jun 2019 18:57:20: 6000000 INFO @ Sun, 02 Jun 2019 18:57:26: 8000000 INFO @ Sun, 02 Jun 2019 18:57:26: 7000000 INFO @ Sun, 02 Jun 2019 18:57:29: 7000000 INFO @ Sun, 02 Jun 2019 18:57:34: 9000000 INFO @ Sun, 02 Jun 2019 18:57:36: 8000000 INFO @ Sun, 02 Jun 2019 18:57:37: 8000000 INFO @ Sun, 02 Jun 2019 18:57:42: 10000000 INFO @ Sun, 02 Jun 2019 18:57:46: 9000000 INFO @ Sun, 02 Jun 2019 18:57:47: 9000000 INFO @ Sun, 02 Jun 2019 18:57:51: 11000000 INFO @ Sun, 02 Jun 2019 18:57:55: 10000000 INFO @ Sun, 02 Jun 2019 18:57:56: 10000000 INFO @ Sun, 02 Jun 2019 18:57:59: 12000000 INFO @ Sun, 02 Jun 2019 18:58:03: 11000000 INFO @ Sun, 02 Jun 2019 18:58:05: 11000000 INFO @ Sun, 02 Jun 2019 18:58:07: 13000000 INFO @ Sun, 02 Jun 2019 18:58:11: 12000000 INFO @ Sun, 02 Jun 2019 18:58:14: 12000000 INFO @ Sun, 02 Jun 2019 18:58:14: 14000000 INFO @ Sun, 02 Jun 2019 18:58:19: 13000000 INFO @ Sun, 02 Jun 2019 18:58:22: 15000000 INFO @ Sun, 02 Jun 2019 18:58:23: 13000000 INFO @ Sun, 02 Jun 2019 18:58:27: 14000000 INFO @ Sun, 02 Jun 2019 18:58:30: 16000000 INFO @ Sun, 02 Jun 2019 18:58:32: 14000000 INFO @ Sun, 02 Jun 2019 18:58:35: 15000000 INFO @ Sun, 02 Jun 2019 18:58:38: 17000000 INFO @ Sun, 02 Jun 2019 18:58:40: 15000000 INFO @ Sun, 02 Jun 2019 18:58:42: 16000000 INFO @ Sun, 02 Jun 2019 18:58:46: 18000000 INFO @ Sun, 02 Jun 2019 18:58:50: 16000000 INFO @ Sun, 02 Jun 2019 18:58:51: 17000000 INFO @ Sun, 02 Jun 2019 18:58:55: 19000000 INFO @ Sun, 02 Jun 2019 18:58:59: 17000000 INFO @ Sun, 02 Jun 2019 18:59:00: 18000000 INFO @ Sun, 02 Jun 2019 18:59:03: 20000000 INFO @ Sun, 02 Jun 2019 18:59:08: 19000000 INFO @ Sun, 02 Jun 2019 18:59:08: 18000000 INFO @ Sun, 02 Jun 2019 18:59:11: 21000000 INFO @ Sun, 02 Jun 2019 18:59:16: 20000000 INFO @ Sun, 02 Jun 2019 18:59:17: 19000000 INFO @ Sun, 02 Jun 2019 18:59:19: 22000000 INFO @ Sun, 02 Jun 2019 18:59:24: 21000000 INFO @ Sun, 02 Jun 2019 18:59:26: 20000000 INFO @ Sun, 02 Jun 2019 18:59:27: 23000000 INFO @ Sun, 02 Jun 2019 18:59:32: 22000000 INFO @ Sun, 02 Jun 2019 18:59:34: 24000000 INFO @ Sun, 02 Jun 2019 18:59:35: 21000000 INFO @ Sun, 02 Jun 2019 18:59:42: 23000000 INFO @ Sun, 02 Jun 2019 18:59:42: 25000000 INFO @ Sun, 02 Jun 2019 18:59:44: 22000000 INFO @ Sun, 02 Jun 2019 18:59:50: 24000000 INFO @ Sun, 02 Jun 2019 18:59:50: 26000000 INFO @ Sun, 02 Jun 2019 18:59:53: 23000000 INFO @ Sun, 02 Jun 2019 18:59:58: 25000000 INFO @ Sun, 02 Jun 2019 18:59:58: 27000000 INFO @ Sun, 02 Jun 2019 19:00:03: 24000000 INFO @ Sun, 02 Jun 2019 19:00:06: 26000000 INFO @ Sun, 02 Jun 2019 19:00:06: 28000000 INFO @ Sun, 02 Jun 2019 19:00:12: 25000000 INFO @ Sun, 02 Jun 2019 19:00:14: 29000000 INFO @ Sun, 02 Jun 2019 19:00:14: 27000000 INFO @ Sun, 02 Jun 2019 19:00:21: 26000000 INFO @ Sun, 02 Jun 2019 19:00:22: 30000000 INFO @ Sun, 02 Jun 2019 19:00:22: 28000000 INFO @ Sun, 02 Jun 2019 19:00:30: 31000000 INFO @ Sun, 02 Jun 2019 19:00:30: 27000000 INFO @ Sun, 02 Jun 2019 19:00:30: 29000000 INFO @ Sun, 02 Jun 2019 19:00:37: 32000000 INFO @ Sun, 02 Jun 2019 19:00:38: 30000000 INFO @ Sun, 02 Jun 2019 19:00:39: 28000000 INFO @ Sun, 02 Jun 2019 19:00:45: 33000000 INFO @ Sun, 02 Jun 2019 19:00:45: 31000000 INFO @ Sun, 02 Jun 2019 19:00:48: 29000000 INFO @ Sun, 02 Jun 2019 19:00:53: 34000000 INFO @ Sun, 02 Jun 2019 19:00:53: 32000000 INFO @ Sun, 02 Jun 2019 19:00:56: 30000000 INFO @ Sun, 02 Jun 2019 19:01:01: 35000000 INFO @ Sun, 02 Jun 2019 19:01:02: 33000000 INFO @ Sun, 02 Jun 2019 19:01:05: 31000000 INFO @ Sun, 02 Jun 2019 19:01:09: 36000000 INFO @ Sun, 02 Jun 2019 19:01:10: 34000000 INFO @ Sun, 02 Jun 2019 19:01:14: 32000000 INFO @ Sun, 02 Jun 2019 19:01:16: 37000000 INFO @ Sun, 02 Jun 2019 19:01:18: 35000000 INFO @ Sun, 02 Jun 2019 19:01:23: 33000000 INFO @ Sun, 02 Jun 2019 19:01:25: 38000000 INFO @ Sun, 02 Jun 2019 19:01:26: 36000000 INFO @ Sun, 02 Jun 2019 19:01:32: 34000000 INFO @ Sun, 02 Jun 2019 19:01:32: 39000000 INFO @ Sun, 02 Jun 2019 19:01:34: 37000000 INFO @ Sun, 02 Jun 2019 19:01:40: 40000000 INFO @ Sun, 02 Jun 2019 19:01:40: 35000000 INFO @ Sun, 02 Jun 2019 19:01:42: 38000000 INFO @ Sun, 02 Jun 2019 19:01:48: 41000000 INFO @ Sun, 02 Jun 2019 19:01:49: 36000000 INFO @ Sun, 02 Jun 2019 19:01:49: 39000000 INFO @ Sun, 02 Jun 2019 19:01:55: 42000000 INFO @ Sun, 02 Jun 2019 19:01:57: 40000000 INFO @ Sun, 02 Jun 2019 19:01:58: 37000000 INFO @ Sun, 02 Jun 2019 19:02:03: 43000000 INFO @ Sun, 02 Jun 2019 19:02:05: 41000000 INFO @ Sun, 02 Jun 2019 19:02:07: 38000000 INFO @ Sun, 02 Jun 2019 19:02:12: 44000000 INFO @ Sun, 02 Jun 2019 19:02:14: 42000000 INFO @ Sun, 02 Jun 2019 19:02:16: 39000000 INFO @ Sun, 02 Jun 2019 19:02:20: 45000000 INFO @ Sun, 02 Jun 2019 19:02:21: 43000000 INFO @ Sun, 02 Jun 2019 19:02:25: 40000000 INFO @ Sun, 02 Jun 2019 19:02:27: 46000000 INFO @ Sun, 02 Jun 2019 19:02:29: 44000000 INFO @ Sun, 02 Jun 2019 19:02:34: 41000000 INFO @ Sun, 02 Jun 2019 19:02:36: 47000000 INFO @ Sun, 02 Jun 2019 19:02:37: 45000000 INFO @ Sun, 02 Jun 2019 19:02:43: 42000000 INFO @ Sun, 02 Jun 2019 19:02:43: 48000000 INFO @ Sun, 02 Jun 2019 19:02:45: 46000000 INFO @ Sun, 02 Jun 2019 19:02:52: 49000000 INFO @ Sun, 02 Jun 2019 19:02:52: 43000000 INFO @ Sun, 02 Jun 2019 19:02:53: 47000000 INFO @ Sun, 02 Jun 2019 19:03:00: 44000000 INFO @ Sun, 02 Jun 2019 19:03:01: 50000000 INFO @ Sun, 02 Jun 2019 19:03:01: 48000000 INFO @ Sun, 02 Jun 2019 19:03:09: 51000000 INFO @ Sun, 02 Jun 2019 19:03:09: 49000000 INFO @ Sun, 02 Jun 2019 19:03:10: 45000000 INFO @ Sun, 02 Jun 2019 19:03:17: 52000000 INFO @ Sun, 02 Jun 2019 19:03:17: 50000000 INFO @ Sun, 02 Jun 2019 19:03:19: 46000000 INFO @ Sun, 02 Jun 2019 19:03:25: 53000000 INFO @ Sun, 02 Jun 2019 19:03:25: 51000000 INFO @ Sun, 02 Jun 2019 19:03:28: 47000000 INFO @ Sun, 02 Jun 2019 19:03:33: 54000000 INFO @ Sun, 02 Jun 2019 19:03:33: 52000000 INFO @ Sun, 02 Jun 2019 19:03:36: 48000000 INFO @ Sun, 02 Jun 2019 19:03:41: 55000000 INFO @ Sun, 02 Jun 2019 19:03:41: 53000000 INFO @ Sun, 02 Jun 2019 19:03:45: 49000000 INFO @ Sun, 02 Jun 2019 19:03:49: 56000000 INFO @ Sun, 02 Jun 2019 19:03:49: 54000000 INFO @ Sun, 02 Jun 2019 19:03:54: 50000000 INFO @ Sun, 02 Jun 2019 19:03:57: 55000000 INFO @ Sun, 02 Jun 2019 19:03:57: 57000000 INFO @ Sun, 02 Jun 2019 19:04:03: 51000000 INFO @ Sun, 02 Jun 2019 19:04:04: 56000000 INFO @ Sun, 02 Jun 2019 19:04:05: 58000000 INFO @ Sun, 02 Jun 2019 19:04:12: 52000000 INFO @ Sun, 02 Jun 2019 19:04:12: 57000000 INFO @ Sun, 02 Jun 2019 19:04:13: 59000000 INFO @ Sun, 02 Jun 2019 19:04:20: 58000000 INFO @ Sun, 02 Jun 2019 19:04:20: 60000000 INFO @ Sun, 02 Jun 2019 19:04:21: 53000000 INFO @ Sun, 02 Jun 2019 19:04:28: 59000000 INFO @ Sun, 02 Jun 2019 19:04:28: 61000000 INFO @ Sun, 02 Jun 2019 19:04:30: 54000000 INFO @ Sun, 02 Jun 2019 19:04:36: 60000000 INFO @ Sun, 02 Jun 2019 19:04:36: 62000000 INFO @ Sun, 02 Jun 2019 19:04:39: 55000000 INFO @ Sun, 02 Jun 2019 19:04:44: 61000000 INFO @ Sun, 02 Jun 2019 19:04:44: 63000000 INFO @ Sun, 02 Jun 2019 19:04:48: 56000000 INFO @ Sun, 02 Jun 2019 19:04:51: 62000000 INFO @ Sun, 02 Jun 2019 19:04:51: 64000000 INFO @ Sun, 02 Jun 2019 19:04:56: 57000000 INFO @ Sun, 02 Jun 2019 19:04:59: 63000000 INFO @ Sun, 02 Jun 2019 19:05:00: 65000000 INFO @ Sun, 02 Jun 2019 19:05:06: 58000000 INFO @ Sun, 02 Jun 2019 19:05:08: 64000000 INFO @ Sun, 02 Jun 2019 19:05:08: 66000000 INFO @ Sun, 02 Jun 2019 19:05:15: 59000000 INFO @ Sun, 02 Jun 2019 19:05:16: 65000000 INFO @ Sun, 02 Jun 2019 19:05:16: 67000000 INFO @ Sun, 02 Jun 2019 19:05:23: 60000000 INFO @ Sun, 02 Jun 2019 19:05:23: 66000000 INFO @ Sun, 02 Jun 2019 19:05:24: 68000000 INFO @ Sun, 02 Jun 2019 19:05:32: 67000000 INFO @ Sun, 02 Jun 2019 19:05:32: 69000000 INFO @ Sun, 02 Jun 2019 19:05:32: 61000000 INFO @ Sun, 02 Jun 2019 19:05:39: 70000000 INFO @ Sun, 02 Jun 2019 19:05:40: 68000000 INFO @ Sun, 02 Jun 2019 19:05:41: 62000000 INFO @ Sun, 02 Jun 2019 19:05:47: 71000000 INFO @ Sun, 02 Jun 2019 19:05:47: 69000000 INFO @ Sun, 02 Jun 2019 19:05:50: 63000000 INFO @ Sun, 02 Jun 2019 19:05:55: 72000000 INFO @ Sun, 02 Jun 2019 19:05:55: 70000000 INFO @ Sun, 02 Jun 2019 19:05:59: 64000000 INFO @ Sun, 02 Jun 2019 19:06:03: 73000000 INFO @ Sun, 02 Jun 2019 19:06:03: 71000000 INFO @ Sun, 02 Jun 2019 19:06:08: 65000000 INFO @ Sun, 02 Jun 2019 19:06:11: 74000000 INFO @ Sun, 02 Jun 2019 19:06:11: 72000000 INFO @ Sun, 02 Jun 2019 19:06:17: 66000000 INFO @ Sun, 02 Jun 2019 19:06:19: 75000000 INFO @ Sun, 02 Jun 2019 19:06:19: 73000000 INFO @ Sun, 02 Jun 2019 19:06:26: 67000000 INFO @ Sun, 02 Jun 2019 19:06:27: 76000000 INFO @ Sun, 02 Jun 2019 19:06:27: 74000000 INFO @ Sun, 02 Jun 2019 19:06:35: 68000000 INFO @ Sun, 02 Jun 2019 19:06:35: 77000000 INFO @ Sun, 02 Jun 2019 19:06:35: 75000000 INFO @ Sun, 02 Jun 2019 19:06:43: 78000000 INFO @ Sun, 02 Jun 2019 19:06:43: 76000000 INFO @ Sun, 02 Jun 2019 19:06:44: 69000000 INFO @ Sun, 02 Jun 2019 19:06:51: 79000000 INFO @ Sun, 02 Jun 2019 19:06:51: 77000000 INFO @ Sun, 02 Jun 2019 19:06:53: 70000000 INFO @ Sun, 02 Jun 2019 19:06:59: 80000000 INFO @ Sun, 02 Jun 2019 19:06:59: 78000000 INFO @ Sun, 02 Jun 2019 19:07:01: 71000000 INFO @ Sun, 02 Jun 2019 19:07:06: 81000000 INFO @ Sun, 02 Jun 2019 19:07:07: 79000000 INFO @ Sun, 02 Jun 2019 19:07:10: 72000000 INFO @ Sun, 02 Jun 2019 19:07:14: 82000000 INFO @ Sun, 02 Jun 2019 19:07:15: 80000000 INFO @ Sun, 02 Jun 2019 19:07:19: 73000000 INFO @ Sun, 02 Jun 2019 19:07:22: 83000000 INFO @ Sun, 02 Jun 2019 19:07:22: 81000000 INFO @ Sun, 02 Jun 2019 19:07:24: #1 tag size is determined as 50 bps INFO @ Sun, 02 Jun 2019 19:07:24: #1 tag size = 50 INFO @ Sun, 02 Jun 2019 19:07:24: #1 total tags in treatment: 40295645 INFO @ Sun, 02 Jun 2019 19:07:24: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 19:07:24: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 19:07:25: #1 tags after filtering in treatment: 33767961 INFO @ Sun, 02 Jun 2019 19:07:25: #1 Redundant rate of treatment: 0.16 INFO @ Sun, 02 Jun 2019 19:07:25: #1 finished! INFO @ Sun, 02 Jun 2019 19:07:25: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 19:07:25: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 19:07:27: 74000000 INFO @ Sun, 02 Jun 2019 19:07:29: #2 number of paired peaks: 53 WARNING @ Sun, 02 Jun 2019 19:07:29: Too few paired peaks (53) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 02 Jun 2019 19:07:29: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sun, 02 Jun 2019 19:07:30: 82000000 INFO @ Sun, 02 Jun 2019 19:07:36: 75000000 INFO @ Sun, 02 Jun 2019 19:07:38: 83000000 INFO @ Sun, 02 Jun 2019 19:07:40: #1 tag size is determined as 50 bps INFO @ Sun, 02 Jun 2019 19:07:40: #1 tag size = 50 INFO @ Sun, 02 Jun 2019 19:07:40: #1 total tags in treatment: 40295645 INFO @ Sun, 02 Jun 2019 19:07:40: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 19:07:40: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 19:07:41: #1 tags after filtering in treatment: 33767961 INFO @ Sun, 02 Jun 2019 19:07:41: #1 Redundant rate of treatment: 0.16 INFO @ Sun, 02 Jun 2019 19:07:41: #1 finished! INFO @ Sun, 02 Jun 2019 19:07:41: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 19:07:41: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 19:07:45: #2 number of paired peaks: 53 WARNING @ Sun, 02 Jun 2019 19:07:45: Too few paired peaks (53) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 02 Jun 2019 19:07:45: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sun, 02 Jun 2019 19:07:45: 76000000 INFO @ Sun, 02 Jun 2019 19:07:54: 77000000 INFO @ Sun, 02 Jun 2019 19:08:02: 78000000 INFO @ Sun, 02 Jun 2019 19:08:11: 79000000 INFO @ Sun, 02 Jun 2019 19:08:19: 80000000 INFO @ Sun, 02 Jun 2019 19:08:28: 81000000 INFO @ Sun, 02 Jun 2019 19:08:36: 82000000 INFO @ Sun, 02 Jun 2019 19:08:45: 83000000 INFO @ Sun, 02 Jun 2019 19:08:47: #1 tag size is determined as 50 bps INFO @ Sun, 02 Jun 2019 19:08:47: #1 tag size = 50 INFO @ Sun, 02 Jun 2019 19:08:47: #1 total tags in treatment: 40295645 INFO @ Sun, 02 Jun 2019 19:08:47: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 19:08:47: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 19:08:48: #1 tags after filtering in treatment: 33767961 INFO @ Sun, 02 Jun 2019 19:08:48: #1 Redundant rate of treatment: 0.16 INFO @ Sun, 02 Jun 2019 19:08:48: #1 finished! INFO @ Sun, 02 Jun 2019 19:08:48: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 19:08:48: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 19:08:52: #2 number of paired peaks: 53 WARNING @ Sun, 02 Jun 2019 19:08:52: Too few paired peaks (53) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 02 Jun 2019 19:08:52: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2978704/SRX2978704.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。