=== 000_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 001_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 002_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 003_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 004_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 005_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 006_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 007_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 008_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 009_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 010_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 011_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 012_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 013_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 014_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 015_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 016_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 017_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 018_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 019_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 020_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 021_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 022_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 023_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 024_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 025_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 026_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 027_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 028_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 029_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 030_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 031_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 032_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 033_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 034_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 035_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 036_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 037_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 038_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 039_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 040_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 049_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 050_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 055_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 056_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 057_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 058_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 061_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 062_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 063_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 064_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 065_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 066_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 067_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 069_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 071_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 072_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 075_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 076_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 077_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 078_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 079_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 080_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 081_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 082_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 083_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 085_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 087_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 088_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 089_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 090_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 092_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 093_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 097_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 101_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 107_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 112_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 113_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 114_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 118_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 119_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 120_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 121_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 122_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 125_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 135_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 136_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 137_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 138_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 139_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 140_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 141_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 142_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 143_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === 144_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === i02_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 ) === i03_mapping.tbl.txt.bz2 ##ColumnVariable[id] = extracted tag sequence ##ColumnVariable[library_count] = read count in this library. SUM( rna_count ) = library_count ##ColumnVariable[edit_string] = required edition of the sequence for its matching to the genome ##ColumnVariable[chrom] = the name of the chromosome ##ColumnVariable[strand] = the strand in the chromosome ##ColumnVariable[start] = the starting position of the feature in the chromosome ##ColumnVariable[end] = the ending position of the feature in the chromosome ##ColumnVariable[percentage] = percent match (always 100) ##ColumnVariable[map_pos] = number of locations where this tag sequence mapped to the genome ##ColumnVariable[ribo_flag] = tag mapped to ribosome equal or better than chromosome? ##ColumnVariable[refseq_flag] = tag mapped to refseq better than chromosome? ##ColumnVariable[rna] = RNA name ##ColumnVariable[rna_count] = read count in the RNA ##ColumnVariable[tpm_in_ribo] = tag per million per timecourse including ribosome flagged tags ##ColumnVariable[tpm_ex_ribo] = tag per million per timecourse excluding ribosome_flagged tags ##ColumnVariable[weight] = weight of expression. This is just internal value, and please ignore this column for subsequent analysis ##ColumnVariable[rescue_weight] = weight computed with the 'rescue' strategy ( Faulkner et al. Genomics. 2008 91:281 )