Mascot Search Results

Protein View

Match to: gi|32469711 Score: 1781
GRIP and coiled-coil domain-containing protein 2 (Golgi coiled coil protein GCC185)
Found in search of C:\sequest_txt\034_120403_1.txt

Nominal mass (Mr): 194445; Calculated pI value: 5.07
NCBI BLAST search of gi|32469711 against nr
Unformatted sequence string for pasting into other applications

Taxonomy: Mus musculus

Variable modifications: Acetyl (N-term),Oxidation (M),Propionamide (C),Sulphone (M)
Cleavage by Trypsin: cuts C-term side of KR unless next residue is P
Sequence Coverage: 26%

Matched peptides shown in Bold Red

     1 MEDSAPDAVA AAPSGTPKSK LETLPREDLI KFAKKQMMLL QKAKARCTEL 
    51 DKEVEELKSK PVDGGTDDII KVLTERLDAL LLEKAETEQQ CLCLKKENVK 
   101 MKQEVEDSVT KLEETHKEFE QSHRNYVKEI ESCKNELMAV HSEHSKETAI 
   151 LQKELEEAVH KQVELREQLK SQSDSEDNVR KLQEEIQNIT AAFEEQISCL 
   201 EKKLEATSDE KQQEIIHLQK VIEDKAQHYQ KDINTFQAEI LQLRATHKEE 
   251 VTELMSQIET SAKEHEAEIN KLKENRVTQC EASENIPEKY QCESENLNEV 
   301 ASDASPESQN CSVALQEDPS AEQTVCDKVR QLEDSLKELE SQHSILKDEV 
   351 TYMNNLKLKL EMDAQHIKDE FFHEREDLEF KINELLLAKE EQGYVVEKLK 
   401 YEREDLNRQL CCAVEQHNKE IQRLQEHHQK EVSELSETFI SGSEKEKLAL 
   451 MFEIQGLKEQ CENLQHEKQE VVLNYESLRE MMEILQTELG ESAGKISQEF 
   501 ETMKQQQASD VHELQQKLRS AFNEKDALLE TVNRLQGENE KLLSQQELVP 
   551 ELESTIKNLQ ADNSMYLASL GQKDTMLQEL EAKISSLAKE KDDFISKIKT 
   601 SHEEMDDLHQ KWEREQRLSV ELREAAGQAA QHNSELRQRV SELTGKLDEL 
   651 VREKSQNDQS ITVQMKTMTE DQEALSSKIK SLYEENNRLH SEKAQLSRDL 
   701 EALQAQQDFA HKEHVAEFEK KLQLMVEERD DLNKLLENEQ VQKSFVKTQL 
   751 YEYLKQLRAS ILEENEEEDV VKLIQAVGES LVKVKEEEHN LVFEYDARVL 
   801 ELENKIKCLQ EDSAVQCEEL RTLVRDSEQE KILLRKELDA VTSAKEALQL 
   851 DLLEMKNTNE KASLENQTLS TQVEELSQTL HSRNEVHDEK VLVIEHENLR 
   901 LLLKQRESEL QDVRAELILL KDSLEKSPSV KDQLSLVKEL EEKIESLEKE 
   951 SKDKDEKISK IKLVAVKAKK ELDSNRKEAQ TLREELESVR SEKDRLSASM 
  1001 KEFLQGAESY KSLLLEYDKQ SEQLDVEKER AHNFERHIED LTKQLRNSTC 
  1051 QYERLTSDNE DLLARIETLQ ANAKLLEAQI LEVQKAKGVV EKELDAEELQ 
  1101 KEQKIKEHVS TVNELEELQL QFQKEKKQLQ KTMQELELVK KDAQQTTLMN 
  1151 MEIADYERLM KELNQKLTNK NSTIEDLEQE MKIQKEKQET LQEEITSLQS 
  1201 SVQHYEEKNT KIKQLLVKTK KELADAKQAE TDHLLLQASL KGELEASQQQ 
  1251 VEVYKIQLAE MTSEKHKIHE HLKTSAEQHQ RTLSAYQQRV VALQEESRAA 
  1301 KAEQAAVTSE FESYKVRVHN VLKQQKNKSV SQVETEGAKQ EREHLEMLID 
  1351 QLKIKLQDSQ NSLQISVSEY QTLQAEHDTL LERHNRMLQE TVTKEAELRE 
  1401 KLCSVQSENT MMKSEHSQTM CQLTSQNEAL RTSFRDQVRH LQDEHRKTVE 
  1451 TLQHQLSKLE AQLFQLKSEP STRSPASSHQ PSKSLRERRT TDLPLLDMHT 
  1501 VAREEGEGME TTDSESVSSA GTHIQSLEQL LSSPDTKLER LAETSLWHNE 
  1551 FTKEELAEKL SSTTKSADHL NGLLRETEAT NAILMEQIKL LKSEIRRLER 
  1601 NQEREKSVAN LEYLKNVLLR FIFLKPGSER ERLLPVIDTM LQLSPEEKGK 
  1651 LATVAQGEEE SASRSSGWAS YLHSWSGLR

  Residue Number  Increasing Mass  Decreasing Mass 

 Start - End   Observed  Mr(expt) Mr(calc)   Delta   Miss Sequence
     1 - 18      879.73  1757.44  1756.90     0.54     0  MEDSAPDAVAAAPSGTPK  Acetyl (N-term) (Ions score 48)
    77 - 84      458.68   915.35   914.11     1.24     0  LDALLLEK  (Ions score 51)
   390 - 398     541.57  1081.13  1080.16     0.97     0  EEQGYVVEK  (Ions score 27)
   431 - 445     822.32  1642.62  1641.75     0.87     0  EVSELSETFISGSEK  (Ions score 60)
   469 - 479     676.19  1350.36  1349.51     0.85     0  QEVVLNYESLR  (Ions score 46)
   480 - 495     884.27  1766.53  1766.01     0.52     0  EMMEILQTELGESAGK  (Ions score 73)
   496 - 504     557.50  1112.99  1112.26     0.73     0  ISQEFETMK  (Ions score 55)
   505 - 517     770.62  1539.23  1538.64     0.59     0  QQQASDVHELQQK  (Ions score 72)
   520 - 534     854.53  1707.05  1706.87     0.18     1  SAFNEKDALLETVNR  (Ions score 67)
   526 - 534     516.71  1031.40  1030.15     1.26     0  DALLETVNR  (Ions score 70)
   558 - 573     877.28  1752.54  1752.96    -0.42     0  NLQADNSMYLASLGQK  (Ions score 65)
   600 - 611     735.82  1469.63  1469.55     0.09     0  TSHEEMDDLHQK  (Ions score 43)
   653 - 666     819.10  1636.19  1635.81     0.38     1  EKSQNDQSITVQMK  (Ions score 58)
   667 - 678     671.26  1340.50  1339.44     1.07     0  TMTEDQEALSSK  (Ions score 51)
   699 - 712     808.28  1614.54  1613.75     0.79     0  DLEALQAQQDFAHK  (Ions score 66)
   759 - 772     802.98  1603.94  1603.70     0.23     0  ASILEENEEEDVVK  (Ions score 57)
   773 - 783     579.45  1156.89  1156.39     0.50     0  LIQAVGESLVK  (Ions score 48)
   784 - 798     940.08  1878.13  1878.03     0.11     1  VKEEEHNLVFEYDAR  (Ions score 70)
   837 - 845     933.79   932.78   933.03    -0.24     0  ELDAVTSAK  (Ions score 24)
   862 - 883     825.08  2472.23  2471.66     0.57     0  ASLENQTLSTQVEELSQTLHSR  (Ions score 39)
   891 - 900     612.05  1222.08  1221.42     0.66     0  VLVIEHENLR  (Ions score 54)
  1075 - 1085    642.91  1283.80  1283.53     0.26     0  LLEAQILEVQK  (Ions score 50)
  1171 - 1182    719.37  1436.73  1436.55     0.18     0  NSTIEDLEQEMK  (Ions score 45)
  1228 - 1241    784.52  1567.03  1566.78     0.25     0  QAETDHLLLQASLK  (Ions score 42)
  1242 - 1255    805.28  1608.55  1607.74     0.81     0  GELEASQQQVEVYK  (Ions score 61)
  1302 - 1315    780.87  1559.72  1559.65     0.07     0  AEQAAVTSEFESYK  (Ions score 73)
  1318 - 1323    709.63   708.62   708.86    -0.24     0  VHNVLK  (Ions score 41)
  1329 - 1339    568.85  1135.68  1134.21     1.47     0  SVSQVETEGAK  (Ions score 40)
  1343 - 1353    685.83  1369.65  1368.61     1.04     0  EHLEMLIDQLK  (Ions score 46)
  1448 - 1458    643.07  1284.13  1283.45     0.69     0  TVETLQHQLSK  (Ions score 58)
  1459 - 1467    546.29  1090.57  1089.30     1.27     0  LEAQLFQLK  (Ions score 54)
  1490 - 1503    792.68  1583.35  1582.84     0.51     0  TTDLPLLDMHTVAR  (Ions score 67)
  1541 - 1553    789.25  1576.48  1575.74     0.74     0  LAETSLWHNEFTK  (Ions score 45)
  1566 - 1575    548.97  1095.92  1095.22     0.70     0  SADHLNGLLR  (Ions score 40)
  1576 - 1589    796.47  1590.92  1590.81     0.11     0  ETEATNAILMEQIK  (Ions score 45)
  1651 - 1664    725.41  1448.81  1447.52     1.29     0  LATVAQGEEESASR  (Ions score 70)

Error Distribution


LOCUS Q8CHG3 1679 aa linear ROD 15-MAR-2004 DEFINITION GRIP and coiled-coil domain-containing protein 2 (Golgi coiled coil protein GCC185). ACCESSION Q8CHG3 VERSION Q8CHG3 GI:32469711 DBSOURCE swissprot: locus GCC2_MOUSE, accession Q8CHG3; class: standard. extra accessions:Q8BR44,Q8R2Q5,Q9CT45,created: Oct 10, 2003. sequence updated: Oct 10, 2003. annotation updated: Mar 15, 2004. xrefs: gi: 20073166, gi: 20073167, gi: 12847177, gi: 26373270, gi: 26337554, gi: 26337555, gi: 26006146, gi: 26006147, gi: 91735 xrefs (non-sequence databases): MGI1917547, InterProIPR000237, InterProIPR002017, PfamPF01465, PROSITEPS50913 KEYWORDS Golgi stack; Coiled coil. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. REFERENCE 1 (residues 1 to 1679) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S.N., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J.M. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) MEDLINE 22388257 PUBMED 12477932 REMARK SEQUENCE OF 1-769 FROM N.A. TISSUE=Breast cancer REFERENCE 2 (residues 1 to 1679) AUTHORS Okazaki,Y., Furuno,M., Kasukawa,T., Adachi,J., Bono,H., Kondo,S., Nikaido,I., Osato,N., Saito,R., Suzuki,H., Yamanaka,I., Kiyosawa,H., Yagi,K., Tomaru,Y., Hasegawa,Y., Nogami,A., Schonbach,C., Gojobori,T., Baldarelli,R., Hill,D.P., Bult,C., Hume,D.A., Quackenbush,J., Schriml,L.M., Kanapin,A., Matsuda,H., Batalov,S., Beisel,K.W., Blake,J.A., Bradt,D., Brusic,V., Chothia,C., Corbani,L.E., Cousins,S., Dalla,E., Dragani,T.A., Fletcher,C.F., Forrest,A., Frazer,K.S., Gaasterland,T., Gariboldi,M., Gissi,C., Godzik,A., Gough,J., Grimmond,S., Gustincich,S., Hirokawa,N., Jackson,I.J., Jarvis,E.D., Kanai,A., Kawaji,H., Kawasawa,Y., Kedzierski,R.M., King,B.L., Konagaya,A., Kurochkin,I.V., Lee,Y., Lenhard,B., Lyons,P.A., Maglott,D.R., Maltais,L., Marchionni,L., McKenzie,L., Miki,H., Nagashima,T., Numata,K., Okido,T., Pavan,W.J., Pertea,G., Pesole,G., Petrovsky,N., Pillai,R., Pontius,J.U., Qi,D., Ramachandran,S., Ravasi,T., Reed,J.C., Reed,D.J., Reid,J., Ring,B.Z., Ringwald,M., Sandelin,A., Schneider,C., Semple,C.A., Setou,M., Shimada,K., Sultana,R., Takenaka,Y., Taylor,M.S., Teasdale,R.D., Tomita,M., Verardo,R., Wagner,L., Wahlestedt,C., Wang,Y., Watanabe,Y., Wells,C., Wilming,L.G., Wynshaw-Boris,A., Yanagisawa,M., Yang,I., Yang,L., Yuan,Z., Zavolan,M., Zhu,Y., Zimmer,A., Carninci,P., Hayatsu,N., Hirozane-Kishikawa,T., Konno,H., Nakamura,M., Sakazume,N., Sato,K., Shiraki,T., Waki,K., Kawai,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashizume,W., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Miyazaki,A., Sakai,K., Sasaki,D., Shibata,K., Shinagawa,A., Yasunishi,A., Yoshino,M., Waterston,R., Lander,E.S., Rogers,J., Birney,E. and Hayashizaki,Y. TITLE Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs JOURNAL Nature 420 (6915), 563-573 (2002) MEDLINE 22354683 PUBMED 12466851 REMARK SEQUENCE OF 1-442 FROM N.A. STRAIN=C57BL/6J; TISSUE=Brain, and Embryo REFERENCE 3 (residues 1 to 1679) AUTHORS Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Aizawa,H., Yuasa,S., Nakajima,D., Nagase,T., Ohara,O. and Koga,H. TITLE Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries JOURNAL DNA Res. 10 (1), 35-48 (2003) MEDLINE 22579291 PUBMED 12693553 REMARK SEQUENCE OF 49-1679 FROM N.A. TISSUE=Brain COMMENT ------------------------------------------------------------------- This SWISS-PROT entry is copyright. It is produced through a collaboration between the Swiss Institute of Bioinformatics and the EMBL outstation - the European Bioinformatics Institute. The original entry is available from http://www.expasy.ch/sprot and http://www.ebi.ac.uk/sprot ------------------------------------------------------------------. [FUNCTION] Probably involved in maintaining Golgi structure (By similarity). [SUBCELLULAR LOCATION] Cytoplasmic; peripheral membrane protein associated with the trans-Golgi network (By similarity). [DOMAIN] Extended rod-like protein with coiled-coil domains. [SIMILARITY] Belongs to the golgin family. [SIMILARITY] Contains 1 GRIP domain. FEATURES Location/Qualifiers source 1..1679 /organism="Mus musculus" /db_xref="taxon:10090" gene 1..1679 /gene="GCC2" /note="synonym: KIAA0336" Protein 1..1679 /gene="GCC2" /product="GRIP and coiled-coil domain-containing protein 2" Region 31..1613 /gene="GCC2" /region_name="Domain" /note="Coiled coil (Potential)." Region 83..501 /gene="GCC2" /region_name="Domain" /note="Glu-rich." Region 440 /gene="GCC2" /region_name="Conflict" /note="I -> M (in Ref. 2)." Region 1604..1654 /gene="GCC2" /region_name="Domain" /note="GRIP."

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