Match to: gi|24429590 Score: 137 DEAH (Asp-Glu-Ala-His) box polypeptide 9; D-E-A-D (aspartate-glutamate-alanine-aspartate) box polypeptide 9; DEAD (aspartate-glutamate-alanine-aspartate) box p Found in search of C:\Xcalibur\sequest\059_B071604_34.txt Nominal mass (Mr): 149583; Calculated pI value: 6.48 NCBI BLAST search of gi|24429590 against nr Unformatted sequence string for pasting into other applications Taxonomy: Mus musculus Links to retrieve other entries containing this sequence from NCBI Entrez: gi|3913434 from Mus musculus gi|2961456 from Mus musculus Variable modifications: Acetyl (N-term),Oxidation (M),Propionamide (C),Sulphone (M) Cleavage by Trypsin: cuts C-term side of KR unless next residue is P Sequence Coverage: 2% Matched peptides shown in Bold Red 1 MGDIKNFLYA WCGKRKMTPA YEIRAVGNKN RQKFMCEVRV EGFNYRGMGN 51 STNKKDAQSN AARDFVNYLV RINEVKSEEV PAVGIVPPPP ILSDTSDSTA 101 SAAEGLPAPM GGPLPPHLAL KAEENNSGVE SSGYGAPGPT WDRGANLKDY 151 YSRKEEQEVQ ATLESEEVDL NAGLHGNWTL ENAKARLNHY FQKEKIQGEY 201 KYTQVGPDHN RSFIAEMTIY IKQLGRRIFA REHGCNKKLA AQSCALSLVR 251 QLYHLGCIEA YSGLTKKKEG ERVEPYKVFL PPDLELQLQN VVQELDLEIV 301 PPPVDPSMPV ILNIGKLAHF EPSQRQNAVG VVPWSPPQSN WNPWTSSNID 351 EGPLAYASTE QISMDLKNEL TYQMEQDHNL QSVLQERELL PVKKFEAEIL 401 EAISSNSVVI IRGATGCGKT TQVPQYILDD FIQNDRAAEC NIVVTQPRRI 451 SAVAVAERVA YERGEEPGKS CGYSVRFESI LPRPHASIMF CTVGVLLRKL 501 EAGIRGISHV IVDEIHERDI NTDFLLVVLR DVVLAYPEVR IVLMSATIDT 551 TMFCEYFFNC PIIEVYGRTF PVQEYFLEDC IQMTQFIPPP KDKKKKDKED 601 DGGEDDDANC NLICGDEYGP ETKLSMSQLN EKETPFELIE ALLKYIETLN 651 VPGAVLVFLP GWNLIYTMQK HLENNSHFGS HRYQILPLHS QIPREEQRKV 701 FDPVPDGVTK VILSTNIAET SITINDVVYV IDSCKQKVKL FTAHNNMTNY 751 ATVWASKTNL EQRKGRAGRV RPGFCFHLCS RARFDRLETH MTPEMFRTPL 801 HEIALSIKLL RLGGIGQFLA KAIEPPPLDA IIEAEHTLRE LDALDANDEL 851 TPLGRILAKL PIEPRFGKMM IMGCIFYVGD AVCTISAATC FPEPFISEGK 901 RLGYIHRNFA GNRFSDHVAL LSVFQAWDDA RMSGEEAEIR FCEQKRLNMA 951 TLRMTWEAKV QLKEILINSG FPEDCLLTQV FTNTGPDNNL DVVISLLAFG 1001 VYPNVCYHKE KRKILTTEGR NALIHKSSVN CPFSSQDMKY PSPFFVFGEK 1051 IRTRAISAKG MTLVTPLQLL LFASKKVQSD GQIVFIDDWI RLQISHEAAA 1101 CITIRAAMEA LVVEVSKQPN IISQLDPVNE HMLNTIRQIS RPSAAGINLM 1151 IGSVRYGDGP RPPKMARYDN GSGYRRGYGG GGYGGGGYGG GYGSGGFGGG 1201 FGSGGGFGGG FNSGGGGFGS GGGGFGSGGG GFGGGGGGFS GGGGGGFGGG 1251 RGGGGGGFGG SGGFGNGGGG YGVGGGGYGG GGGGGYGGGS GGYGGGGYGG 1301 GEGYSISPNS YRGNYGGGGG GYRGGSQGGY RNNFGGDYRG SSGDYRGSGG 1351 GYRGSGGFQR RGYGGGYFGQ GRGGGGGGGY
Residue Number Increasing Mass Decreasing Mass
Start - End Observed Mr(expt) Mr(calc) Delta Miss Sequence 317 - 325 543.35 1084.68 1084.20 0.48 0 LAHFEPSQR (Ions score 26) 798 - 808 611.66 1221.30 1221.46 -0.16 0 TPLHEIALSIK (Ions score 63) 1040 - 1050 659.71 1317.40 1317.51 -0.11 0 YPSPFFVFGEK (Ions score 50) LOCUS NP_031868 1380 aa linear ROD 18-FEB-2004 DEFINITION DEAH (Asp-Glu-Ala-His) box polypeptide 9; D-E-A-D (aspartate-glutamate-alanine-aspartate) box polypeptide 9; DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide 9; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 9; leukophysin; RNA helicase; nuclear DNA helicase II [Mus musculus]. ACCESSION NP_031868 VERSION NP_031868.1 GI:24429590 DBSOURCE REFSEQ: accession NM_007842.1 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. REFERENCE 1 (residues 1 to 1380) AUTHORS Lee,C.G., Eki,T., Okumura,K., da Costa Soares,V. and Hurwitz,J. TITLE Molecular analysis of the cDNA and genomic DNA encoding mouse RNA helicase A JOURNAL Genomics 47 (3), 365-371 (1998) PUBMED 9480750 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from U91922.1. FEATURES Location/Qualifiers source 1..1380 /organism="Mus musculus" /strain="129/Sv" /db_xref="taxon:10090" /chromosome="1" /map="1 77.0 cM" Protein 1..1380 /product="DEAH (Asp-Glu-Ala-His) box polypeptide 9" /note="D-E-A-D (aspartate-glutamate-alanine-aspartate) box polypeptide 9; DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide 9; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 9; leukophysin; RNA helicase; nuclear DNA helicase II" Region 3..1170 /region_name="Dosage compensation complex, subunit MLE [Transcription]" /note="KOG0921" /db_xref="CDD:18714" Region 5..69 /region_name="Double-stranded RNA binding motif" /note="DSRM" /db_xref="CDD:24260" Region 183..253 /region_name="Double-stranded RNA binding motif" /note="DSRM" /db_xref="CDD:24260" Region 384..575 /region_name="DEAD-like helicases superfamily" /note="DEXDc" /db_xref="CDD:24291" Region 677..770 /region_name="helicase superfamily c-terminal domain" /note="HELICc" /db_xref="CDD:24292" Region 833..922 /region_name="Helicase associated domain (HA2)" /note="HA2" /db_xref="CDD:26244" CDS 1..1380 /gene="Dhx9" /coded_by="NM_007842.1:108..4250" /note="go_component: intracellular [goid 0005622] [evidence IEA]; go_component: nucleus [goid 0005634] [evidence IEA]; go_function: DNA binding [goid 0003677] [evidence IEA]; go_function: nucleic acid binding [goid 0003676] [evidence IEA]; go_function: RNA binding [goid 0003723] [evidence IEA]; go_function: double-stranded RNA binding [goid 0003725] [evidence IEA]; go_function: helicase activity [goid 0004386] [evidence IEA]; go_function: ATP binding [goid 0005524] [evidence IEA]; go_function: ATP dependent helicase activity [goid 0008026] [evidence IEA]; go_function: RNA helicase activity [goid 0003724] [evidence IEA]" /db_xref="GeneID:13211" /db_xref="LocusID:13211" /db_xref="MGI:108177"