Mascot Search Results

Protein View

Match to: gi|26326639 Score: 217
unnamed protein product [Mus musculus]
Found in search of C:\sequest_txt\037_122503_9.txt

Nominal mass (Mr): 76579; Calculated pI value: 5.38
NCBI BLAST search of gi|26326639 against nr
Unformatted sequence string for pasting into other applications

Taxonomy: Mus musculus

Variable modifications: Acetyl (N-term),Oxidation (M),Propionamide (C),Sulphone (M)
Cleavage by Trypsin: cuts C-term side of KR unless next residue is P
Sequence Coverage: 9%

Matched peptides shown in Bold Red

     1 MTPSQVTFEI RGTLLPGEVF AICGSCDALG NWNPQNAVAL INENETGDSV 
    51 LWKAVIALNR GVSVKYRYFR GCFLEPKTIG GPCQVIVHKW ETHLQPRSIT 
   101 PLESEIIIDD GQFGIHNGVE TLDSGWLTCQ TEIRLRLHFS EKPPVSISKK 
   151 KFKKSRFRVK LTLEGLEEDE DDDDDKVSPT VLHKMSNSLE ISLISDNEFK 
   201 CRHSQPECGY GLQPDRWTEY SIQTMEPDNL ELIFDFFEED LSEHVVQGDV 
   251 LPGHVGTACL LSSTIAESGR SAGILTLPIM SRNSRKTIGK VRVDFIIIKP 
   301 LPGYSCSMQS SFSKYWKPRI PLDVGHRGAG NSTTTAKLAK VQENTIASLR 
   351 NAASHGAAFV EFDVHLSKDF VPVVYHDLTC CLTMKRKYEA DPVELFEIPV 
   401 KELTFDQLQL LKLSHVTALK TKDRKQSLYE EENFFSENQP FPSLKMVLES 
   451 LPENVGFNIE IKWICQHRDG VWDGNLSTYF DMNVFLDIIL KTVLENSGKR 
   501 RIVFSSFDAD ICTMVRQKQN KYPILFLTQG KSDIYPELMD LRSRTTPIAM 
   551 SFAQFENILG INAHTEDLLR NPSYVQEAKA KGLVIFCWGD DTNDPENRRK 
   601 LKEFGVNGLI YDRIYDWMPE QPNIFQVEQL ERLKQELPEL KNCLCPTVSH 
   651 FIPSSFCVEP DIHVDANGID SVENA

  Residue Number  Increasing Mass  Decreasing Mass 

 Start - End   Observed  Mr(expt) Mr(calc)   Delta   Miss Sequence
    90 - 97      534.45  1066.89  1066.18     0.70     0  WETHLQPR  (Ions score 47)
   161 - 184     905.53  2713.56  2712.86     0.70     1  LTLEGLEEDEDDDDDKVSPTVLHK  (Ions score 32)
   341 - 350     566.36  1130.70  1130.27     0.44     0  VQENTIASLR  (Ions score 43)
   402 - 412     674.90  1347.78  1347.57     0.20     0  ELTFDQLQLLK  (Ions score 60)
   633 - 641     550.07  1098.12  1097.32     0.80     1  LKQELPELK  (Ions score 37)

Error Distribution


LOCUS BAC27063 675 aa linear ROD 03-APR-2004 DEFINITION unnamed protein product [Mus musculus]. ACCESSION BAC27063 VERSION BAC27063.1 GI:26326639 DBSOURCE accession AK030645.1 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. REFERENCE 1 AUTHORS Carninci,P. and Hayashizaki,Y. TITLE High-efficiency full-length cDNA cloning JOURNAL Meth. Enzymol. 303, 19-44 (1999) MEDLINE 99279253 PUBMED 10349636 REFERENCE 2 AUTHORS Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K., Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y. TITLE Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes JOURNAL Genome Res. 10 (10), 1617-1630 (2000) MEDLINE 20499374 PUBMED 11042159 REFERENCE 3 AUTHORS Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N., Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T., Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M., Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S., Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y., Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K., Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M., Inoue,Y., Kira,A. and Hayashizaki,Y. TITLE RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer JOURNAL Genome Res. 10 (11), 1757-1771 (2000) MEDLINE 20530913 PUBMED 11076861 REFERENCE 4 AUTHORS The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium. TITLE Functional annotation of a full-length mouse cDNA collection JOURNAL Nature 409, 685-690 (2001) REFERENCE 5 AUTHORS The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I & II Team. TITLE Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs JOURNAL Nature 420, 563-573 (2002) REFERENCE 6 (residues 1 to 675) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Bono,H., Carninci,P., Fukuda,S., Furuno,M., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hirozane,T., Hori,F., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kasukawa,T., Katoh,H., Kawai,J., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numazaki,R., Ohno,M., Ohsato,N., Okazaki,Y., Saito,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Takeda,Y., Tanaka,T., Tomaru,A., Toya,T., Yasunishi,A., Muramatsu,M. and Hayashizaki,Y. TITLE Direct Submission JOURNAL Submitted (16-JUL-2001) Yoshihide Hayashizaki, The Institute of Physical and Chemical Research (RIKEN), Laboratory for Genome Exploration Research Group, RIKEN Genomic Sciences Center (GSC), RIKEN Yokohama Institute; 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan (E-mail:genome-res@gsc.riken.jp, URL:http://genome.gsc.riken.jp/, Tel:81-45-503-9222, Fax:81-45-503-9216) COMMENT cDNA library was prepared and sequenced in Mouse Genome Encyclopedia Project of Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in RIKEN. Division of Experimental Animal Research in Riken contributed to prepare mouse tissues. Please visit our web site for further details. URL:http://genome.gsc.riken.jp/ URL:http://fantom.gsc.riken.jp/. FEATURES Location/Qualifiers source 1..675 /organism="Mus musculus" /strain="C57BL/6J" /db_xref="FANTOM_DB:5430401O18" /db_xref="taxon:10090" /clone="5430401O18" /tissue_type="head" /clone_lib="RIKEN full-length enriched mouse cDNA library" /dev_stage="6 days neonate" Protein 1..675 /name="unnamed protein product" CDS 1..675 /coded_by="AK030645.1:157..2184" /note="hypothetical Glycerophosphoryl diester phosphodiesterase/Glycosyl hydrolase, starch-binding domain containing protein (InterPro|IPR004129, InterPro|IPR002044, evidence: InterPro) putative"

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