Match to: gi|28077067 Score: 149 tubulin-specific chaperone d [Mus musculus] Found in search of C:\Xcalibur\sequest\060_B072704_2.txt Nominal mass (Mr): 133321; Calculated pI value: 6.08 NCBI BLAST search of gi|28077067 against nr Unformatted sequence string for pasting into other applications Taxonomy: Mus musculus Links to retrieve other entries containing this sequence from NCBI Entrez: gi|26334501 from Mus musculus gi|37604160 from Mus musculus Variable modifications: Acetyl (N-term),Oxidation (M),Propionamide (C),Sulphone (M) Cleavage by Trypsin: cuts C-term side of KR unless next residue is P Sequence Coverage: 2% Matched peptides shown in Bold Red 1 MVLSNEPAAS AAEEEVEDDA LVRASALEAF GESAETRALL RSLPAVHRER 51 ASREVAEERF RVIMDKYQEQ PHLLDPHLEW MMNSLLDLVQ DETSLPDLVH 101 LAFKFLYIIT KVRGYKVFLR LFPHEVANVQ PVLDMFTGQN PKDHETWETR 151 YMLLLWLSVT CLIPFDFSRL DGNLSTQTGE TRVPTMDRIL QIAESYLVVS 201 DKARDAAAVL VSKFITRPDV KQRKMASFLD WSLCTLAHSS FQTIEGVITM 251 DGMLQALAQI FKHGKREDCL PYANTVLQCL DGCRLPESSH TSLRKLGVKL 301 VQRLGLTFLK PKVATWRYQR GCRSLAANLK LCAPGKSDQK LLSDSLTSDG 351 DEDYDVPEGV ETVIEQLLVG LKDKDTVVRW SAAKGIGRMA GRLPRELADD 401 VVGSVLDCFS FQETDKAWHG GCLALAELGR RGLLLPSRLS EVVTVILKAL 451 TYDEKRGACS VGANVRDAAC YVCWAFARAY EPQELTPFVT AISSALVIAA 501 VFDRNVNCRR AASAAFQENV GRQGTFPHGI DILTTADYFA VGNISNCFLI 551 ISVFIAGFQE YTKPMIDHLV SMKINHWDGA IRELSAKALH NLTPQVPEYI 601 AMHVFPALLL MTQSPDLHTR HGAILACAEV TYALYKLATQ SNRLVTDYLD 651 EKAVQSLKQI HQQLCDRHLY RGLGGELMRQ AVCILIEKLS LSRMPFKGDA 701 TVEGWQWLIN DTLRSLHLVS SHSRQQIKEV AVSALTALCS EYYVKEPGEA 751 GSSIAKELIP QYLAELQSPE EMARCGFSSA LGALPGFLLR GHLQQVLSGL 801 RRVTCISPND VSFAEARRDG LKAISRICQT VGVNTRGPPD EVICKENISE 851 VYAALLGCMS DYTTDSRGDV GAWVREAAMT SLMDLMLLLA RTEPVLIEAH 901 ICERVMCCVA QQASEKIDRF RAHAARVFLT LLHFDSPPIP HVPHRQELES 951 LFPRSDVATV NWNAPSQAFP LITQLLGLPT YRYHVLLGLA VSVGGLTEST 1001 VRHSTQSLFE YMKGIQKDAQ VLQSFSETLL KVFEDNLLND RVSVSLLKML 1051 DQLLANGCFD IFTAEENHPF CVKLLTLCKE EIKKSKDIQK LRSSIAVLCG 1101 MVQFNGDVRK KILLQLFLLL GHPFPVIRKS TASQVYEMVL TYSDLVDAEV 1151 LDEVMSVLSD TAWDAELPVV REQRNRLCDL LGVPRPQLVP KPIPGS
Residue Number Increasing Mass Decreasing Mass
Start - End Observed Mr(expt) Mr(calc) Delta Miss Sequence 24 - 37 720.36 1438.70 1438.51 0.19 0 ASALEAFGESAETR (Ions score 92) 170 - 182 696.84 1391.66 1391.46 0.20 0 LDGNLSTQTGETR (Ions score 65) LOCUS NP_084154 1196 aa linear ROD 16-MAR-2004 DEFINITION tubulin-specific chaperone d [Mus musculus]. ACCESSION NP_084154 VERSION NP_084154.1 GI:28077067 DBSOURCE REFSEQ: accession NM_029878.1 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. REFERENCE 1 (residues 1 to 1196) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 AUTHORS The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I & II Team. TITLE Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs JOURNAL Nature 420, 563-573 (2002) REFERENCE 3 AUTHORS The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium. TITLE Functional annotation of a full-length mouse cDNA collection JOURNAL Nature 409, 685-690 (2001) COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK041464.1. FEATURES Location/Qualifiers source 1..1196 /organism="Mus musculus" /strain="C57BL/6J" /db_xref="taxon:10090" /chromosome="11" Protein 1..1196 /product="tubulin-specific chaperone d" Region 26..1193 /region_name="Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones]" /note="KOG1943" /db_xref="CDD:19729" Region 63..921 /region_name="Beta-tubulin cofactor D" /note="B-tub_coD" /db_xref="CDD:16369" CDS 1..1196 /gene="Tbcd" /coded_by="NM_029878.1:45..3635" /db_xref="GeneID:108903" /db_xref="LocusID:108903" /db_xref="MGI:1919686"