Mascot Search Results

Protein View

Match to: gi|14210106 Score: 155
ribosomal protein L6 [Mus musculus]
Found in search of C:\Xcalibur\sequest\061_A080604_14.txt

Nominal mass (Mr): 33510; Calculated pI value: 10.69
NCBI BLAST search of gi|14210106 against nr
Unformatted sequence string for pasting into other applications

Taxonomy: Mus musculus

Variable modifications: Acetyl (N-term),Oxidation (M),Propionamide (C),Sulphone (M)
Cleavage by Trypsin: cuts C-term side of KR unless next residue is P
Sequence Coverage: 10%

Matched peptides shown in Bold Red

     1 MAGEKAPDTK EKKPAAKKAG SDAAASRPRA AKVAKKVHPK GKKPKKAKPH 
    51 CSRNPVLVRG IGRYSRSAMY SRKALYKRKY SAAKTKVEKK KKKEKVLATV 
   101 TKTVGGDKNG GTRVVKLRKM PRYYPTEDVP RKLLSHGKKP FSQHVRRLRS 
   151 SITPGTVLII LTGRHRGKRV VFLKQLDSGL LLVTGPLVIN RVPLRRTHQK 
   201 FVIATSTKVD ISDVKIPKHL TDAYFKKKQL RKPRHQEGEI FDTEKEKYEI 
   251 TEQRKADQKA VDLQILPKIK AVPQLQGYLR SQFSLTNGMY PHKLVF

  Residue Number  Increasing Mass  Decreasing Mass 

 Start - End   Observed  Mr(expt) Mr(calc)   Delta   Miss Sequence
   119 - 131     570.82  1709.43  1709.94    -0.51     2  KMPRYYPTEDVPR  Acetyl (N-term); Oxidation (M) (Ions score 35)
   123 - 131     570.82  1139.61  1139.23     0.38     0  YYPTEDVPR  (Ions score 40)
   175 - 191     905.10  1808.19  1808.15     0.04     0  QLDSGLLLVTGPLVINR  (Ions score 83)

Error Distribution


LOCUS AAK56936 296 aa linear ROD 27-MAY-2001 DEFINITION ribosomal protein L6 [Mus musculus]. ACCESSION AAK56936 VERSION AAK56936.1 GI:14210106 DBSOURCE locus AF374195 accession AF374195.1 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. REFERENCE 1 (residues 1 to 296) AUTHORS Wang,J.-S., Han,H., Yang,X., Li,R. and Zhou,P. TITLE Direct Submission JOURNAL Submitted (25-APR-2001) Department of Medical Genetics and Developmental Biology, The Fourth Military Medical University, 17 Changle West Road, Xi'an, Shaanxi 710032, P. R. China COMMENT Method: conceptual translation. FEATURES Location/Qualifiers source 1..296 /organism="Mus musculus" /strain="129/Sv" /db_xref="taxon:10090" Protein 1..296 /product="ribosomal protein L6" CDS 1..296 /gene="Rpl6" /coded_by="join(AF374195.1:1464..1721, AF374195.1:1812..1913,AF374195.1:2712..2855, AF374195.1:3191..3239,AF374195.1:4440..4624, AF374195.1:4831..4983)"

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