Mascot Search Results

Protein View

Match to: gi|6681147 Score: 187
dynactin 1; dynactin 1, retrograde axonal transport [Mus musculus]
Found in search of C:\Xcalibur\sequest\059_B071604_34.txt

Nominal mass (Mr): 141724; Calculated pI value: 5.72
NCBI BLAST search of gi|6681147 against nr
Unformatted sequence string for pasting into other applications

Taxonomy: Mus musculus
Links to retrieve other entries containing this sequence from NCBI Entrez:
gi|3023674 from Mus musculus
gi|7513637 from Mus musculus
gi|2104495 from Mus musculus

Variable modifications: Acetyl (N-term),Oxidation (M),Propionamide (C),Sulphone (M)
Cleavage by Trypsin: cuts C-term side of KR unless next residue is P
Sequence Coverage: 4%

Matched peptides shown in Bold Red

     1 MAQSRRHMSS RTPSGSRMST EASARPLRVG SRVEVIGKGH RGTVAYVGAT 
    51 LFATGKWVGV ILDEAKGKND GTVQGRKYFT CDEGHGIFVR QSQIQVFEDG 
   101 ADTTSPETPD SSASKVLKRE GADAAAKTSK LRGLKPKKAP TARKTTTRRP 
   151 KPTRPASTGV AGPSSSLGPS GSASAGELSS SEPSTPAQTP LAAPIIPTPA 
   201 LTSPGAAPPL PSPSKEEEGL RAQVRDLEEK LETLRLKRSE DKAKLKELEK 
   251 HKIQLEQVQE WKSKMQEQQA DLQRRLKEAR KEAKEALEAK ERYMEEMADT 
   301 ADAIEMATLD KEMAEERAES LQQEVEALKE RVDELTTDLE ILKAEIEEKG 
   351 SDGAASSYQL KQLEEQNARL KDALVRMRDL SSSEKQEHVK LQKLMEKKNQ 
   401 ELEVVRQQRE RLQEELSQAE STIDELKEQV DAALGAEEMV EMLTDRNLNL 
   451 EEKVRELRET VGDLEAMNEM NDXLQENARE TELELREQLD MAGARVREAQ 
   501 KRVEAAQETV ADYQQTIKKY RQLTAHLQDV NRELTNQQEA SVERQQQPPP 
   551 ETFDFKIKFA ETKAHAKAIE MELRQMEVAQ ANRHMSLLTA FMPDSFLRPG 
   601 GDHDCVLVLL LMPRLICKAE LIRKQAQEKF DLSENCSERP GLRGAAGEQL 
   651 SFAAGLVYSL SLLQATLHRY EHALSQCSVD VYKKVGSLYP EMSAHERSLD 
   701 FLIELLHKDQ LDETVNVEPL NKGIKYYQHL YRIHLAEQPE DSTMQLADHI 
   751 KFTQSALDCM GVEVGRLRAF LQGGQEATDI ALLLRDLETS CSDTRQFCKK 
   801 IRRRMPGTDA PGIPAALAFG SQVSDTLLDC RKHLTWVVAV LQEVAAAAAQ 
   851 LIAPLAENEG LPVAALEELA FKASEQIYGS PSSSPYECLR QSCTILISTM 
   901 NKLATAMQEG EYDAERPPSK PPPVELRAAA LRAEITDAEG LGLKLEDRET 
   951 VIKELKKSLK IKGEELSEAN VRXSLLEKKL DSAAKDADER IEKVQTRLDE 
  1001 TQTLLRKKEK DFEETMDALQ ADIDQLEAEK AELKQRLNSQ SKRTIEGLRG 
  1051 PPPSGIATLV SGIAGEEPQR GGAPGQAPGA LPGPGLVKDS PLLLQQISAM 
  1101 RLHISQLQHE NSILRGAQMK ASLAALPPLH VAKLSLPPHE GPGGNLVAGA 
  1151 LYRKTSQLLE KLNQLSTHTH VVDITRSSPA AKSPSAQLME QVAQLKSLSD 
  1201 TIEKLKDEVL KETVTQRPGA TVPTDFATFP SSAFLRAKEE QQDDTVYMGK 
  1251 VTFSCAAGLG QRHRLVLTQE QLHQLHSRLI S

  Residue Number  Increasing Mass  Decreasing Mass 

 Start - End   Observed  Mr(expt) Mr(calc)   Delta   Miss Sequence
    91 - 115    1314.06  2626.10  2625.70     0.41     0  QSQIQVFEDGADTTSPETPDSSASK  (Ions score 67)
   350 - 361     592.78  1183.54  1183.24     0.30     0  GSDGAASSYQLK  (Ions score 43)
   533 - 544     702.71  1403.40  1403.47    -0.07     0  ELTNQQEASVER  (Ions score 43)
  1121 - 1133    644.83  1287.65  1287.57     0.08     0  ASLAALPPLHVAK  (Ions score 46)

Error Distribution


LOCUS NP_031861 1281 aa linear ROD 24-DEC-2003 DEFINITION dynactin 1; dynactin 1, retrograde axonal transport [Mus musculus]. ACCESSION NP_031861 VERSION NP_031861.1 GI:6681147 DBSOURCE REFSEQ: accession NM_007835.1 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. REFERENCE 1 (residues 1 to 1281) AUTHORS Jang,W., Weber,J.S., Tokito,M.K., Holzbaur,E.L. and Meisler,M.H. TITLE Mouse p150Glued (dynactin 1) cDNA sequence and evaluation as a candidate for the neuromuscular disease mutation mnd2 JOURNAL Biochem. Biophys. Res. Commun. 231 (2), 344-347 (1997) PUBMED 9070275 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from U60312.1. FEATURES Location/Qualifiers source 1..1281 /organism="Mus musculus" /strain="C57BL/6J" /db_xref="taxon:10090" /chromosome="6" /map="6 34.9 cM" Protein 1..1281 /product="dynactin 1" /note="dynactin 1, retrograde axonal transport" Region 22..>134 /region_name="Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]" /note="KOG0971" /db_xref="CDD:18764" Region 48..90 /region_name="CAP-Gly domain" /note="CAP_GLY" /db_xref="CDD:4486" Region 215..1242 /region_name="Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]" /note="KOG0971" /db_xref="CDD:18764" CDS 1..1281 /gene="Dctn1" /coded_by="NM_007835.1:20..3865" /note="go_component: dynein complex [goid 0030286] [evidence IEA]; go_component: cytoskeleton [goid 0005856] [evidence IEA]; go_component: kinesin complex [goid 0005871] [evidence IEA]; go_function: motor activity [goid 0003774] [evidence IEA]; go_process: microtubule-based process [goid 0007017] [evidence IEA]" /db_xref="GeneID:13191" /db_xref="LocusID:13191" /db_xref="MGI:107745"

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