Match to: gi|6681147 Score: 187 dynactin 1; dynactin 1, retrograde axonal transport [Mus musculus] Found in search of C:\Xcalibur\sequest\059_B071604_34.txt Nominal mass (Mr): 141724; Calculated pI value: 5.72 NCBI BLAST search of gi|6681147 against nr Unformatted sequence string for pasting into other applications Taxonomy: Mus musculus Links to retrieve other entries containing this sequence from NCBI Entrez: gi|3023674 from Mus musculus gi|7513637 from Mus musculus gi|2104495 from Mus musculus Variable modifications: Acetyl (N-term),Oxidation (M),Propionamide (C),Sulphone (M) Cleavage by Trypsin: cuts C-term side of KR unless next residue is P Sequence Coverage: 4% Matched peptides shown in Bold Red 1 MAQSRRHMSS RTPSGSRMST EASARPLRVG SRVEVIGKGH RGTVAYVGAT 51 LFATGKWVGV ILDEAKGKND GTVQGRKYFT CDEGHGIFVR QSQIQVFEDG 101 ADTTSPETPD SSASKVLKRE GADAAAKTSK LRGLKPKKAP TARKTTTRRP 151 KPTRPASTGV AGPSSSLGPS GSASAGELSS SEPSTPAQTP LAAPIIPTPA 201 LTSPGAAPPL PSPSKEEEGL RAQVRDLEEK LETLRLKRSE DKAKLKELEK 251 HKIQLEQVQE WKSKMQEQQA DLQRRLKEAR KEAKEALEAK ERYMEEMADT 301 ADAIEMATLD KEMAEERAES LQQEVEALKE RVDELTTDLE ILKAEIEEKG 351 SDGAASSYQL KQLEEQNARL KDALVRMRDL SSSEKQEHVK LQKLMEKKNQ 401 ELEVVRQQRE RLQEELSQAE STIDELKEQV DAALGAEEMV EMLTDRNLNL 451 EEKVRELRET VGDLEAMNEM NDXLQENARE TELELREQLD MAGARVREAQ 501 KRVEAAQETV ADYQQTIKKY RQLTAHLQDV NRELTNQQEA SVERQQQPPP 551 ETFDFKIKFA ETKAHAKAIE MELRQMEVAQ ANRHMSLLTA FMPDSFLRPG 601 GDHDCVLVLL LMPRLICKAE LIRKQAQEKF DLSENCSERP GLRGAAGEQL 651 SFAAGLVYSL SLLQATLHRY EHALSQCSVD VYKKVGSLYP EMSAHERSLD 701 FLIELLHKDQ LDETVNVEPL NKGIKYYQHL YRIHLAEQPE DSTMQLADHI 751 KFTQSALDCM GVEVGRLRAF LQGGQEATDI ALLLRDLETS CSDTRQFCKK 801 IRRRMPGTDA PGIPAALAFG SQVSDTLLDC RKHLTWVVAV LQEVAAAAAQ 851 LIAPLAENEG LPVAALEELA FKASEQIYGS PSSSPYECLR QSCTILISTM 901 NKLATAMQEG EYDAERPPSK PPPVELRAAA LRAEITDAEG LGLKLEDRET 951 VIKELKKSLK IKGEELSEAN VRXSLLEKKL DSAAKDADER IEKVQTRLDE 1001 TQTLLRKKEK DFEETMDALQ ADIDQLEAEK AELKQRLNSQ SKRTIEGLRG 1051 PPPSGIATLV SGIAGEEPQR GGAPGQAPGA LPGPGLVKDS PLLLQQISAM 1101 RLHISQLQHE NSILRGAQMK ASLAALPPLH VAKLSLPPHE GPGGNLVAGA 1151 LYRKTSQLLE KLNQLSTHTH VVDITRSSPA AKSPSAQLME QVAQLKSLSD 1201 TIEKLKDEVL KETVTQRPGA TVPTDFATFP SSAFLRAKEE QQDDTVYMGK 1251 VTFSCAAGLG QRHRLVLTQE QLHQLHSRLI S
Residue Number Increasing Mass Decreasing Mass
Start - End Observed Mr(expt) Mr(calc) Delta Miss Sequence 91 - 115 1314.06 2626.10 2625.70 0.41 0 QSQIQVFEDGADTTSPETPDSSASK (Ions score 67) 350 - 361 592.78 1183.54 1183.24 0.30 0 GSDGAASSYQLK (Ions score 43) 533 - 544 702.71 1403.40 1403.47 -0.07 0 ELTNQQEASVER (Ions score 43) 1121 - 1133 644.83 1287.65 1287.57 0.08 0 ASLAALPPLHVAK (Ions score 46) LOCUS NP_031861 1281 aa linear ROD 24-DEC-2003 DEFINITION dynactin 1; dynactin 1, retrograde axonal transport [Mus musculus]. ACCESSION NP_031861 VERSION NP_031861.1 GI:6681147 DBSOURCE REFSEQ: accession NM_007835.1 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. REFERENCE 1 (residues 1 to 1281) AUTHORS Jang,W., Weber,J.S., Tokito,M.K., Holzbaur,E.L. and Meisler,M.H. TITLE Mouse p150Glued (dynactin 1) cDNA sequence and evaluation as a candidate for the neuromuscular disease mutation mnd2 JOURNAL Biochem. Biophys. Res. Commun. 231 (2), 344-347 (1997) PUBMED 9070275 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from U60312.1. FEATURES Location/Qualifiers source 1..1281 /organism="Mus musculus" /strain="C57BL/6J" /db_xref="taxon:10090" /chromosome="6" /map="6 34.9 cM" Protein 1..1281 /product="dynactin 1" /note="dynactin 1, retrograde axonal transport" Region 22..>134 /region_name="Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]" /note="KOG0971" /db_xref="CDD:18764" Region 48..90 /region_name="CAP-Gly domain" /note="CAP_GLY" /db_xref="CDD:4486" Region 215..1242 /region_name="Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]" /note="KOG0971" /db_xref="CDD:18764" CDS 1..1281 /gene="Dctn1" /coded_by="NM_007835.1:20..3865" /note="go_component: dynein complex [goid 0030286] [evidence IEA]; go_component: cytoskeleton [goid 0005856] [evidence IEA]; go_component: kinesin complex [goid 0005871] [evidence IEA]; go_function: motor activity [goid 0003774] [evidence IEA]; go_process: microtubule-based process [goid 0007017] [evidence IEA]" /db_xref="GeneID:13191" /db_xref="LocusID:13191" /db_xref="MGI:107745"