Job ID = 12531501 SRX = SRX8342838 Genome = rn6 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 22257083 spots for SRR11790787/SRR11790787.sra Written 22257083 spots for SRR11790787/SRR11790787.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:02 Time loading mirror index: 00:00:01 Multiseed full-index search: 01:25:03 22257083 reads; of these: 22257083 (100.00%) were paired; of these: 2463282 (11.07%) aligned concordantly 0 times 15966368 (71.74%) aligned concordantly exactly 1 time 3827433 (17.20%) aligned concordantly >1 times ---- 2463282 pairs aligned concordantly 0 times; of these: 980435 (39.80%) aligned discordantly 1 time ---- 1482847 pairs aligned 0 times concordantly or discordantly; of these: 2965694 mates make up the pairs; of these: 1468447 (49.51%) aligned 0 times 682286 (23.01%) aligned exactly 1 time 814961 (27.48%) aligned >1 times 96.70% overall alignment rate Time searching: 01:25:08 Overall time: 01:25:08 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chr1... [bam_rmdup_core] processing reference chr10... [bam_rmdup_core] processing reference chr10_KL568008v1_random... [bam_rmdup_core] processing reference chr10_KL568009v1_random... [bam_rmdup_core] processing reference chr10_KL568010v1_random... [bam_rmdup_core] processing reference chr10_AABR07050887v1_random... [bam_rmdup_core] processing reference chr10_KL568011v1_random... [bam_rmdup_core] processing reference chr10_AABR07050894v1_random... [bam_rmdup_core] processing reference chr10_KL568012v1_random... [bam_rmdup_core] processing reference chr10_KL568013v1_random... [bam_rmdup_core] processing reference chr10_KL568014v1_random... [bam_rmdup_core] processing reference chr10_KL568015v1_random... [bam_rmdup_core] processing reference chr10_KL568016v1_random... [bam_rmdup_core] processing reference chr10_KL568017v1_random... [bam_rmdup_core] processing reference chr10_KL568018v1_random... [bam_rmdup_core] processing reference chr11... [bam_rmdup_core] processing reference chr11_KL568019v1_random... [bam_rmdup_core] processing reference chr11_KL568020v1_random... [bam_rmdup_core] processing reference chr11_KL568021v1_random... [bam_rmdup_core] processing reference chr11_KL568022v1_random... [bam_rmdup_core] processing reference chr11_AABR07050825v1_random... [bam_rmdup_core] processing reference chr11_KL568023v1_random... [bam_rmdup_core] processing reference chr11_KL568024v1_random... [bam_rmdup_core] processing reference chr11_KL568025v1_random... [bam_rmdup_core] processing reference chr11_KL568026v1_random... [bam_rmdup_core] processing reference chr11_KL568027v1_random... [bam_rmdup_core] processing reference chr11_KL568028v1_random... [bam_rmdup_core] processing reference chr11_KL568029v1_random... [bam_rmdup_core] processing reference chr11_KL568030v1_random... [bam_rmdup_core] processing reference chr11_AABR07050811v1_random... [bam_rmdup_core] processing reference chr11_KL568031v1_random... [bam_rmdup_core] processing reference chr11_AABR07050815v1_random... [bam_rmdup_core] processing reference chr12... [bam_rmdup_core] processing reference chr12_KL568032v1_random... [bam_rmdup_core] processing reference chr12_KL568033v1_random... [bam_rmdup_core] processing reference chr12_AABR07051089v1_random... [bam_rmdup_core] processing reference chr12_AABR07051090v1_random... [bam_rmdup_core] processing reference chr12_KL568034v1_random... [bam_rmdup_core] processing reference chr12_KL568035v1_random... [bam_rmdup_core] processing reference chr12_AABR07051059v1_random... [bam_rmdup_core] processing reference chr12_KL568036v1_random... [bam_rmdup_core] processing reference chr12_KL568037v1_random... [bam_rmdup_core] processing reference chr12_KL568038v1_random... [bam_rmdup_core] processing reference chr12_KL568039v1_random... [bam_rmdup_core] processing reference chr12_KL568040v1_random... [bam_rmdup_core] processing reference chr13... [bam_rmdup_core] processing reference chr13_KL568041v1_random... [bam_rmdup_core] processing reference chr13_KL568042v1_random... [bam_rmdup_core] processing reference chr13_KL568043v1_random... [bam_rmdup_core] processing reference chr13_AABR07050784v1_random... [bam_rmdup_core] processing reference chr13_KL568044v1_random... [bam_rmdup_core] processing reference chr13_KL568045v1_random... [bam_rmdup_core] processing reference chr13_KL568046v1_random... [bam_rmdup_core] processing reference chr13_KL568047v1_random... [bam_rmdup_core] processing reference chr13_KL568048v1_random... [bam_rmdup_core] processing reference chr13_KL568049v1_random... [bam_rmdup_core] processing reference chr13_KL568050v1_random... [bam_rmdup_core] processing reference chr13_KL568051v1_random... [bam_rmdup_core] processing reference chr14... [bam_rmdup_core] processing reference chr14_KL568052v1_random... [bam_rmdup_core] processing reference chr14_KL568053v1_random... [bam_rmdup_core] processing reference chr14_KL568054v1_random... [bam_rmdup_core] processing reference chr14_KL568055v1_random... [bam_rmdup_core] processing reference chr14_KL568056v1_random... [bam_rmdup_core] processing reference chr14_KL568057v1_random... [bam_rmdup_core] processing reference chr14_KL568058v1_random... [bam_rmdup_core] processing reference chr14_KL568059v1_random... [bam_rmdup_core] processing reference chr14_KL568060v1_random... [bam_rmdup_core] processing reference chr14_KL568061v1_random... [bam_rmdup_core] processing reference chr15... [bam_rmdup_core] processing reference chr15_KL568062v1_random... [bam_rmdup_core] processing reference chr15_KL568063v1_random... [bam_rmdup_core] processing reference chr15_KL568064v1_random... [bam_rmdup_core] processing reference chr15_KL568065v1_random... [bam_rmdup_core] processing reference chr15_KL568066v1_random... [bam_rmdup_core] processing reference chr15_KL568067v1_random... [bam_rmdup_core] processing reference chr15_KL568068v1_random... [bam_rmdup_core] processing reference chr15_KL568069v1_random... [bam_rmdup_core] processing reference chr15_KL568070v1_random... [bam_rmdup_core] processing reference chr15_KL568071v1_random... [bam_rmdup_core] processing reference chr15_KL568072v1_random... [bam_rmdup_core] processing reference chr15_KL568073v1_random... [bam_rmdup_core] processing reference chr15_AABR07046563v1_random... [bam_rmdup_core] processing reference chr15_KL568074v1_random... [bam_rmdup_core] processing reference chr16... [bam_rmdup_core] processing reference chr16_KL568075v1_random... [bam_rmdup_core] processing reference chr16_AABR07050989v1_random... [bam_rmdup_core] processing reference chr16_KL568076v1_random... [bam_rmdup_core] processing reference chr16_KL568077v1_random... [bam_rmdup_core] processing reference chr16_KL568078v1_random... [bam_rmdup_core] processing reference chr16_AABR07050959v1_random... [bam_rmdup_core] processing reference chr16_KL568079v1_random... [bam_rmdup_core] processing reference chr16_KL568080v1_random... [bam_rmdup_core] processing reference chr16_KL568081v1_random... [bam_rmdup_core] processing reference chr16_AABR07050985v1_random... [bam_rmdup_core] processing reference chr16_AABR07050986v1_random... [bam_rmdup_core] processing reference chr16_KL568082v1_random... [bam_rmdup_core] processing reference chr17... [bam_rmdup_core] processing reference chr17_KL568083v1_random... [bam_rmdup_core] processing reference chr17_KL568084v1_random... [bam_rmdup_core] processing reference chr17_KL568085v1_random... [bam_rmdup_core] processing reference chr17_KL568086v1_random... [bam_rmdup_core] processing reference chr17_KL568087v1_random... [bam_rmdup_core] processing reference chr17_KL568088v1_random... [bam_rmdup_core] processing reference chr17_KL568089v1_random... [bam_rmdup_core] processing reference chr17_KL568090v1_random... [bam_rmdup_core] processing reference chr17_KL568091v1_random... [bam_rmdup_core] processing reference chr17_AABR07050910v1_random... [bam_rmdup_core] processing reference chr17_AABR07050911v1_random... [bam_rmdup_core] processing reference chr17_AABR07050912v1_random... [bam_rmdup_core] processing reference chr17_KL568092v1_random... [bam_rmdup_core] processing reference chr17_AABR07050916v1_random... [bam_rmdup_core] processing reference chr18... [bam_rmdup_core] processing reference chr18_KL568093v1_random... [bam_rmdup_core] processing reference chr18_KL568094v1_random... [bam_rmdup_core] processing reference chr18_KL568095v1_random... [bam_rmdup_core] processing reference chr18_AABR07051098v1_random... [bam_rmdup_core] processing reference chr18_AABR07051099v1_random... [bam_rmdup_core] processing reference chr18_KL568096v1_random... [bam_rmdup_core] processing reference chr18_KL568097v1_random... [bam_rmdup_core] processing reference chr18_AABR07051126v1_random... [bam_rmdup_core] processing reference chr18_KL568098v1_random... [bam_rmdup_core] processing reference chr18_KL568099v1_random... [bam_rmdup_core] processing reference chr19... [bam_rmdup_core] processing reference chr19_KL568100v1_random... [bam_rmdup_core] processing reference chr19_KL568101v1_random... [bam_rmdup_core] processing reference chr19_KL568102v1_random... [bam_rmdup_core] processing reference chr1_AABR07046142v1_random... [bam_rmdup_core] processing reference chr1_KL567879v1_random... [bam_rmdup_core] processing reference chr1_AABR07046182v1_random... [bam_rmdup_core] processing reference chr1_KL567880v1_random... [bam_rmdup_core] processing reference chr1_AABR07046186v1_random... [bam_rmdup_core] processing reference chr1_AABR07046187v1_random... [bam_rmdup_core] processing reference chr1_KL567881v1_random... [bam_rmdup_core] processing reference chr1_KL567882v1_random... [bam_rmdup_core] processing reference chr1_KL567883v1_random... [bam_rmdup_core] processing reference chr1_AABR07046211v1_random... [bam_rmdup_core] processing reference chr1_AABR07046212v1_random... [bam_rmdup_core] processing reference chr1_KL567884v1_random... [bam_rmdup_core] processing reference chr1_KL567885v1_random... [bam_rmdup_core] processing reference chr1_KL567886v1_random... [bam_rmdup_core] processing reference chr1_AABR07046222v1_random... [bam_rmdup_core] processing reference chr1_KL567887v1_random... [bam_rmdup_core] processing reference chr1_KL567888v1_random... [bam_rmdup_core] processing reference chr1_AABR07046230v1_random... [bam_rmdup_core] processing reference chr1_AABR07046231v1_random... [bam_rmdup_core] processing reference chr1_KL567889v1_random... [bam_rmdup_core] processing reference chr1_KL567890v1_random... [bam_rmdup_core] processing reference chr1_KL567891v1_random... [bam_rmdup_core] processing reference chr1_AABR07046150v1_random... [bam_rmdup_core] processing reference chr1_KL567892v1_random... [bam_rmdup_core] processing reference chr1_AABR07046158v1_random... [bam_rmdup_core] processing reference chr1_AABR07046159v1_random... [bam_rmdup_core] processing reference chr1_KL567893v1_random... [bam_rmdup_core] processing reference chr1_KL567894v1_random... [bam_rmdup_core] processing reference chr1_KL567895v1_random... [bam_rmdup_core] processing reference chr2... [bam_rmdup_core] processing reference chr20... [bam_rmdup_core] processing reference chr20_AABR07055056v1_random... [bam_rmdup_core] processing reference chr20_KL568103v1_random... [bam_rmdup_core] processing reference chr20_KL568104v1_random... [bam_rmdup_core] processing reference chr20_KL568105v1_random... [bam_rmdup_core] processing reference chr20_AABR07055065v1_random... [bam_rmdup_core] processing reference chr20_KL568106v1_random... [bam_rmdup_core] processing reference chr20_KL568107v1_random... [bam_rmdup_core] processing reference chr20_KL568108v1_random... [bam_rmdup_core] processing reference chr20_KL568109v1_random... [bam_rmdup_core] processing reference chr20_KL568110v1_random... [bam_rmdup_core] processing reference chr2_AABR07045875v1_random... [bam_rmdup_core] processing reference chr2_KL567896v1_random... [bam_rmdup_core] processing reference chr2_KL567897v1_random... [bam_rmdup_core] processing reference chr2_KL567898v1_random... [bam_rmdup_core] processing reference chr2_KL567899v1_random... [bam_rmdup_core] processing reference chr2_KL567900v1_random... [bam_rmdup_core] processing reference chr2_KL567901v1_random... [bam_rmdup_core] processing reference chr2_AABR07045975v1_random... [bam_rmdup_core] processing reference chr2_KL567902v1_random... [bam_rmdup_core] processing reference chr2_KL567903v1_random... [bam_rmdup_core] processing reference chr2_KL567904v1_random... [bam_rmdup_core] processing reference chr2_KL567905v1_random... [bam_rmdup_core] processing reference chr2_KL567906v1_random... [bam_rmdup_core] processing reference chr2_KL567907v1_random... [bam_rmdup_core] processing reference chr2_AABR07046014v1_random... [bam_rmdup_core] processing reference chr2_KL567908v1_random... [bam_rmdup_core] processing reference chr2_KL567909v1_random... [bam_rmdup_core] processing reference chr2_KL567910v1_random... [bam_rmdup_core] processing reference chr2_KL567911v1_random... [bam_rmdup_core] processing reference chr2_KL567912v1_random... [bam_rmdup_core] processing reference chr2_KL567913v1_random... [bam_rmdup_core] processing reference chr2_KL567914v1_random... [bam_rmdup_core] processing reference chr2_KL567915v1_random... [bam_rmdup_core] processing reference chr3... [bam_rmdup_core] processing reference chr3_AABR07046243v1_random... [bam_rmdup_core] processing reference chr3_AABR07046267v1_random... [bam_rmdup_core] processing reference chr3_KL567916v1_random... [bam_rmdup_core] processing reference chr3_KL567917v1_random... [bam_rmdup_core] processing reference chr3_AABR07046283v1_random... [bam_rmdup_core] processing reference chr3_KL567918v1_random... [bam_rmdup_core] processing reference chr3_KL567919v1_random... [bam_rmdup_core] processing reference chr3_AABR07046296v1_random... [bam_rmdup_core] processing reference chr3_KL567920v1_random... [bam_rmdup_core] processing reference chr3_KL567921v1_random... [bam_rmdup_core] processing reference chr3_KL567922v1_random... [bam_rmdup_core] processing reference chr3_KL567923v1_random... [bam_rmdup_core] processing reference chr3_KL567924v1_random... [bam_rmdup_core] processing reference chr3_KL567925v1_random... [bam_rmdup_core] processing reference chr3_AABR07046319v1_random... [bam_rmdup_core] processing reference chr3_KL567926v1_random... [bam_rmdup_core] processing reference chr3_KL567927v1_random... [bam_rmdup_core] processing reference chr3_AABR07046248v1_random... [bam_rmdup_core] processing reference chr3_KL567928v1_random... [bam_rmdup_core] processing reference chr3_KL567929v1_random... [bam_rmdup_core] processing reference chr3_KL567930v1_random... [bam_rmdup_core] processing reference chr3_KL567931v1_random... [bam_rmdup_core] processing reference chr3_KL567932v1_random... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chr4_KL567933v1_random... [bam_rmdup_core] processing reference chr4_AABR07046405v1_random... [bam_rmdup_core] processing reference chr4_KL567934v1_random... [bam_rmdup_core] processing reference chr4_KL567935v1_random... [bam_rmdup_core] processing reference chr4_KL567936v1_random... [bam_rmdup_core] processing reference chr4_KL567937v1_random... [bam_rmdup_core] processing reference chr4_KL567938v1_random... [bam_rmdup_core] processing reference chr4_KL567939v1_random... [bam_rmdup_core] processing reference chr4_KL567940v1_random... [bam_rmdup_core] processing reference chr4_KL567941v1_random... [bam_rmdup_core] processing reference chr4_KL567942v1_random... [bam_rmdup_core] processing reference chr4_KL567943v1_random... [bam_rmdup_core] processing reference chr4_KL567944v1_random... [bam_rmdup_core] processing reference chr4_KL567945v1_random... [bam_rmdup_core] processing reference chr4_KL567946v1_random... [bam_rmdup_core] processing reference chr4_KL567947v1_random... [bam_rmdup_core] processing reference chr5... [bam_rmdup_core] processing reference chr5_KL567948v1_random... [bam_rmdup_core] processing reference chr5_KL567949v1_random... [bam_rmdup_core] processing reference chr5_KL567950v1_random... [bam_rmdup_core] processing reference chr5_KL567951v1_random... [bam_rmdup_core] processing reference chr5_KL567952v1_random... [bam_rmdup_core] processing reference chr5_KL567953v1_random... [bam_rmdup_core] processing reference chr5_KL567954v1_random... [bam_rmdup_core] processing reference chr5_AABR07046507v1_random... [bam_rmdup_core] processing reference chr5_KL567955v1_random... [bam_rmdup_core] processing reference chr5_KL567957v1_random... [bam_rmdup_core] processing reference chr5_AABR07046433v1_random... [bam_rmdup_core] processing reference chr5_KL567958v1_random... [bam_rmdup_core] processing reference chr5_KL567959v1_random... [bam_rmdup_core] processing reference chr5_KL567960v1_random... [bam_rmdup_core] processing reference chr5_KL567961v1_random... [bam_rmdup_core] processing reference chr5_KL567962v1_random... [bam_rmdup_core] processing reference chr5_KL567963v1_random... [bam_rmdup_core] processing reference chr5_KL567964v1_random... [bam_rmdup_core] processing reference chr6... [bam_rmdup_core] processing reference chr6_KL567965v1_random... [bam_rmdup_core] processing reference chr6_KL567966v1_random... [bam_rmdup_core] processing reference chr6_KL567967v1_random... [bam_rmdup_core] processing reference chr6_KL567968v1_random... [bam_rmdup_core] processing reference chr6_KL567969v1_random... [bam_rmdup_core] processing reference chr6_KL567970v1_random... [bam_rmdup_core] processing reference chr6_KL567971v1_random... [bam_rmdup_core] processing reference chr6_KL567972v1_random... [bam_rmdup_core] processing reference chr6_AABR07055042v1_random... [bam_rmdup_core] processing reference chr6_KL567973v1_random... [bam_rmdup_core] processing reference chr6_KL567974v1_random... [bam_rmdup_core] processing reference chr7... [bam_rmdup_core] processing reference chr7_KL567975v1_random... [bam_rmdup_core] processing reference chr7_KL567976v1_random... [bam_rmdup_core] processing reference chr7_KL567977v1_random... [bam_rmdup_core] processing reference chr7_KL567978v1_random... [bam_rmdup_core] processing reference chr7_KL567980v1_random... [bam_rmdup_core] processing reference chr7_KL567981v1_random... [bam_rmdup_core] processing reference chr7_KL567982v1_random... [bam_rmdup_core] processing reference chr7_KL567983v1_random... [bam_rmdup_core] processing reference chr7_KL567984v1_random... [bam_rmdup_core] processing reference chr7_KL567985v1_random... [bam_rmdup_core] processing reference chr7_KL567986v1_random... [bam_rmdup_core] processing reference chr7_KL567987v1_random... [bam_rmdup_core] processing reference chr7_AABR07046136v1_random... [bam_rmdup_core] processing reference chr7_AABR07046137v1_random... [bam_rmdup_core] processing reference chr7_KL567988v1_random... [bam_rmdup_core] processing reference chr7_KL567989v1_random... [bam_rmdup_core] processing reference chr7_KL567990v1_random... [bam_rmdup_core] processing reference chr7_KL567991v1_random... [bam_rmdup_core] processing reference chr7_KL567992v1_random... [bam_rmdup_core] processing reference chr7_KL567993v1_random... [bam_rmdup_core] processing reference chr7_KL567994v1_random... [bam_rmdup_core] processing reference chr8... [bam_rmdup_core] processing reference chr8_KL567995v1_random... [bam_rmdup_core] processing reference chr8_AABR07050727v1_random... [bam_rmdup_core] processing reference chr8_KL567996v1_random... [bam_rmdup_core] processing reference chr8_AABR07050661v1_random... [bam_rmdup_core] processing reference chr8_KL567997v1_random... [bam_rmdup_core] processing reference chr8_KL567998v1_random... [bam_rmdup_core] processing reference chr8_KL567999v1_random... [bam_rmdup_core] processing reference chr8_KL568000v1_random... [bam_rmdup_core] processing reference chr8_AABR07050689v1_random... [bam_rmdup_core] processing reference chr8_KL568001v1_random... [bam_rmdup_core] processing reference chr8_KL568002v1_random... [bam_rmdup_core] processing reference chr9... [bam_rmdup_core] processing reference chr9_KL568003v1_random... [bam_rmdup_core] processing reference chr9_KL568004v1_random... [bam_rmdup_core] processing reference chr9_AABR07051154v1_random... [bam_rmdup_core] processing reference chr9_AABR07051155v1_random... [bam_rmdup_core] processing reference chr9_KL568005v1_random... [bam_rmdup_core] processing reference chr9_KL568006v1_random... [bam_rmdup_core] processing reference chr9_KL568007v1_random... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrUn_KL568167v1... [bam_rmdup_core] processing reference chrUn_KL568169v1... [bam_rmdup_core] processing reference chrUn_KL568170v1... [bam_rmdup_core] processing reference chrUn_KL568172v1... [bam_rmdup_core] processing reference chrUn_KL568173v1... [bam_rmdup_core] processing reference chrUn_KL568174v1... [bam_rmdup_core] processing reference chrUn_KL568176v1... [bam_rmdup_core] processing reference chrUn_KL568177v1... [bam_rmdup_core] processing reference chrUn_KL568178v1... [bam_rmdup_core] processing reference chrUn_KL568179v1... [bam_rmdup_core] processing reference chrUn_KL568180v1... [bam_rmdup_core] processing reference chrUn_AABR07022511v1... [bam_rmdup_core] processing reference chrUn_KL568181v1... [bam_rmdup_core] processing reference chrUn_KL568182v1... [bam_rmdup_core] processing reference chrUn_AABR07022517v1... [bam_rmdup_core] processing reference chrUn_KL568183v1... [bam_rmdup_core] processing reference chrUn_KL568184v1... [bam_rmdup_core] processing reference chrUn_KL568185v1... [bam_rmdup_core] processing reference chrUn_KL568186v1... [bam_rmdup_core] processing reference chrUn_AABR07022532v1... [bam_rmdup_core] processing reference chrUn_KL568187v1... [bam_rmdup_core] processing reference chrUn_KL568188v1... [bam_rmdup_core] processing reference chrUn_KL568189v1... [bam_rmdup_core] processing reference chrUn_KL568190v1... [bam_rmdup_core] processing reference chrUn_KL568191v1... [bam_rmdup_core] processing reference chrUn_AABR07022559v1... [bam_rmdup_core] processing reference chrUn_KL568192v1... [bam_rmdup_core] processing reference chrUn_KL568193v1... [bam_rmdup_core] processing reference chrUn_KL568194v1... [bam_rmdup_core] processing reference chrUn_KL568195v1... [bam_rmdup_core] processing reference chrUn_KL568196v1... [bam_rmdup_core] processing reference chrUn_KL568197v1... [bam_rmdup_core] processing reference chrUn_AABR07022594v1... [bam_rmdup_core] processing reference chrUn_KL568198v1... [bam_rmdup_core] processing reference chrUn_KL568199v1... [bam_rmdup_core] processing reference chrUn_KL568200v1... [bam_rmdup_core] processing reference chrUn_KL568201v1... [bam_rmdup_core] processing reference chrUn_AABR07022608v1... [bam_rmdup_core] processing reference chrUn_KL568202v1... [bam_rmdup_core] processing reference chrUn_AABR07022616v1... [bam_rmdup_core] processing reference chrUn_AABR07022619v1... [bam_rmdup_core] processing reference chrUn_AABR07022621v1... [bam_rmdup_core] processing reference chrUn_KL568204v1... [bam_rmdup_core] processing reference chrUn_KL568205v1... [bam_rmdup_core] processing reference chrUn_AABR07022627v1... [bam_rmdup_core] processing reference chrUn_AABR07022628v1... [bam_rmdup_core] processing reference chrUn_AABR07022630v1... [bam_rmdup_core] processing reference chrUn_KL568206v1... [bam_rmdup_core] processing reference chrUn_KL568207v1... [bam_rmdup_core] processing reference chrUn_KL568208v1... [bam_rmdup_core] processing reference chrUn_KL568211v1... [bam_rmdup_core] processing reference chrUn_KL568212v1... [bam_rmdup_core] processing reference chrUn_AABR07022654v1... [bam_rmdup_core] processing reference chrUn_KL568213v1... [bam_rmdup_core] processing reference chrUn_KL568214v1... [bam_rmdup_core] processing reference chrUn_KL568215v1... [bam_rmdup_core] processing reference chrUn_KL568216v1... [bam_rmdup_core] processing reference chrUn_KL568218v1... [bam_rmdup_core] processing reference chrUn_KL568219v1... [bam_rmdup_core] processing reference chrUn_AABR07022684v1... [bam_rmdup_core] processing reference chrUn_KL568220v1... [bam_rmdup_core] processing reference chrUn_KL568221v1... [bam_rmdup_core] processing reference chrUn_AABR07022264v1... [bam_rmdup_core] processing reference chrUn_KL568223v1... [bam_rmdup_core] processing reference chrUn_KL568224v1... [bam_rmdup_core] processing reference chrUn_KL568225v1... [bam_rmdup_core] processing reference chrUn_AABR07022707v1... [bam_rmdup_core] processing reference chrUn_KL568226v1... [bam_rmdup_core] processing reference chrUn_KL568227v1... [bam_rmdup_core] processing reference chrUn_KL568228v1... [bam_rmdup_core] processing reference chrUn_AABR07022265v1... [bam_rmdup_core] processing reference chrUn_KL568229v1... [bam_rmdup_core] processing reference chrUn_AABR07022726v1... [bam_rmdup_core] processing reference chrUn_AABR07022729v1... [bam_rmdup_core] processing reference chrUn_KL568232v1... [bam_rmdup_core] processing reference chrUn_KL568233v1... [bam_rmdup_core] processing reference chrUn_AABR07022737v1... [bam_rmdup_core] processing reference chrUn_AABR07022738v1... [bam_rmdup_core] processing reference chrUn_KL568234v1... [bam_rmdup_core] processing reference chrUn_KL568235v1... [bam_rmdup_core] processing reference chrUn_AABR07022266v1... [bam_rmdup_core] processing reference chrUn_KL568236v1... [bam_rmdup_core] processing reference chrUn_KL568237v1... [bam_rmdup_core] processing reference chrUn_KL568238v1... [bam_rmdup_core] processing reference chrUn_AABR07022753v1... [bam_rmdup_core] processing reference chrUn_KL568240v1... [bam_rmdup_core] processing reference chrUn_KL568241v1... [bam_rmdup_core] processing reference chrUn_AABR07022759v1... [bam_rmdup_core] processing reference chrUn_AABR07022760v1... [bam_rmdup_core] processing reference chrUn_KL568242v1... [bam_rmdup_core] processing reference chrUn_KL568243v1... [bam_rmdup_core] processing reference chrUn_KL568244v1... [bam_rmdup_core] processing reference chrUn_KL568245v1... [bam_rmdup_core] processing reference chrUn_KL568246v1... [bam_rmdup_core] processing reference chrUn_KL568247v1... [bam_rmdup_core] processing reference chrUn_KL568249v1... [bam_rmdup_core] processing reference chrUn_AABR07022783v1... [bam_rmdup_core] processing reference chrUn_KL568250v1... [bam_rmdup_core] processing reference chrUn_KL568251v1... [bam_rmdup_core] processing reference chrUn_AABR07022273v1... [bam_rmdup_core] processing reference chrUn_KL568252v1... [bam_rmdup_core] processing reference chrUn_KL568253v1... [bam_rmdup_core] processing reference chrUn_KL568254v1... [bam_rmdup_core] processing reference chrUn_KL568257v1... [bam_rmdup_core] processing reference chrUn_KL568259v1... [bam_rmdup_core] processing reference chrUn_KL568260v1... [bam_rmdup_core] processing reference chrUn_KL568261v1... [bam_rmdup_core] processing reference chrUn_AABR07022827v1... [bam_rmdup_core] processing reference chrUn_AABR07022828v1... [bam_rmdup_core] processing reference chrUn_AABR07022829v1... [bam_rmdup_core] processing reference chrUn_AABR07022830v1... [bam_rmdup_core] processing reference chrUn_KL568263v1... [bam_rmdup_core] processing reference chrUn_KL568264v1... [bam_rmdup_core] processing reference chrUn_KL568265v1... [bam_rmdup_core] processing reference chrUn_KL568266v1... [bam_rmdup_core] processing reference chrUn_KL568267v1... [bam_rmdup_core] processing reference chrUn_KL568268v1... [bam_rmdup_core] processing reference chrUn_AABR07022857v1... [bam_rmdup_core] processing reference chrUn_KL568270v1... [bam_rmdup_core] processing reference chrUn_KL568271v1... [bam_rmdup_core] processing reference chrUn_AABR07022871v1... [bam_rmdup_core] processing reference chrUn_KL568272v1... [bam_rmdup_core] processing reference chrUn_KL568273v1... [bam_rmdup_core] processing reference chrUn_KL568274v1... [bam_rmdup_core] processing reference chrUn_AABR07022884v1... [bam_rmdup_core] processing reference chrUn_KL568278v1... [bam_rmdup_core] processing reference chrUn_KL568279v1... [bam_rmdup_core] processing reference chrUn_AABR07022284v1... [bam_rmdup_core] processing reference chrUn_KL568280v1... [bam_rmdup_core] processing reference chrUn_KL568281v1... [bam_rmdup_core] processing reference chrUn_AABR07022905v1... [bam_rmdup_core] processing reference chrUn_AABR07022907v1... [bam_rmdup_core] processing reference chrUn_KL568282v1... [bam_rmdup_core] processing reference chrUn_KL568283v1... [bam_rmdup_core] processing reference chrUn_AABR07022923v1... [bam_rmdup_core] processing reference chrUn_KL568284v1... [bam_rmdup_core] processing reference chrUn_KL568285v1... [bam_rmdup_core] processing reference chrUn_KL568286v1... [bam_rmdup_core] processing reference chrUn_AABR07022934v1... [bam_rmdup_core] processing reference chrUn_KL568287v1... [bam_rmdup_core] processing reference chrUn_KL568288v1... [bam_rmdup_core] processing reference chrUn_KL568289v1... [bam_rmdup_core] processing reference chrUn_AABR07022287v1... [bam_rmdup_core] processing reference chrUn_KL568290v1... [bam_rmdup_core] processing reference chrUn_KL568292v1... [bam_rmdup_core] processing reference chrUn_KL568293v1... [bam_rmdup_core] processing reference chrUn_AABR07022973v1... [bam_rmdup_core] processing reference chrUn_KL568295v1... [bam_rmdup_core] processing reference chrUn_AABR07022990v1... [bam_rmdup_core] processing reference chrUn_KL568296v1... [bam_rmdup_core] processing reference chrUn_KL568297v1... [bam_rmdup_core] processing reference chrUn_KL568298v1... [bam_rmdup_core] processing reference chrUn_KL568299v1... [bam_rmdup_core] processing reference chrUn_KL568300v1... [bam_rmdup_core] processing reference chrUn_KL568301v1... [bam_rmdup_core] processing reference chrUn_AABR07022288v1... [bam_rmdup_core] processing reference chrUn_AABR07023014v1... [bam_rmdup_core] processing reference chrUn_KL568303v1... [bam_rmdup_core] processing reference chrUn_KL568304v1... [bam_rmdup_core] processing reference chrUn_AABR07023024v1... [bam_rmdup_core] processing reference chrUn_KL568306v1... [bam_rmdup_core] processing reference chrUn_AABR07023031v1... [bam_rmdup_core] processing reference chrUn_KL568307v1... [bam_rmdup_core] processing reference chrUn_KL568308v1... [bam_rmdup_core] processing reference chrUn_KL568309v1... [bam_rmdup_core] processing reference chrUn_KL568310v1... [bam_rmdup_core] processing reference chrUn_KL568311v1... [bam_rmdup_core] processing reference chrUn_KL568312v1... [bam_rmdup_core] processing reference chrUn_KL568313v1... [bam_rmdup_core] processing reference chrUn_AABR07023067v1... [bam_rmdup_core] processing reference chrUn_AABR07023068v1... [bam_rmdup_core] processing reference chrUn_KL568314v1... [bam_rmdup_core] processing reference chrUn_KL568315v1... [bam_rmdup_core] processing reference chrUn_KL568316v1... [bam_rmdup_core] processing reference chrUn_KL568317v1... [bam_rmdup_core] processing reference chrUn_KL568318v1... [bam_rmdup_core] processing reference chrUn_KL568319v1... [bam_rmdup_core] processing reference chrUn_KL568320v1... [bam_rmdup_core] processing reference chrUn_KL568321v1... [bam_rmdup_core] processing reference chrUn_KL568322v1... [bam_rmdup_core] processing reference chrUn_AABR07023168v1... [bam_rmdup_core] processing reference chrUn_KL568323v1... [bam_rmdup_core] processing reference chrUn_KL568324v1... [bam_rmdup_core] processing reference chrUn_KL568325v1... [bam_rmdup_core] processing reference chrUn_KL568326v1... [bam_rmdup_core] processing reference chrUn_KL568327v1... [bam_rmdup_core] processing reference chrUn_KL568328v1... [bam_rmdup_core] processing reference chrUn_KL568329v1... [bam_rmdup_core] processing reference chrUn_KL568330v1... [bam_rmdup_core] processing reference chrUn_KL568331v1... [bam_rmdup_core] processing reference chrUn_KL568332v1... [bam_rmdup_core] processing reference chrUn_KL568333v1... [bam_rmdup_core] processing reference chrUn_KL568334v1... [bam_rmdup_core] processing reference chrUn_KL568335v1... [bam_rmdup_core] processing reference chrUn_KL568336v1... [bam_rmdup_core] processing reference chrUn_KL568337v1... [bam_rmdup_core] processing reference chrUn_AABR07023321v1... [bam_rmdup_core] processing reference chrUn_AABR07023324v1... [bam_rmdup_core] processing reference chrUn_AABR07023325v1... [bam_rmdup_core] processing reference chrUn_KL568339v1... [bam_rmdup_core] processing reference chrUn_KL568340v1... [bam_rmdup_core] processing reference chrUn_KL568341v1... [bam_rmdup_core] processing reference chrUn_KL568342v1... [bam_rmdup_core] processing reference chrUn_KL568343v1... [bam_rmdup_core] processing reference chrUn_AABR07022299v1... [bam_rmdup_core] processing reference chrUn_KL568344v1... [bam_rmdup_core] processing reference chrUn_KL568345v1... [bam_rmdup_core] processing reference chrUn_KL568346v1... [bam_rmdup_core] processing reference chrUn_KL568347v1... [bam_rmdup_core] processing reference chrUn_KL568348v1... [bam_rmdup_core] processing reference chrUn_KL568349v1... [bam_rmdup_core] processing reference chrUn_KL568350v1... [bam_rmdup_core] processing reference chrUn_AABR07023445v1... [bam_rmdup_core] processing reference chrUn_KL568351v1... [bam_rmdup_core] processing reference chrUn_KL568352v1... [bam_rmdup_core] processing reference chrUn_AABR07022300v1... [bam_rmdup_core] processing reference chrUn_KL568353v1... [bam_rmdup_core] processing reference chrUn_KL568354v1... [bam_rmdup_core] processing reference chrUn_AABR07023534v1... [bam_rmdup_core] processing reference chrUn_KL568355v1... [bam_rmdup_core] processing reference chrUn_KL568356v1... [bam_rmdup_core] processing reference chrUn_KL568357v1... [bam_rmdup_core] processing reference chrUn_KL568358v1... [bam_rmdup_core] processing reference chrUn_KL568359v1... [bam_rmdup_core] processing reference chrUn_KL568360v1... [bam_rmdup_core] processing reference chrUn_KL568361v1... [bam_rmdup_core] processing reference chrUn_KL568362v1... [bam_rmdup_core] processing reference chrUn_KL568363v1... [bam_rmdup_core] processing reference chrUn_KL568364v1... [bam_rmdup_core] processing reference chrUn_KL568365v1... [bam_rmdup_core] processing reference chrUn_KL568366v1... [bam_rmdup_core] processing reference chrUn_KL568367v1... [bam_rmdup_core] processing reference chrUn_KL568368v1... [bam_rmdup_core] processing reference chrUn_KL568369v1... [bam_rmdup_core] processing reference chrUn_KL568370v1... [bam_rmdup_core] processing reference chrUn_KL568372v1... [bam_rmdup_core] processing reference chrUn_KL568374v1... [bam_rmdup_core] processing reference chrUn_KL568375v1... [bam_rmdup_core] processing reference chrUn_KL568376v1... [bam_rmdup_core] processing reference chrUn_KL568377v1... [bam_rmdup_core] processing reference chrUn_KL568378v1... [bam_rmdup_core] processing reference chrUn_KL568379v1... [bam_rmdup_core] processing reference chrUn_KL568380v1... [bam_rmdup_core] processing reference chrUn_KL568381v1... [bam_rmdup_core] processing reference chrUn_AABR07022304v1... [bam_rmdup_core] processing reference chrUn_KL568382v1... [bam_rmdup_core] processing reference chrUn_KL568383v1... [bam_rmdup_core] processing reference chrUn_KL568384v1... [bam_rmdup_core] processing reference chrUn_KL568385v1... [bam_rmdup_core] processing reference chrUn_KL568387v1... [bam_rmdup_core] processing reference chrUn_KL568388v1... [bam_rmdup_core] processing reference chrUn_KL568389v1... [bam_rmdup_core] processing reference chrUn_KL568390v1... [bam_rmdup_core] processing reference chrUn_AABR07023949v1... [bam_rmdup_core] processing reference chrUn_KL568391v1... [bam_rmdup_core] processing reference chrUn_KL568392v1... [bam_rmdup_core] processing reference chrUn_KL568393v1... [bam_rmdup_core] processing reference chrUn_KL568394v1... [bam_rmdup_core] processing reference chrUn_KL568395v1... [bam_rmdup_core] processing reference chrUn_AABR07023967v1... [bam_rmdup_core] processing reference chrUn_AABR07023968v1... [bam_rmdup_core] processing reference chrUn_KL568396v1... [bam_rmdup_core] processing reference chrUn_KL568397v1... [bam_rmdup_core] processing reference chrUn_KL568398v1... [bam_rmdup_core] processing reference chrUn_KL568399v1... [bam_rmdup_core] processing reference chrUn_KL568400v1... [bam_rmdup_core] processing reference chrUn_KL568401v1... [bam_rmdup_core] processing reference chrUn_KL568402v1... [bam_rmdup_core] processing reference chrUn_AABR07023990v1... [bam_rmdup_core] processing reference chrUn_KL568403v1... [bam_rmdup_core] processing reference chrUn_KL568404v1... [bam_rmdup_core] processing reference chrUn_KL568405v1... [bam_rmdup_core] processing reference chrUn_KL568406v1... [bam_rmdup_core] processing reference chrUn_AABR07024005v1... [bam_rmdup_core] processing reference chrUn_AABR07024006v1... [bam_rmdup_core] processing reference chrUn_AABR07024007v1... [bam_rmdup_core] processing reference chrUn_KL568407v1... [bam_rmdup_core] processing reference chrUn_KL568408v1... [bam_rmdup_core] processing reference chrUn_KL568409v1... [bam_rmdup_core] processing reference chrUn_AABR07024031v1... [bam_rmdup_core] processing reference chrUn_AABR07024032v1... [bam_rmdup_core] processing reference chrUn_KL568410v1... [bam_rmdup_core] processing reference chrUn_AABR07024039v1... [bam_rmdup_core] processing reference chrUn_AABR07024040v1... [bam_rmdup_core] processing reference chrUn_AABR07024041v1... [bam_rmdup_core] processing reference chrUn_AABR07024042v1... [bam_rmdup_core] processing reference chrUn_AABR07024043v1... [bam_rmdup_core] processing reference chrUn_KL568411v1... [bam_rmdup_core] processing reference chrUn_AABR07024044v1... [bam_rmdup_core] processing reference chrUn_AABR07024045v1... [bam_rmdup_core] processing reference chrUn_AABR07024046v1... [bam_rmdup_core] processing reference chrUn_AABR07024047v1... [bam_rmdup_core] processing reference chrUn_KL568412v1... [bam_rmdup_core] processing reference chrUn_KL568413v1... [bam_rmdup_core] processing reference chrUn_KL568414v1... [bam_rmdup_core] processing reference chrUn_KL568415v1... [bam_rmdup_core] processing reference chrUn_AABR07024066v1... [bam_rmdup_core] processing reference chrUn_AABR07024067v1... [bam_rmdup_core] processing reference chrUn_KL568416v1... [bam_rmdup_core] processing reference chrUn_KL568417v1... [bam_rmdup_core] processing reference chrUn_AABR07024071v1... [bam_rmdup_core] processing reference chrUn_KL568418v1... [bam_rmdup_core] processing reference chrUn_AABR07024080v1... [bam_rmdup_core] processing reference chrUn_KL568419v1... [bam_rmdup_core] processing reference chrUn_KL568420v1... [bam_rmdup_core] processing reference chrUn_AABR07024092v1... [bam_rmdup_core] processing reference chrUn_KL568421v1... [bam_rmdup_core] processing reference chrUn_AABR07024100v1... [bam_rmdup_core] processing reference chrUn_AABR07024101v1... [bam_rmdup_core] processing reference chrUn_KL568422v1... [bam_rmdup_core] processing reference chrUn_AABR07024102v1... [bam_rmdup_core] processing reference chrUn_AABR07024104v1... [bam_rmdup_core] processing reference chrUn_AABR07024105v1... [bam_rmdup_core] processing reference chrUn_AABR07024106v1... [bam_rmdup_core] processing reference chrUn_KL568423v1... [bam_rmdup_core] processing reference chrUn_KL568424v1... [bam_rmdup_core] processing reference chrUn_AABR07024115v1... [bam_rmdup_core] processing reference chrUn_KL568425v1... [bam_rmdup_core] processing reference chrUn_KL568426v1... [bam_rmdup_core] processing reference chrUn_AABR07024118v1... [bam_rmdup_core] processing reference chrUn_AABR07024119v1... [bam_rmdup_core] processing reference chrUn_AABR07024120v1... [bam_rmdup_core] processing reference chrUn_AABR07024121v1... [bam_rmdup_core] processing reference chrUn_AABR07024122v1... [bam_rmdup_core] processing reference chrUn_AABR07024123v1... [bam_rmdup_core] processing reference chrUn_AABR07024124v1... [bam_rmdup_core] processing reference chrUn_AABR07024125v1... [bam_rmdup_core] processing reference chrUn_KL568427v1... [bam_rmdup_core] processing reference chrUn_KL568428v1... [bam_rmdup_core] processing reference chrUn_KL568430v1... [bam_rmdup_core] processing reference chrUn_KL568431v1... [bam_rmdup_core] processing reference chrUn_AABR07024138v1... [bam_rmdup_core] processing reference chrUn_KL568432v1... [bam_rmdup_core] processing reference chrUn_AABR07024145v1... [bam_rmdup_core] processing reference chrUn_KL568433v1... [bam_rmdup_core] processing reference chrUn_AABR07024150v1... [bam_rmdup_core] processing reference chrUn_KL568434v1... [bam_rmdup_core] processing reference chrUn_AABR07024159v1... [bam_rmdup_core] processing reference chrUn_AABR07024160v1... [bam_rmdup_core] processing reference chrUn_KL568435v1... [bam_rmdup_core] processing reference chrUn_KL568436v1... [bam_rmdup_core] processing reference chrUn_AABR07024165v1... [bam_rmdup_core] processing reference chrUn_KL568437v1... [bam_rmdup_core] processing reference chrUn_KL568438v1... [bam_rmdup_core] processing reference chrUn_AABR07024177v1... [bam_rmdup_core] processing reference chrUn_AABR07024178v1... [bam_rmdup_core] processing reference chrUn_KL568439v1... [bam_rmdup_core] processing reference chrUn_AABR07024182v1... [bam_rmdup_core] processing reference chrUn_KL568440v1... [bam_rmdup_core] processing reference chrUn_AABR07024187v1... [bam_rmdup_core] processing reference chrUn_AABR07024188v1... [bam_rmdup_core] processing reference chrUn_AABR07024189v1... [bam_rmdup_core] processing reference chrUn_KL568441v1... [bam_rmdup_core] processing reference chrUn_AABR07024192v1... [bam_rmdup_core] processing reference chrUn_AABR07024193v1... [bam_rmdup_core] processing reference chrUn_AABR07024194v1... [bam_rmdup_core] processing reference chrUn_AABR07024195v1... [bam_rmdup_core] processing reference chrUn_AABR07024196v1... [bam_rmdup_core] processing reference chrUn_KL568442v1... [bam_rmdup_core] processing reference chrUn_KL568443v1... [bam_rmdup_core] processing reference chrUn_KL568444v1... [bam_rmdup_core] processing reference chrUn_AABR07024203v1... [bam_rmdup_core] processing reference chrUn_AABR07024204v1... [bam_rmdup_core] processing reference chrUn_AABR07024205v1... [bam_rmdup_core] processing reference chrUn_AABR07024206v1... [bam_rmdup_core] processing reference chrUn_KL568445v1... [bam_rmdup_core] processing reference chrUn_KL568446v1... [bam_rmdup_core] processing reference chrUn_KL568447v1... [bam_rmdup_core] processing reference chrUn_AABR07024222v1... [bam_rmdup_core] processing reference chrUn_AABR07022335v1... [bam_rmdup_core] processing reference chrUn_KL568448v1... [bam_rmdup_core] processing reference chrUn_AABR07024226v1... [bam_rmdup_core] processing reference chrUn_AABR07024228v1... [bam_rmdup_core] processing reference chrUn_AABR07024229v1... [bam_rmdup_core] processing reference chrUn_KL568449v1... [bam_rmdup_core] processing reference chrUn_KL568450v1... [bam_rmdup_core] processing reference chrUn_KL568451v1... [bam_rmdup_core] processing reference chrUn_AABR07024262v1... [bam_rmdup_core] processing reference chrUn_AABR07024263v1... [bam_rmdup_core] processing reference chrUn_AABR07024264v1... [bam_rmdup_core] processing reference chrUn_AABR07024265v1... [bam_rmdup_core] processing reference chrUn_AABR07024267v1... [bam_rmdup_core] processing reference chrUn_AABR07024269v1... [bam_rmdup_core] processing reference chrUn_KL568452v1... [bam_rmdup_core] processing reference chrUn_KL568453v1... [bam_rmdup_core] processing reference chrUn_KL568454v1... [bam_rmdup_core] processing reference chrUn_KL568455v1... [bam_rmdup_core] processing reference chrUn_AABR07024286v1... [bam_rmdup_core] processing reference chrUn_KL568456v1... [bam_rmdup_core] processing reference chrUn_AABR07024289v1... [bam_rmdup_core] processing reference chrUn_AABR07024290v1... [bam_rmdup_core] processing reference chrUn_AABR07024291v1... [bam_rmdup_core] processing reference chrUn_AABR07024292v1... [bam_rmdup_core] processing reference chrUn_AABR07024294v1... [bam_rmdup_core] processing reference chrUn_KL568457v1... [bam_rmdup_core] processing reference chrUn_KL568458v1... [bam_rmdup_core] processing reference chrUn_KL568459v1... [bam_rmdup_core] processing reference chrUn_AABR07024304v1... [bam_rmdup_core] processing reference chrUn_KL568460v1... [bam_rmdup_core] processing reference chrUn_KL568461v1... [bam_rmdup_core] processing reference chrUn_KL568462v1... [bam_rmdup_core] processing reference chrUn_AABR07024319v1... [bam_rmdup_core] processing reference chrUn_AABR07024320v1... [bam_rmdup_core] processing reference chrUn_AABR07024321v1... [bam_rmdup_core] processing reference chrUn_AABR07024322v1... [bam_rmdup_core] processing reference chrUn_AABR07024323v1... [bam_rmdup_core] processing reference chrUn_KL568463v1... [bam_rmdup_core] processing reference chrUn_AABR07024331v1... [bam_rmdup_core] processing reference chrUn_AABR07024332v1... [bam_rmdup_core] processing reference chrUn_KL568464v1... [bam_rmdup_core] processing reference chrUn_KL568465v1... [bam_rmdup_core] processing reference chrUn_AABR07024349v1... [bam_rmdup_core] processing reference chrUn_AABR07024350v1... [bam_rmdup_core] processing reference chrUn_AABR07024351v1... [bam_rmdup_core] processing reference chrUn_KL568466v1... [bam_rmdup_core] processing reference chrUn_KL568467v1... [bam_rmdup_core] processing reference chrUn_KL568468v1... [bam_rmdup_core] processing reference chrUn_KL568469v1... [bam_rmdup_core] processing reference chrUn_KL568470v1... [bam_rmdup_core] processing reference chrUn_KL568471v1... [bam_rmdup_core] processing reference chrUn_AABR07024371v1... [bam_rmdup_core] processing reference chrUn_KL568472v1... [bam_rmdup_core] processing reference chrUn_AABR07024374v1... [bam_rmdup_core] processing reference chrUn_KL568473v1... [bam_rmdup_core] processing reference chrUn_AABR07024382v1... [bam_rmdup_core] processing reference chrUn_AABR07024383v1... [bam_rmdup_core] processing reference chrUn_KL568474v1... [bam_rmdup_core] processing reference chrUn_KL568475v1... [bam_rmdup_core] processing reference chrUn_AABR07022350v1... [bam_rmdup_core] processing reference chrUn_AABR07024390v1... [bam_rmdup_core] processing reference chrUn_KL568476v1... [bam_rmdup_core] processing reference chrUn_AABR07024394v1... [bam_rmdup_core] processing reference chrUn_AABR07024395v1... [bam_rmdup_core] processing reference chrUn_AABR07024396v1... [bam_rmdup_core] processing reference chrUn_AABR07024397v1... [bam_rmdup_core] processing reference chrUn_AABR07024398v1... [bam_rmdup_core] processing reference chrUn_AABR07024399v1... [bam_rmdup_core] processing reference chrUn_KL568477v1... [bam_rmdup_core] processing reference chrUn_KL568478v1... [bam_rmdup_core] processing reference chrUn_KL568479v1... [bam_rmdup_core] processing reference chrUn_KL568480v1... [bam_rmdup_core] processing reference chrUn_KL568481v1... [bam_rmdup_core] processing reference chrUn_KL568482v1... [bam_rmdup_core] processing reference chrUn_KL568483v1... [bam_rmdup_core] processing reference chrUn_AABR07024421v1... [bam_rmdup_core] processing reference chrUn_KL568484v1... [bam_rmdup_core] processing reference chrUn_KL568485v1... [bam_rmdup_core] processing reference chrUn_AABR07024427v1... [bam_rmdup_core] processing reference chrUn_AABR07024428v1... [bam_rmdup_core] processing reference chrUn_KL568486v1... [bam_rmdup_core] processing reference chrUn_KL568487v1... [bam_rmdup_core] processing reference chrUn_AABR07024432v1... [bam_rmdup_core] processing reference chrUn_AABR07022359v1... [bam_rmdup_core] processing reference chrUn_KL568488v1... [bam_rmdup_core] processing reference chrUn_AABR07022367v1... [bam_rmdup_core] processing reference chrUn_KL568490v1... [bam_rmdup_core] processing reference chrUn_KL568491v1... [bam_rmdup_core] processing reference chrUn_AABR07022378v1... [bam_rmdup_core] processing reference chrUn_KL568492v1... [bam_rmdup_core] processing reference chrUn_KL568493v1... [bam_rmdup_core] processing reference chrUn_KL568494v1... [bam_rmdup_core] processing reference chrUn_KL568495v1... [bam_rmdup_core] processing reference chrUn_KL568496v1... [bam_rmdup_core] processing reference chrUn_KL568497v1... [bam_rmdup_core] processing reference chrUn_KL568498v1... [bam_rmdup_core] processing reference chrUn_KL568499v1... [bam_rmdup_core] processing reference chrUn_KL568500v1... [bam_rmdup_core] processing reference chrUn_KL568501v1... [bam_rmdup_core] processing reference chrUn_AABR07022416v1... [bam_rmdup_core] processing reference chrUn_KL568502v1... [bam_rmdup_core] processing reference chrUn_KL568503v1... [bam_rmdup_core] processing reference chrUn_KL568505v1... [bam_rmdup_core] processing reference chrUn_KL568508v1... [bam_rmdup_core] processing reference chrUn_KL568509v1... [bam_rmdup_core] processing reference chrUn_KL568510v1... [bam_rmdup_core] processing reference chrUn_KL568511v1... [bam_rmdup_core] processing reference chrUn_KL568512v1... [bam_rmdup_core] processing reference chrUn_KL568513v1... [bam_rmdup_core] processing reference chrUn_KL568514v1... [bam_rmdup_core] processing reference chrUn_KL568517v1... [bam_rmdup_core] processing reference chrUn_KL568518v1... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrX_KL568111v1_random... [bam_rmdup_core] processing reference chrX_KL568112v1_random... [bam_rmdup_core] processing reference chrX_KL568113v1_random... [bam_rmdup_core] processing reference chrX_KL568114v1_random... [bam_rmdup_core] processing reference chrX_AABR07045742v1_random... [bam_rmdup_core] processing reference chrX_AABR07045743v1_random... [bam_rmdup_core] processing reference chrX_KL568115v1_random... [bam_rmdup_core] processing reference chrX_KL568116v1_random... [bam_rmdup_core] processing reference chrX_KL568117v1_random... [bam_rmdup_core] processing reference chrX_KL568118v1_random... [bam_rmdup_core] processing reference chrX_KL568119v1_random... [bam_rmdup_core] processing reference chrX_AABR07045766v1_random... [bam_rmdup_core] processing reference chrX_KL568120v1_random... [bam_rmdup_core] processing reference chrX_KL568121v1_random... [bam_rmdup_core] processing reference chrX_KL568122v1_random... [bam_rmdup_core] processing reference chrX_AABR07045776v1_random... [bam_rmdup_core] processing reference chrX_KL568123v1_random... [bam_rmdup_core] processing reference chrX_KL568124v1_random... [bam_rmdup_core] processing reference chrX_KL568125v1_random... [bam_rmdup_core] processing reference chrX_KL568126v1_random... [bam_rmdup_core] processing reference chrX_KL568127v1_random... [bam_rmdup_core] processing reference chrX_KL568128v1_random... [bam_rmdup_core] processing reference chrX_KL568129v1_random... [bam_rmdup_core] processing reference chrX_KL568130v1_random... [bam_rmdup_core] processing reference chrX_KL568131v1_random... [bam_rmdup_core] processing reference chrX_KL568132v1_random... [bam_rmdup_core] processing reference chrX_KL568133v1_random... [bam_rmdup_core] processing reference chrX_KL568134v1_random... [bam_rmdup_core] processing reference chrX_KL568135v1_random... [bam_rmdup_core] processing reference chrX_AABR07045688v1_random... [bam_rmdup_core] processing reference chrX_AABR07045689v1_random... [bam_rmdup_core] processing reference chrX_KL568136v1_random... [bam_rmdup_core] processing reference chrX_KL568137v1_random... [bam_rmdup_core] processing reference chrX_KL568138v1_random... [bam_rmdup_core] processing reference chrY... [bam_rmdup_core] processing reference chrY_KL568139v1_random... [bam_rmdup_core] processing reference chrY_KL568140v1_random... [bam_rmdup_core] processing reference chrY_KL568141v1_random... [bam_rmdup_core] processing reference chrY_KL568142v1_random... [bam_rmdup_core] processing reference chrY_KL568143v1_random... [bam_rmdup_core] processing reference chrY_KL568144v1_random... [bam_rmdup_core] processing reference chrY_KL568145v1_random... [bam_rmdup_core] processing reference chrY_KL568146v1_random... [bam_rmdup_core] processing reference chrY_KL568147v1_random... [bam_rmdup_core] processing reference chrY_KL568148v1_random... [bam_rmdup_core] processing reference chrY_KL568149v1_random... [bam_rmdup_core] processing reference chrY_KL568150v1_random... [bam_rmdup_core] processing reference chrY_KL568151v1_random... [bam_rmdup_core] processing reference chrY_KL568152v1_random... [bam_rmdup_core] processing reference chrY_KL568153v1_random... [bam_rmdup_core] processing reference chrY_KL568154v1_random... [bam_rmdup_core] processing reference chrY_KL568155v1_random... [bam_rmdup_core] processing reference chrY_KL568156v1_random... [bam_rmdup_core] processing reference chrY_KL568157v1_random... [bam_rmdup_core] processing reference chrY_KL568158v1_random... [bam_rmdup_core] processing reference chrY_KL568159v1_random... [bam_rmdup_core] processing reference chrY_KL568160v1_random... [bam_rmdup_core] processing reference chrY_KL568161v1_random... [bam_rmdup_core] processing reference chrY_KL568162v1_random... [bam_rmdup_core] processing reference chrY_KL568163v1_random... [bam_rmdup_core] processing reference chrY_KL568164v1_random... [bam_rmdup_core] processing reference chrY_KL568165v1_random... [bam_rmdup_core] processing reference chrY_KL568166v1_random... [bam_rmdup_core] 1952330 / 20718693 = 0.0942 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 17 Apr 2021 09:44:19: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 17 Apr 2021 09:44:19: #1 read tag files... INFO @ Sat, 17 Apr 2021 09:44:19: #1 read treatment tags... INFO @ Sat, 17 Apr 2021 09:44:31: 1000000 INFO @ Sat, 17 Apr 2021 09:44:41: 2000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 17 Apr 2021 09:44:46: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 17 Apr 2021 09:44:46: #1 read tag files... INFO @ Sat, 17 Apr 2021 09:44:46: #1 read treatment tags... INFO @ Sat, 17 Apr 2021 09:44:53: 3000000 INFO @ Sat, 17 Apr 2021 09:44:56: 1000000 INFO @ Sat, 17 Apr 2021 09:45:05: 2000000 INFO @ Sat, 17 Apr 2021 09:45:09: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 17 Apr 2021 09:45:15: 3000000 INFO @ Sat, 17 Apr 2021 09:45:17: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 17 Apr 2021 09:45:17: #1 read tag files... INFO @ Sat, 17 Apr 2021 09:45:17: #1 read treatment tags... INFO @ Sat, 17 Apr 2021 09:45:24: 5000000 INFO @ Sat, 17 Apr 2021 09:45:25: 4000000 INFO @ Sat, 17 Apr 2021 09:45:31: 1000000 INFO @ Sat, 17 Apr 2021 09:45:35: 5000000 INFO @ Sat, 17 Apr 2021 09:45:35: 6000000 INFO @ Sat, 17 Apr 2021 09:45:45: 2000000 INFO @ Sat, 17 Apr 2021 09:45:45: 6000000 INFO @ Sat, 17 Apr 2021 09:45:48: 7000000 INFO @ Sat, 17 Apr 2021 09:45:58: 3000000 INFO @ Sat, 17 Apr 2021 09:45:59: 7000000 INFO @ Sat, 17 Apr 2021 09:46:02: 8000000 INFO @ Sat, 17 Apr 2021 09:46:11: 4000000 INFO @ Sat, 17 Apr 2021 09:46:13: 8000000 INFO @ Sat, 17 Apr 2021 09:46:15: 9000000 INFO @ Sat, 17 Apr 2021 09:46:25: 5000000 INFO @ Sat, 17 Apr 2021 09:46:25: 9000000 INFO @ Sat, 17 Apr 2021 09:46:28: 10000000 INFO @ Sat, 17 Apr 2021 09:46:39: 10000000 INFO @ Sat, 17 Apr 2021 09:46:39: 6000000 INFO @ Sat, 17 Apr 2021 09:46:41: 11000000 INFO @ Sat, 17 Apr 2021 09:46:52: 11000000 INFO @ Sat, 17 Apr 2021 09:46:54: 7000000 INFO @ Sat, 17 Apr 2021 09:46:55: 12000000 INFO @ Sat, 17 Apr 2021 09:47:05: 12000000 INFO @ Sat, 17 Apr 2021 09:47:08: 13000000 INFO @ Sat, 17 Apr 2021 09:47:10: 8000000 INFO @ Sat, 17 Apr 2021 09:47:17: 13000000 INFO @ Sat, 17 Apr 2021 09:47:20: 14000000 INFO @ Sat, 17 Apr 2021 09:47:23: 9000000 INFO @ Sat, 17 Apr 2021 09:47:31: 14000000 INFO @ Sat, 17 Apr 2021 09:47:37: 10000000 INFO @ Sat, 17 Apr 2021 09:47:37: 15000000 INFO @ Sat, 17 Apr 2021 09:47:46: 15000000 INFO @ Sat, 17 Apr 2021 09:47:48: 11000000 INFO @ Sat, 17 Apr 2021 09:47:57: 16000000 INFO @ Sat, 17 Apr 2021 09:47:58: 12000000 INFO @ Sat, 17 Apr 2021 09:48:09: 16000000 INFO @ Sat, 17 Apr 2021 09:48:09: 13000000 INFO @ Sat, 17 Apr 2021 09:48:13: 17000000 INFO @ Sat, 17 Apr 2021 09:48:23: 14000000 INFO @ Sat, 17 Apr 2021 09:48:28: 18000000 INFO @ Sat, 17 Apr 2021 09:48:29: 17000000 INFO @ Sat, 17 Apr 2021 09:48:38: 15000000 INFO @ Sat, 17 Apr 2021 09:48:41: 19000000 INFO @ Sat, 17 Apr 2021 09:48:45: 18000000 INFO @ Sat, 17 Apr 2021 09:48:51: 16000000 INFO @ Sat, 17 Apr 2021 09:48:52: 20000000 INFO @ Sat, 17 Apr 2021 09:48:57: 19000000 INFO @ Sat, 17 Apr 2021 09:49:04: 17000000 INFO @ Sat, 17 Apr 2021 09:49:04: 21000000 INFO @ Sat, 17 Apr 2021 09:49:09: 20000000 INFO @ Sat, 17 Apr 2021 09:49:16: 22000000 INFO @ Sat, 17 Apr 2021 09:49:18: 18000000 INFO @ Sat, 17 Apr 2021 09:49:22: 21000000 INFO @ Sat, 17 Apr 2021 09:49:28: 23000000 INFO @ Sat, 17 Apr 2021 09:49:33: 19000000 INFO @ Sat, 17 Apr 2021 09:49:34: 22000000 INFO @ Sat, 17 Apr 2021 09:49:39: 24000000 INFO @ Sat, 17 Apr 2021 09:49:46: 23000000 INFO @ Sat, 17 Apr 2021 09:49:47: 20000000 INFO @ Sat, 17 Apr 2021 09:49:52: 25000000 INFO @ Sat, 17 Apr 2021 09:49:58: 21000000 INFO @ Sat, 17 Apr 2021 09:50:00: 24000000 INFO @ Sat, 17 Apr 2021 09:50:04: 26000000 INFO @ Sat, 17 Apr 2021 09:50:11: 22000000 INFO @ Sat, 17 Apr 2021 09:50:13: 25000000 INFO @ Sat, 17 Apr 2021 09:50:19: 27000000 INFO @ Sat, 17 Apr 2021 09:50:25: 26000000 INFO @ Sat, 17 Apr 2021 09:50:26: 23000000 INFO @ Sat, 17 Apr 2021 09:50:34: 28000000 INFO @ Sat, 17 Apr 2021 09:50:37: 24000000 INFO @ Sat, 17 Apr 2021 09:50:39: 27000000 INFO @ Sat, 17 Apr 2021 09:50:47: 25000000 INFO @ Sat, 17 Apr 2021 09:50:48: 29000000 INFO @ Sat, 17 Apr 2021 09:50:54: 28000000 INFO @ Sat, 17 Apr 2021 09:50:59: 26000000 INFO @ Sat, 17 Apr 2021 09:51:01: 30000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 17 Apr 2021 09:51:05: 29000000 INFO @ Sat, 17 Apr 2021 09:51:10: 27000000 INFO @ Sat, 17 Apr 2021 09:51:12: 31000000 INFO @ Sat, 17 Apr 2021 09:51:17: 30000000 INFO @ Sat, 17 Apr 2021 09:51:21: 28000000 INFO @ Sat, 17 Apr 2021 09:51:25: 32000000 INFO @ Sat, 17 Apr 2021 09:51:30: 31000000 INFO @ Sat, 17 Apr 2021 09:51:35: 29000000 INFO @ Sat, 17 Apr 2021 09:51:38: 33000000 INFO @ Sat, 17 Apr 2021 09:51:41: 32000000 INFO @ Sat, 17 Apr 2021 09:51:48: 30000000 INFO @ Sat, 17 Apr 2021 09:51:51: 34000000 INFO @ Sat, 17 Apr 2021 09:51:57: 33000000 INFO @ Sat, 17 Apr 2021 09:52:03: 31000000 INFO @ Sat, 17 Apr 2021 09:52:04: 35000000 INFO @ Sat, 17 Apr 2021 09:52:12: 34000000 INFO @ Sat, 17 Apr 2021 09:52:17: 32000000 INFO @ Sat, 17 Apr 2021 09:52:19: 36000000 INFO @ Sat, 17 Apr 2021 09:52:23: 35000000 INFO @ Sat, 17 Apr 2021 09:52:30: 37000000 INFO @ Sat, 17 Apr 2021 09:52:38: 33000000 INFO @ Sat, 17 Apr 2021 09:52:40: 36000000 INFO @ Sat, 17 Apr 2021 09:52:45: 38000000 INFO @ Sat, 17 Apr 2021 09:52:54: 37000000 INFO @ Sat, 17 Apr 2021 09:52:56: 34000000 INFO @ Sat, 17 Apr 2021 09:53:00: 39000000 INFO @ Sat, 17 Apr 2021 09:53:02: #1 tag size is determined as 75 bps INFO @ Sat, 17 Apr 2021 09:53:02: #1 tag size = 75 INFO @ Sat, 17 Apr 2021 09:53:02: #1 total tags in treatment: 17872455 INFO @ Sat, 17 Apr 2021 09:53:02: #1 user defined the maximum tags... INFO @ Sat, 17 Apr 2021 09:53:02: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 17 Apr 2021 09:53:03: #1 tags after filtering in treatment: 16842216 INFO @ Sat, 17 Apr 2021 09:53:03: #1 Redundant rate of treatment: 0.06 INFO @ Sat, 17 Apr 2021 09:53:03: #1 finished! INFO @ Sat, 17 Apr 2021 09:53:03: #2 Build Peak Model... INFO @ Sat, 17 Apr 2021 09:53:03: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 17 Apr 2021 09:53:05: #2 number of paired peaks: 22476 INFO @ Sat, 17 Apr 2021 09:53:05: start model_add_line... INFO @ Sat, 17 Apr 2021 09:53:05: start X-correlation... INFO @ Sat, 17 Apr 2021 09:53:05: end of X-cor INFO @ Sat, 17 Apr 2021 09:53:05: #2 finished! INFO @ Sat, 17 Apr 2021 09:53:05: #2 predicted fragment length is 255 bps INFO @ Sat, 17 Apr 2021 09:53:05: #2 alternative fragment length(s) may be 255 bps INFO @ Sat, 17 Apr 2021 09:53:05: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.05_model.r INFO @ Sat, 17 Apr 2021 09:53:05: #3 Call peaks... INFO @ Sat, 17 Apr 2021 09:53:05: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 17 Apr 2021 09:53:07: 38000000 BigWig に変換しました。 INFO @ Sat, 17 Apr 2021 09:53:13: 35000000 INFO @ Sat, 17 Apr 2021 09:53:19: 39000000 INFO @ Sat, 17 Apr 2021 09:53:20: #1 tag size is determined as 75 bps INFO @ Sat, 17 Apr 2021 09:53:20: #1 tag size = 75 INFO @ Sat, 17 Apr 2021 09:53:20: #1 total tags in treatment: 17872455 INFO @ Sat, 17 Apr 2021 09:53:20: #1 user defined the maximum tags... INFO @ Sat, 17 Apr 2021 09:53:20: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 17 Apr 2021 09:53:21: #1 tags after filtering in treatment: 16842216 INFO @ Sat, 17 Apr 2021 09:53:21: #1 Redundant rate of treatment: 0.06 INFO @ Sat, 17 Apr 2021 09:53:21: #1 finished! INFO @ Sat, 17 Apr 2021 09:53:21: #2 Build Peak Model... INFO @ Sat, 17 Apr 2021 09:53:21: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 17 Apr 2021 09:53:23: #2 number of paired peaks: 22476 INFO @ Sat, 17 Apr 2021 09:53:23: start model_add_line... INFO @ Sat, 17 Apr 2021 09:53:23: start X-correlation... INFO @ Sat, 17 Apr 2021 09:53:23: end of X-cor INFO @ Sat, 17 Apr 2021 09:53:23: #2 finished! INFO @ Sat, 17 Apr 2021 09:53:23: #2 predicted fragment length is 255 bps INFO @ Sat, 17 Apr 2021 09:53:23: #2 alternative fragment length(s) may be 255 bps INFO @ Sat, 17 Apr 2021 09:53:23: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.10_model.r INFO @ Sat, 17 Apr 2021 09:53:23: #3 Call peaks... INFO @ Sat, 17 Apr 2021 09:53:23: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 17 Apr 2021 09:53:26: 36000000 INFO @ Sat, 17 Apr 2021 09:53:36: 37000000 INFO @ Sat, 17 Apr 2021 09:53:49: 38000000 INFO @ Sat, 17 Apr 2021 09:53:58: #3 Call peaks for each chromosome... INFO @ Sat, 17 Apr 2021 09:54:15: #3 Call peaks for each chromosome... INFO @ Sat, 17 Apr 2021 09:54:18: 39000000 INFO @ Sat, 17 Apr 2021 09:54:23: #1 tag size is determined as 75 bps INFO @ Sat, 17 Apr 2021 09:54:23: #1 tag size = 75 INFO @ Sat, 17 Apr 2021 09:54:23: #1 total tags in treatment: 17872455 INFO @ Sat, 17 Apr 2021 09:54:23: #1 user defined the maximum tags... INFO @ Sat, 17 Apr 2021 09:54:23: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 17 Apr 2021 09:54:24: #1 tags after filtering in treatment: 16842216 INFO @ Sat, 17 Apr 2021 09:54:24: #1 Redundant rate of treatment: 0.06 INFO @ Sat, 17 Apr 2021 09:54:24: #1 finished! INFO @ Sat, 17 Apr 2021 09:54:24: #2 Build Peak Model... INFO @ Sat, 17 Apr 2021 09:54:24: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 17 Apr 2021 09:54:27: #2 number of paired peaks: 22476 INFO @ Sat, 17 Apr 2021 09:54:27: start model_add_line... INFO @ Sat, 17 Apr 2021 09:54:27: start X-correlation... INFO @ Sat, 17 Apr 2021 09:54:27: end of X-cor INFO @ Sat, 17 Apr 2021 09:54:27: #2 finished! INFO @ Sat, 17 Apr 2021 09:54:27: #2 predicted fragment length is 255 bps INFO @ Sat, 17 Apr 2021 09:54:27: #2 alternative fragment length(s) may be 255 bps INFO @ Sat, 17 Apr 2021 09:54:27: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.20_model.r INFO @ Sat, 17 Apr 2021 09:54:27: #3 Call peaks... INFO @ Sat, 17 Apr 2021 09:54:27: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 17 Apr 2021 09:54:29: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.05_peaks.xls INFO @ Sat, 17 Apr 2021 09:54:29: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.05_peaks.narrowPeak INFO @ Sat, 17 Apr 2021 09:54:29: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.05_summits.bed INFO @ Sat, 17 Apr 2021 09:54:29: Done! pass1 - making usageList (64 chroms): 16 millis pass2 - checking and writing primary data (9156 records, 4 fields): 48 millis CompletedMACS2peakCalling INFO @ Sat, 17 Apr 2021 09:54:47: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.10_peaks.xls INFO @ Sat, 17 Apr 2021 09:54:47: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.10_peaks.narrowPeak INFO @ Sat, 17 Apr 2021 09:54:47: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.10_summits.bed INFO @ Sat, 17 Apr 2021 09:54:47: Done! pass1 - making usageList (47 chroms): 5 millis pass2 - checking and writing primary data (4641 records, 4 fields): 23 millis CompletedMACS2peakCalling INFO @ Sat, 17 Apr 2021 09:55:24: #3 Call peaks for each chromosome... INFO @ Sat, 17 Apr 2021 09:55:58: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.20_peaks.xls INFO @ Sat, 17 Apr 2021 09:55:58: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.20_peaks.narrowPeak INFO @ Sat, 17 Apr 2021 09:55:58: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8342838/SRX8342838.20_summits.bed INFO @ Sat, 17 Apr 2021 09:55:58: Done! pass1 - making usageList (29 chroms): 4 millis pass2 - checking and writing primary data (1158 records, 4 fields): 10 millis CompletedMACS2peakCalling