Job ID = 8184622 SRX = SRX8047631 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-08-10T05:02:54 prefetch.2.10.7: 1) Downloading 'SRR11471355'... 2020-08-10T05:02:54 prefetch.2.10.7: Downloading via HTTPS... 2020-08-10T05:05:49 prefetch.2.10.7: HTTPS download succeed 2020-08-10T05:05:49 prefetch.2.10.7: 1) 'SRR11471355' was downloaded successfully Read 53522614 spots for SRR11471355/SRR11471355.sra Written 53522614 spots for SRR11471355/SRR11471355.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:43:27 53522614 reads; of these: 53522614 (100.00%) were unpaired; of these: 1347704 (2.52%) aligned 0 times 37414872 (69.90%) aligned exactly 1 time 14760038 (27.58%) aligned >1 times 97.48% overall alignment rate Time searching: 00:43:28 Overall time: 00:43:28 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 24 files... [bam_rmdupse_core] 1899362 / 52174910 = 0.0364 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 15:05:39: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 15:05:39: #1 read tag files... INFO @ Mon, 10 Aug 2020 15:05:39: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 15:05:44: 1000000 INFO @ Mon, 10 Aug 2020 15:05:49: 2000000 INFO @ Mon, 10 Aug 2020 15:05:54: 3000000 INFO @ Mon, 10 Aug 2020 15:05:59: 4000000 INFO @ Mon, 10 Aug 2020 15:06:04: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 15:06:09: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 15:06:09: #1 read tag files... INFO @ Mon, 10 Aug 2020 15:06:09: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 15:06:09: 6000000 INFO @ Mon, 10 Aug 2020 15:06:14: 1000000 INFO @ Mon, 10 Aug 2020 15:06:14: 7000000 INFO @ Mon, 10 Aug 2020 15:06:19: 2000000 INFO @ Mon, 10 Aug 2020 15:06:19: 8000000 INFO @ Mon, 10 Aug 2020 15:06:25: 3000000 INFO @ Mon, 10 Aug 2020 15:06:25: 9000000 INFO @ Mon, 10 Aug 2020 15:06:30: 4000000 INFO @ Mon, 10 Aug 2020 15:06:30: 10000000 INFO @ Mon, 10 Aug 2020 15:06:35: 5000000 INFO @ Mon, 10 Aug 2020 15:06:35: 11000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 15:06:39: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 15:06:39: #1 read tag files... INFO @ Mon, 10 Aug 2020 15:06:39: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 15:06:40: 6000000 INFO @ Mon, 10 Aug 2020 15:06:40: 12000000 INFO @ Mon, 10 Aug 2020 15:06:44: 1000000 INFO @ Mon, 10 Aug 2020 15:06:46: 7000000 INFO @ Mon, 10 Aug 2020 15:06:46: 13000000 INFO @ Mon, 10 Aug 2020 15:06:50: 2000000 INFO @ Mon, 10 Aug 2020 15:06:51: 8000000 INFO @ Mon, 10 Aug 2020 15:06:51: 14000000 INFO @ Mon, 10 Aug 2020 15:06:55: 3000000 INFO @ Mon, 10 Aug 2020 15:06:56: 9000000 INFO @ Mon, 10 Aug 2020 15:06:56: 15000000 INFO @ Mon, 10 Aug 2020 15:07:00: 4000000 INFO @ Mon, 10 Aug 2020 15:07:01: 10000000 INFO @ Mon, 10 Aug 2020 15:07:02: 16000000 INFO @ Mon, 10 Aug 2020 15:07:05: 5000000 INFO @ Mon, 10 Aug 2020 15:07:07: 11000000 INFO @ Mon, 10 Aug 2020 15:07:07: 17000000 INFO @ Mon, 10 Aug 2020 15:07:11: 6000000 INFO @ Mon, 10 Aug 2020 15:07:12: 12000000 INFO @ Mon, 10 Aug 2020 15:07:12: 18000000 INFO @ Mon, 10 Aug 2020 15:07:16: 7000000 INFO @ Mon, 10 Aug 2020 15:07:17: 13000000 INFO @ Mon, 10 Aug 2020 15:07:17: 19000000 INFO @ Mon, 10 Aug 2020 15:07:21: 8000000 INFO @ Mon, 10 Aug 2020 15:07:22: 14000000 INFO @ Mon, 10 Aug 2020 15:07:23: 20000000 INFO @ Mon, 10 Aug 2020 15:07:27: 9000000 INFO @ Mon, 10 Aug 2020 15:07:27: 15000000 INFO @ Mon, 10 Aug 2020 15:07:28: 21000000 INFO @ Mon, 10 Aug 2020 15:07:32: 10000000 INFO @ Mon, 10 Aug 2020 15:07:33: 16000000 INFO @ Mon, 10 Aug 2020 15:07:33: 22000000 INFO @ Mon, 10 Aug 2020 15:07:37: 11000000 INFO @ Mon, 10 Aug 2020 15:07:38: 17000000 INFO @ Mon, 10 Aug 2020 15:07:38: 23000000 INFO @ Mon, 10 Aug 2020 15:07:43: 12000000 INFO @ Mon, 10 Aug 2020 15:07:43: 18000000 INFO @ Mon, 10 Aug 2020 15:07:44: 24000000 INFO @ Mon, 10 Aug 2020 15:07:48: 13000000 INFO @ Mon, 10 Aug 2020 15:07:48: 19000000 INFO @ Mon, 10 Aug 2020 15:07:49: 25000000 INFO @ Mon, 10 Aug 2020 15:07:53: 14000000 INFO @ Mon, 10 Aug 2020 15:07:54: 20000000 INFO @ Mon, 10 Aug 2020 15:07:55: 26000000 INFO @ Mon, 10 Aug 2020 15:07:58: 15000000 INFO @ Mon, 10 Aug 2020 15:08:00: 21000000 INFO @ Mon, 10 Aug 2020 15:08:00: 27000000 INFO @ Mon, 10 Aug 2020 15:08:04: 16000000 INFO @ Mon, 10 Aug 2020 15:08:05: 22000000 INFO @ Mon, 10 Aug 2020 15:08:06: 28000000 INFO @ Mon, 10 Aug 2020 15:08:09: 17000000 INFO @ Mon, 10 Aug 2020 15:08:10: 23000000 INFO @ Mon, 10 Aug 2020 15:08:12: 29000000 INFO @ Mon, 10 Aug 2020 15:08:15: 18000000 INFO @ Mon, 10 Aug 2020 15:08:16: 24000000 INFO @ Mon, 10 Aug 2020 15:08:17: 30000000 INFO @ Mon, 10 Aug 2020 15:08:20: 19000000 INFO @ Mon, 10 Aug 2020 15:08:21: 25000000 INFO @ Mon, 10 Aug 2020 15:08:23: 31000000 INFO @ Mon, 10 Aug 2020 15:08:25: 20000000 INFO @ Mon, 10 Aug 2020 15:08:27: 26000000 INFO @ Mon, 10 Aug 2020 15:08:28: 32000000 INFO @ Mon, 10 Aug 2020 15:08:31: 21000000 INFO @ Mon, 10 Aug 2020 15:08:32: 27000000 INFO @ Mon, 10 Aug 2020 15:08:34: 33000000 INFO @ Mon, 10 Aug 2020 15:08:36: 22000000 INFO @ Mon, 10 Aug 2020 15:08:37: 28000000 INFO @ Mon, 10 Aug 2020 15:08:39: 34000000 INFO @ Mon, 10 Aug 2020 15:08:41: 23000000 INFO @ Mon, 10 Aug 2020 15:08:43: 29000000 INFO @ Mon, 10 Aug 2020 15:08:45: 35000000 INFO @ Mon, 10 Aug 2020 15:08:47: 24000000 INFO @ Mon, 10 Aug 2020 15:08:48: 30000000 INFO @ Mon, 10 Aug 2020 15:08:50: 36000000 INFO @ Mon, 10 Aug 2020 15:08:52: 25000000 INFO @ Mon, 10 Aug 2020 15:08:53: 31000000 INFO @ Mon, 10 Aug 2020 15:08:56: 37000000 INFO @ Mon, 10 Aug 2020 15:08:57: 26000000 INFO @ Mon, 10 Aug 2020 15:08:59: 32000000 INFO @ Mon, 10 Aug 2020 15:09:02: 38000000 INFO @ Mon, 10 Aug 2020 15:09:03: 27000000 INFO @ Mon, 10 Aug 2020 15:09:04: 33000000 INFO @ Mon, 10 Aug 2020 15:09:07: 39000000 INFO @ Mon, 10 Aug 2020 15:09:08: 28000000 INFO @ Mon, 10 Aug 2020 15:09:09: 34000000 INFO @ Mon, 10 Aug 2020 15:09:13: 40000000 INFO @ Mon, 10 Aug 2020 15:09:13: 29000000 INFO @ Mon, 10 Aug 2020 15:09:15: 35000000 INFO @ Mon, 10 Aug 2020 15:09:18: 41000000 INFO @ Mon, 10 Aug 2020 15:09:19: 30000000 INFO @ Mon, 10 Aug 2020 15:09:20: 36000000 INFO @ Mon, 10 Aug 2020 15:09:24: 31000000 INFO @ Mon, 10 Aug 2020 15:09:24: 42000000 INFO @ Mon, 10 Aug 2020 15:09:25: 37000000 INFO @ Mon, 10 Aug 2020 15:09:29: 32000000 INFO @ Mon, 10 Aug 2020 15:09:30: 43000000 INFO @ Mon, 10 Aug 2020 15:09:31: 38000000 INFO @ Mon, 10 Aug 2020 15:09:35: 33000000 INFO @ Mon, 10 Aug 2020 15:09:35: 44000000 INFO @ Mon, 10 Aug 2020 15:09:36: 39000000 INFO @ Mon, 10 Aug 2020 15:09:40: 34000000 INFO @ Mon, 10 Aug 2020 15:09:41: 45000000 INFO @ Mon, 10 Aug 2020 15:09:41: 40000000 INFO @ Mon, 10 Aug 2020 15:09:45: 35000000 INFO @ Mon, 10 Aug 2020 15:09:46: 46000000 INFO @ Mon, 10 Aug 2020 15:09:46: 41000000 INFO @ Mon, 10 Aug 2020 15:09:51: 36000000 INFO @ Mon, 10 Aug 2020 15:09:52: 42000000 INFO @ Mon, 10 Aug 2020 15:09:52: 47000000 INFO @ Mon, 10 Aug 2020 15:09:56: 37000000 INFO @ Mon, 10 Aug 2020 15:09:57: 43000000 INFO @ Mon, 10 Aug 2020 15:09:58: 48000000 INFO @ Mon, 10 Aug 2020 15:10:01: 38000000 INFO @ Mon, 10 Aug 2020 15:10:02: 44000000 INFO @ Mon, 10 Aug 2020 15:10:04: 49000000 INFO @ Mon, 10 Aug 2020 15:10:07: 39000000 INFO @ Mon, 10 Aug 2020 15:10:08: 45000000 INFO @ Mon, 10 Aug 2020 15:10:10: 50000000 INFO @ Mon, 10 Aug 2020 15:10:12: 40000000 INFO @ Mon, 10 Aug 2020 15:10:12: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 15:10:12: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 15:10:12: #1 total tags in treatment: 50275548 INFO @ Mon, 10 Aug 2020 15:10:12: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 15:10:12: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 15:10:13: 46000000 INFO @ Mon, 10 Aug 2020 15:10:13: #1 tags after filtering in treatment: 50275495 INFO @ Mon, 10 Aug 2020 15:10:13: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 15:10:13: #1 finished! INFO @ Mon, 10 Aug 2020 15:10:13: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 15:10:13: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 15:10:17: #2 number of paired peaks: 5403 INFO @ Mon, 10 Aug 2020 15:10:17: start model_add_line... INFO @ Mon, 10 Aug 2020 15:10:17: 41000000 INFO @ Mon, 10 Aug 2020 15:10:18: start X-correlation... INFO @ Mon, 10 Aug 2020 15:10:18: end of X-cor INFO @ Mon, 10 Aug 2020 15:10:18: #2 finished! INFO @ Mon, 10 Aug 2020 15:10:18: #2 predicted fragment length is 52 bps INFO @ Mon, 10 Aug 2020 15:10:18: #2 alternative fragment length(s) may be 52 bps INFO @ Mon, 10 Aug 2020 15:10:18: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.05_model.r WARNING @ Mon, 10 Aug 2020 15:10:18: #2 Since the d (52) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 15:10:18: #2 You may need to consider one of the other alternative d(s): 52 WARNING @ Mon, 10 Aug 2020 15:10:18: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 15:10:18: #3 Call peaks... INFO @ Mon, 10 Aug 2020 15:10:18: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 15:10:18: 47000000 INFO @ Mon, 10 Aug 2020 15:10:23: 42000000 INFO @ Mon, 10 Aug 2020 15:10:24: 48000000 INFO @ Mon, 10 Aug 2020 15:10:28: 43000000 INFO @ Mon, 10 Aug 2020 15:10:29: 49000000 INFO @ Mon, 10 Aug 2020 15:10:33: 44000000 INFO @ Mon, 10 Aug 2020 15:10:34: 50000000 INFO @ Mon, 10 Aug 2020 15:10:36: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 15:10:36: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 15:10:36: #1 total tags in treatment: 50275548 INFO @ Mon, 10 Aug 2020 15:10:36: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 15:10:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 15:10:37: #1 tags after filtering in treatment: 50275495 INFO @ Mon, 10 Aug 2020 15:10:37: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 15:10:37: #1 finished! INFO @ Mon, 10 Aug 2020 15:10:37: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 15:10:37: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 15:10:39: 45000000 INFO @ Mon, 10 Aug 2020 15:10:41: #2 number of paired peaks: 5403 INFO @ Mon, 10 Aug 2020 15:10:41: start model_add_line... INFO @ Mon, 10 Aug 2020 15:10:42: start X-correlation... INFO @ Mon, 10 Aug 2020 15:10:42: end of X-cor INFO @ Mon, 10 Aug 2020 15:10:42: #2 finished! INFO @ Mon, 10 Aug 2020 15:10:42: #2 predicted fragment length is 52 bps INFO @ Mon, 10 Aug 2020 15:10:42: #2 alternative fragment length(s) may be 52 bps INFO @ Mon, 10 Aug 2020 15:10:42: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.10_model.r WARNING @ Mon, 10 Aug 2020 15:10:42: #2 Since the d (52) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 15:10:42: #2 You may need to consider one of the other alternative d(s): 52 WARNING @ Mon, 10 Aug 2020 15:10:42: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 15:10:42: #3 Call peaks... INFO @ Mon, 10 Aug 2020 15:10:42: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 15:10:44: 46000000 INFO @ Mon, 10 Aug 2020 15:10:49: 47000000 INFO @ Mon, 10 Aug 2020 15:10:54: 48000000 INFO @ Mon, 10 Aug 2020 15:10:59: 49000000 INFO @ Mon, 10 Aug 2020 15:11:04: 50000000 INFO @ Mon, 10 Aug 2020 15:11:06: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 15:11:06: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 15:11:06: #1 total tags in treatment: 50275548 INFO @ Mon, 10 Aug 2020 15:11:06: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 15:11:06: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 15:11:07: #1 tags after filtering in treatment: 50275495 INFO @ Mon, 10 Aug 2020 15:11:07: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 15:11:07: #1 finished! INFO @ Mon, 10 Aug 2020 15:11:07: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 15:11:07: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 15:11:11: #2 number of paired peaks: 5403 INFO @ Mon, 10 Aug 2020 15:11:11: start model_add_line... INFO @ Mon, 10 Aug 2020 15:11:11: start X-correlation... INFO @ Mon, 10 Aug 2020 15:11:11: end of X-cor INFO @ Mon, 10 Aug 2020 15:11:11: #2 finished! INFO @ Mon, 10 Aug 2020 15:11:11: #2 predicted fragment length is 52 bps INFO @ Mon, 10 Aug 2020 15:11:11: #2 alternative fragment length(s) may be 52 bps INFO @ Mon, 10 Aug 2020 15:11:11: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.20_model.r WARNING @ Mon, 10 Aug 2020 15:11:11: #2 Since the d (52) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 15:11:11: #2 You may need to consider one of the other alternative d(s): 52 WARNING @ Mon, 10 Aug 2020 15:11:11: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 15:11:11: #3 Call peaks... INFO @ Mon, 10 Aug 2020 15:11:11: #3 Pre-compute pvalue-qvalue table... BedGraph に変換しました。 BigWig に変換中... INFO @ Mon, 10 Aug 2020 15:12:09: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 15:12:34: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 15:13:03: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 15:13:04: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.05_peaks.xls INFO @ Mon, 10 Aug 2020 15:13:04: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.05_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 15:13:04: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.05_summits.bed INFO @ Mon, 10 Aug 2020 15:13:04: Done! pass1 - making usageList (61 chroms): 2 millis pass2 - checking and writing primary data (3885 records, 4 fields): 6 millis CompletedMACS2peakCalling BigWig に変換しました。 INFO @ Mon, 10 Aug 2020 15:13:30: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.10_peaks.xls INFO @ Mon, 10 Aug 2020 15:13:30: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.10_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 15:13:30: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.10_summits.bed INFO @ Mon, 10 Aug 2020 15:13:30: Done! pass1 - making usageList (52 chroms): 1 millis pass2 - checking and writing primary data (1750 records, 4 fields): 5 millis CompletedMACS2peakCalling INFO @ Mon, 10 Aug 2020 15:13:58: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.20_peaks.xls INFO @ Mon, 10 Aug 2020 15:13:59: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.20_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 15:14:00: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047631/SRX8047631.20_summits.bed INFO @ Mon, 10 Aug 2020 15:14:00: Done! pass1 - making usageList (40 chroms): 1 millis pass2 - checking and writing primary data (750 records, 4 fields): 3 millis CompletedMACS2peakCalling