Job ID = 8184610 SRX = SRX8047623 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-08-10T04:55:34 prefetch.2.10.7: 1) Downloading 'SRR11471347'... 2020-08-10T04:55:34 prefetch.2.10.7: Downloading via HTTPS... 2020-08-10T04:57:55 prefetch.2.10.7: HTTPS download succeed 2020-08-10T04:57:55 prefetch.2.10.7: 1) 'SRR11471347' was downloaded successfully Read 55836098 spots for SRR11471347/SRR11471347.sra Written 55836098 spots for SRR11471347/SRR11471347.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:02 Time loading mirror index: 00:00:01 Multiseed full-index search: 00:47:17 55836098 reads; of these: 55836098 (100.00%) were unpaired; of these: 1401645 (2.51%) aligned 0 times 39027749 (69.90%) aligned exactly 1 time 15406704 (27.59%) aligned >1 times 97.49% overall alignment rate Time searching: 00:47:22 Overall time: 00:47:22 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 24 files... [bam_rmdupse_core] 2924536 / 54434453 = 0.0537 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 15:02:48: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 15:02:48: #1 read tag files... INFO @ Mon, 10 Aug 2020 15:02:48: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 15:02:53: 1000000 INFO @ Mon, 10 Aug 2020 15:02:59: 2000000 INFO @ Mon, 10 Aug 2020 15:03:04: 3000000 INFO @ Mon, 10 Aug 2020 15:03:09: 4000000 INFO @ Mon, 10 Aug 2020 15:03:14: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 15:03:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 15:03:18: #1 read tag files... INFO @ Mon, 10 Aug 2020 15:03:18: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 15:03:20: 6000000 INFO @ Mon, 10 Aug 2020 15:03:24: 1000000 INFO @ Mon, 10 Aug 2020 15:03:26: 7000000 INFO @ Mon, 10 Aug 2020 15:03:30: 2000000 INFO @ Mon, 10 Aug 2020 15:03:32: 8000000 INFO @ Mon, 10 Aug 2020 15:03:37: 3000000 INFO @ Mon, 10 Aug 2020 15:03:38: 9000000 INFO @ Mon, 10 Aug 2020 15:03:43: 4000000 INFO @ Mon, 10 Aug 2020 15:03:43: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 15:03:48: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 15:03:48: #1 read tag files... INFO @ Mon, 10 Aug 2020 15:03:48: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 15:03:49: 11000000 INFO @ Mon, 10 Aug 2020 15:03:50: 5000000 INFO @ Mon, 10 Aug 2020 15:03:54: 1000000 INFO @ Mon, 10 Aug 2020 15:03:55: 12000000 INFO @ Mon, 10 Aug 2020 15:03:56: 6000000 INFO @ Mon, 10 Aug 2020 15:04:00: 2000000 INFO @ Mon, 10 Aug 2020 15:04:01: 13000000 INFO @ Mon, 10 Aug 2020 15:04:02: 7000000 INFO @ Mon, 10 Aug 2020 15:04:06: 3000000 INFO @ Mon, 10 Aug 2020 15:04:07: 14000000 INFO @ Mon, 10 Aug 2020 15:04:09: 8000000 INFO @ Mon, 10 Aug 2020 15:04:12: 4000000 INFO @ Mon, 10 Aug 2020 15:04:13: 15000000 INFO @ Mon, 10 Aug 2020 15:04:15: 9000000 INFO @ Mon, 10 Aug 2020 15:04:17: 5000000 INFO @ Mon, 10 Aug 2020 15:04:19: 16000000 INFO @ Mon, 10 Aug 2020 15:04:21: 10000000 INFO @ Mon, 10 Aug 2020 15:04:23: 6000000 INFO @ Mon, 10 Aug 2020 15:04:25: 17000000 INFO @ Mon, 10 Aug 2020 15:04:28: 11000000 INFO @ Mon, 10 Aug 2020 15:04:29: 7000000 INFO @ Mon, 10 Aug 2020 15:04:30: 18000000 INFO @ Mon, 10 Aug 2020 15:04:34: 12000000 INFO @ Mon, 10 Aug 2020 15:04:35: 8000000 INFO @ Mon, 10 Aug 2020 15:04:36: 19000000 INFO @ Mon, 10 Aug 2020 15:04:40: 13000000 INFO @ Mon, 10 Aug 2020 15:04:41: 9000000 INFO @ Mon, 10 Aug 2020 15:04:42: 20000000 INFO @ Mon, 10 Aug 2020 15:04:47: 14000000 INFO @ Mon, 10 Aug 2020 15:04:47: 10000000 INFO @ Mon, 10 Aug 2020 15:04:48: 21000000 INFO @ Mon, 10 Aug 2020 15:04:53: 11000000 INFO @ Mon, 10 Aug 2020 15:04:53: 15000000 INFO @ Mon, 10 Aug 2020 15:04:54: 22000000 INFO @ Mon, 10 Aug 2020 15:04:59: 12000000 INFO @ Mon, 10 Aug 2020 15:04:59: 16000000 INFO @ Mon, 10 Aug 2020 15:05:00: 23000000 INFO @ Mon, 10 Aug 2020 15:05:05: 13000000 INFO @ Mon, 10 Aug 2020 15:05:06: 17000000 INFO @ Mon, 10 Aug 2020 15:05:06: 24000000 INFO @ Mon, 10 Aug 2020 15:05:11: 14000000 INFO @ Mon, 10 Aug 2020 15:05:12: 25000000 INFO @ Mon, 10 Aug 2020 15:05:12: 18000000 INFO @ Mon, 10 Aug 2020 15:05:17: 15000000 INFO @ Mon, 10 Aug 2020 15:05:18: 26000000 INFO @ Mon, 10 Aug 2020 15:05:19: 19000000 INFO @ Mon, 10 Aug 2020 15:05:23: 16000000 INFO @ Mon, 10 Aug 2020 15:05:24: 27000000 INFO @ Mon, 10 Aug 2020 15:05:25: 20000000 INFO @ Mon, 10 Aug 2020 15:05:29: 17000000 INFO @ Mon, 10 Aug 2020 15:05:30: 28000000 INFO @ Mon, 10 Aug 2020 15:05:31: 21000000 INFO @ Mon, 10 Aug 2020 15:05:35: 18000000 INFO @ Mon, 10 Aug 2020 15:05:36: 29000000 INFO @ Mon, 10 Aug 2020 15:05:38: 22000000 INFO @ Mon, 10 Aug 2020 15:05:41: 19000000 INFO @ Mon, 10 Aug 2020 15:05:42: 30000000 INFO @ Mon, 10 Aug 2020 15:05:44: 23000000 INFO @ Mon, 10 Aug 2020 15:05:47: 20000000 INFO @ Mon, 10 Aug 2020 15:05:48: 31000000 INFO @ Mon, 10 Aug 2020 15:05:50: 24000000 INFO @ Mon, 10 Aug 2020 15:05:53: 21000000 INFO @ Mon, 10 Aug 2020 15:05:54: 32000000 INFO @ Mon, 10 Aug 2020 15:05:57: 25000000 INFO @ Mon, 10 Aug 2020 15:05:59: 22000000 INFO @ Mon, 10 Aug 2020 15:06:00: 33000000 INFO @ Mon, 10 Aug 2020 15:06:03: 26000000 INFO @ Mon, 10 Aug 2020 15:06:05: 23000000 INFO @ Mon, 10 Aug 2020 15:06:06: 34000000 INFO @ Mon, 10 Aug 2020 15:06:10: 27000000 INFO @ Mon, 10 Aug 2020 15:06:11: 24000000 INFO @ Mon, 10 Aug 2020 15:06:12: 35000000 INFO @ Mon, 10 Aug 2020 15:06:16: 28000000 INFO @ Mon, 10 Aug 2020 15:06:17: 25000000 INFO @ Mon, 10 Aug 2020 15:06:18: 36000000 INFO @ Mon, 10 Aug 2020 15:06:22: 29000000 INFO @ Mon, 10 Aug 2020 15:06:22: 26000000 INFO @ Mon, 10 Aug 2020 15:06:24: 37000000 INFO @ Mon, 10 Aug 2020 15:06:28: 27000000 INFO @ Mon, 10 Aug 2020 15:06:29: 30000000 INFO @ Mon, 10 Aug 2020 15:06:30: 38000000 INFO @ Mon, 10 Aug 2020 15:06:35: 28000000 INFO @ Mon, 10 Aug 2020 15:06:35: 31000000 INFO @ Mon, 10 Aug 2020 15:06:36: 39000000 INFO @ Mon, 10 Aug 2020 15:06:41: 29000000 INFO @ Mon, 10 Aug 2020 15:06:41: 32000000 INFO @ Mon, 10 Aug 2020 15:06:42: 40000000 INFO @ Mon, 10 Aug 2020 15:06:47: 30000000 INFO @ Mon, 10 Aug 2020 15:06:48: 33000000 INFO @ Mon, 10 Aug 2020 15:06:48: 41000000 INFO @ Mon, 10 Aug 2020 15:06:53: 31000000 INFO @ Mon, 10 Aug 2020 15:06:54: 34000000 INFO @ Mon, 10 Aug 2020 15:06:54: 42000000 INFO @ Mon, 10 Aug 2020 15:06:59: 32000000 INFO @ Mon, 10 Aug 2020 15:07:00: 43000000 INFO @ Mon, 10 Aug 2020 15:07:01: 35000000 INFO @ Mon, 10 Aug 2020 15:07:05: 33000000 INFO @ Mon, 10 Aug 2020 15:07:07: 44000000 INFO @ Mon, 10 Aug 2020 15:07:07: 36000000 INFO @ Mon, 10 Aug 2020 15:07:11: 34000000 INFO @ Mon, 10 Aug 2020 15:07:13: 45000000 INFO @ Mon, 10 Aug 2020 15:07:13: 37000000 INFO @ Mon, 10 Aug 2020 15:07:17: 35000000 INFO @ Mon, 10 Aug 2020 15:07:19: 46000000 INFO @ Mon, 10 Aug 2020 15:07:20: 38000000 INFO @ Mon, 10 Aug 2020 15:07:22: 36000000 INFO @ Mon, 10 Aug 2020 15:07:25: 47000000 INFO @ Mon, 10 Aug 2020 15:07:26: 39000000 INFO @ Mon, 10 Aug 2020 15:07:28: 37000000 INFO @ Mon, 10 Aug 2020 15:07:31: 48000000 INFO @ Mon, 10 Aug 2020 15:07:33: 40000000 INFO @ Mon, 10 Aug 2020 15:07:34: 38000000 INFO @ Mon, 10 Aug 2020 15:07:37: 49000000 INFO @ Mon, 10 Aug 2020 15:07:39: 41000000 INFO @ Mon, 10 Aug 2020 15:07:40: 39000000 INFO @ Mon, 10 Aug 2020 15:07:43: 50000000 INFO @ Mon, 10 Aug 2020 15:07:45: 42000000 INFO @ Mon, 10 Aug 2020 15:07:46: 40000000 INFO @ Mon, 10 Aug 2020 15:07:49: 51000000 INFO @ Mon, 10 Aug 2020 15:07:52: 43000000 INFO @ Mon, 10 Aug 2020 15:07:52: 41000000 INFO @ Mon, 10 Aug 2020 15:07:53: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 15:07:53: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 15:07:53: #1 total tags in treatment: 51509917 INFO @ Mon, 10 Aug 2020 15:07:53: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 15:07:53: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 15:07:54: #1 tags after filtering in treatment: 51509862 INFO @ Mon, 10 Aug 2020 15:07:54: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 15:07:54: #1 finished! INFO @ Mon, 10 Aug 2020 15:07:54: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 15:07:54: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 15:07:58: #2 number of paired peaks: 5577 INFO @ Mon, 10 Aug 2020 15:07:58: start model_add_line... INFO @ Mon, 10 Aug 2020 15:07:58: 42000000 INFO @ Mon, 10 Aug 2020 15:07:58: 44000000 INFO @ Mon, 10 Aug 2020 15:07:58: start X-correlation... INFO @ Mon, 10 Aug 2020 15:07:58: end of X-cor INFO @ Mon, 10 Aug 2020 15:07:58: #2 finished! INFO @ Mon, 10 Aug 2020 15:07:58: #2 predicted fragment length is 52 bps INFO @ Mon, 10 Aug 2020 15:07:58: #2 alternative fragment length(s) may be 52 bps INFO @ Mon, 10 Aug 2020 15:07:58: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.05_model.r WARNING @ Mon, 10 Aug 2020 15:07:58: #2 Since the d (52) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 15:07:58: #2 You may need to consider one of the other alternative d(s): 52 WARNING @ Mon, 10 Aug 2020 15:07:58: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 15:07:58: #3 Call peaks... INFO @ Mon, 10 Aug 2020 15:07:58: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 15:08:04: 43000000 INFO @ Mon, 10 Aug 2020 15:08:05: 45000000 INFO @ Mon, 10 Aug 2020 15:08:10: 44000000 INFO @ Mon, 10 Aug 2020 15:08:11: 46000000 INFO @ Mon, 10 Aug 2020 15:08:16: 45000000 INFO @ Mon, 10 Aug 2020 15:08:18: 47000000 INFO @ Mon, 10 Aug 2020 15:08:22: 46000000 INFO @ Mon, 10 Aug 2020 15:08:25: 48000000 INFO @ Mon, 10 Aug 2020 15:08:28: 47000000 INFO @ Mon, 10 Aug 2020 15:08:31: 49000000 INFO @ Mon, 10 Aug 2020 15:08:34: 48000000 INFO @ Mon, 10 Aug 2020 15:08:38: 50000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Mon, 10 Aug 2020 15:08:40: 49000000 INFO @ Mon, 10 Aug 2020 15:08:45: 51000000 INFO @ Mon, 10 Aug 2020 15:08:46: 50000000 INFO @ Mon, 10 Aug 2020 15:08:49: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 15:08:49: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 15:08:49: #1 total tags in treatment: 51509917 INFO @ Mon, 10 Aug 2020 15:08:49: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 15:08:49: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 15:08:50: #1 tags after filtering in treatment: 51509862 INFO @ Mon, 10 Aug 2020 15:08:50: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 15:08:50: #1 finished! INFO @ Mon, 10 Aug 2020 15:08:50: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 15:08:50: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 15:08:52: 51000000 INFO @ Mon, 10 Aug 2020 15:08:54: #2 number of paired peaks: 5577 INFO @ Mon, 10 Aug 2020 15:08:54: start model_add_line... INFO @ Mon, 10 Aug 2020 15:08:54: start X-correlation... INFO @ Mon, 10 Aug 2020 15:08:54: end of X-cor INFO @ Mon, 10 Aug 2020 15:08:54: #2 finished! INFO @ Mon, 10 Aug 2020 15:08:54: #2 predicted fragment length is 52 bps INFO @ Mon, 10 Aug 2020 15:08:54: #2 alternative fragment length(s) may be 52 bps INFO @ Mon, 10 Aug 2020 15:08:54: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.10_model.r WARNING @ Mon, 10 Aug 2020 15:08:54: #2 Since the d (52) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 15:08:54: #2 You may need to consider one of the other alternative d(s): 52 WARNING @ Mon, 10 Aug 2020 15:08:54: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 15:08:54: #3 Call peaks... INFO @ Mon, 10 Aug 2020 15:08:54: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 15:08:55: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 15:08:55: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 15:08:55: #1 total tags in treatment: 51509917 INFO @ Mon, 10 Aug 2020 15:08:55: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 15:08:55: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 15:08:56: #1 tags after filtering in treatment: 51509862 INFO @ Mon, 10 Aug 2020 15:08:56: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 15:08:56: #1 finished! INFO @ Mon, 10 Aug 2020 15:08:56: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 15:08:56: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 15:09:00: #2 number of paired peaks: 5577 INFO @ Mon, 10 Aug 2020 15:09:00: start model_add_line... INFO @ Mon, 10 Aug 2020 15:09:00: start X-correlation... INFO @ Mon, 10 Aug 2020 15:09:00: end of X-cor INFO @ Mon, 10 Aug 2020 15:09:00: #2 finished! INFO @ Mon, 10 Aug 2020 15:09:00: #2 predicted fragment length is 52 bps INFO @ Mon, 10 Aug 2020 15:09:00: #2 alternative fragment length(s) may be 52 bps INFO @ Mon, 10 Aug 2020 15:09:00: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.20_model.r WARNING @ Mon, 10 Aug 2020 15:09:00: #2 Since the d (52) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 15:09:00: #2 You may need to consider one of the other alternative d(s): 52 WARNING @ Mon, 10 Aug 2020 15:09:00: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 15:09:00: #3 Call peaks... INFO @ Mon, 10 Aug 2020 15:09:00: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 15:09:50: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 15:10:43: #3 Call peaks for each chromosome... BigWig に変換しました。 INFO @ Mon, 10 Aug 2020 15:10:47: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.05_peaks.xls INFO @ Mon, 10 Aug 2020 15:10:47: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.05_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 15:10:48: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.05_summits.bed INFO @ Mon, 10 Aug 2020 15:10:48: Done! pass1 - making usageList (64 chroms): 2 millis pass2 - checking and writing primary data (3951 records, 4 fields): 9 millis CompletedMACS2peakCalling INFO @ Mon, 10 Aug 2020 15:10:51: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 15:11:39: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.10_peaks.xls INFO @ Mon, 10 Aug 2020 15:11:39: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.10_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 15:11:39: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.10_summits.bed INFO @ Mon, 10 Aug 2020 15:11:39: Done! pass1 - making usageList (47 chroms): 1 millis pass2 - checking and writing primary data (1833 records, 4 fields): 4 millis CompletedMACS2peakCalling INFO @ Mon, 10 Aug 2020 15:11:48: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.20_peaks.xls INFO @ Mon, 10 Aug 2020 15:11:48: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.20_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 15:11:48: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047623/SRX8047623.20_summits.bed INFO @ Mon, 10 Aug 2020 15:11:48: Done! pass1 - making usageList (40 chroms): 0 millis pass2 - checking and writing primary data (773 records, 4 fields): 3 millis CompletedMACS2peakCalling