Job ID = 8184609 SRX = SRX8047622 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-08-10T04:55:07 prefetch.2.10.7: 1) Downloading 'SRR11471346'... 2020-08-10T04:55:07 prefetch.2.10.7: Downloading via HTTPS... 2020-08-10T04:57:29 prefetch.2.10.7: HTTPS download succeed 2020-08-10T04:57:29 prefetch.2.10.7: 1) 'SRR11471346' was downloaded successfully Read 58362869 spots for SRR11471346/SRR11471346.sra Written 58362869 spots for SRR11471346/SRR11471346.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:02 Time loading mirror index: 00:00:01 Multiseed full-index search: 02:23:55 58362869 reads; of these: 58362869 (100.00%) were unpaired; of these: 4257475 (7.29%) aligned 0 times 23155370 (39.67%) aligned exactly 1 time 30950024 (53.03%) aligned >1 times 92.71% overall alignment rate Time searching: 02:23:59 Overall time: 02:23:59 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 24 files... [bam_rmdupse_core] 4778181 / 54105394 = 0.0883 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 16:38:17: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 16:38:17: #1 read tag files... INFO @ Mon, 10 Aug 2020 16:38:17: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 16:38:24: 1000000 INFO @ Mon, 10 Aug 2020 16:38:30: 2000000 INFO @ Mon, 10 Aug 2020 16:38:36: 3000000 INFO @ Mon, 10 Aug 2020 16:38:42: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 16:38:46: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 16:38:46: #1 read tag files... INFO @ Mon, 10 Aug 2020 16:38:46: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 16:38:49: 5000000 INFO @ Mon, 10 Aug 2020 16:38:53: 1000000 INFO @ Mon, 10 Aug 2020 16:38:56: 6000000 INFO @ Mon, 10 Aug 2020 16:39:01: 2000000 INFO @ Mon, 10 Aug 2020 16:39:03: 7000000 INFO @ Mon, 10 Aug 2020 16:39:09: 3000000 INFO @ Mon, 10 Aug 2020 16:39:11: 8000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 16:39:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 16:39:16: #1 read tag files... INFO @ Mon, 10 Aug 2020 16:39:16: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 16:39:17: 4000000 INFO @ Mon, 10 Aug 2020 16:39:18: 9000000 INFO @ Mon, 10 Aug 2020 16:39:23: 1000000 INFO @ Mon, 10 Aug 2020 16:39:25: 5000000 INFO @ Mon, 10 Aug 2020 16:39:25: 10000000 INFO @ Mon, 10 Aug 2020 16:39:31: 2000000 INFO @ Mon, 10 Aug 2020 16:39:32: 6000000 INFO @ Mon, 10 Aug 2020 16:39:33: 11000000 INFO @ Mon, 10 Aug 2020 16:39:38: 3000000 INFO @ Mon, 10 Aug 2020 16:39:40: 7000000 INFO @ Mon, 10 Aug 2020 16:39:40: 12000000 INFO @ Mon, 10 Aug 2020 16:39:45: 4000000 INFO @ Mon, 10 Aug 2020 16:39:48: 13000000 INFO @ Mon, 10 Aug 2020 16:39:48: 8000000 INFO @ Mon, 10 Aug 2020 16:39:53: 5000000 INFO @ Mon, 10 Aug 2020 16:39:55: 14000000 INFO @ Mon, 10 Aug 2020 16:39:56: 9000000 INFO @ Mon, 10 Aug 2020 16:40:00: 6000000 INFO @ Mon, 10 Aug 2020 16:40:02: 15000000 INFO @ Mon, 10 Aug 2020 16:40:04: 10000000 INFO @ Mon, 10 Aug 2020 16:40:08: 7000000 INFO @ Mon, 10 Aug 2020 16:40:10: 16000000 INFO @ Mon, 10 Aug 2020 16:40:11: 11000000 INFO @ Mon, 10 Aug 2020 16:40:15: 8000000 INFO @ Mon, 10 Aug 2020 16:40:17: 17000000 INFO @ Mon, 10 Aug 2020 16:40:20: 12000000 INFO @ Mon, 10 Aug 2020 16:40:22: 9000000 INFO @ Mon, 10 Aug 2020 16:40:24: 18000000 INFO @ Mon, 10 Aug 2020 16:40:27: 13000000 INFO @ Mon, 10 Aug 2020 16:40:30: 10000000 INFO @ Mon, 10 Aug 2020 16:40:32: 19000000 INFO @ Mon, 10 Aug 2020 16:40:35: 14000000 INFO @ Mon, 10 Aug 2020 16:40:37: 11000000 INFO @ Mon, 10 Aug 2020 16:40:39: 20000000 INFO @ Mon, 10 Aug 2020 16:40:43: 15000000 INFO @ Mon, 10 Aug 2020 16:40:45: 12000000 INFO @ Mon, 10 Aug 2020 16:40:46: 21000000 INFO @ Mon, 10 Aug 2020 16:40:51: 16000000 INFO @ Mon, 10 Aug 2020 16:40:52: 13000000 INFO @ Mon, 10 Aug 2020 16:40:54: 22000000 INFO @ Mon, 10 Aug 2020 16:40:59: 17000000 INFO @ Mon, 10 Aug 2020 16:40:59: 14000000 INFO @ Mon, 10 Aug 2020 16:41:01: 23000000 INFO @ Mon, 10 Aug 2020 16:41:06: 18000000 INFO @ Mon, 10 Aug 2020 16:41:07: 15000000 INFO @ Mon, 10 Aug 2020 16:41:08: 24000000 INFO @ Mon, 10 Aug 2020 16:41:14: 16000000 INFO @ Mon, 10 Aug 2020 16:41:14: 19000000 INFO @ Mon, 10 Aug 2020 16:41:16: 25000000 INFO @ Mon, 10 Aug 2020 16:41:22: 17000000 INFO @ Mon, 10 Aug 2020 16:41:22: 20000000 INFO @ Mon, 10 Aug 2020 16:41:23: 26000000 INFO @ Mon, 10 Aug 2020 16:41:29: 18000000 INFO @ Mon, 10 Aug 2020 16:41:30: 21000000 INFO @ Mon, 10 Aug 2020 16:41:30: 27000000 INFO @ Mon, 10 Aug 2020 16:41:36: 19000000 INFO @ Mon, 10 Aug 2020 16:41:38: 28000000 INFO @ Mon, 10 Aug 2020 16:41:38: 22000000 INFO @ Mon, 10 Aug 2020 16:41:44: 20000000 INFO @ Mon, 10 Aug 2020 16:41:45: 29000000 INFO @ Mon, 10 Aug 2020 16:41:46: 23000000 INFO @ Mon, 10 Aug 2020 16:41:51: 21000000 INFO @ Mon, 10 Aug 2020 16:41:52: 30000000 INFO @ Mon, 10 Aug 2020 16:41:54: 24000000 INFO @ Mon, 10 Aug 2020 16:41:58: 22000000 INFO @ Mon, 10 Aug 2020 16:42:00: 31000000 INFO @ Mon, 10 Aug 2020 16:42:02: 25000000 INFO @ Mon, 10 Aug 2020 16:42:06: 23000000 INFO @ Mon, 10 Aug 2020 16:42:07: 32000000 INFO @ Mon, 10 Aug 2020 16:42:10: 26000000 INFO @ Mon, 10 Aug 2020 16:42:13: 24000000 INFO @ Mon, 10 Aug 2020 16:42:14: 33000000 INFO @ Mon, 10 Aug 2020 16:42:18: 27000000 INFO @ Mon, 10 Aug 2020 16:42:20: 25000000 INFO @ Mon, 10 Aug 2020 16:42:21: 34000000 INFO @ Mon, 10 Aug 2020 16:42:26: 28000000 INFO @ Mon, 10 Aug 2020 16:42:28: 26000000 INFO @ Mon, 10 Aug 2020 16:42:29: 35000000 INFO @ Mon, 10 Aug 2020 16:42:34: 29000000 INFO @ Mon, 10 Aug 2020 16:42:35: 27000000 INFO @ Mon, 10 Aug 2020 16:42:36: 36000000 INFO @ Mon, 10 Aug 2020 16:42:42: 30000000 INFO @ Mon, 10 Aug 2020 16:42:42: 28000000 INFO @ Mon, 10 Aug 2020 16:42:44: 37000000 INFO @ Mon, 10 Aug 2020 16:42:50: 31000000 INFO @ Mon, 10 Aug 2020 16:42:50: 29000000 INFO @ Mon, 10 Aug 2020 16:42:51: 38000000 INFO @ Mon, 10 Aug 2020 16:42:57: 30000000 INFO @ Mon, 10 Aug 2020 16:42:57: 32000000 INFO @ Mon, 10 Aug 2020 16:42:58: 39000000 INFO @ Mon, 10 Aug 2020 16:43:05: 31000000 INFO @ Mon, 10 Aug 2020 16:43:05: 33000000 INFO @ Mon, 10 Aug 2020 16:43:06: 40000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Mon, 10 Aug 2020 16:43:12: 32000000 INFO @ Mon, 10 Aug 2020 16:43:13: 34000000 INFO @ Mon, 10 Aug 2020 16:43:13: 41000000 INFO @ Mon, 10 Aug 2020 16:43:20: 33000000 INFO @ Mon, 10 Aug 2020 16:43:21: 42000000 INFO @ Mon, 10 Aug 2020 16:43:21: 35000000 INFO @ Mon, 10 Aug 2020 16:43:27: 34000000 INFO @ Mon, 10 Aug 2020 16:43:28: 43000000 INFO @ Mon, 10 Aug 2020 16:43:29: 36000000 INFO @ Mon, 10 Aug 2020 16:43:35: 35000000 INFO @ Mon, 10 Aug 2020 16:43:36: 44000000 INFO @ Mon, 10 Aug 2020 16:43:37: 37000000 INFO @ Mon, 10 Aug 2020 16:43:42: 36000000 INFO @ Mon, 10 Aug 2020 16:43:43: 45000000 INFO @ Mon, 10 Aug 2020 16:43:44: 38000000 INFO @ Mon, 10 Aug 2020 16:43:49: 37000000 INFO @ Mon, 10 Aug 2020 16:43:50: 46000000 INFO @ Mon, 10 Aug 2020 16:43:52: 39000000 INFO @ Mon, 10 Aug 2020 16:43:57: 38000000 INFO @ Mon, 10 Aug 2020 16:43:58: 47000000 INFO @ Mon, 10 Aug 2020 16:44:00: 40000000 INFO @ Mon, 10 Aug 2020 16:44:04: 39000000 INFO @ Mon, 10 Aug 2020 16:44:05: 48000000 INFO @ Mon, 10 Aug 2020 16:44:08: 41000000 INFO @ Mon, 10 Aug 2020 16:44:12: 40000000 INFO @ Mon, 10 Aug 2020 16:44:13: 49000000 INFO @ Mon, 10 Aug 2020 16:44:15: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 16:44:15: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 16:44:15: #1 total tags in treatment: 49327213 INFO @ Mon, 10 Aug 2020 16:44:15: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 16:44:15: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 16:44:16: 42000000 INFO @ Mon, 10 Aug 2020 16:44:16: #1 tags after filtering in treatment: 49327160 INFO @ Mon, 10 Aug 2020 16:44:16: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 16:44:16: #1 finished! INFO @ Mon, 10 Aug 2020 16:44:16: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 16:44:16: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 16:44:19: 41000000 INFO @ Mon, 10 Aug 2020 16:44:22: #2 number of paired peaks: 44723 INFO @ Mon, 10 Aug 2020 16:44:22: start model_add_line... INFO @ Mon, 10 Aug 2020 16:44:22: start X-correlation... INFO @ Mon, 10 Aug 2020 16:44:22: end of X-cor INFO @ Mon, 10 Aug 2020 16:44:22: #2 finished! INFO @ Mon, 10 Aug 2020 16:44:22: #2 predicted fragment length is 58 bps INFO @ Mon, 10 Aug 2020 16:44:22: #2 alternative fragment length(s) may be 58 bps INFO @ Mon, 10 Aug 2020 16:44:22: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.05_model.r WARNING @ Mon, 10 Aug 2020 16:44:22: #2 Since the d (58) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 16:44:22: #2 You may need to consider one of the other alternative d(s): 58 WARNING @ Mon, 10 Aug 2020 16:44:22: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 16:44:22: #3 Call peaks... INFO @ Mon, 10 Aug 2020 16:44:22: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 16:44:24: 43000000 INFO @ Mon, 10 Aug 2020 16:44:26: 42000000 INFO @ Mon, 10 Aug 2020 16:44:31: 44000000 INFO @ Mon, 10 Aug 2020 16:44:34: 43000000 INFO @ Mon, 10 Aug 2020 16:44:39: 45000000 INFO @ Mon, 10 Aug 2020 16:44:41: 44000000 INFO @ Mon, 10 Aug 2020 16:44:47: 46000000 INFO @ Mon, 10 Aug 2020 16:44:48: 45000000 INFO @ Mon, 10 Aug 2020 16:44:55: 47000000 INFO @ Mon, 10 Aug 2020 16:44:56: 46000000 INFO @ Mon, 10 Aug 2020 16:45:03: 48000000 INFO @ Mon, 10 Aug 2020 16:45:03: 47000000 INFO @ Mon, 10 Aug 2020 16:45:11: 49000000 INFO @ Mon, 10 Aug 2020 16:45:11: 48000000 BigWig に変換しました。 INFO @ Mon, 10 Aug 2020 16:45:14: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 16:45:14: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 16:45:14: #1 total tags in treatment: 49327213 INFO @ Mon, 10 Aug 2020 16:45:14: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 16:45:14: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 16:45:14: #1 tags after filtering in treatment: 49327160 INFO @ Mon, 10 Aug 2020 16:45:14: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 16:45:14: #1 finished! INFO @ Mon, 10 Aug 2020 16:45:14: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 16:45:14: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 16:45:18: 49000000 INFO @ Mon, 10 Aug 2020 16:45:20: #2 number of paired peaks: 44723 INFO @ Mon, 10 Aug 2020 16:45:20: start model_add_line... INFO @ Mon, 10 Aug 2020 16:45:20: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 16:45:20: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 16:45:20: #1 total tags in treatment: 49327213 INFO @ Mon, 10 Aug 2020 16:45:20: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 16:45:20: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 16:45:20: start X-correlation... INFO @ Mon, 10 Aug 2020 16:45:20: end of X-cor INFO @ Mon, 10 Aug 2020 16:45:20: #2 finished! INFO @ Mon, 10 Aug 2020 16:45:20: #2 predicted fragment length is 58 bps INFO @ Mon, 10 Aug 2020 16:45:20: #2 alternative fragment length(s) may be 58 bps INFO @ Mon, 10 Aug 2020 16:45:20: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.10_model.r WARNING @ Mon, 10 Aug 2020 16:45:21: #2 Since the d (58) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 16:45:21: #2 You may need to consider one of the other alternative d(s): 58 WARNING @ Mon, 10 Aug 2020 16:45:21: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 16:45:21: #3 Call peaks... INFO @ Mon, 10 Aug 2020 16:45:21: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 16:45:21: #1 tags after filtering in treatment: 49327160 INFO @ Mon, 10 Aug 2020 16:45:21: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 16:45:21: #1 finished! INFO @ Mon, 10 Aug 2020 16:45:21: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 16:45:21: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 16:45:27: #2 number of paired peaks: 44723 INFO @ Mon, 10 Aug 2020 16:45:27: start model_add_line... INFO @ Mon, 10 Aug 2020 16:45:27: start X-correlation... INFO @ Mon, 10 Aug 2020 16:45:27: end of X-cor INFO @ Mon, 10 Aug 2020 16:45:27: #2 finished! INFO @ Mon, 10 Aug 2020 16:45:27: #2 predicted fragment length is 58 bps INFO @ Mon, 10 Aug 2020 16:45:27: #2 alternative fragment length(s) may be 58 bps INFO @ Mon, 10 Aug 2020 16:45:27: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.20_model.r WARNING @ Mon, 10 Aug 2020 16:45:27: #2 Since the d (58) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 16:45:27: #2 You may need to consider one of the other alternative d(s): 58 WARNING @ Mon, 10 Aug 2020 16:45:27: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 16:45:27: #3 Call peaks... INFO @ Mon, 10 Aug 2020 16:45:27: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 16:46:06: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 16:47:02: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.05_peaks.xls INFO @ Mon, 10 Aug 2020 16:47:02: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.05_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 16:47:03: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.05_summits.bed INFO @ Mon, 10 Aug 2020 16:47:03: Done! pass1 - making usageList (229 chroms): 11 millis pass2 - checking and writing primary data (75990 records, 4 fields): 70 millis CompletedMACS2peakCalling INFO @ Mon, 10 Aug 2020 16:47:05: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 16:47:10: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 16:48:00: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.10_peaks.xls INFO @ Mon, 10 Aug 2020 16:48:00: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.10_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 16:48:00: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.10_summits.bed INFO @ Mon, 10 Aug 2020 16:48:00: Done! pass1 - making usageList (113 chroms): 3 millis pass2 - checking and writing primary data (22259 records, 4 fields): 23 millis CompletedMACS2peakCalling INFO @ Mon, 10 Aug 2020 16:48:04: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.20_peaks.xls INFO @ Mon, 10 Aug 2020 16:48:04: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.20_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 16:48:04: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047622/SRX8047622.20_summits.bed INFO @ Mon, 10 Aug 2020 16:48:04: Done! pass1 - making usageList (63 chroms): 1 millis pass2 - checking and writing primary data (4862 records, 4 fields): 8 millis CompletedMACS2peakCalling