Job ID = 8184298 SRX = SRX8047580 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-08-10T03:07:01 prefetch.2.10.7: 1) Downloading 'SRR11471305'... 2020-08-10T03:07:01 prefetch.2.10.7: Downloading via HTTPS... 2020-08-10T03:11:19 prefetch.2.10.7: HTTPS download succeed 2020-08-10T03:11:19 prefetch.2.10.7: 1) 'SRR11471305' was downloaded successfully Read 61678434 spots for SRR11471305/SRR11471305.sra Written 61678434 spots for SRR11471305/SRR11471305.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:01 Multiseed full-index search: 00:50:40 61678434 reads; of these: 61678434 (100.00%) were unpaired; of these: 3352315 (5.44%) aligned 0 times 42464743 (68.85%) aligned exactly 1 time 15861376 (25.72%) aligned >1 times 94.56% overall alignment rate Time searching: 00:50:43 Overall time: 00:50:43 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 24 files... [bam_rmdupse_core] 3491969 / 58326119 = 0.0599 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 13:20:29: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 13:20:29: #1 read tag files... INFO @ Mon, 10 Aug 2020 13:20:29: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 13:20:35: 1000000 INFO @ Mon, 10 Aug 2020 13:20:40: 2000000 INFO @ Mon, 10 Aug 2020 13:20:46: 3000000 INFO @ Mon, 10 Aug 2020 13:20:52: 4000000 INFO @ Mon, 10 Aug 2020 13:20:57: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 13:20:59: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 13:20:59: #1 read tag files... INFO @ Mon, 10 Aug 2020 13:20:59: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 13:21:02: 6000000 INFO @ Mon, 10 Aug 2020 13:21:04: 1000000 INFO @ Mon, 10 Aug 2020 13:21:07: 7000000 INFO @ Mon, 10 Aug 2020 13:21:09: 2000000 INFO @ Mon, 10 Aug 2020 13:21:12: 8000000 INFO @ Mon, 10 Aug 2020 13:21:15: 3000000 INFO @ Mon, 10 Aug 2020 13:21:18: 9000000 INFO @ Mon, 10 Aug 2020 13:21:20: 4000000 INFO @ Mon, 10 Aug 2020 13:21:24: 10000000 INFO @ Mon, 10 Aug 2020 13:21:25: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 13:21:29: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 13:21:29: #1 read tag files... INFO @ Mon, 10 Aug 2020 13:21:29: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 13:21:30: 11000000 INFO @ Mon, 10 Aug 2020 13:21:30: 6000000 INFO @ Mon, 10 Aug 2020 13:21:34: 1000000 INFO @ Mon, 10 Aug 2020 13:21:35: 12000000 INFO @ Mon, 10 Aug 2020 13:21:35: 7000000 INFO @ Mon, 10 Aug 2020 13:21:40: 2000000 INFO @ Mon, 10 Aug 2020 13:21:40: 13000000 INFO @ Mon, 10 Aug 2020 13:21:41: 8000000 INFO @ Mon, 10 Aug 2020 13:21:45: 3000000 INFO @ Mon, 10 Aug 2020 13:21:46: 9000000 INFO @ Mon, 10 Aug 2020 13:21:46: 14000000 INFO @ Mon, 10 Aug 2020 13:21:50: 4000000 INFO @ Mon, 10 Aug 2020 13:21:51: 10000000 INFO @ Mon, 10 Aug 2020 13:21:52: 15000000 INFO @ Mon, 10 Aug 2020 13:21:55: 5000000 INFO @ Mon, 10 Aug 2020 13:21:57: 11000000 INFO @ Mon, 10 Aug 2020 13:21:58: 16000000 INFO @ Mon, 10 Aug 2020 13:22:01: 6000000 INFO @ Mon, 10 Aug 2020 13:22:02: 12000000 INFO @ Mon, 10 Aug 2020 13:22:03: 17000000 INFO @ Mon, 10 Aug 2020 13:22:06: 7000000 INFO @ Mon, 10 Aug 2020 13:22:07: 13000000 INFO @ Mon, 10 Aug 2020 13:22:09: 18000000 INFO @ Mon, 10 Aug 2020 13:22:11: 8000000 INFO @ Mon, 10 Aug 2020 13:22:12: 14000000 INFO @ Mon, 10 Aug 2020 13:22:14: 19000000 INFO @ Mon, 10 Aug 2020 13:22:17: 9000000 INFO @ Mon, 10 Aug 2020 13:22:18: 15000000 INFO @ Mon, 10 Aug 2020 13:22:20: 20000000 INFO @ Mon, 10 Aug 2020 13:22:22: 10000000 INFO @ Mon, 10 Aug 2020 13:22:23: 16000000 INFO @ Mon, 10 Aug 2020 13:22:26: 21000000 INFO @ Mon, 10 Aug 2020 13:22:27: 11000000 INFO @ Mon, 10 Aug 2020 13:22:28: 17000000 INFO @ Mon, 10 Aug 2020 13:22:32: 22000000 INFO @ Mon, 10 Aug 2020 13:22:33: 12000000 INFO @ Mon, 10 Aug 2020 13:22:34: 18000000 INFO @ Mon, 10 Aug 2020 13:22:38: 23000000 INFO @ Mon, 10 Aug 2020 13:22:38: 13000000 INFO @ Mon, 10 Aug 2020 13:22:39: 19000000 INFO @ Mon, 10 Aug 2020 13:22:43: 14000000 INFO @ Mon, 10 Aug 2020 13:22:44: 24000000 INFO @ Mon, 10 Aug 2020 13:22:44: 20000000 INFO @ Mon, 10 Aug 2020 13:22:49: 15000000 INFO @ Mon, 10 Aug 2020 13:22:49: 21000000 INFO @ Mon, 10 Aug 2020 13:22:50: 25000000 INFO @ Mon, 10 Aug 2020 13:22:54: 16000000 INFO @ Mon, 10 Aug 2020 13:22:55: 22000000 INFO @ Mon, 10 Aug 2020 13:22:55: 26000000 INFO @ Mon, 10 Aug 2020 13:22:59: 17000000 INFO @ Mon, 10 Aug 2020 13:23:00: 23000000 INFO @ Mon, 10 Aug 2020 13:23:01: 27000000 INFO @ Mon, 10 Aug 2020 13:23:05: 18000000 INFO @ Mon, 10 Aug 2020 13:23:05: 24000000 INFO @ Mon, 10 Aug 2020 13:23:07: 28000000 INFO @ Mon, 10 Aug 2020 13:23:10: 19000000 INFO @ Mon, 10 Aug 2020 13:23:10: 25000000 INFO @ Mon, 10 Aug 2020 13:23:13: 29000000 INFO @ Mon, 10 Aug 2020 13:23:15: 20000000 INFO @ Mon, 10 Aug 2020 13:23:16: 26000000 INFO @ Mon, 10 Aug 2020 13:23:19: 30000000 INFO @ Mon, 10 Aug 2020 13:23:20: 21000000 INFO @ Mon, 10 Aug 2020 13:23:21: 27000000 INFO @ Mon, 10 Aug 2020 13:23:24: 31000000 INFO @ Mon, 10 Aug 2020 13:23:26: 22000000 INFO @ Mon, 10 Aug 2020 13:23:26: 28000000 INFO @ Mon, 10 Aug 2020 13:23:30: 32000000 INFO @ Mon, 10 Aug 2020 13:23:31: 23000000 INFO @ Mon, 10 Aug 2020 13:23:32: 29000000 INFO @ Mon, 10 Aug 2020 13:23:36: 33000000 INFO @ Mon, 10 Aug 2020 13:23:36: 24000000 INFO @ Mon, 10 Aug 2020 13:23:37: 30000000 INFO @ Mon, 10 Aug 2020 13:23:42: 25000000 INFO @ Mon, 10 Aug 2020 13:23:42: 34000000 INFO @ Mon, 10 Aug 2020 13:23:42: 31000000 INFO @ Mon, 10 Aug 2020 13:23:47: 26000000 INFO @ Mon, 10 Aug 2020 13:23:48: 32000000 INFO @ Mon, 10 Aug 2020 13:23:48: 35000000 INFO @ Mon, 10 Aug 2020 13:23:52: 27000000 INFO @ Mon, 10 Aug 2020 13:23:53: 33000000 INFO @ Mon, 10 Aug 2020 13:23:54: 36000000 INFO @ Mon, 10 Aug 2020 13:23:58: 28000000 INFO @ Mon, 10 Aug 2020 13:23:58: 34000000 INFO @ Mon, 10 Aug 2020 13:23:59: 37000000 INFO @ Mon, 10 Aug 2020 13:24:03: 29000000 INFO @ Mon, 10 Aug 2020 13:24:03: 35000000 INFO @ Mon, 10 Aug 2020 13:24:05: 38000000 INFO @ Mon, 10 Aug 2020 13:24:08: 30000000 INFO @ Mon, 10 Aug 2020 13:24:09: 36000000 INFO @ Mon, 10 Aug 2020 13:24:11: 39000000 INFO @ Mon, 10 Aug 2020 13:24:14: 31000000 INFO @ Mon, 10 Aug 2020 13:24:14: 37000000 INFO @ Mon, 10 Aug 2020 13:24:17: 40000000 INFO @ Mon, 10 Aug 2020 13:24:19: 32000000 INFO @ Mon, 10 Aug 2020 13:24:19: 38000000 INFO @ Mon, 10 Aug 2020 13:24:23: 41000000 INFO @ Mon, 10 Aug 2020 13:24:24: 33000000 INFO @ Mon, 10 Aug 2020 13:24:25: 39000000 INFO @ Mon, 10 Aug 2020 13:24:28: 42000000 INFO @ Mon, 10 Aug 2020 13:24:30: 34000000 INFO @ Mon, 10 Aug 2020 13:24:30: 40000000 INFO @ Mon, 10 Aug 2020 13:24:34: 43000000 INFO @ Mon, 10 Aug 2020 13:24:35: 35000000 INFO @ Mon, 10 Aug 2020 13:24:35: 41000000 INFO @ Mon, 10 Aug 2020 13:24:40: 44000000 INFO @ Mon, 10 Aug 2020 13:24:40: 36000000 INFO @ Mon, 10 Aug 2020 13:24:40: 42000000 INFO @ Mon, 10 Aug 2020 13:24:45: 37000000 INFO @ Mon, 10 Aug 2020 13:24:46: 43000000 INFO @ Mon, 10 Aug 2020 13:24:46: 45000000 INFO @ Mon, 10 Aug 2020 13:24:51: 38000000 INFO @ Mon, 10 Aug 2020 13:24:51: 44000000 INFO @ Mon, 10 Aug 2020 13:24:51: 46000000 INFO @ Mon, 10 Aug 2020 13:24:56: 39000000 INFO @ Mon, 10 Aug 2020 13:24:56: 45000000 INFO @ Mon, 10 Aug 2020 13:24:57: 47000000 INFO @ Mon, 10 Aug 2020 13:25:01: 40000000 INFO @ Mon, 10 Aug 2020 13:25:01: 46000000 INFO @ Mon, 10 Aug 2020 13:25:03: 48000000 INFO @ Mon, 10 Aug 2020 13:25:07: 41000000 INFO @ Mon, 10 Aug 2020 13:25:07: 47000000 INFO @ Mon, 10 Aug 2020 13:25:09: 49000000 INFO @ Mon, 10 Aug 2020 13:25:12: 42000000 INFO @ Mon, 10 Aug 2020 13:25:12: 48000000 INFO @ Mon, 10 Aug 2020 13:25:15: 50000000 INFO @ Mon, 10 Aug 2020 13:25:17: 43000000 INFO @ Mon, 10 Aug 2020 13:25:17: 49000000 INFO @ Mon, 10 Aug 2020 13:25:20: 51000000 INFO @ Mon, 10 Aug 2020 13:25:22: 44000000 INFO @ Mon, 10 Aug 2020 13:25:22: 50000000 INFO @ Mon, 10 Aug 2020 13:25:26: 52000000 INFO @ Mon, 10 Aug 2020 13:25:28: 45000000 INFO @ Mon, 10 Aug 2020 13:25:28: 51000000 INFO @ Mon, 10 Aug 2020 13:25:32: 53000000 INFO @ Mon, 10 Aug 2020 13:25:33: 46000000 INFO @ Mon, 10 Aug 2020 13:25:33: 52000000 INFO @ Mon, 10 Aug 2020 13:25:38: 54000000 INFO @ Mon, 10 Aug 2020 13:25:38: 47000000 INFO @ Mon, 10 Aug 2020 13:25:38: 53000000 INFO @ Mon, 10 Aug 2020 13:25:43: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 13:25:43: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 13:25:43: #1 total tags in treatment: 54834150 INFO @ Mon, 10 Aug 2020 13:25:43: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 13:25:43: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 13:25:43: 48000000 INFO @ Mon, 10 Aug 2020 13:25:44: 54000000 INFO @ Mon, 10 Aug 2020 13:25:44: #1 tags after filtering in treatment: 54834090 INFO @ Mon, 10 Aug 2020 13:25:44: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 13:25:44: #1 finished! INFO @ Mon, 10 Aug 2020 13:25:44: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 13:25:44: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 13:25:48: #2 number of paired peaks: 5344 INFO @ Mon, 10 Aug 2020 13:25:48: start model_add_line... INFO @ Mon, 10 Aug 2020 13:25:48: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 13:25:48: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 13:25:48: #1 total tags in treatment: 54834150 INFO @ Mon, 10 Aug 2020 13:25:48: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 13:25:48: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 13:25:49: 49000000 INFO @ Mon, 10 Aug 2020 13:25:49: start X-correlation... INFO @ Mon, 10 Aug 2020 13:25:49: end of X-cor INFO @ Mon, 10 Aug 2020 13:25:49: #2 finished! INFO @ Mon, 10 Aug 2020 13:25:49: #2 predicted fragment length is 55 bps INFO @ Mon, 10 Aug 2020 13:25:49: #2 alternative fragment length(s) may be 55 bps INFO @ Mon, 10 Aug 2020 13:25:49: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.05_model.r WARNING @ Mon, 10 Aug 2020 13:25:49: #2 Since the d (55) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 13:25:49: #2 You may need to consider one of the other alternative d(s): 55 WARNING @ Mon, 10 Aug 2020 13:25:49: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 13:25:49: #3 Call peaks... INFO @ Mon, 10 Aug 2020 13:25:49: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 13:25:49: #1 tags after filtering in treatment: 54834090 INFO @ Mon, 10 Aug 2020 13:25:49: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 13:25:49: #1 finished! INFO @ Mon, 10 Aug 2020 13:25:49: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 13:25:49: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 13:25:54: 50000000 INFO @ Mon, 10 Aug 2020 13:25:54: #2 number of paired peaks: 5344 INFO @ Mon, 10 Aug 2020 13:25:54: start model_add_line... INFO @ Mon, 10 Aug 2020 13:25:54: start X-correlation... INFO @ Mon, 10 Aug 2020 13:25:54: end of X-cor INFO @ Mon, 10 Aug 2020 13:25:54: #2 finished! INFO @ Mon, 10 Aug 2020 13:25:54: #2 predicted fragment length is 55 bps INFO @ Mon, 10 Aug 2020 13:25:54: #2 alternative fragment length(s) may be 55 bps INFO @ Mon, 10 Aug 2020 13:25:54: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.10_model.r WARNING @ Mon, 10 Aug 2020 13:25:54: #2 Since the d (55) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 13:25:54: #2 You may need to consider one of the other alternative d(s): 55 WARNING @ Mon, 10 Aug 2020 13:25:54: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 13:25:54: #3 Call peaks... INFO @ Mon, 10 Aug 2020 13:25:54: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 13:25:59: 51000000 INFO @ Mon, 10 Aug 2020 13:26:04: 52000000 INFO @ Mon, 10 Aug 2020 13:26:09: 53000000 INFO @ Mon, 10 Aug 2020 13:26:14: 54000000 INFO @ Mon, 10 Aug 2020 13:26:19: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 13:26:19: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 13:26:19: #1 total tags in treatment: 54834150 INFO @ Mon, 10 Aug 2020 13:26:19: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 13:26:19: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 13:26:20: #1 tags after filtering in treatment: 54834090 INFO @ Mon, 10 Aug 2020 13:26:20: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 13:26:20: #1 finished! INFO @ Mon, 10 Aug 2020 13:26:20: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 13:26:20: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 13:26:24: #2 number of paired peaks: 5344 INFO @ Mon, 10 Aug 2020 13:26:24: start model_add_line... INFO @ Mon, 10 Aug 2020 13:26:25: start X-correlation... INFO @ Mon, 10 Aug 2020 13:26:25: end of X-cor INFO @ Mon, 10 Aug 2020 13:26:25: #2 finished! INFO @ Mon, 10 Aug 2020 13:26:25: #2 predicted fragment length is 55 bps INFO @ Mon, 10 Aug 2020 13:26:25: #2 alternative fragment length(s) may be 55 bps INFO @ Mon, 10 Aug 2020 13:26:25: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.20_model.r WARNING @ Mon, 10 Aug 2020 13:26:25: #2 Since the d (55) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 13:26:25: #2 You may need to consider one of the other alternative d(s): 55 WARNING @ Mon, 10 Aug 2020 13:26:25: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 13:26:25: #3 Call peaks... INFO @ Mon, 10 Aug 2020 13:26:25: #3 Pre-compute pvalue-qvalue table... BedGraph に変換しました。 BigWig に変換中... INFO @ Mon, 10 Aug 2020 13:27:46: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 13:27:57: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 13:28:22: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 13:28:48: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.05_peaks.xls INFO @ Mon, 10 Aug 2020 13:28:48: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.05_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 13:28:48: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.05_summits.bed INFO @ Mon, 10 Aug 2020 13:28:48: Done! pass1 - making usageList (77 chroms): 2 millis pass2 - checking and writing primary data (4734 records, 4 fields): 9 millis CompletedMACS2peakCalling BigWig に変換しました。 INFO @ Mon, 10 Aug 2020 13:28:58: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.10_peaks.xls INFO @ Mon, 10 Aug 2020 13:28:58: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.10_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 13:28:58: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.10_summits.bed INFO @ Mon, 10 Aug 2020 13:28:58: Done! pass1 - making usageList (54 chroms): 1 millis pass2 - checking and writing primary data (2040 records, 4 fields): 11 millis CompletedMACS2peakCalling INFO @ Mon, 10 Aug 2020 13:29:23: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.20_peaks.xls INFO @ Mon, 10 Aug 2020 13:29:23: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.20_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 13:29:23: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047580/SRX8047580.20_summits.bed INFO @ Mon, 10 Aug 2020 13:29:23: Done! pass1 - making usageList (42 chroms): 1 millis pass2 - checking and writing primary data (772 records, 4 fields): 3 millis CompletedMACS2peakCalling