Job ID = 8184227 SRX = SRX8047574 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-08-10T02:56:00 prefetch.2.10.7: 1) Downloading 'SRR11471299'... 2020-08-10T02:56:00 prefetch.2.10.7: Downloading via HTTPS... 2020-08-10T02:59:05 prefetch.2.10.7: HTTPS download succeed 2020-08-10T02:59:05 prefetch.2.10.7: 1) 'SRR11471299' was downloaded successfully Read 64607008 spots for SRR11471299/SRR11471299.sra Written 64607008 spots for SRR11471299/SRR11471299.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:02 Time loading mirror index: 00:00:01 Multiseed full-index search: 00:46:21 64607008 reads; of these: 64607008 (100.00%) were unpaired; of these: 2686760 (4.16%) aligned 0 times 47159386 (72.99%) aligned exactly 1 time 14760862 (22.85%) aligned >1 times 95.84% overall alignment rate Time searching: 00:46:24 Overall time: 00:46:24 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 28 files... [bam_rmdupse_core] 7651185 / 61920248 = 0.1236 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 13:04:17: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 13:04:17: #1 read tag files... INFO @ Mon, 10 Aug 2020 13:04:17: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 13:04:22: 1000000 INFO @ Mon, 10 Aug 2020 13:04:27: 2000000 INFO @ Mon, 10 Aug 2020 13:04:32: 3000000 INFO @ Mon, 10 Aug 2020 13:04:37: 4000000 INFO @ Mon, 10 Aug 2020 13:04:42: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 13:04:47: 6000000 INFO @ Mon, 10 Aug 2020 13:04:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 13:04:47: #1 read tag files... INFO @ Mon, 10 Aug 2020 13:04:47: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 13:04:51: 7000000 INFO @ Mon, 10 Aug 2020 13:04:52: 1000000 INFO @ Mon, 10 Aug 2020 13:04:56: 8000000 INFO @ Mon, 10 Aug 2020 13:04:57: 2000000 INFO @ Mon, 10 Aug 2020 13:05:02: 3000000 INFO @ Mon, 10 Aug 2020 13:05:02: 9000000 INFO @ Mon, 10 Aug 2020 13:05:06: 4000000 INFO @ Mon, 10 Aug 2020 13:05:08: 10000000 INFO @ Mon, 10 Aug 2020 13:05:11: 5000000 INFO @ Mon, 10 Aug 2020 13:05:13: 11000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 13:05:16: 6000000 INFO @ Mon, 10 Aug 2020 13:05:17: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 13:05:17: #1 read tag files... INFO @ Mon, 10 Aug 2020 13:05:17: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 13:05:19: 12000000 INFO @ Mon, 10 Aug 2020 13:05:21: 7000000 INFO @ Mon, 10 Aug 2020 13:05:23: 1000000 INFO @ Mon, 10 Aug 2020 13:05:24: 13000000 INFO @ Mon, 10 Aug 2020 13:05:26: 8000000 INFO @ Mon, 10 Aug 2020 13:05:28: 2000000 INFO @ Mon, 10 Aug 2020 13:05:28: 14000000 INFO @ Mon, 10 Aug 2020 13:05:31: 9000000 INFO @ Mon, 10 Aug 2020 13:05:33: 15000000 INFO @ Mon, 10 Aug 2020 13:05:34: 3000000 INFO @ Mon, 10 Aug 2020 13:05:35: 10000000 INFO @ Mon, 10 Aug 2020 13:05:38: 16000000 INFO @ Mon, 10 Aug 2020 13:05:39: 4000000 INFO @ Mon, 10 Aug 2020 13:05:40: 11000000 INFO @ Mon, 10 Aug 2020 13:05:43: 17000000 INFO @ Mon, 10 Aug 2020 13:05:44: 5000000 INFO @ Mon, 10 Aug 2020 13:05:45: 12000000 INFO @ Mon, 10 Aug 2020 13:05:48: 18000000 INFO @ Mon, 10 Aug 2020 13:05:50: 6000000 INFO @ Mon, 10 Aug 2020 13:05:50: 13000000 INFO @ Mon, 10 Aug 2020 13:05:53: 19000000 INFO @ Mon, 10 Aug 2020 13:05:55: 14000000 INFO @ Mon, 10 Aug 2020 13:05:55: 7000000 INFO @ Mon, 10 Aug 2020 13:05:58: 20000000 INFO @ Mon, 10 Aug 2020 13:06:00: 15000000 INFO @ Mon, 10 Aug 2020 13:06:01: 8000000 INFO @ Mon, 10 Aug 2020 13:06:02: 21000000 INFO @ Mon, 10 Aug 2020 13:06:05: 16000000 INFO @ Mon, 10 Aug 2020 13:06:06: 9000000 INFO @ Mon, 10 Aug 2020 13:06:07: 22000000 INFO @ Mon, 10 Aug 2020 13:06:09: 17000000 INFO @ Mon, 10 Aug 2020 13:06:12: 10000000 INFO @ Mon, 10 Aug 2020 13:06:12: 23000000 INFO @ Mon, 10 Aug 2020 13:06:14: 18000000 INFO @ Mon, 10 Aug 2020 13:06:17: 24000000 INFO @ Mon, 10 Aug 2020 13:06:17: 11000000 INFO @ Mon, 10 Aug 2020 13:06:19: 19000000 INFO @ Mon, 10 Aug 2020 13:06:22: 25000000 INFO @ Mon, 10 Aug 2020 13:06:23: 12000000 INFO @ Mon, 10 Aug 2020 13:06:24: 20000000 INFO @ Mon, 10 Aug 2020 13:06:27: 26000000 INFO @ Mon, 10 Aug 2020 13:06:28: 13000000 INFO @ Mon, 10 Aug 2020 13:06:29: 21000000 INFO @ Mon, 10 Aug 2020 13:06:31: 27000000 INFO @ Mon, 10 Aug 2020 13:06:33: 14000000 INFO @ Mon, 10 Aug 2020 13:06:34: 22000000 INFO @ Mon, 10 Aug 2020 13:06:36: 28000000 INFO @ Mon, 10 Aug 2020 13:06:38: 23000000 INFO @ Mon, 10 Aug 2020 13:06:39: 15000000 INFO @ Mon, 10 Aug 2020 13:06:41: 29000000 INFO @ Mon, 10 Aug 2020 13:06:43: 24000000 INFO @ Mon, 10 Aug 2020 13:06:44: 16000000 INFO @ Mon, 10 Aug 2020 13:06:46: 30000000 INFO @ Mon, 10 Aug 2020 13:06:48: 25000000 INFO @ Mon, 10 Aug 2020 13:06:50: 17000000 INFO @ Mon, 10 Aug 2020 13:06:51: 31000000 INFO @ Mon, 10 Aug 2020 13:06:53: 26000000 INFO @ Mon, 10 Aug 2020 13:06:55: 18000000 INFO @ Mon, 10 Aug 2020 13:06:56: 32000000 INFO @ Mon, 10 Aug 2020 13:06:58: 27000000 INFO @ Mon, 10 Aug 2020 13:07:00: 19000000 INFO @ Mon, 10 Aug 2020 13:07:01: 33000000 INFO @ Mon, 10 Aug 2020 13:07:03: 28000000 INFO @ Mon, 10 Aug 2020 13:07:05: 34000000 INFO @ Mon, 10 Aug 2020 13:07:06: 20000000 INFO @ Mon, 10 Aug 2020 13:07:07: 29000000 INFO @ Mon, 10 Aug 2020 13:07:10: 35000000 INFO @ Mon, 10 Aug 2020 13:07:11: 21000000 INFO @ Mon, 10 Aug 2020 13:07:12: 30000000 INFO @ Mon, 10 Aug 2020 13:07:15: 36000000 INFO @ Mon, 10 Aug 2020 13:07:17: 22000000 INFO @ Mon, 10 Aug 2020 13:07:17: 31000000 INFO @ Mon, 10 Aug 2020 13:07:20: 37000000 INFO @ Mon, 10 Aug 2020 13:07:22: 32000000 INFO @ Mon, 10 Aug 2020 13:07:22: 23000000 INFO @ Mon, 10 Aug 2020 13:07:25: 38000000 INFO @ Mon, 10 Aug 2020 13:07:27: 33000000 INFO @ Mon, 10 Aug 2020 13:07:28: 24000000 INFO @ Mon, 10 Aug 2020 13:07:30: 39000000 INFO @ Mon, 10 Aug 2020 13:07:32: 34000000 INFO @ Mon, 10 Aug 2020 13:07:34: 25000000 INFO @ Mon, 10 Aug 2020 13:07:35: 40000000 INFO @ Mon, 10 Aug 2020 13:07:37: 35000000 INFO @ Mon, 10 Aug 2020 13:07:39: 26000000 INFO @ Mon, 10 Aug 2020 13:07:40: 41000000 INFO @ Mon, 10 Aug 2020 13:07:41: 36000000 INFO @ Mon, 10 Aug 2020 13:07:45: 42000000 INFO @ Mon, 10 Aug 2020 13:07:45: 27000000 INFO @ Mon, 10 Aug 2020 13:07:46: 37000000 INFO @ Mon, 10 Aug 2020 13:07:50: 43000000 INFO @ Mon, 10 Aug 2020 13:07:51: 28000000 INFO @ Mon, 10 Aug 2020 13:07:51: 38000000 INFO @ Mon, 10 Aug 2020 13:07:55: 44000000 INFO @ Mon, 10 Aug 2020 13:07:56: 39000000 INFO @ Mon, 10 Aug 2020 13:07:56: 29000000 INFO @ Mon, 10 Aug 2020 13:07:59: 45000000 INFO @ Mon, 10 Aug 2020 13:08:01: 40000000 INFO @ Mon, 10 Aug 2020 13:08:02: 30000000 INFO @ Mon, 10 Aug 2020 13:08:05: 46000000 INFO @ Mon, 10 Aug 2020 13:08:06: 41000000 INFO @ Mon, 10 Aug 2020 13:08:08: 31000000 INFO @ Mon, 10 Aug 2020 13:08:10: 47000000 INFO @ Mon, 10 Aug 2020 13:08:11: 42000000 INFO @ Mon, 10 Aug 2020 13:08:13: 32000000 INFO @ Mon, 10 Aug 2020 13:08:15: 48000000 INFO @ Mon, 10 Aug 2020 13:08:15: 43000000 INFO @ Mon, 10 Aug 2020 13:08:19: 33000000 INFO @ Mon, 10 Aug 2020 13:08:20: 49000000 INFO @ Mon, 10 Aug 2020 13:08:20: 44000000 INFO @ Mon, 10 Aug 2020 13:08:25: 50000000 INFO @ Mon, 10 Aug 2020 13:08:25: 34000000 INFO @ Mon, 10 Aug 2020 13:08:25: 45000000 INFO @ Mon, 10 Aug 2020 13:08:29: 51000000 INFO @ Mon, 10 Aug 2020 13:08:30: 46000000 INFO @ Mon, 10 Aug 2020 13:08:30: 35000000 INFO @ Mon, 10 Aug 2020 13:08:34: 52000000 INFO @ Mon, 10 Aug 2020 13:08:35: 47000000 INFO @ Mon, 10 Aug 2020 13:08:36: 36000000 INFO @ Mon, 10 Aug 2020 13:08:39: 53000000 INFO @ Mon, 10 Aug 2020 13:08:40: 48000000 INFO @ Mon, 10 Aug 2020 13:08:41: 37000000 INFO @ Mon, 10 Aug 2020 13:08:44: 54000000 INFO @ Mon, 10 Aug 2020 13:08:45: 49000000 INFO @ Mon, 10 Aug 2020 13:08:46: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 13:08:46: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 13:08:46: #1 total tags in treatment: 54269063 INFO @ Mon, 10 Aug 2020 13:08:46: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 13:08:46: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 13:08:47: #1 tags after filtering in treatment: 54268988 INFO @ Mon, 10 Aug 2020 13:08:47: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 13:08:47: #1 finished! INFO @ Mon, 10 Aug 2020 13:08:47: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 13:08:47: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 13:08:47: 38000000 INFO @ Mon, 10 Aug 2020 13:08:50: 50000000 INFO @ Mon, 10 Aug 2020 13:08:52: #2 number of paired peaks: 23695 INFO @ Mon, 10 Aug 2020 13:08:52: start model_add_line... INFO @ Mon, 10 Aug 2020 13:08:52: start X-correlation... INFO @ Mon, 10 Aug 2020 13:08:52: end of X-cor INFO @ Mon, 10 Aug 2020 13:08:52: #2 finished! INFO @ Mon, 10 Aug 2020 13:08:52: #2 predicted fragment length is 118 bps INFO @ Mon, 10 Aug 2020 13:08:52: #2 alternative fragment length(s) may be 118 bps INFO @ Mon, 10 Aug 2020 13:08:52: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.05_model.r INFO @ Mon, 10 Aug 2020 13:08:52: #3 Call peaks... INFO @ Mon, 10 Aug 2020 13:08:52: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 13:08:53: 39000000 INFO @ Mon, 10 Aug 2020 13:08:54: 51000000 INFO @ Mon, 10 Aug 2020 13:08:58: 40000000 INFO @ Mon, 10 Aug 2020 13:08:59: 52000000 INFO @ Mon, 10 Aug 2020 13:09:04: 41000000 INFO @ Mon, 10 Aug 2020 13:09:04: 53000000 INFO @ Mon, 10 Aug 2020 13:09:09: 54000000 INFO @ Mon, 10 Aug 2020 13:09:10: 42000000 INFO @ Mon, 10 Aug 2020 13:09:11: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 13:09:11: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 13:09:11: #1 total tags in treatment: 54269063 INFO @ Mon, 10 Aug 2020 13:09:11: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 13:09:11: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 13:09:12: #1 tags after filtering in treatment: 54268988 INFO @ Mon, 10 Aug 2020 13:09:12: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 13:09:12: #1 finished! INFO @ Mon, 10 Aug 2020 13:09:12: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 13:09:12: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 13:09:15: 43000000 INFO @ Mon, 10 Aug 2020 13:09:17: #2 number of paired peaks: 23695 INFO @ Mon, 10 Aug 2020 13:09:17: start model_add_line... INFO @ Mon, 10 Aug 2020 13:09:17: start X-correlation... INFO @ Mon, 10 Aug 2020 13:09:17: end of X-cor INFO @ Mon, 10 Aug 2020 13:09:17: #2 finished! INFO @ Mon, 10 Aug 2020 13:09:17: #2 predicted fragment length is 118 bps INFO @ Mon, 10 Aug 2020 13:09:17: #2 alternative fragment length(s) may be 118 bps INFO @ Mon, 10 Aug 2020 13:09:17: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.10_model.r INFO @ Mon, 10 Aug 2020 13:09:17: #3 Call peaks... INFO @ Mon, 10 Aug 2020 13:09:17: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 13:09:20: 44000000 INFO @ Mon, 10 Aug 2020 13:09:26: 45000000 INFO @ Mon, 10 Aug 2020 13:09:31: 46000000 INFO @ Mon, 10 Aug 2020 13:09:36: 47000000 INFO @ Mon, 10 Aug 2020 13:09:42: 48000000 INFO @ Mon, 10 Aug 2020 13:09:47: 49000000 INFO @ Mon, 10 Aug 2020 13:09:52: 50000000 INFO @ Mon, 10 Aug 2020 13:09:58: 51000000 INFO @ Mon, 10 Aug 2020 13:10:03: 52000000 INFO @ Mon, 10 Aug 2020 13:10:09: 53000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Mon, 10 Aug 2020 13:10:14: 54000000 INFO @ Mon, 10 Aug 2020 13:10:16: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 13:10:16: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 13:10:16: #1 total tags in treatment: 54269063 INFO @ Mon, 10 Aug 2020 13:10:16: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 13:10:16: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 13:10:17: #1 tags after filtering in treatment: 54268988 INFO @ Mon, 10 Aug 2020 13:10:17: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 13:10:17: #1 finished! INFO @ Mon, 10 Aug 2020 13:10:17: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 13:10:17: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 13:10:22: #2 number of paired peaks: 23695 INFO @ Mon, 10 Aug 2020 13:10:22: start model_add_line... INFO @ Mon, 10 Aug 2020 13:10:22: start X-correlation... INFO @ Mon, 10 Aug 2020 13:10:22: end of X-cor INFO @ Mon, 10 Aug 2020 13:10:22: #2 finished! INFO @ Mon, 10 Aug 2020 13:10:22: #2 predicted fragment length is 118 bps INFO @ Mon, 10 Aug 2020 13:10:22: #2 alternative fragment length(s) may be 118 bps INFO @ Mon, 10 Aug 2020 13:10:22: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.20_model.r INFO @ Mon, 10 Aug 2020 13:10:22: #3 Call peaks... INFO @ Mon, 10 Aug 2020 13:10:22: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 13:10:49: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 13:11:17: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 13:11:55: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.05_peaks.xls INFO @ Mon, 10 Aug 2020 13:11:55: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.05_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 13:11:55: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.05_summits.bed INFO @ Mon, 10 Aug 2020 13:11:55: Done! pass1 - making usageList (108 chroms): 3 millis pass2 - checking and writing primary data (21991 records, 4 fields): 23 millis CompletedMACS2peakCalling BigWig に変換しました。 INFO @ Mon, 10 Aug 2020 13:12:24: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 13:12:25: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.10_peaks.xls INFO @ Mon, 10 Aug 2020 13:12:25: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.10_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 13:12:25: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.10_summits.bed INFO @ Mon, 10 Aug 2020 13:12:25: Done! pass1 - making usageList (83 chroms): 2 millis pass2 - checking and writing primary data (13111 records, 4 fields): 15 millis CompletedMACS2peakCalling INFO @ Mon, 10 Aug 2020 13:13:28: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.20_peaks.xls INFO @ Mon, 10 Aug 2020 13:13:28: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.20_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 13:13:28: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047574/SRX8047574.20_summits.bed INFO @ Mon, 10 Aug 2020 13:13:28: Done! pass1 - making usageList (53 chroms): 1 millis pass2 - checking and writing primary data (6215 records, 4 fields): 7 millis CompletedMACS2peakCalling