Job ID = 2640467 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - mbedtls_ssl_handshake returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - ktls_handshake failed while accessing '130.14.250.24' from '172.19.7.55' 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - Failed to create TLS stream for 'sra-download.ncbi.nlm.nih.gov' (130.14.250.24) from '172.19.7.55' 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: connection failed while opening file within cryptographic module - error with https open 'https://sra-download.ncbi.nlm.nih.gov/traces/sra77/SRR/008373/SRR8574040' 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_db().VDBManagerOpenDBRead( 'SRR8574040' ) -> RC(rcKrypto,rcFile,rcOpening,rcConnection,rcFailed) 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcKrypto,rcFile,rcOpening,rcConnection,rcFailed) 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - mbedtls_ssl_handshake returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - ktls_handshake failed while accessing '130.14.250.24' from '172.19.7.55' 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - Failed to create TLS stream for 'sra-download.ncbi.nlm.nih.gov' (130.14.250.24) from '172.19.7.55' 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: connection failed while opening file within cryptographic module - error with https open 'https://sra-download.ncbi.nlm.nih.gov/traces/sra77/SRR/008373/SRR8574040' 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_db().VDBManagerOpenDBRead( 'SRR8574040' ) -> RC(rcKrypto,rcFile,rcOpening,rcConnection,rcFailed) 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcKrypto,rcFile,rcOpening,rcConnection,rcFailed) 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - mbedtls_ssl_handshake returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - ktls_handshake failed while accessing '130.14.250.24' from '172.19.7.55' 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - Failed to create TLS stream for 'sra-download.ncbi.nlm.nih.gov' (130.14.250.24) from '172.19.7.55' 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: connection failed while opening file within cryptographic module - error with https open 'https://sra-download.ncbi.nlm.nih.gov/traces/sra77/SRR/008373/SRR8574040' 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_db().VDBManagerOpenDBRead( 'SRR8574040' ) -> RC(rcKrypto,rcFile,rcOpening,rcConnection,rcFailed) 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcKrypto,rcFile,rcOpening,rcConnection,rcFailed) 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - mbedtls_ssl_handshake returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - mbedtls_ssl_handshake returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - ktls_handshake failed while accessing '130.14.250.24' from '172.19.7.55' 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - ktls_handshake failed while accessing '130.14.250.24' from '172.19.7.55' 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - Failed to create TLS stream for 'sra-download.ncbi.nlm.nih.gov' (130.14.250.24) from '172.19.7.55' 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - Failed to create TLS stream for 'sra-download.ncbi.nlm.nih.gov' (130.14.250.24) from '172.19.7.55' 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: connection failed while opening file within cryptographic module - error with https open 'https://sra-download.ncbi.nlm.nih.gov/traces/sra77/SRR/008373/SRR8574040' 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: connection failed while opening file within cryptographic module - error with https open 'https://sra-download.ncbi.nlm.nih.gov/traces/sra77/SRR/008373/SRR8574040' 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_db().VDBManagerOpenDBRead( 'SRR8574040' ) -> RC(rcKrypto,rcFile,rcOpening,rcConnection,rcFailed) 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_db().VDBManagerOpenDBRead( 'SRR8574040' ) -> RC(rcKrypto,rcFile,rcOpening,rcConnection,rcFailed) 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcKrypto,rcFile,rcOpening,rcConnection,rcFailed) 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcKrypto,rcFile,rcOpening,rcConnection,rcFailed) 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - mbedtls_ssl_handshake returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - ktls_handshake failed while accessing '130.14.250.24' from '172.19.7.55' 2019-08-24T08:04:54 fasterq-dump.2.9.6 sys: connection failed while opening file within cryptographic module - Failed to create TLS stream for 'sra-download.ncbi.nlm.nih.gov' (130.14.250.24) from '172.19.7.55' 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: connection failed while opening file within cryptographic module - error with https open 'https://sra-download.ncbi.nlm.nih.gov/traces/sra77/SRR/008373/SRR8574040' 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_db().VDBManagerOpenDBRead( 'SRR8574040' ) -> RC(rcKrypto,rcFile,rcOpening,rcConnection,rcFailed) 2019-08-24T08:04:54 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcKrypto,rcFile,rcOpening,rcConnection,rcFailed) 2019-08-24T08:06:57 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:07:34 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:07:34 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:07:34 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:07:34 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:07:34 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:08:21 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:08:21 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:08:21 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:08:21 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T08:12:31 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 16,018,186 reads read : 32,036,372 reads written : 16,018,186 reads 0-length : 16,018,186 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:01 Multiseed full-index search: 00:11:30 16018186 reads; of these: 16018186 (100.00%) were unpaired; of these: 728100 (4.55%) aligned 0 times 11297444 (70.53%) aligned exactly 1 time 3992642 (24.93%) aligned >1 times 95.45% overall alignment rate Time searching: 00:11:33 Overall time: 00:11:33 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 8 files... [bam_rmdupse_core] 654675 / 15290086 = 0.0428 in library ' ' BAM に変換しました。 Bed ファイルを作成中... INFO @ Sat, 24 Aug 2019 17:29:38: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 17:29:38: #1 read tag files... INFO @ Sat, 24 Aug 2019 17:29:38: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 17:29:48: 1000000 INFO @ Sat, 24 Aug 2019 17:29:58: 2000000 INFO @ Sat, 24 Aug 2019 17:30:08: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 17:30:08: #1 read tag files... INFO @ Sat, 24 Aug 2019 17:30:08: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 17:30:08: 3000000 INFO @ Sat, 24 Aug 2019 17:30:19: 4000000 INFO @ Sat, 24 Aug 2019 17:30:19: 1000000 INFO @ Sat, 24 Aug 2019 17:30:30: 5000000 INFO @ Sat, 24 Aug 2019 17:30:30: 2000000 BedGraph に変換中... INFO @ Sat, 24 Aug 2019 17:30:38: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 17:30:38: #1 read tag files... INFO @ Sat, 24 Aug 2019 17:30:38: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 17:30:42: 6000000 INFO @ Sat, 24 Aug 2019 17:30:42: 3000000 INFO @ Sat, 24 Aug 2019 17:30:53: 7000000 INFO @ Sat, 24 Aug 2019 17:30:54: 1000000 INFO @ Sat, 24 Aug 2019 17:30:55: 4000000 INFO @ Sat, 24 Aug 2019 17:31:06: 8000000 INFO @ Sat, 24 Aug 2019 17:31:08: 2000000 INFO @ Sat, 24 Aug 2019 17:31:09: 5000000 INFO @ Sat, 24 Aug 2019 17:31:17: 9000000 INFO @ Sat, 24 Aug 2019 17:31:22: 3000000 INFO @ Sat, 24 Aug 2019 17:31:23: 6000000 INFO @ Sat, 24 Aug 2019 17:31:29: 10000000 INFO @ Sat, 24 Aug 2019 17:31:36: 4000000 INFO @ Sat, 24 Aug 2019 17:31:36: 7000000 INFO @ Sat, 24 Aug 2019 17:31:41: 11000000 INFO @ Sat, 24 Aug 2019 17:31:50: 5000000 INFO @ Sat, 24 Aug 2019 17:31:50: 8000000 INFO @ Sat, 24 Aug 2019 17:31:53: 12000000 INFO @ Sat, 24 Aug 2019 17:32:03: 6000000 INFO @ Sat, 24 Aug 2019 17:32:03: 9000000 INFO @ Sat, 24 Aug 2019 17:32:05: 13000000 INFO @ Sat, 24 Aug 2019 17:32:16: 7000000 INFO @ Sat, 24 Aug 2019 17:32:17: 10000000 INFO @ Sat, 24 Aug 2019 17:32:17: 14000000 INFO @ Sat, 24 Aug 2019 17:32:25: #1 tag size is determined as 51 bps INFO @ Sat, 24 Aug 2019 17:32:25: #1 tag size = 51 INFO @ Sat, 24 Aug 2019 17:32:25: #1 total tags in treatment: 14635411 INFO @ Sat, 24 Aug 2019 17:32:25: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 17:32:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 17:32:26: #1 tags after filtering in treatment: 14635244 INFO @ Sat, 24 Aug 2019 17:32:26: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 24 Aug 2019 17:32:26: #1 finished! INFO @ Sat, 24 Aug 2019 17:32:26: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 17:32:26: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 17:32:27: 8000000 INFO @ Sat, 24 Aug 2019 17:32:28: #2 number of paired peaks: 12168 INFO @ Sat, 24 Aug 2019 17:32:28: start model_add_line... INFO @ Sat, 24 Aug 2019 17:32:28: start X-correlation... INFO @ Sat, 24 Aug 2019 17:32:28: end of X-cor INFO @ Sat, 24 Aug 2019 17:32:28: #2 finished! INFO @ Sat, 24 Aug 2019 17:32:28: #2 predicted fragment length is 153 bps INFO @ Sat, 24 Aug 2019 17:32:28: #2 alternative fragment length(s) may be 153 bps INFO @ Sat, 24 Aug 2019 17:32:28: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.05_model.r INFO @ Sat, 24 Aug 2019 17:32:28: #3 Call peaks... INFO @ Sat, 24 Aug 2019 17:32:28: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 24 Aug 2019 17:32:30: 11000000 INFO @ Sat, 24 Aug 2019 17:32:38: 9000000 INFO @ Sat, 24 Aug 2019 17:32:41: 12000000 INFO @ Sat, 24 Aug 2019 17:32:49: 10000000 INFO @ Sat, 24 Aug 2019 17:32:52: 13000000 INFO @ Sat, 24 Aug 2019 17:33:00: 11000000 INFO @ Sat, 24 Aug 2019 17:33:02: 14000000 INFO @ Sat, 24 Aug 2019 17:33:09: #1 tag size is determined as 51 bps INFO @ Sat, 24 Aug 2019 17:33:09: #1 tag size = 51 INFO @ Sat, 24 Aug 2019 17:33:09: #1 total tags in treatment: 14635411 INFO @ Sat, 24 Aug 2019 17:33:09: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 17:33:09: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 17:33:10: #1 tags after filtering in treatment: 14635244 INFO @ Sat, 24 Aug 2019 17:33:10: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 24 Aug 2019 17:33:10: #1 finished! INFO @ Sat, 24 Aug 2019 17:33:10: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 17:33:10: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 17:33:11: 12000000 INFO @ Sat, 24 Aug 2019 17:33:12: #2 number of paired peaks: 12168 INFO @ Sat, 24 Aug 2019 17:33:12: start model_add_line... INFO @ Sat, 24 Aug 2019 17:33:12: start X-correlation... INFO @ Sat, 24 Aug 2019 17:33:12: end of X-cor INFO @ Sat, 24 Aug 2019 17:33:12: #2 finished! INFO @ Sat, 24 Aug 2019 17:33:12: #2 predicted fragment length is 153 bps INFO @ Sat, 24 Aug 2019 17:33:12: #2 alternative fragment length(s) may be 153 bps INFO @ Sat, 24 Aug 2019 17:33:12: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.10_model.r INFO @ Sat, 24 Aug 2019 17:33:12: #3 Call peaks... INFO @ Sat, 24 Aug 2019 17:33:12: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 24 Aug 2019 17:33:15: #3 Call peaks for each chromosome... INFO @ Sat, 24 Aug 2019 17:33:20: 13000000 INFO @ Sat, 24 Aug 2019 17:33:30: 14000000 INFO @ Sat, 24 Aug 2019 17:33:36: #1 tag size is determined as 51 bps INFO @ Sat, 24 Aug 2019 17:33:36: #1 tag size = 51 INFO @ Sat, 24 Aug 2019 17:33:36: #1 total tags in treatment: 14635411 INFO @ Sat, 24 Aug 2019 17:33:36: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 17:33:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 17:33:37: #1 tags after filtering in treatment: 14635244 INFO @ Sat, 24 Aug 2019 17:33:37: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 24 Aug 2019 17:33:37: #1 finished! INFO @ Sat, 24 Aug 2019 17:33:37: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 17:33:37: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 17:33:39: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.05_peaks.xls INFO @ Sat, 24 Aug 2019 17:33:39: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.05_peaks.narrowPeak INFO @ Sat, 24 Aug 2019 17:33:39: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.05_summits.bed INFO @ Sat, 24 Aug 2019 17:33:39: Done! INFO @ Sat, 24 Aug 2019 17:33:39: #2 number of paired peaks: 12168 INFO @ Sat, 24 Aug 2019 17:33:39: start model_add_line... pass1 - making usageList (51 chroms): 3 millis pass2 - checking and writing primary data (3563 records, 4 fields): 11 millis CompletedMACS2peakCalling INFO @ Sat, 24 Aug 2019 17:33:39: start X-correlation... INFO @ Sat, 24 Aug 2019 17:33:39: end of X-cor INFO @ Sat, 24 Aug 2019 17:33:39: #2 finished! INFO @ Sat, 24 Aug 2019 17:33:39: #2 predicted fragment length is 153 bps INFO @ Sat, 24 Aug 2019 17:33:39: #2 alternative fragment length(s) may be 153 bps INFO @ Sat, 24 Aug 2019 17:33:39: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.20_model.r INFO @ Sat, 24 Aug 2019 17:33:39: #3 Call peaks... INFO @ Sat, 24 Aug 2019 17:33:39: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 24 Aug 2019 17:33:59: #3 Call peaks for each chromosome... INFO @ Sat, 24 Aug 2019 17:34:22: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.10_peaks.xls INFO @ Sat, 24 Aug 2019 17:34:22: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.10_peaks.narrowPeak INFO @ Sat, 24 Aug 2019 17:34:22: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.10_summits.bed INFO @ Sat, 24 Aug 2019 17:34:23: Done! pass1 - making usageList (37 chroms): 2 millis pass2 - checking and writing primary data (1880 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Sat, 24 Aug 2019 17:34:26: #3 Call peaks for each chromosome... BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 24 Aug 2019 17:34:49: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.20_peaks.xls INFO @ Sat, 24 Aug 2019 17:34:49: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.20_peaks.narrowPeak INFO @ Sat, 24 Aug 2019 17:34:49: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX5374985/SRX5374985.20_summits.bed INFO @ Sat, 24 Aug 2019 17:34:49: Done! pass1 - making usageList (29 chroms): 1 millis pass2 - checking and writing primary data (832 records, 4 fields): 6 millis CompletedMACS2peakCalling BigWig に変換しました。