Job ID = 11632724 sra ファイルのダウンロード中... Completed: 1036958K bytes transferred in 14 seconds (601466K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: SINGLE fastq に変換中... Read 70921520 spots for /home/okishinya/chipatlas/results/rn6/SRX3782483/SRR6826301.sra Written 70921520 spots for /home/okishinya/chipatlas/results/rn6/SRX3782483/SRR6826301.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:02 Time loading mirror index: 00:00:01 Multiseed full-index search: 00:30:30 70921520 reads; of these: 70921520 (100.00%) were unpaired; of these: 4216578 (5.95%) aligned 0 times 50164009 (70.73%) aligned exactly 1 time 16540933 (23.32%) aligned >1 times 94.05% overall alignment rate Time searching: 00:30:34 Overall time: 00:30:34 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 20 files... [bam_rmdupse_core] 2790150 / 66704942 = 0.0418 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 15 Feb 2019 07:32:11: # Command line: callpeak -t SRX3782483.bam -f BAM -g 2.15e9 -n SRX3782483.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX3782483.05 # format = BAM # ChIP-seq file = ['SRX3782483.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 15 Feb 2019 07:32:11: #1 read tag files... INFO @ Fri, 15 Feb 2019 07:32:11: #1 read treatment tags... INFO @ Fri, 15 Feb 2019 07:32:11: # Command line: callpeak -t SRX3782483.bam -f BAM -g 2.15e9 -n SRX3782483.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX3782483.10 # format = BAM # ChIP-seq file = ['SRX3782483.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 15 Feb 2019 07:32:11: #1 read tag files... INFO @ Fri, 15 Feb 2019 07:32:11: #1 read treatment tags... INFO @ Fri, 15 Feb 2019 07:32:11: # Command line: callpeak -t SRX3782483.bam -f BAM -g 2.15e9 -n SRX3782483.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX3782483.20 # format = BAM # ChIP-seq file = ['SRX3782483.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 15 Feb 2019 07:32:11: #1 read tag files... INFO @ Fri, 15 Feb 2019 07:32:11: #1 read treatment tags... INFO @ Fri, 15 Feb 2019 07:32:18: 1000000 INFO @ Fri, 15 Feb 2019 07:32:18: 1000000 INFO @ Fri, 15 Feb 2019 07:32:18: 1000000 INFO @ Fri, 15 Feb 2019 07:32:24: 2000000 INFO @ Fri, 15 Feb 2019 07:32:24: 2000000 INFO @ Fri, 15 Feb 2019 07:32:24: 2000000 INFO @ Fri, 15 Feb 2019 07:32:30: 3000000 INFO @ Fri, 15 Feb 2019 07:32:31: 3000000 INFO @ Fri, 15 Feb 2019 07:32:31: 3000000 INFO @ Fri, 15 Feb 2019 07:32:36: 4000000 INFO @ Fri, 15 Feb 2019 07:32:37: 4000000 INFO @ Fri, 15 Feb 2019 07:32:37: 4000000 INFO @ Fri, 15 Feb 2019 07:32:42: 5000000 INFO @ Fri, 15 Feb 2019 07:32:43: 5000000 INFO @ Fri, 15 Feb 2019 07:32:43: 5000000 INFO @ Fri, 15 Feb 2019 07:32:48: 6000000 INFO @ Fri, 15 Feb 2019 07:32:49: 6000000 INFO @ Fri, 15 Feb 2019 07:32:50: 6000000 INFO @ Fri, 15 Feb 2019 07:32:54: 7000000 INFO @ Fri, 15 Feb 2019 07:32:56: 7000000 INFO @ Fri, 15 Feb 2019 07:32:56: 7000000 INFO @ Fri, 15 Feb 2019 07:33:01: 8000000 INFO @ Fri, 15 Feb 2019 07:33:02: 8000000 INFO @ Fri, 15 Feb 2019 07:33:02: 8000000 INFO @ Fri, 15 Feb 2019 07:33:07: 9000000 INFO @ Fri, 15 Feb 2019 07:33:08: 9000000 INFO @ Fri, 15 Feb 2019 07:33:08: 9000000 INFO @ Fri, 15 Feb 2019 07:33:13: 10000000 INFO @ Fri, 15 Feb 2019 07:33:15: 10000000 INFO @ Fri, 15 Feb 2019 07:33:15: 10000000 INFO @ Fri, 15 Feb 2019 07:33:19: 11000000 INFO @ Fri, 15 Feb 2019 07:33:21: 11000000 INFO @ Fri, 15 Feb 2019 07:33:21: 11000000 INFO @ Fri, 15 Feb 2019 07:33:25: 12000000 INFO @ Fri, 15 Feb 2019 07:33:27: 12000000 INFO @ Fri, 15 Feb 2019 07:33:28: 12000000 INFO @ Fri, 15 Feb 2019 07:33:32: 13000000 INFO @ Fri, 15 Feb 2019 07:33:34: 13000000 INFO @ Fri, 15 Feb 2019 07:33:34: 13000000 INFO @ Fri, 15 Feb 2019 07:33:38: 14000000 INFO @ Fri, 15 Feb 2019 07:33:40: 14000000 INFO @ Fri, 15 Feb 2019 07:33:40: 14000000 INFO @ Fri, 15 Feb 2019 07:33:44: 15000000 INFO @ Fri, 15 Feb 2019 07:33:47: 15000000 INFO @ Fri, 15 Feb 2019 07:33:47: 15000000 INFO @ Fri, 15 Feb 2019 07:33:50: 16000000 INFO @ Fri, 15 Feb 2019 07:33:53: 16000000 INFO @ Fri, 15 Feb 2019 07:33:53: 16000000 INFO @ Fri, 15 Feb 2019 07:33:56: 17000000 INFO @ Fri, 15 Feb 2019 07:33:59: 17000000 INFO @ Fri, 15 Feb 2019 07:34:00: 17000000 INFO @ Fri, 15 Feb 2019 07:34:02: 18000000 INFO @ Fri, 15 Feb 2019 07:34:06: 18000000 INFO @ Fri, 15 Feb 2019 07:34:06: 18000000 INFO @ Fri, 15 Feb 2019 07:34:09: 19000000 INFO @ Fri, 15 Feb 2019 07:34:12: 19000000 INFO @ Fri, 15 Feb 2019 07:34:13: 19000000 INFO @ Fri, 15 Feb 2019 07:34:15: 20000000 INFO @ Fri, 15 Feb 2019 07:34:19: 20000000 INFO @ Fri, 15 Feb 2019 07:34:19: 20000000 INFO @ Fri, 15 Feb 2019 07:34:21: 21000000 INFO @ Fri, 15 Feb 2019 07:34:25: 21000000 INFO @ Fri, 15 Feb 2019 07:34:26: 21000000 INFO @ Fri, 15 Feb 2019 07:34:27: 22000000 INFO @ Fri, 15 Feb 2019 07:34:32: 22000000 INFO @ Fri, 15 Feb 2019 07:34:32: 22000000 INFO @ Fri, 15 Feb 2019 07:34:33: 23000000 INFO @ Fri, 15 Feb 2019 07:34:38: 23000000 INFO @ Fri, 15 Feb 2019 07:34:39: 23000000 INFO @ Fri, 15 Feb 2019 07:34:40: 24000000 INFO @ Fri, 15 Feb 2019 07:34:45: 24000000 INFO @ Fri, 15 Feb 2019 07:34:45: 24000000 INFO @ Fri, 15 Feb 2019 07:34:46: 25000000 INFO @ Fri, 15 Feb 2019 07:34:51: 25000000 INFO @ Fri, 15 Feb 2019 07:34:52: 25000000 INFO @ Fri, 15 Feb 2019 07:34:52: 26000000 INFO @ Fri, 15 Feb 2019 07:34:58: 26000000 INFO @ Fri, 15 Feb 2019 07:34:58: 27000000 INFO @ Fri, 15 Feb 2019 07:34:59: 26000000 INFO @ Fri, 15 Feb 2019 07:35:04: 27000000 INFO @ Fri, 15 Feb 2019 07:35:04: 28000000 INFO @ Fri, 15 Feb 2019 07:35:05: 27000000 INFO @ Fri, 15 Feb 2019 07:35:11: 29000000 INFO @ Fri, 15 Feb 2019 07:35:11: 28000000 INFO @ Fri, 15 Feb 2019 07:35:12: 28000000 INFO @ Fri, 15 Feb 2019 07:35:17: 30000000 INFO @ Fri, 15 Feb 2019 07:35:17: 29000000 INFO @ Fri, 15 Feb 2019 07:35:18: 29000000 INFO @ Fri, 15 Feb 2019 07:35:23: 31000000 INFO @ Fri, 15 Feb 2019 07:35:24: 30000000 INFO @ Fri, 15 Feb 2019 07:35:25: 30000000 INFO @ Fri, 15 Feb 2019 07:35:29: 32000000 INFO @ Fri, 15 Feb 2019 07:35:30: 31000000 INFO @ Fri, 15 Feb 2019 07:35:31: 31000000 INFO @ Fri, 15 Feb 2019 07:35:35: 33000000 INFO @ Fri, 15 Feb 2019 07:35:37: 32000000 INFO @ Fri, 15 Feb 2019 07:35:38: 32000000 INFO @ Fri, 15 Feb 2019 07:35:41: 34000000 INFO @ Fri, 15 Feb 2019 07:35:43: 33000000 INFO @ Fri, 15 Feb 2019 07:35:45: 33000000 INFO @ Fri, 15 Feb 2019 07:35:47: 35000000 INFO @ Fri, 15 Feb 2019 07:35:50: 34000000 INFO @ Fri, 15 Feb 2019 07:35:51: 34000000 INFO @ Fri, 15 Feb 2019 07:35:53: 36000000 INFO @ Fri, 15 Feb 2019 07:35:56: 35000000 INFO @ Fri, 15 Feb 2019 07:35:58: 35000000 INFO @ Fri, 15 Feb 2019 07:36:00: 37000000 INFO @ Fri, 15 Feb 2019 07:36:03: 36000000 INFO @ Fri, 15 Feb 2019 07:36:04: 36000000 INFO @ Fri, 15 Feb 2019 07:36:06: 38000000 INFO @ Fri, 15 Feb 2019 07:36:09: 37000000 INFO @ Fri, 15 Feb 2019 07:36:11: 37000000 INFO @ Fri, 15 Feb 2019 07:36:12: 39000000 INFO @ Fri, 15 Feb 2019 07:36:16: 38000000 INFO @ Fri, 15 Feb 2019 07:36:17: 38000000 INFO @ Fri, 15 Feb 2019 07:36:18: 40000000 INFO @ Fri, 15 Feb 2019 07:36:22: 39000000 INFO @ Fri, 15 Feb 2019 07:36:24: 41000000 INFO @ Fri, 15 Feb 2019 07:36:24: 39000000 INFO @ Fri, 15 Feb 2019 07:36:29: 40000000 INFO @ Fri, 15 Feb 2019 07:36:30: 42000000 INFO @ Fri, 15 Feb 2019 07:36:30: 40000000 INFO @ Fri, 15 Feb 2019 07:36:35: 41000000 INFO @ Fri, 15 Feb 2019 07:36:36: 43000000 INFO @ Fri, 15 Feb 2019 07:36:37: 41000000 INFO @ Fri, 15 Feb 2019 07:36:42: 42000000 INFO @ Fri, 15 Feb 2019 07:36:42: 44000000 INFO @ Fri, 15 Feb 2019 07:36:44: 42000000 INFO @ Fri, 15 Feb 2019 07:36:48: 43000000 INFO @ Fri, 15 Feb 2019 07:36:48: 45000000 INFO @ Fri, 15 Feb 2019 07:36:50: 43000000 INFO @ Fri, 15 Feb 2019 07:36:55: 46000000 INFO @ Fri, 15 Feb 2019 07:36:55: 44000000 INFO @ Fri, 15 Feb 2019 07:36:57: 44000000 INFO @ Fri, 15 Feb 2019 07:37:01: 47000000 INFO @ Fri, 15 Feb 2019 07:37:01: 45000000 INFO @ Fri, 15 Feb 2019 07:37:04: 45000000 INFO @ Fri, 15 Feb 2019 07:37:07: 48000000 INFO @ Fri, 15 Feb 2019 07:37:07: 46000000 INFO @ Fri, 15 Feb 2019 07:37:10: 46000000 INFO @ Fri, 15 Feb 2019 07:37:13: 49000000 INFO @ Fri, 15 Feb 2019 07:37:14: 47000000 INFO @ Fri, 15 Feb 2019 07:37:17: 47000000 INFO @ Fri, 15 Feb 2019 07:37:19: 50000000 INFO @ Fri, 15 Feb 2019 07:37:20: 48000000 INFO @ Fri, 15 Feb 2019 07:37:24: 48000000 INFO @ Fri, 15 Feb 2019 07:37:25: 51000000 INFO @ Fri, 15 Feb 2019 07:37:27: 49000000 INFO @ Fri, 15 Feb 2019 07:37:30: 49000000 INFO @ Fri, 15 Feb 2019 07:37:32: 52000000 INFO @ Fri, 15 Feb 2019 07:37:33: 50000000 INFO @ Fri, 15 Feb 2019 07:37:37: 50000000 INFO @ Fri, 15 Feb 2019 07:37:38: 53000000 INFO @ Fri, 15 Feb 2019 07:37:40: 51000000 INFO @ Fri, 15 Feb 2019 07:37:44: 51000000 INFO @ Fri, 15 Feb 2019 07:37:44: 54000000 INFO @ Fri, 15 Feb 2019 07:37:46: 52000000 INFO @ Fri, 15 Feb 2019 07:37:50: 55000000 INFO @ Fri, 15 Feb 2019 07:37:51: 52000000 INFO @ Fri, 15 Feb 2019 07:37:53: 53000000 INFO @ Fri, 15 Feb 2019 07:37:56: 56000000 INFO @ Fri, 15 Feb 2019 07:37:57: 53000000 INFO @ Fri, 15 Feb 2019 07:37:59: 54000000 INFO @ Fri, 15 Feb 2019 07:38:03: 57000000 INFO @ Fri, 15 Feb 2019 07:38:04: 54000000 INFO @ Fri, 15 Feb 2019 07:38:06: 55000000 INFO @ Fri, 15 Feb 2019 07:38:09: 58000000 INFO @ Fri, 15 Feb 2019 07:38:11: 55000000 INFO @ Fri, 15 Feb 2019 07:38:12: 56000000 INFO @ Fri, 15 Feb 2019 07:38:15: 59000000 INFO @ Fri, 15 Feb 2019 07:38:17: 56000000 INFO @ Fri, 15 Feb 2019 07:38:19: 57000000 INFO @ Fri, 15 Feb 2019 07:38:21: 60000000 INFO @ Fri, 15 Feb 2019 07:38:24: 57000000 INFO @ Fri, 15 Feb 2019 07:38:26: 58000000 INFO @ Fri, 15 Feb 2019 07:38:28: 61000000 INFO @ Fri, 15 Feb 2019 07:38:31: 58000000 INFO @ Fri, 15 Feb 2019 07:38:32: 59000000 INFO @ Fri, 15 Feb 2019 07:38:34: 62000000 INFO @ Fri, 15 Feb 2019 07:38:38: 59000000 INFO @ Fri, 15 Feb 2019 07:38:39: 60000000 INFO @ Fri, 15 Feb 2019 07:38:40: 63000000 INFO @ Fri, 15 Feb 2019 07:38:44: 60000000 INFO @ Fri, 15 Feb 2019 07:38:45: 61000000 INFO @ Fri, 15 Feb 2019 07:38:47: #1 tag size is determined as 40 bps INFO @ Fri, 15 Feb 2019 07:38:47: #1 tag size = 40 INFO @ Fri, 15 Feb 2019 07:38:47: #1 total tags in treatment: 63914792 INFO @ Fri, 15 Feb 2019 07:38:47: #1 user defined the maximum tags... INFO @ Fri, 15 Feb 2019 07:38:47: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 15 Feb 2019 07:38:48: #1 tags after filtering in treatment: 63914738 INFO @ Fri, 15 Feb 2019 07:38:48: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 15 Feb 2019 07:38:48: #1 finished! INFO @ Fri, 15 Feb 2019 07:38:48: #2 Build Peak Model... INFO @ Fri, 15 Feb 2019 07:38:48: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 15 Feb 2019 07:38:51: 61000000 INFO @ Fri, 15 Feb 2019 07:38:52: 62000000 INFO @ Fri, 15 Feb 2019 07:38:54: #2 number of paired peaks: 3444 INFO @ Fri, 15 Feb 2019 07:38:54: start model_add_line... INFO @ Fri, 15 Feb 2019 07:38:55: start X-correlation... INFO @ Fri, 15 Feb 2019 07:38:55: end of X-cor INFO @ Fri, 15 Feb 2019 07:38:55: #2 finished! INFO @ Fri, 15 Feb 2019 07:38:55: #2 predicted fragment length is 39 bps INFO @ Fri, 15 Feb 2019 07:38:55: #2 alternative fragment length(s) may be 39,578 bps INFO @ Fri, 15 Feb 2019 07:38:55: #2.2 Generate R script for model : SRX3782483.20_model.r WARNING @ Fri, 15 Feb 2019 07:38:55: #2 Since the d (39) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 15 Feb 2019 07:38:55: #2 You may need to consider one of the other alternative d(s): 39,578 WARNING @ Fri, 15 Feb 2019 07:38:55: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 15 Feb 2019 07:38:55: #3 Call peaks... INFO @ Fri, 15 Feb 2019 07:38:55: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 15 Feb 2019 07:38:58: 62000000 INFO @ Fri, 15 Feb 2019 07:38:58: 63000000 INFO @ Fri, 15 Feb 2019 07:39:04: 63000000 INFO @ Fri, 15 Feb 2019 07:39:05: #1 tag size is determined as 40 bps INFO @ Fri, 15 Feb 2019 07:39:05: #1 tag size = 40 INFO @ Fri, 15 Feb 2019 07:39:05: #1 total tags in treatment: 63914792 INFO @ Fri, 15 Feb 2019 07:39:05: #1 user defined the maximum tags... INFO @ Fri, 15 Feb 2019 07:39:05: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 15 Feb 2019 07:39:06: #1 tags after filtering in treatment: 63914738 INFO @ Fri, 15 Feb 2019 07:39:06: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 15 Feb 2019 07:39:06: #1 finished! INFO @ Fri, 15 Feb 2019 07:39:06: #2 Build Peak Model... INFO @ Fri, 15 Feb 2019 07:39:06: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 15 Feb 2019 07:39:11: #1 tag size is determined as 40 bps INFO @ Fri, 15 Feb 2019 07:39:11: #1 tag size = 40 INFO @ Fri, 15 Feb 2019 07:39:11: #1 total tags in treatment: 63914792 INFO @ Fri, 15 Feb 2019 07:39:11: #1 user defined the maximum tags... INFO @ Fri, 15 Feb 2019 07:39:11: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 15 Feb 2019 07:39:12: #2 number of paired peaks: 3444 INFO @ Fri, 15 Feb 2019 07:39:12: start model_add_line... INFO @ Fri, 15 Feb 2019 07:39:12: #1 tags after filtering in treatment: 63914738 INFO @ Fri, 15 Feb 2019 07:39:12: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 15 Feb 2019 07:39:12: #1 finished! INFO @ Fri, 15 Feb 2019 07:39:12: #2 Build Peak Model... INFO @ Fri, 15 Feb 2019 07:39:12: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 15 Feb 2019 07:39:13: start X-correlation... INFO @ Fri, 15 Feb 2019 07:39:13: end of X-cor INFO @ Fri, 15 Feb 2019 07:39:13: #2 finished! INFO @ Fri, 15 Feb 2019 07:39:13: #2 predicted fragment length is 39 bps INFO @ Fri, 15 Feb 2019 07:39:13: #2 alternative fragment length(s) may be 39,578 bps INFO @ Fri, 15 Feb 2019 07:39:13: #2.2 Generate R script for model : SRX3782483.10_model.r WARNING @ Fri, 15 Feb 2019 07:39:13: #2 Since the d (39) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 15 Feb 2019 07:39:13: #2 You may need to consider one of the other alternative d(s): 39,578 WARNING @ Fri, 15 Feb 2019 07:39:13: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 15 Feb 2019 07:39:13: #3 Call peaks... INFO @ Fri, 15 Feb 2019 07:39:13: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 15 Feb 2019 07:39:18: #2 number of paired peaks: 3444 INFO @ Fri, 15 Feb 2019 07:39:18: start model_add_line... INFO @ Fri, 15 Feb 2019 07:39:19: start X-correlation... INFO @ Fri, 15 Feb 2019 07:39:19: end of X-cor INFO @ Fri, 15 Feb 2019 07:39:19: #2 finished! INFO @ Fri, 15 Feb 2019 07:39:19: #2 predicted fragment length is 39 bps INFO @ Fri, 15 Feb 2019 07:39:19: #2 alternative fragment length(s) may be 39,578 bps INFO @ Fri, 15 Feb 2019 07:39:19: #2.2 Generate R script for model : SRX3782483.05_model.r WARNING @ Fri, 15 Feb 2019 07:39:19: #2 Since the d (39) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 15 Feb 2019 07:39:19: #2 You may need to consider one of the other alternative d(s): 39,578 WARNING @ Fri, 15 Feb 2019 07:39:19: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 15 Feb 2019 07:39:19: #3 Call peaks... INFO @ Fri, 15 Feb 2019 07:39:19: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 15 Feb 2019 07:41:26: #3 Call peaks for each chromosome... INFO @ Fri, 15 Feb 2019 07:41:38: #3 Call peaks for each chromosome... INFO @ Fri, 15 Feb 2019 07:41:44: #3 Call peaks for each chromosome... INFO @ Fri, 15 Feb 2019 07:42:46: #4 Write output xls file... SRX3782483.20_peaks.xls INFO @ Fri, 15 Feb 2019 07:42:46: #4 Write peak in narrowPeak format file... SRX3782483.20_peaks.narrowPeak INFO @ Fri, 15 Feb 2019 07:42:46: #4 Write summits bed file... SRX3782483.20_summits.bed INFO @ Fri, 15 Feb 2019 07:42:46: Done! pass1 - making usageList (34 chroms): 8 millis pass2 - checking and writing primary data (632 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Fri, 15 Feb 2019 07:43:04: #4 Write output xls file... SRX3782483.10_peaks.xls INFO @ Fri, 15 Feb 2019 07:43:04: #4 Write peak in narrowPeak format file... SRX3782483.10_peaks.narrowPeak INFO @ Fri, 15 Feb 2019 07:43:04: #4 Write summits bed file... SRX3782483.10_summits.bed INFO @ Fri, 15 Feb 2019 07:43:04: Done! pass1 - making usageList (41 chroms): 7 millis pass2 - checking and writing primary data (1422 records, 4 fields): 9 millis CompletedMACS2peakCalling INFO @ Fri, 15 Feb 2019 07:43:14: #4 Write output xls file... SRX3782483.05_peaks.xls INFO @ Fri, 15 Feb 2019 07:43:14: #4 Write peak in narrowPeak format file... SRX3782483.05_peaks.narrowPeak INFO @ Fri, 15 Feb 2019 07:43:14: #4 Write summits bed file... SRX3782483.05_summits.bed INFO @ Fri, 15 Feb 2019 07:43:15: Done! pass1 - making usageList (56 chroms): 5 millis pass2 - checking and writing primary data (2627 records, 4 fields): 10 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。