Job ID = 11632701 sra ファイルのダウンロード中... Completed: 1036958K bytes transferred in 12 seconds (686404K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: SINGLE fastq に変換中... Read 70921520 spots for /home/okishinya/chipatlas/results/rn6/SRX3782460/SRR6826278.sra Written 70921520 spots for /home/okishinya/chipatlas/results/rn6/SRX3782460/SRR6826278.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:02 Time loading mirror index: 00:00:01 Multiseed full-index search: 00:31:03 70921520 reads; of these: 70921520 (100.00%) were unpaired; of these: 4216909 (5.95%) aligned 0 times 50163427 (70.73%) aligned exactly 1 time 16541184 (23.32%) aligned >1 times 94.05% overall alignment rate Time searching: 00:31:07 Overall time: 00:31:07 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 20 files... [bam_rmdupse_core] 2790993 / 66704611 = 0.0418 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 15 Feb 2019 06:53:25: # Command line: callpeak -t SRX3782460.bam -f BAM -g 2.15e9 -n SRX3782460.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX3782460.20 # format = BAM # ChIP-seq file = ['SRX3782460.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 15 Feb 2019 06:53:25: #1 read tag files... INFO @ Fri, 15 Feb 2019 06:53:25: #1 read treatment tags... INFO @ Fri, 15 Feb 2019 06:53:25: # Command line: callpeak -t SRX3782460.bam -f BAM -g 2.15e9 -n SRX3782460.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX3782460.10 # format = BAM # ChIP-seq file = ['SRX3782460.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 15 Feb 2019 06:53:25: #1 read tag files... INFO @ Fri, 15 Feb 2019 06:53:25: #1 read treatment tags... INFO @ Fri, 15 Feb 2019 06:53:25: # Command line: callpeak -t SRX3782460.bam -f BAM -g 2.15e9 -n SRX3782460.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX3782460.05 # format = BAM # ChIP-seq file = ['SRX3782460.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 15 Feb 2019 06:53:25: #1 read tag files... INFO @ Fri, 15 Feb 2019 06:53:25: #1 read treatment tags... INFO @ Fri, 15 Feb 2019 06:53:32: 1000000 INFO @ Fri, 15 Feb 2019 06:53:32: 1000000 INFO @ Fri, 15 Feb 2019 06:53:32: 1000000 INFO @ Fri, 15 Feb 2019 06:53:38: 2000000 INFO @ Fri, 15 Feb 2019 06:53:38: 2000000 INFO @ Fri, 15 Feb 2019 06:53:39: 2000000 INFO @ Fri, 15 Feb 2019 06:53:45: 3000000 INFO @ Fri, 15 Feb 2019 06:53:45: 3000000 INFO @ Fri, 15 Feb 2019 06:53:46: 3000000 INFO @ Fri, 15 Feb 2019 06:53:51: 4000000 INFO @ Fri, 15 Feb 2019 06:53:52: 4000000 INFO @ Fri, 15 Feb 2019 06:53:52: 4000000 INFO @ Fri, 15 Feb 2019 06:53:58: 5000000 INFO @ Fri, 15 Feb 2019 06:53:58: 5000000 INFO @ Fri, 15 Feb 2019 06:53:59: 5000000 INFO @ Fri, 15 Feb 2019 06:54:04: 6000000 INFO @ Fri, 15 Feb 2019 06:54:05: 6000000 INFO @ Fri, 15 Feb 2019 06:54:07: 6000000 INFO @ Fri, 15 Feb 2019 06:54:10: 7000000 INFO @ Fri, 15 Feb 2019 06:54:12: 7000000 INFO @ Fri, 15 Feb 2019 06:54:14: 7000000 INFO @ Fri, 15 Feb 2019 06:54:17: 8000000 INFO @ Fri, 15 Feb 2019 06:54:19: 8000000 INFO @ Fri, 15 Feb 2019 06:54:21: 8000000 INFO @ Fri, 15 Feb 2019 06:54:23: 9000000 INFO @ Fri, 15 Feb 2019 06:54:26: 9000000 INFO @ Fri, 15 Feb 2019 06:54:28: 9000000 INFO @ Fri, 15 Feb 2019 06:54:30: 10000000 INFO @ Fri, 15 Feb 2019 06:54:32: 10000000 INFO @ Fri, 15 Feb 2019 06:54:35: 10000000 INFO @ Fri, 15 Feb 2019 06:54:36: 11000000 INFO @ Fri, 15 Feb 2019 06:54:39: 11000000 INFO @ Fri, 15 Feb 2019 06:54:42: 11000000 INFO @ Fri, 15 Feb 2019 06:54:42: 12000000 INFO @ Fri, 15 Feb 2019 06:54:46: 12000000 INFO @ Fri, 15 Feb 2019 06:54:49: 13000000 INFO @ Fri, 15 Feb 2019 06:54:49: 12000000 INFO @ Fri, 15 Feb 2019 06:54:53: 13000000 INFO @ Fri, 15 Feb 2019 06:54:55: 14000000 INFO @ Fri, 15 Feb 2019 06:54:56: 13000000 INFO @ Fri, 15 Feb 2019 06:55:00: 14000000 INFO @ Fri, 15 Feb 2019 06:55:02: 15000000 INFO @ Fri, 15 Feb 2019 06:55:03: 14000000 INFO @ Fri, 15 Feb 2019 06:55:07: 15000000 INFO @ Fri, 15 Feb 2019 06:55:08: 16000000 INFO @ Fri, 15 Feb 2019 06:55:11: 15000000 INFO @ Fri, 15 Feb 2019 06:55:13: 16000000 INFO @ Fri, 15 Feb 2019 06:55:14: 17000000 INFO @ Fri, 15 Feb 2019 06:55:18: 16000000 INFO @ Fri, 15 Feb 2019 06:55:20: 17000000 INFO @ Fri, 15 Feb 2019 06:55:21: 18000000 INFO @ Fri, 15 Feb 2019 06:55:25: 17000000 INFO @ Fri, 15 Feb 2019 06:55:27: 18000000 INFO @ Fri, 15 Feb 2019 06:55:27: 19000000 INFO @ Fri, 15 Feb 2019 06:55:32: 18000000 INFO @ Fri, 15 Feb 2019 06:55:34: 20000000 INFO @ Fri, 15 Feb 2019 06:55:34: 19000000 INFO @ Fri, 15 Feb 2019 06:55:39: 19000000 INFO @ Fri, 15 Feb 2019 06:55:40: 21000000 INFO @ Fri, 15 Feb 2019 06:55:41: 20000000 INFO @ Fri, 15 Feb 2019 06:55:46: 20000000 INFO @ Fri, 15 Feb 2019 06:55:46: 22000000 INFO @ Fri, 15 Feb 2019 06:55:48: 21000000 INFO @ Fri, 15 Feb 2019 06:55:53: 23000000 INFO @ Fri, 15 Feb 2019 06:55:53: 21000000 INFO @ Fri, 15 Feb 2019 06:55:54: 22000000 INFO @ Fri, 15 Feb 2019 06:55:59: 24000000 INFO @ Fri, 15 Feb 2019 06:56:00: 22000000 INFO @ Fri, 15 Feb 2019 06:56:01: 23000000 INFO @ Fri, 15 Feb 2019 06:56:06: 25000000 INFO @ Fri, 15 Feb 2019 06:56:08: 23000000 INFO @ Fri, 15 Feb 2019 06:56:08: 24000000 INFO @ Fri, 15 Feb 2019 06:56:12: 26000000 INFO @ Fri, 15 Feb 2019 06:56:15: 24000000 INFO @ Fri, 15 Feb 2019 06:56:15: 25000000 INFO @ Fri, 15 Feb 2019 06:56:18: 27000000 INFO @ Fri, 15 Feb 2019 06:56:22: 26000000 INFO @ Fri, 15 Feb 2019 06:56:22: 25000000 INFO @ Fri, 15 Feb 2019 06:56:25: 28000000 INFO @ Fri, 15 Feb 2019 06:56:28: 27000000 INFO @ Fri, 15 Feb 2019 06:56:29: 26000000 INFO @ Fri, 15 Feb 2019 06:56:31: 29000000 INFO @ Fri, 15 Feb 2019 06:56:35: 28000000 INFO @ Fri, 15 Feb 2019 06:56:36: 27000000 INFO @ Fri, 15 Feb 2019 06:56:38: 30000000 INFO @ Fri, 15 Feb 2019 06:56:42: 29000000 INFO @ Fri, 15 Feb 2019 06:56:43: 28000000 INFO @ Fri, 15 Feb 2019 06:56:44: 31000000 INFO @ Fri, 15 Feb 2019 06:56:49: 30000000 INFO @ Fri, 15 Feb 2019 06:56:50: 29000000 INFO @ Fri, 15 Feb 2019 06:56:50: 32000000 INFO @ Fri, 15 Feb 2019 06:56:56: 31000000 INFO @ Fri, 15 Feb 2019 06:56:57: 33000000 INFO @ Fri, 15 Feb 2019 06:56:57: 30000000 INFO @ Fri, 15 Feb 2019 06:57:03: 32000000 INFO @ Fri, 15 Feb 2019 06:57:03: 34000000 INFO @ Fri, 15 Feb 2019 06:57:05: 31000000 INFO @ Fri, 15 Feb 2019 06:57:09: 33000000 INFO @ Fri, 15 Feb 2019 06:57:10: 35000000 INFO @ Fri, 15 Feb 2019 06:57:12: 32000000 INFO @ Fri, 15 Feb 2019 06:57:16: 36000000 INFO @ Fri, 15 Feb 2019 06:57:16: 34000000 INFO @ Fri, 15 Feb 2019 06:57:19: 33000000 INFO @ Fri, 15 Feb 2019 06:57:22: 37000000 INFO @ Fri, 15 Feb 2019 06:57:23: 35000000 INFO @ Fri, 15 Feb 2019 06:57:26: 34000000 INFO @ Fri, 15 Feb 2019 06:57:29: 38000000 INFO @ Fri, 15 Feb 2019 06:57:30: 36000000 INFO @ Fri, 15 Feb 2019 06:57:33: 35000000 INFO @ Fri, 15 Feb 2019 06:57:35: 39000000 INFO @ Fri, 15 Feb 2019 06:57:37: 37000000 INFO @ Fri, 15 Feb 2019 06:57:40: 36000000 INFO @ Fri, 15 Feb 2019 06:57:41: 40000000 INFO @ Fri, 15 Feb 2019 06:57:43: 38000000 INFO @ Fri, 15 Feb 2019 06:57:47: 37000000 INFO @ Fri, 15 Feb 2019 06:57:48: 41000000 INFO @ Fri, 15 Feb 2019 06:57:50: 39000000 INFO @ Fri, 15 Feb 2019 06:57:54: 42000000 INFO @ Fri, 15 Feb 2019 06:57:54: 38000000 INFO @ Fri, 15 Feb 2019 06:57:57: 40000000 INFO @ Fri, 15 Feb 2019 06:58:00: 43000000 INFO @ Fri, 15 Feb 2019 06:58:01: 39000000 INFO @ Fri, 15 Feb 2019 06:58:04: 41000000 INFO @ Fri, 15 Feb 2019 06:58:07: 44000000 INFO @ Fri, 15 Feb 2019 06:58:09: 40000000 INFO @ Fri, 15 Feb 2019 06:58:11: 42000000 INFO @ Fri, 15 Feb 2019 06:58:13: 45000000 INFO @ Fri, 15 Feb 2019 06:58:16: 41000000 INFO @ Fri, 15 Feb 2019 06:58:17: 43000000 INFO @ Fri, 15 Feb 2019 06:58:19: 46000000 INFO @ Fri, 15 Feb 2019 06:58:23: 42000000 INFO @ Fri, 15 Feb 2019 06:58:24: 44000000 INFO @ Fri, 15 Feb 2019 06:58:26: 47000000 INFO @ Fri, 15 Feb 2019 06:58:30: 43000000 INFO @ Fri, 15 Feb 2019 06:58:31: 45000000 INFO @ Fri, 15 Feb 2019 06:58:32: 48000000 INFO @ Fri, 15 Feb 2019 06:58:37: 44000000 INFO @ Fri, 15 Feb 2019 06:58:38: 46000000 INFO @ Fri, 15 Feb 2019 06:58:39: 49000000 INFO @ Fri, 15 Feb 2019 06:58:44: 45000000 INFO @ Fri, 15 Feb 2019 06:58:45: 47000000 INFO @ Fri, 15 Feb 2019 06:58:45: 50000000 INFO @ Fri, 15 Feb 2019 06:58:51: 46000000 INFO @ Fri, 15 Feb 2019 06:58:51: 51000000 INFO @ Fri, 15 Feb 2019 06:58:51: 48000000 INFO @ Fri, 15 Feb 2019 06:58:58: 52000000 INFO @ Fri, 15 Feb 2019 06:58:58: 49000000 INFO @ Fri, 15 Feb 2019 06:58:58: 47000000 INFO @ Fri, 15 Feb 2019 06:59:04: 53000000 INFO @ Fri, 15 Feb 2019 06:59:05: 50000000 INFO @ Fri, 15 Feb 2019 06:59:05: 48000000 INFO @ Fri, 15 Feb 2019 06:59:10: 54000000 INFO @ Fri, 15 Feb 2019 06:59:12: 51000000 INFO @ Fri, 15 Feb 2019 06:59:12: 49000000 INFO @ Fri, 15 Feb 2019 06:59:17: 55000000 INFO @ Fri, 15 Feb 2019 06:59:18: 52000000 INFO @ Fri, 15 Feb 2019 06:59:19: 50000000 INFO @ Fri, 15 Feb 2019 06:59:23: 56000000 INFO @ Fri, 15 Feb 2019 06:59:25: 53000000 INFO @ Fri, 15 Feb 2019 06:59:27: 51000000 INFO @ Fri, 15 Feb 2019 06:59:30: 57000000 INFO @ Fri, 15 Feb 2019 06:59:32: 54000000 INFO @ Fri, 15 Feb 2019 06:59:34: 52000000 INFO @ Fri, 15 Feb 2019 06:59:36: 58000000 INFO @ Fri, 15 Feb 2019 06:59:39: 55000000 INFO @ Fri, 15 Feb 2019 06:59:41: 53000000 INFO @ Fri, 15 Feb 2019 06:59:42: 59000000 INFO @ Fri, 15 Feb 2019 06:59:46: 56000000 INFO @ Fri, 15 Feb 2019 06:59:48: 54000000 INFO @ Fri, 15 Feb 2019 06:59:49: 60000000 INFO @ Fri, 15 Feb 2019 06:59:53: 57000000 INFO @ Fri, 15 Feb 2019 06:59:55: 55000000 INFO @ Fri, 15 Feb 2019 06:59:55: 61000000 INFO @ Fri, 15 Feb 2019 06:59:59: 58000000 INFO @ Fri, 15 Feb 2019 07:00:02: 62000000 INFO @ Fri, 15 Feb 2019 07:00:02: 56000000 INFO @ Fri, 15 Feb 2019 07:00:06: 59000000 INFO @ Fri, 15 Feb 2019 07:00:08: 63000000 INFO @ Fri, 15 Feb 2019 07:00:09: 57000000 INFO @ Fri, 15 Feb 2019 07:00:13: 60000000 INFO @ Fri, 15 Feb 2019 07:00:15: #1 tag size is determined as 40 bps INFO @ Fri, 15 Feb 2019 07:00:15: #1 tag size = 40 INFO @ Fri, 15 Feb 2019 07:00:15: #1 total tags in treatment: 63913618 INFO @ Fri, 15 Feb 2019 07:00:15: #1 user defined the maximum tags... INFO @ Fri, 15 Feb 2019 07:00:15: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 15 Feb 2019 07:00:16: 58000000 INFO @ Fri, 15 Feb 2019 07:00:16: #1 tags after filtering in treatment: 63913576 INFO @ Fri, 15 Feb 2019 07:00:16: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 15 Feb 2019 07:00:16: #1 finished! INFO @ Fri, 15 Feb 2019 07:00:16: #2 Build Peak Model... INFO @ Fri, 15 Feb 2019 07:00:16: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 15 Feb 2019 07:00:20: 61000000 INFO @ Fri, 15 Feb 2019 07:00:22: #2 number of paired peaks: 3489 INFO @ Fri, 15 Feb 2019 07:00:22: start model_add_line... INFO @ Fri, 15 Feb 2019 07:00:22: start X-correlation... INFO @ Fri, 15 Feb 2019 07:00:22: end of X-cor INFO @ Fri, 15 Feb 2019 07:00:22: #2 finished! INFO @ Fri, 15 Feb 2019 07:00:22: #2 predicted fragment length is 39 bps INFO @ Fri, 15 Feb 2019 07:00:22: #2 alternative fragment length(s) may be 39,579 bps INFO @ Fri, 15 Feb 2019 07:00:22: #2.2 Generate R script for model : SRX3782460.10_model.r WARNING @ Fri, 15 Feb 2019 07:00:22: #2 Since the d (39) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 15 Feb 2019 07:00:22: #2 You may need to consider one of the other alternative d(s): 39,579 WARNING @ Fri, 15 Feb 2019 07:00:22: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 15 Feb 2019 07:00:22: #3 Call peaks... INFO @ Fri, 15 Feb 2019 07:00:22: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 15 Feb 2019 07:00:23: 59000000 INFO @ Fri, 15 Feb 2019 07:00:27: 62000000 INFO @ Fri, 15 Feb 2019 07:00:30: 60000000 INFO @ Fri, 15 Feb 2019 07:00:34: 63000000 INFO @ Fri, 15 Feb 2019 07:00:37: 61000000 INFO @ Fri, 15 Feb 2019 07:00:40: #1 tag size is determined as 40 bps INFO @ Fri, 15 Feb 2019 07:00:40: #1 tag size = 40 INFO @ Fri, 15 Feb 2019 07:00:40: #1 total tags in treatment: 63913618 INFO @ Fri, 15 Feb 2019 07:00:40: #1 user defined the maximum tags... INFO @ Fri, 15 Feb 2019 07:00:40: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 15 Feb 2019 07:00:42: #1 tags after filtering in treatment: 63913576 INFO @ Fri, 15 Feb 2019 07:00:42: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 15 Feb 2019 07:00:42: #1 finished! INFO @ Fri, 15 Feb 2019 07:00:42: #2 Build Peak Model... INFO @ Fri, 15 Feb 2019 07:00:42: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 15 Feb 2019 07:00:44: 62000000 INFO @ Fri, 15 Feb 2019 07:00:47: #2 number of paired peaks: 3489 INFO @ Fri, 15 Feb 2019 07:00:47: start model_add_line... INFO @ Fri, 15 Feb 2019 07:00:48: start X-correlation... INFO @ Fri, 15 Feb 2019 07:00:48: end of X-cor INFO @ Fri, 15 Feb 2019 07:00:48: #2 finished! INFO @ Fri, 15 Feb 2019 07:00:48: #2 predicted fragment length is 39 bps INFO @ Fri, 15 Feb 2019 07:00:48: #2 alternative fragment length(s) may be 39,579 bps INFO @ Fri, 15 Feb 2019 07:00:48: #2.2 Generate R script for model : SRX3782460.20_model.r WARNING @ Fri, 15 Feb 2019 07:00:48: #2 Since the d (39) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 15 Feb 2019 07:00:48: #2 You may need to consider one of the other alternative d(s): 39,579 WARNING @ Fri, 15 Feb 2019 07:00:48: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 15 Feb 2019 07:00:48: #3 Call peaks... INFO @ Fri, 15 Feb 2019 07:00:48: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 15 Feb 2019 07:00:51: 63000000 INFO @ Fri, 15 Feb 2019 07:00:57: #1 tag size is determined as 40 bps INFO @ Fri, 15 Feb 2019 07:00:57: #1 tag size = 40 INFO @ Fri, 15 Feb 2019 07:00:57: #1 total tags in treatment: 63913618 INFO @ Fri, 15 Feb 2019 07:00:57: #1 user defined the maximum tags... INFO @ Fri, 15 Feb 2019 07:00:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 15 Feb 2019 07:00:59: #1 tags after filtering in treatment: 63913576 INFO @ Fri, 15 Feb 2019 07:00:59: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 15 Feb 2019 07:00:59: #1 finished! INFO @ Fri, 15 Feb 2019 07:00:59: #2 Build Peak Model... INFO @ Fri, 15 Feb 2019 07:00:59: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 15 Feb 2019 07:01:04: #2 number of paired peaks: 3489 INFO @ Fri, 15 Feb 2019 07:01:04: start model_add_line... INFO @ Fri, 15 Feb 2019 07:01:05: start X-correlation... INFO @ Fri, 15 Feb 2019 07:01:05: end of X-cor INFO @ Fri, 15 Feb 2019 07:01:05: #2 finished! INFO @ Fri, 15 Feb 2019 07:01:05: #2 predicted fragment length is 39 bps INFO @ Fri, 15 Feb 2019 07:01:05: #2 alternative fragment length(s) may be 39,579 bps INFO @ Fri, 15 Feb 2019 07:01:05: #2.2 Generate R script for model : SRX3782460.05_model.r WARNING @ Fri, 15 Feb 2019 07:01:05: #2 Since the d (39) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 15 Feb 2019 07:01:05: #2 You may need to consider one of the other alternative d(s): 39,579 WARNING @ Fri, 15 Feb 2019 07:01:05: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 15 Feb 2019 07:01:05: #3 Call peaks... INFO @ Fri, 15 Feb 2019 07:01:05: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 15 Feb 2019 07:03:05: #3 Call peaks for each chromosome... INFO @ Fri, 15 Feb 2019 07:03:26: #3 Call peaks for each chromosome... INFO @ Fri, 15 Feb 2019 07:03:31: #3 Call peaks for each chromosome... INFO @ Fri, 15 Feb 2019 07:04:34: #4 Write output xls file... SRX3782460.10_peaks.xls INFO @ Fri, 15 Feb 2019 07:04:34: #4 Write peak in narrowPeak format file... SRX3782460.10_peaks.narrowPeak INFO @ Fri, 15 Feb 2019 07:04:34: #4 Write summits bed file... SRX3782460.10_summits.bed INFO @ Fri, 15 Feb 2019 07:04:34: Done! pass1 - making usageList (42 chroms): 2 millis pass2 - checking and writing primary data (1430 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Fri, 15 Feb 2019 07:05:10: #4 Write output xls file... SRX3782460.20_peaks.xls INFO @ Fri, 15 Feb 2019 07:05:10: #4 Write peak in narrowPeak format file... SRX3782460.20_peaks.narrowPeak INFO @ Fri, 15 Feb 2019 07:05:10: #4 Write summits bed file... SRX3782460.20_summits.bed INFO @ Fri, 15 Feb 2019 07:05:10: Done! pass1 - making usageList (33 chroms): 3 millis pass2 - checking and writing primary data (620 records, 4 fields): 4 millis CompletedMACS2peakCalling INFO @ Fri, 15 Feb 2019 07:05:13: #4 Write output xls file... SRX3782460.05_peaks.xls INFO @ Fri, 15 Feb 2019 07:05:13: #4 Write peak in narrowPeak format file... SRX3782460.05_peaks.narrowPeak INFO @ Fri, 15 Feb 2019 07:05:13: #4 Write summits bed file... SRX3782460.05_summits.bed INFO @ Fri, 15 Feb 2019 07:05:13: Done! pass1 - making usageList (57 chroms): 3 millis pass2 - checking and writing primary data (2611 records, 4 fields): 8 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。