Job ID = 10487608 sra ファイルのダウンロード中... Completed: 1711338K bytes transferred in 138 seconds (101456K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: SINGLE fastq に変換中... Written 65247238 spots for /home/okishinya/chipatlas/results/rn6/SRX3087688/SRR5927324.sra Written 65247238 spots total rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:20:53 65247238 reads; of these: 65247238 (100.00%) were unpaired; of these: 1689707 (2.59%) aligned 0 times 45801464 (70.20%) aligned exactly 1 time 17756067 (27.21%) aligned >1 times 97.41% overall alignment rate Time searching: 01:20:55 Overall time: 01:20:55 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 28 files... [bam_rmdupse_core] 3672622 / 63557531 = 0.0578 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 18 Mar 2018 11:44:21: # Command line: callpeak -t SRX3087688.bam -f BAM -g 2.15e9 -n SRX3087688.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX3087688.10 # format = BAM # ChIP-seq file = ['SRX3087688.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 18 Mar 2018 11:44:21: #1 read tag files... INFO @ Sun, 18 Mar 2018 11:44:21: #1 read treatment tags... INFO @ Sun, 18 Mar 2018 11:44:21: # Command line: callpeak -t SRX3087688.bam -f BAM -g 2.15e9 -n SRX3087688.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX3087688.05 # format = BAM # ChIP-seq file = ['SRX3087688.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 18 Mar 2018 11:44:21: #1 read tag files... INFO @ Sun, 18 Mar 2018 11:44:21: #1 read treatment tags... INFO @ Sun, 18 Mar 2018 11:44:21: # Command line: callpeak -t SRX3087688.bam -f BAM -g 2.15e9 -n SRX3087688.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX3087688.20 # format = BAM # ChIP-seq file = ['SRX3087688.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 18 Mar 2018 11:44:21: #1 read tag files... INFO @ Sun, 18 Mar 2018 11:44:21: #1 read treatment tags... INFO @ Sun, 18 Mar 2018 11:44:29: 1000000 INFO @ Sun, 18 Mar 2018 11:44:29: 1000000 INFO @ Sun, 18 Mar 2018 11:44:30: 1000000 INFO @ Sun, 18 Mar 2018 11:44:36: 2000000 INFO @ Sun, 18 Mar 2018 11:44:38: 2000000 INFO @ Sun, 18 Mar 2018 11:44:38: 2000000 INFO @ Sun, 18 Mar 2018 11:44:43: 3000000 INFO @ Sun, 18 Mar 2018 11:44:46: 3000000 INFO @ Sun, 18 Mar 2018 11:44:46: 3000000 INFO @ Sun, 18 Mar 2018 11:44:51: 4000000 INFO @ Sun, 18 Mar 2018 11:44:54: 4000000 INFO @ Sun, 18 Mar 2018 11:44:54: 4000000 INFO @ Sun, 18 Mar 2018 11:44:58: 5000000 INFO @ Sun, 18 Mar 2018 11:45:03: 5000000 INFO @ Sun, 18 Mar 2018 11:45:03: 5000000 INFO @ Sun, 18 Mar 2018 11:45:05: 6000000 INFO @ Sun, 18 Mar 2018 11:45:11: 6000000 INFO @ Sun, 18 Mar 2018 11:45:11: 6000000 INFO @ Sun, 18 Mar 2018 11:45:13: 7000000 INFO @ Sun, 18 Mar 2018 11:45:19: 7000000 INFO @ Sun, 18 Mar 2018 11:45:19: 7000000 INFO @ Sun, 18 Mar 2018 11:45:20: 8000000 INFO @ Sun, 18 Mar 2018 11:45:27: 9000000 INFO @ Sun, 18 Mar 2018 11:45:27: 8000000 INFO @ Sun, 18 Mar 2018 11:45:27: 8000000 INFO @ Sun, 18 Mar 2018 11:45:34: 10000000 INFO @ Sun, 18 Mar 2018 11:45:36: 9000000 INFO @ Sun, 18 Mar 2018 11:45:36: 9000000 INFO @ Sun, 18 Mar 2018 11:45:42: 11000000 INFO @ Sun, 18 Mar 2018 11:45:44: 10000000 INFO @ Sun, 18 Mar 2018 11:45:44: 10000000 INFO @ Sun, 18 Mar 2018 11:45:49: 12000000 INFO @ Sun, 18 Mar 2018 11:45:52: 11000000 INFO @ Sun, 18 Mar 2018 11:45:52: 11000000 INFO @ Sun, 18 Mar 2018 11:45:56: 13000000 INFO @ Sun, 18 Mar 2018 11:46:00: 12000000 INFO @ Sun, 18 Mar 2018 11:46:01: 12000000 INFO @ Sun, 18 Mar 2018 11:46:04: 14000000 INFO @ Sun, 18 Mar 2018 11:46:08: 13000000 INFO @ Sun, 18 Mar 2018 11:46:10: 13000000 INFO @ Sun, 18 Mar 2018 11:46:12: 15000000 INFO @ Sun, 18 Mar 2018 11:46:16: 14000000 INFO @ Sun, 18 Mar 2018 11:46:19: 14000000 INFO @ Sun, 18 Mar 2018 11:46:20: 16000000 INFO @ Sun, 18 Mar 2018 11:46:24: 15000000 INFO @ Sun, 18 Mar 2018 11:46:28: 15000000 INFO @ Sun, 18 Mar 2018 11:46:28: 17000000 INFO @ Sun, 18 Mar 2018 11:46:32: 16000000 INFO @ Sun, 18 Mar 2018 11:46:36: 18000000 INFO @ Sun, 18 Mar 2018 11:46:37: 16000000 INFO @ Sun, 18 Mar 2018 11:46:39: 17000000 INFO @ Sun, 18 Mar 2018 11:46:44: 19000000 INFO @ Sun, 18 Mar 2018 11:46:46: 17000000 INFO @ Sun, 18 Mar 2018 11:46:47: 18000000 INFO @ Sun, 18 Mar 2018 11:46:52: 20000000 INFO @ Sun, 18 Mar 2018 11:46:55: 18000000 INFO @ Sun, 18 Mar 2018 11:46:55: 19000000 INFO @ Sun, 18 Mar 2018 11:47:00: 21000000 INFO @ Sun, 18 Mar 2018 11:47:03: 20000000 INFO @ Sun, 18 Mar 2018 11:47:04: 19000000 INFO @ Sun, 18 Mar 2018 11:47:08: 22000000 INFO @ Sun, 18 Mar 2018 11:47:11: 21000000 INFO @ Sun, 18 Mar 2018 11:47:13: 20000000 INFO @ Sun, 18 Mar 2018 11:47:16: 23000000 INFO @ Sun, 18 Mar 2018 11:47:19: 22000000 INFO @ Sun, 18 Mar 2018 11:47:22: 21000000 INFO @ Sun, 18 Mar 2018 11:47:23: 24000000 INFO @ Sun, 18 Mar 2018 11:47:27: 23000000 INFO @ Sun, 18 Mar 2018 11:47:31: 22000000 INFO @ Sun, 18 Mar 2018 11:47:31: 25000000 INFO @ Sun, 18 Mar 2018 11:47:34: 24000000 INFO @ Sun, 18 Mar 2018 11:47:39: 26000000 INFO @ Sun, 18 Mar 2018 11:47:40: 23000000 INFO @ Sun, 18 Mar 2018 11:47:42: 25000000 INFO @ Sun, 18 Mar 2018 11:47:47: 27000000 INFO @ Sun, 18 Mar 2018 11:47:49: 24000000 INFO @ Sun, 18 Mar 2018 11:47:50: 26000000 INFO @ Sun, 18 Mar 2018 11:47:55: 28000000 INFO @ Sun, 18 Mar 2018 11:47:58: 27000000 INFO @ Sun, 18 Mar 2018 11:47:58: 25000000 INFO @ Sun, 18 Mar 2018 11:48:03: 29000000 INFO @ Sun, 18 Mar 2018 11:48:06: 28000000 INFO @ Sun, 18 Mar 2018 11:48:07: 26000000 INFO @ Sun, 18 Mar 2018 11:48:11: 30000000 INFO @ Sun, 18 Mar 2018 11:48:13: 29000000 INFO @ Sun, 18 Mar 2018 11:48:15: 27000000 INFO @ Sun, 18 Mar 2018 11:48:18: 31000000 INFO @ Sun, 18 Mar 2018 11:48:20: 30000000 INFO @ Sun, 18 Mar 2018 11:48:23: 28000000 INFO @ Sun, 18 Mar 2018 11:48:25: 32000000 INFO @ Sun, 18 Mar 2018 11:48:26: 31000000 INFO @ Sun, 18 Mar 2018 11:48:30: 29000000 INFO @ Sun, 18 Mar 2018 11:48:32: 33000000 INFO @ Sun, 18 Mar 2018 11:48:33: 32000000 INFO @ Sun, 18 Mar 2018 11:48:37: 30000000 INFO @ Sun, 18 Mar 2018 11:48:39: 34000000 INFO @ Sun, 18 Mar 2018 11:48:40: 33000000 INFO @ Sun, 18 Mar 2018 11:48:45: 31000000 INFO @ Sun, 18 Mar 2018 11:48:46: 35000000 INFO @ Sun, 18 Mar 2018 11:48:47: 34000000 INFO @ Sun, 18 Mar 2018 11:48:52: 32000000 INFO @ Sun, 18 Mar 2018 11:48:53: 36000000 INFO @ Sun, 18 Mar 2018 11:48:54: 35000000 INFO @ Sun, 18 Mar 2018 11:48:59: 37000000 INFO @ Sun, 18 Mar 2018 11:49:00: 33000000 INFO @ Sun, 18 Mar 2018 11:49:01: 36000000 INFO @ Sun, 18 Mar 2018 11:49:06: 38000000 INFO @ Sun, 18 Mar 2018 11:49:07: 34000000 INFO @ Sun, 18 Mar 2018 11:49:07: 37000000 INFO @ Sun, 18 Mar 2018 11:49:13: 39000000 INFO @ Sun, 18 Mar 2018 11:49:14: 38000000 INFO @ Sun, 18 Mar 2018 11:49:15: 35000000 INFO @ Sun, 18 Mar 2018 11:49:20: 40000000 INFO @ Sun, 18 Mar 2018 11:49:21: 39000000 INFO @ Sun, 18 Mar 2018 11:49:22: 36000000 INFO @ Sun, 18 Mar 2018 11:49:27: 41000000 INFO @ Sun, 18 Mar 2018 11:49:28: 40000000 INFO @ Sun, 18 Mar 2018 11:49:29: 37000000 INFO @ Sun, 18 Mar 2018 11:49:34: 42000000 INFO @ Sun, 18 Mar 2018 11:49:35: 41000000 INFO @ Sun, 18 Mar 2018 11:49:37: 38000000 INFO @ Sun, 18 Mar 2018 11:49:41: 43000000 INFO @ Sun, 18 Mar 2018 11:49:42: 42000000 INFO @ Sun, 18 Mar 2018 11:49:44: 39000000 INFO @ Sun, 18 Mar 2018 11:49:48: 44000000 INFO @ Sun, 18 Mar 2018 11:49:49: 43000000 INFO @ Sun, 18 Mar 2018 11:49:51: 40000000 INFO @ Sun, 18 Mar 2018 11:49:55: 45000000 INFO @ Sun, 18 Mar 2018 11:49:56: 44000000 INFO @ Sun, 18 Mar 2018 11:49:59: 41000000 INFO @ Sun, 18 Mar 2018 11:50:02: 46000000 INFO @ Sun, 18 Mar 2018 11:50:03: 45000000 INFO @ Sun, 18 Mar 2018 11:50:06: 42000000 INFO @ Sun, 18 Mar 2018 11:50:09: 47000000 INFO @ Sun, 18 Mar 2018 11:50:10: 46000000 INFO @ Sun, 18 Mar 2018 11:50:14: 43000000 INFO @ Sun, 18 Mar 2018 11:50:16: 48000000 INFO @ Sun, 18 Mar 2018 11:50:16: 47000000 INFO @ Sun, 18 Mar 2018 11:50:21: 44000000 INFO @ Sun, 18 Mar 2018 11:50:23: 49000000 INFO @ Sun, 18 Mar 2018 11:50:23: 48000000 INFO @ Sun, 18 Mar 2018 11:50:29: 45000000 INFO @ Sun, 18 Mar 2018 11:50:30: 50000000 INFO @ Sun, 18 Mar 2018 11:50:30: 49000000 INFO @ Sun, 18 Mar 2018 11:50:36: 46000000 INFO @ Sun, 18 Mar 2018 11:50:37: 50000000 INFO @ Sun, 18 Mar 2018 11:50:37: 51000000 INFO @ Sun, 18 Mar 2018 11:50:43: 47000000 INFO @ Sun, 18 Mar 2018 11:50:44: 51000000 INFO @ Sun, 18 Mar 2018 11:50:44: 52000000 INFO @ Sun, 18 Mar 2018 11:50:51: 53000000 INFO @ Sun, 18 Mar 2018 11:50:51: 48000000 INFO @ Sun, 18 Mar 2018 11:50:51: 52000000 INFO @ Sun, 18 Mar 2018 11:50:58: 54000000 INFO @ Sun, 18 Mar 2018 11:50:58: 49000000 INFO @ Sun, 18 Mar 2018 11:50:59: 53000000 INFO @ Sun, 18 Mar 2018 11:51:04: 55000000 INFO @ Sun, 18 Mar 2018 11:51:06: 50000000 INFO @ Sun, 18 Mar 2018 11:51:06: 54000000 INFO @ Sun, 18 Mar 2018 11:51:11: 56000000 INFO @ Sun, 18 Mar 2018 11:51:14: 55000000 INFO @ Sun, 18 Mar 2018 11:51:14: 51000000 INFO @ Sun, 18 Mar 2018 11:51:18: 57000000 INFO @ Sun, 18 Mar 2018 11:51:21: 56000000 INFO @ Sun, 18 Mar 2018 11:51:21: 52000000 INFO @ Sun, 18 Mar 2018 11:51:24: 58000000 INFO @ Sun, 18 Mar 2018 11:51:29: 53000000 INFO @ Sun, 18 Mar 2018 11:51:29: 57000000 INFO @ Sun, 18 Mar 2018 11:51:31: 59000000 INFO @ Sun, 18 Mar 2018 11:51:36: 58000000 INFO @ Sun, 18 Mar 2018 11:51:36: 54000000 INFO @ Sun, 18 Mar 2018 11:51:37: #1 tag size is determined as 61 bps INFO @ Sun, 18 Mar 2018 11:51:37: #1 tag size = 61 INFO @ Sun, 18 Mar 2018 11:51:37: #1 total tags in treatment: 59884909 INFO @ Sun, 18 Mar 2018 11:51:37: #1 user defined the maximum tags... INFO @ Sun, 18 Mar 2018 11:51:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 18 Mar 2018 11:51:39: #1 tags after filtering in treatment: 59884872 INFO @ Sun, 18 Mar 2018 11:51:39: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 18 Mar 2018 11:51:39: #1 finished! INFO @ Sun, 18 Mar 2018 11:51:39: #2 Build Peak Model... INFO @ Sun, 18 Mar 2018 11:51:39: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 18 Mar 2018 11:51:44: 59000000 INFO @ Sun, 18 Mar 2018 11:51:44: #2 number of paired peaks: 5810 INFO @ Sun, 18 Mar 2018 11:51:44: start model_add_line... INFO @ Sun, 18 Mar 2018 11:51:44: 55000000 INFO @ Sun, 18 Mar 2018 11:51:45: start X-correlation... INFO @ Sun, 18 Mar 2018 11:51:45: end of X-cor INFO @ Sun, 18 Mar 2018 11:51:45: #2 finished! INFO @ Sun, 18 Mar 2018 11:51:45: #2 predicted fragment length is 61 bps INFO @ Sun, 18 Mar 2018 11:51:45: #2 alternative fragment length(s) may be 61 bps INFO @ Sun, 18 Mar 2018 11:51:45: #2.2 Generate R script for model : SRX3087688.10_model.r WARNING @ Sun, 18 Mar 2018 11:51:45: #2 Since the d (61) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 18 Mar 2018 11:51:45: #2 You may need to consider one of the other alternative d(s): 61 WARNING @ Sun, 18 Mar 2018 11:51:45: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 18 Mar 2018 11:51:45: #3 Call peaks... INFO @ Sun, 18 Mar 2018 11:51:45: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 18 Mar 2018 11:51:51: #1 tag size is determined as 61 bps INFO @ Sun, 18 Mar 2018 11:51:51: #1 tag size = 61 INFO @ Sun, 18 Mar 2018 11:51:51: #1 total tags in treatment: 59884909 INFO @ Sun, 18 Mar 2018 11:51:51: #1 user defined the maximum tags... INFO @ Sun, 18 Mar 2018 11:51:51: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 18 Mar 2018 11:51:51: 56000000 INFO @ Sun, 18 Mar 2018 11:51:52: #1 tags after filtering in treatment: 59884872 INFO @ Sun, 18 Mar 2018 11:51:52: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 18 Mar 2018 11:51:52: #1 finished! INFO @ Sun, 18 Mar 2018 11:51:52: #2 Build Peak Model... INFO @ Sun, 18 Mar 2018 11:51:52: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 18 Mar 2018 11:51:57: #2 number of paired peaks: 5810 INFO @ Sun, 18 Mar 2018 11:51:57: start model_add_line... INFO @ Sun, 18 Mar 2018 11:51:58: start X-correlation... INFO @ Sun, 18 Mar 2018 11:51:58: end of X-cor INFO @ Sun, 18 Mar 2018 11:51:58: #2 finished! INFO @ Sun, 18 Mar 2018 11:51:58: #2 predicted fragment length is 61 bps INFO @ Sun, 18 Mar 2018 11:51:58: #2 alternative fragment length(s) may be 61 bps INFO @ Sun, 18 Mar 2018 11:51:58: #2.2 Generate R script for model : SRX3087688.20_model.r WARNING @ Sun, 18 Mar 2018 11:51:58: #2 Since the d (61) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 18 Mar 2018 11:51:58: #2 You may need to consider one of the other alternative d(s): 61 WARNING @ Sun, 18 Mar 2018 11:51:58: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 18 Mar 2018 11:51:58: #3 Call peaks... INFO @ Sun, 18 Mar 2018 11:51:58: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 18 Mar 2018 11:51:58: 57000000 INFO @ Sun, 18 Mar 2018 11:52:05: 58000000 INFO @ Sun, 18 Mar 2018 11:52:12: 59000000 INFO @ Sun, 18 Mar 2018 11:52:19: #1 tag size is determined as 61 bps INFO @ Sun, 18 Mar 2018 11:52:19: #1 tag size = 61 INFO @ Sun, 18 Mar 2018 11:52:19: #1 total tags in treatment: 59884909 INFO @ Sun, 18 Mar 2018 11:52:19: #1 user defined the maximum tags... INFO @ Sun, 18 Mar 2018 11:52:19: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 18 Mar 2018 11:52:20: #1 tags after filtering in treatment: 59884872 INFO @ Sun, 18 Mar 2018 11:52:20: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 18 Mar 2018 11:52:20: #1 finished! INFO @ Sun, 18 Mar 2018 11:52:20: #2 Build Peak Model... INFO @ Sun, 18 Mar 2018 11:52:20: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 18 Mar 2018 11:52:25: #2 number of paired peaks: 5810 INFO @ Sun, 18 Mar 2018 11:52:25: start model_add_line... INFO @ Sun, 18 Mar 2018 11:52:26: start X-correlation... INFO @ Sun, 18 Mar 2018 11:52:26: end of X-cor INFO @ Sun, 18 Mar 2018 11:52:26: #2 finished! INFO @ Sun, 18 Mar 2018 11:52:26: #2 predicted fragment length is 61 bps INFO @ Sun, 18 Mar 2018 11:52:26: #2 alternative fragment length(s) may be 61 bps INFO @ Sun, 18 Mar 2018 11:52:26: #2.2 Generate R script for model : SRX3087688.05_model.r WARNING @ Sun, 18 Mar 2018 11:52:26: #2 Since the d (61) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 18 Mar 2018 11:52:26: #2 You may need to consider one of the other alternative d(s): 61 WARNING @ Sun, 18 Mar 2018 11:52:26: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 18 Mar 2018 11:52:26: #3 Call peaks... INFO @ Sun, 18 Mar 2018 11:52:26: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 18 Mar 2018 11:54:06: #3 Call peaks for each chromosome... INFO @ Sun, 18 Mar 2018 11:54:41: #3 Call peaks for each chromosome... INFO @ Sun, 18 Mar 2018 11:54:41: #3 Call peaks for each chromosome... INFO @ Sun, 18 Mar 2018 11:55:30: #4 Write output xls file... SRX3087688.10_peaks.xls INFO @ Sun, 18 Mar 2018 11:55:30: #4 Write peak in narrowPeak format file... SRX3087688.10_peaks.narrowPeak INFO @ Sun, 18 Mar 2018 11:55:30: #4 Write summits bed file... SRX3087688.10_summits.bed INFO @ Sun, 18 Mar 2018 11:55:30: Done! pass1 - making usageList (48 chroms): 1 millis pass2 - checking and writing primary data (1545 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Sun, 18 Mar 2018 11:55:59: #4 Write output xls file... SRX3087688.05_peaks.xls INFO @ Sun, 18 Mar 2018 11:55:59: #4 Write peak in narrowPeak format file... SRX3087688.05_peaks.narrowPeak INFO @ Sun, 18 Mar 2018 11:55:59: #4 Write summits bed file... SRX3087688.05_summits.bed INFO @ Sun, 18 Mar 2018 11:55:59: Done! pass1 - making usageList (61 chroms): 1 millis pass2 - checking and writing primary data (2914 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Sun, 18 Mar 2018 11:56:02: #4 Write output xls file... SRX3087688.20_peaks.xls INFO @ Sun, 18 Mar 2018 11:56:02: #4 Write peak in narrowPeak format file... SRX3087688.20_peaks.narrowPeak INFO @ Sun, 18 Mar 2018 11:56:02: #4 Write summits bed file... SRX3087688.20_summits.bed INFO @ Sun, 18 Mar 2018 11:56:02: Done! pass1 - making usageList (36 chroms): 1 millis pass2 - checking and writing primary data (724 records, 4 fields): 4 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。