Job ID = 14518050 SRX = SRX10533691 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... Read 4000000 spots for SRR14165535/SRR14165535.sra Written 4000000 spots for SRR14165535/SRR14165535.sra 2022-01-14T23:02:37 prefetch.2.10.7: 1) Downloading 'SRR14165536'... 2022-01-14T23:02:37 prefetch.2.10.7: Downloading via HTTPS... 2022-01-14T23:02:48 prefetch.2.10.7: HTTPS download succeed 2022-01-14T23:02:48 prefetch.2.10.7: 'SRR14165536' is valid 2022-01-14T23:02:48 prefetch.2.10.7: 1) 'SRR14165536' was downloaded successfully 2022-01-14T23:02:48 prefetch.2.10.7: 'SRR14165536' has 0 unresolved dependencies Read 4000000 spots for SRR14165536/SRR14165536.sra Written 4000000 spots for SRR14165536/SRR14165536.sra Read 3349788 spots for SRR14165537/SRR14165537.sra Written 3349788 spots for SRR14165537/SRR14165537.sra 2022-01-14T23:03:22 prefetch.2.10.7: 1) Downloading 'SRR14165538'... 2022-01-14T23:03:22 prefetch.2.10.7: Downloading via HTTPS... 2022-01-14T23:03:32 prefetch.2.10.7: HTTPS download succeed 2022-01-14T23:03:32 prefetch.2.10.7: 'SRR14165538' is valid 2022-01-14T23:03:32 prefetch.2.10.7: 1) 'SRR14165538' was downloaded successfully 2022-01-14T23:03:32 prefetch.2.10.7: 'SRR14165538' has 0 unresolved dependencies Read 4000000 spots for SRR14165538/SRR14165538.sra Written 4000000 spots for SRR14165538/SRR14165538.sra Read 4000000 spots for SRR14165539/SRR14165539.sra Written 4000000 spots for SRR14165539/SRR14165539.sra 2022-01-14T23:04:12 prefetch.2.10.7: 1) Downloading 'SRR14165540'... 2022-01-14T23:04:12 prefetch.2.10.7: Downloading via HTTPS... 2022-01-14T23:04:22 prefetch.2.10.7: HTTPS download succeed 2022-01-14T23:04:22 prefetch.2.10.7: 'SRR14165540' is valid 2022-01-14T23:04:22 prefetch.2.10.7: 1) 'SRR14165540' was downloaded successfully 2022-01-14T23:04:22 prefetch.2.10.7: 'SRR14165540' has 0 unresolved dependencies Read 4000000 spots for SRR14165540/SRR14165540.sra Written 4000000 spots for SRR14165540/SRR14165540.sra Read 4000000 spots for SRR14165541/SRR14165541.sra Written 4000000 spots for SRR14165541/SRR14165541.sra 2022-01-14T23:05:01 prefetch.2.10.7: 1) Downloading 'SRR14165542'... 2022-01-14T23:05:01 prefetch.2.10.7: Downloading via HTTPS... 2022-01-14T23:05:11 prefetch.2.10.7: HTTPS download succeed 2022-01-14T23:05:11 prefetch.2.10.7: 'SRR14165542' is valid 2022-01-14T23:05:11 prefetch.2.10.7: 1) 'SRR14165542' was downloaded successfully 2022-01-14T23:05:11 prefetch.2.10.7: 'SRR14165542' has 0 unresolved dependencies Read 4000000 spots for SRR14165542/SRR14165542.sra Written 4000000 spots for SRR14165542/SRR14165542.sra 2022-01-14T23:05:35 prefetch.2.10.7: 1) Downloading 'SRR14165543'... 2022-01-14T23:05:35 prefetch.2.10.7: Downloading via HTTPS... 2022-01-14T23:05:46 prefetch.2.10.7: HTTPS download succeed 2022-01-14T23:05:46 prefetch.2.10.7: 'SRR14165543' is valid 2022-01-14T23:05:46 prefetch.2.10.7: 1) 'SRR14165543' was downloaded successfully 2022-01-14T23:05:46 prefetch.2.10.7: 'SRR14165543' has 0 unresolved dependencies Read 4000000 spots for SRR14165543/SRR14165543.sra Written 4000000 spots for SRR14165543/SRR14165543.sra 2022-01-14T23:06:07 prefetch.2.10.7: 1) Downloading 'SRR14165544'... 2022-01-14T23:06:07 prefetch.2.10.7: Downloading via HTTPS... 2022-01-14T23:06:16 prefetch.2.10.7: HTTPS download succeed 2022-01-14T23:06:17 prefetch.2.10.7: 'SRR14165544' is valid 2022-01-14T23:06:17 prefetch.2.10.7: 1) 'SRR14165544' was downloaded successfully 2022-01-14T23:06:17 prefetch.2.10.7: 'SRR14165544' has 0 unresolved dependencies Read 4000000 spots for SRR14165544/SRR14165544.sra Written 4000000 spots for SRR14165544/SRR14165544.sra 2022-01-14T23:06:41 prefetch.2.10.7: 1) Downloading 'SRR14165545'... 2022-01-14T23:06:41 prefetch.2.10.7: Downloading via HTTPS... 2022-01-14T23:06:52 prefetch.2.10.7: HTTPS download succeed 2022-01-14T23:06:52 prefetch.2.10.7: 'SRR14165545' is valid 2022-01-14T23:06:52 prefetch.2.10.7: 1) 'SRR14165545' was downloaded successfully 2022-01-14T23:06:52 prefetch.2.10.7: 'SRR14165545' has 0 unresolved dependencies Read 4000000 spots for SRR14165545/SRR14165545.sra Written 4000000 spots for SRR14165545/SRR14165545.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:22:43 43349788 reads; of these: 43349788 (100.00%) were unpaired; of these: 12114344 (27.95%) aligned 0 times 23294478 (53.74%) aligned exactly 1 time 7940966 (18.32%) aligned >1 times 72.05% overall alignment rate Time searching: 00:22:44 Overall time: 00:22:44 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 16 files... [bam_rmdupse_core] 3665902 / 31235444 = 0.1174 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 15 Jan 2022 08:39:46: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 15 Jan 2022 08:39:46: #1 read tag files... INFO @ Sat, 15 Jan 2022 08:39:46: #1 read treatment tags... INFO @ Sat, 15 Jan 2022 08:39:52: 1000000 INFO @ Sat, 15 Jan 2022 08:39:57: 2000000 INFO @ Sat, 15 Jan 2022 08:40:03: 3000000 INFO @ Sat, 15 Jan 2022 08:40:09: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 15 Jan 2022 08:40:15: 5000000 INFO @ Sat, 15 Jan 2022 08:40:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 15 Jan 2022 08:40:16: #1 read tag files... INFO @ Sat, 15 Jan 2022 08:40:16: #1 read treatment tags... INFO @ Sat, 15 Jan 2022 08:40:21: 6000000 INFO @ Sat, 15 Jan 2022 08:40:23: 1000000 INFO @ Sat, 15 Jan 2022 08:40:28: 7000000 INFO @ Sat, 15 Jan 2022 08:40:31: 2000000 INFO @ Sat, 15 Jan 2022 08:40:35: 8000000 INFO @ Sat, 15 Jan 2022 08:40:38: 3000000 INFO @ Sat, 15 Jan 2022 08:40:42: 9000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 15 Jan 2022 08:40:46: 4000000 INFO @ Sat, 15 Jan 2022 08:40:46: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 15 Jan 2022 08:40:46: #1 read tag files... INFO @ Sat, 15 Jan 2022 08:40:46: #1 read treatment tags... INFO @ Sat, 15 Jan 2022 08:40:48: 10000000 INFO @ Sat, 15 Jan 2022 08:40:53: 5000000 INFO @ Sat, 15 Jan 2022 08:40:53: 1000000 INFO @ Sat, 15 Jan 2022 08:40:55: 11000000 INFO @ Sat, 15 Jan 2022 08:41:01: 6000000 INFO @ Sat, 15 Jan 2022 08:41:01: 2000000 INFO @ Sat, 15 Jan 2022 08:41:02: 12000000 INFO @ Sat, 15 Jan 2022 08:41:08: 7000000 INFO @ Sat, 15 Jan 2022 08:41:08: 3000000 INFO @ Sat, 15 Jan 2022 08:41:09: 13000000 INFO @ Sat, 15 Jan 2022 08:41:15: 4000000 INFO @ Sat, 15 Jan 2022 08:41:16: 8000000 INFO @ Sat, 15 Jan 2022 08:41:16: 14000000 INFO @ Sat, 15 Jan 2022 08:41:23: 15000000 INFO @ Sat, 15 Jan 2022 08:41:23: 5000000 INFO @ Sat, 15 Jan 2022 08:41:23: 9000000 INFO @ Sat, 15 Jan 2022 08:41:29: 16000000 INFO @ Sat, 15 Jan 2022 08:41:30: 6000000 INFO @ Sat, 15 Jan 2022 08:41:30: 10000000 INFO @ Sat, 15 Jan 2022 08:41:36: 17000000 INFO @ Sat, 15 Jan 2022 08:41:38: 7000000 INFO @ Sat, 15 Jan 2022 08:41:38: 11000000 INFO @ Sat, 15 Jan 2022 08:41:43: 18000000 INFO @ Sat, 15 Jan 2022 08:41:45: 8000000 INFO @ Sat, 15 Jan 2022 08:41:45: 12000000 INFO @ Sat, 15 Jan 2022 08:41:50: 19000000 INFO @ Sat, 15 Jan 2022 08:41:52: 9000000 INFO @ Sat, 15 Jan 2022 08:41:53: 13000000 INFO @ Sat, 15 Jan 2022 08:41:57: 20000000 INFO @ Sat, 15 Jan 2022 08:42:00: 10000000 INFO @ Sat, 15 Jan 2022 08:42:00: 14000000 INFO @ Sat, 15 Jan 2022 08:42:03: 21000000 INFO @ Sat, 15 Jan 2022 08:42:07: 11000000 INFO @ Sat, 15 Jan 2022 08:42:08: 15000000 INFO @ Sat, 15 Jan 2022 08:42:10: 22000000 INFO @ Sat, 15 Jan 2022 08:42:14: 12000000 INFO @ Sat, 15 Jan 2022 08:42:15: 16000000 INFO @ Sat, 15 Jan 2022 08:42:17: 23000000 INFO @ Sat, 15 Jan 2022 08:42:22: 13000000 INFO @ Sat, 15 Jan 2022 08:42:23: 17000000 INFO @ Sat, 15 Jan 2022 08:42:24: 24000000 INFO @ Sat, 15 Jan 2022 08:42:29: 14000000 INFO @ Sat, 15 Jan 2022 08:42:30: 18000000 INFO @ Sat, 15 Jan 2022 08:42:31: 25000000 INFO @ Sat, 15 Jan 2022 08:42:37: 15000000 INFO @ Sat, 15 Jan 2022 08:42:37: 26000000 INFO @ Sat, 15 Jan 2022 08:42:38: 19000000 INFO @ Sat, 15 Jan 2022 08:42:44: 16000000 INFO @ Sat, 15 Jan 2022 08:42:44: 27000000 INFO @ Sat, 15 Jan 2022 08:42:45: 20000000 INFO @ Sat, 15 Jan 2022 08:42:48: #1 tag size is determined as 51 bps INFO @ Sat, 15 Jan 2022 08:42:48: #1 tag size = 51 INFO @ Sat, 15 Jan 2022 08:42:48: #1 total tags in treatment: 27569542 INFO @ Sat, 15 Jan 2022 08:42:48: #1 user defined the maximum tags... INFO @ Sat, 15 Jan 2022 08:42:48: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 15 Jan 2022 08:42:49: #1 tags after filtering in treatment: 27569448 INFO @ Sat, 15 Jan 2022 08:42:49: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 15 Jan 2022 08:42:49: #1 finished! INFO @ Sat, 15 Jan 2022 08:42:49: #2 Build Peak Model... INFO @ Sat, 15 Jan 2022 08:42:49: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 15 Jan 2022 08:42:51: 17000000 INFO @ Sat, 15 Jan 2022 08:42:51: #2 number of paired peaks: 5721 INFO @ Sat, 15 Jan 2022 08:42:51: start model_add_line... INFO @ Sat, 15 Jan 2022 08:42:52: start X-correlation... INFO @ Sat, 15 Jan 2022 08:42:52: end of X-cor INFO @ Sat, 15 Jan 2022 08:42:52: #2 finished! INFO @ Sat, 15 Jan 2022 08:42:52: #2 predicted fragment length is 52 bps INFO @ Sat, 15 Jan 2022 08:42:52: #2 alternative fragment length(s) may be 52,148 bps INFO @ Sat, 15 Jan 2022 08:42:52: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.05_model.r WARNING @ Sat, 15 Jan 2022 08:42:52: #2 Since the d (52) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 15 Jan 2022 08:42:52: #2 You may need to consider one of the other alternative d(s): 52,148 WARNING @ Sat, 15 Jan 2022 08:42:52: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 15 Jan 2022 08:42:52: #3 Call peaks... INFO @ Sat, 15 Jan 2022 08:42:52: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 15 Jan 2022 08:42:52: 21000000 INFO @ Sat, 15 Jan 2022 08:42:59: 18000000 INFO @ Sat, 15 Jan 2022 08:43:00: 22000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 15 Jan 2022 08:43:06: 19000000 INFO @ Sat, 15 Jan 2022 08:43:07: 23000000 INFO @ Sat, 15 Jan 2022 08:43:13: 20000000 INFO @ Sat, 15 Jan 2022 08:43:14: 24000000 INFO @ Sat, 15 Jan 2022 08:43:20: 21000000 INFO @ Sat, 15 Jan 2022 08:43:22: 25000000 INFO @ Sat, 15 Jan 2022 08:43:27: 22000000 INFO @ Sat, 15 Jan 2022 08:43:29: 26000000 INFO @ Sat, 15 Jan 2022 08:43:35: 23000000 INFO @ Sat, 15 Jan 2022 08:43:36: 27000000 INFO @ Sat, 15 Jan 2022 08:43:41: #1 tag size is determined as 51 bps INFO @ Sat, 15 Jan 2022 08:43:41: #1 tag size = 51 INFO @ Sat, 15 Jan 2022 08:43:41: #1 total tags in treatment: 27569542 INFO @ Sat, 15 Jan 2022 08:43:41: #1 user defined the maximum tags... INFO @ Sat, 15 Jan 2022 08:43:41: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 15 Jan 2022 08:43:41: #1 tags after filtering in treatment: 27569448 INFO @ Sat, 15 Jan 2022 08:43:41: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 15 Jan 2022 08:43:41: #1 finished! INFO @ Sat, 15 Jan 2022 08:43:41: #2 Build Peak Model... INFO @ Sat, 15 Jan 2022 08:43:41: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 15 Jan 2022 08:43:42: 24000000 INFO @ Sat, 15 Jan 2022 08:43:44: #2 number of paired peaks: 5721 INFO @ Sat, 15 Jan 2022 08:43:44: start model_add_line... INFO @ Sat, 15 Jan 2022 08:43:44: start X-correlation... INFO @ Sat, 15 Jan 2022 08:43:44: end of X-cor INFO @ Sat, 15 Jan 2022 08:43:44: #2 finished! INFO @ Sat, 15 Jan 2022 08:43:44: #2 predicted fragment length is 52 bps INFO @ Sat, 15 Jan 2022 08:43:44: #2 alternative fragment length(s) may be 52,148 bps INFO @ Sat, 15 Jan 2022 08:43:44: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.10_model.r WARNING @ Sat, 15 Jan 2022 08:43:44: #2 Since the d (52) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 15 Jan 2022 08:43:44: #2 You may need to consider one of the other alternative d(s): 52,148 WARNING @ Sat, 15 Jan 2022 08:43:44: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 15 Jan 2022 08:43:44: #3 Call peaks... INFO @ Sat, 15 Jan 2022 08:43:44: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 15 Jan 2022 08:43:49: 25000000 INFO @ Sat, 15 Jan 2022 08:43:50: #3 Call peaks for each chromosome... INFO @ Sat, 15 Jan 2022 08:43:56: 26000000 BigWig に変換しました。 INFO @ Sat, 15 Jan 2022 08:44:03: 27000000 INFO @ Sat, 15 Jan 2022 08:44:07: #1 tag size is determined as 51 bps INFO @ Sat, 15 Jan 2022 08:44:07: #1 tag size = 51 INFO @ Sat, 15 Jan 2022 08:44:07: #1 total tags in treatment: 27569542 INFO @ Sat, 15 Jan 2022 08:44:07: #1 user defined the maximum tags... INFO @ Sat, 15 Jan 2022 08:44:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 15 Jan 2022 08:44:07: #1 tags after filtering in treatment: 27569448 INFO @ Sat, 15 Jan 2022 08:44:07: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 15 Jan 2022 08:44:07: #1 finished! INFO @ Sat, 15 Jan 2022 08:44:07: #2 Build Peak Model... INFO @ Sat, 15 Jan 2022 08:44:07: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 15 Jan 2022 08:44:10: #2 number of paired peaks: 5721 INFO @ Sat, 15 Jan 2022 08:44:10: start model_add_line... INFO @ Sat, 15 Jan 2022 08:44:10: start X-correlation... INFO @ Sat, 15 Jan 2022 08:44:10: end of X-cor INFO @ Sat, 15 Jan 2022 08:44:10: #2 finished! INFO @ Sat, 15 Jan 2022 08:44:10: #2 predicted fragment length is 52 bps INFO @ Sat, 15 Jan 2022 08:44:10: #2 alternative fragment length(s) may be 52,148 bps INFO @ Sat, 15 Jan 2022 08:44:10: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.20_model.r WARNING @ Sat, 15 Jan 2022 08:44:10: #2 Since the d (52) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 15 Jan 2022 08:44:10: #2 You may need to consider one of the other alternative d(s): 52,148 WARNING @ Sat, 15 Jan 2022 08:44:10: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 15 Jan 2022 08:44:10: #3 Call peaks... INFO @ Sat, 15 Jan 2022 08:44:10: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 15 Jan 2022 08:44:20: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.05_peaks.xls INFO @ Sat, 15 Jan 2022 08:44:21: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.05_peaks.narrowPeak INFO @ Sat, 15 Jan 2022 08:44:21: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.05_summits.bed INFO @ Sat, 15 Jan 2022 08:44:21: Done! pass1 - making usageList (75 chroms): 0 millis pass2 - checking and writing primary data (2113 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Sat, 15 Jan 2022 08:44:44: #3 Call peaks for each chromosome... INFO @ Sat, 15 Jan 2022 08:45:07: #3 Call peaks for each chromosome... INFO @ Sat, 15 Jan 2022 08:45:15: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.10_peaks.xls INFO @ Sat, 15 Jan 2022 08:45:15: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.10_peaks.narrowPeak INFO @ Sat, 15 Jan 2022 08:45:15: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.10_summits.bed INFO @ Sat, 15 Jan 2022 08:45:15: Done! pass1 - making usageList (62 chroms): 1 millis pass2 - checking and writing primary data (1126 records, 4 fields): 76 millis CompletedMACS2peakCalling INFO @ Sat, 15 Jan 2022 08:45:39: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.20_peaks.xls INFO @ Sat, 15 Jan 2022 08:45:39: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.20_peaks.narrowPeak INFO @ Sat, 15 Jan 2022 08:45:39: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX10533691/SRX10533691.20_summits.bed INFO @ Sat, 15 Jan 2022 08:45:39: Done! pass1 - making usageList (48 chroms): 0 millis pass2 - checking and writing primary data (533 records, 4 fields): 3 millis CompletedMACS2peakCalling