Job ID = 14519442 SRX = ERX2745134 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... Read 84399989 spots for ERR2731909/ERR2731909.sra Written 84399989 spots for ERR2731909/ERR2731909.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:58:46 84399989 reads; of these: 84399989 (100.00%) were unpaired; of these: 2572437 (3.05%) aligned 0 times 57533971 (68.17%) aligned exactly 1 time 24293581 (28.78%) aligned >1 times 96.95% overall alignment rate Time searching: 00:58:47 Overall time: 00:58:47 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 36 files... [bam_rmdupse_core] 20810741 / 81827552 = 0.2543 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 15 Jan 2022 15:57:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 15 Jan 2022 15:57:47: #1 read tag files... INFO @ Sat, 15 Jan 2022 15:57:47: #1 read treatment tags... INFO @ Sat, 15 Jan 2022 15:57:53: 1000000 INFO @ Sat, 15 Jan 2022 15:57:59: 2000000 INFO @ Sat, 15 Jan 2022 15:58:05: 3000000 INFO @ Sat, 15 Jan 2022 15:58:10: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 15 Jan 2022 15:58:16: 5000000 INFO @ Sat, 15 Jan 2022 15:58:17: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 15 Jan 2022 15:58:17: #1 read tag files... INFO @ Sat, 15 Jan 2022 15:58:17: #1 read treatment tags... INFO @ Sat, 15 Jan 2022 15:58:22: 6000000 INFO @ Sat, 15 Jan 2022 15:58:23: 1000000 INFO @ Sat, 15 Jan 2022 15:58:28: 7000000 INFO @ Sat, 15 Jan 2022 15:58:29: 2000000 INFO @ Sat, 15 Jan 2022 15:58:34: 8000000 INFO @ Sat, 15 Jan 2022 15:58:35: 3000000 INFO @ Sat, 15 Jan 2022 15:58:40: 9000000 INFO @ Sat, 15 Jan 2022 15:58:41: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 15 Jan 2022 15:58:46: 10000000 INFO @ Sat, 15 Jan 2022 15:58:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 15 Jan 2022 15:58:47: #1 read tag files... INFO @ Sat, 15 Jan 2022 15:58:47: #1 read treatment tags... INFO @ Sat, 15 Jan 2022 15:58:47: 5000000 INFO @ Sat, 15 Jan 2022 15:58:53: 11000000 INFO @ Sat, 15 Jan 2022 15:58:53: 1000000 INFO @ Sat, 15 Jan 2022 15:58:53: 6000000 INFO @ Sat, 15 Jan 2022 15:58:59: 12000000 INFO @ Sat, 15 Jan 2022 15:58:59: 2000000 INFO @ Sat, 15 Jan 2022 15:59:00: 7000000 INFO @ Sat, 15 Jan 2022 15:59:05: 13000000 INFO @ Sat, 15 Jan 2022 15:59:06: 3000000 INFO @ Sat, 15 Jan 2022 15:59:06: 8000000 INFO @ Sat, 15 Jan 2022 15:59:11: 14000000 INFO @ Sat, 15 Jan 2022 15:59:12: 4000000 INFO @ Sat, 15 Jan 2022 15:59:12: 9000000 INFO @ Sat, 15 Jan 2022 15:59:17: 15000000 INFO @ Sat, 15 Jan 2022 15:59:18: 5000000 INFO @ Sat, 15 Jan 2022 15:59:18: 10000000 INFO @ Sat, 15 Jan 2022 15:59:23: 16000000 INFO @ Sat, 15 Jan 2022 15:59:24: 6000000 INFO @ Sat, 15 Jan 2022 15:59:24: 11000000 INFO @ Sat, 15 Jan 2022 15:59:29: 17000000 INFO @ Sat, 15 Jan 2022 15:59:30: 7000000 INFO @ Sat, 15 Jan 2022 15:59:30: 12000000 INFO @ Sat, 15 Jan 2022 15:59:35: 18000000 INFO @ Sat, 15 Jan 2022 15:59:36: 8000000 INFO @ Sat, 15 Jan 2022 15:59:37: 13000000 INFO @ Sat, 15 Jan 2022 15:59:42: 19000000 INFO @ Sat, 15 Jan 2022 15:59:42: 9000000 INFO @ Sat, 15 Jan 2022 15:59:43: 14000000 INFO @ Sat, 15 Jan 2022 15:59:48: 20000000 INFO @ Sat, 15 Jan 2022 15:59:48: 10000000 INFO @ Sat, 15 Jan 2022 15:59:49: 15000000 INFO @ Sat, 15 Jan 2022 15:59:54: 21000000 INFO @ Sat, 15 Jan 2022 15:59:54: 11000000 INFO @ Sat, 15 Jan 2022 15:59:55: 16000000 INFO @ Sat, 15 Jan 2022 16:00:00: 22000000 INFO @ Sat, 15 Jan 2022 16:00:01: 12000000 INFO @ Sat, 15 Jan 2022 16:00:01: 17000000 INFO @ Sat, 15 Jan 2022 16:00:06: 23000000 INFO @ Sat, 15 Jan 2022 16:00:07: 13000000 INFO @ Sat, 15 Jan 2022 16:00:07: 18000000 INFO @ Sat, 15 Jan 2022 16:00:12: 24000000 INFO @ Sat, 15 Jan 2022 16:00:13: 14000000 INFO @ Sat, 15 Jan 2022 16:00:14: 19000000 INFO @ Sat, 15 Jan 2022 16:00:18: 25000000 INFO @ Sat, 15 Jan 2022 16:00:19: 15000000 INFO @ Sat, 15 Jan 2022 16:00:20: 20000000 INFO @ Sat, 15 Jan 2022 16:00:24: 26000000 INFO @ Sat, 15 Jan 2022 16:00:25: 16000000 INFO @ Sat, 15 Jan 2022 16:00:26: 21000000 INFO @ Sat, 15 Jan 2022 16:00:30: 27000000 INFO @ Sat, 15 Jan 2022 16:00:31: 17000000 INFO @ Sat, 15 Jan 2022 16:00:32: 22000000 INFO @ Sat, 15 Jan 2022 16:00:37: 28000000 INFO @ Sat, 15 Jan 2022 16:00:37: 18000000 INFO @ Sat, 15 Jan 2022 16:00:38: 23000000 INFO @ Sat, 15 Jan 2022 16:00:43: 29000000 INFO @ Sat, 15 Jan 2022 16:00:43: 19000000 INFO @ Sat, 15 Jan 2022 16:00:44: 24000000 INFO @ Sat, 15 Jan 2022 16:00:49: 30000000 INFO @ Sat, 15 Jan 2022 16:00:49: 20000000 INFO @ Sat, 15 Jan 2022 16:00:50: 25000000 INFO @ Sat, 15 Jan 2022 16:00:55: 31000000 INFO @ Sat, 15 Jan 2022 16:00:55: 21000000 INFO @ Sat, 15 Jan 2022 16:00:57: 26000000 INFO @ Sat, 15 Jan 2022 16:01:01: 32000000 INFO @ Sat, 15 Jan 2022 16:01:01: 22000000 INFO @ Sat, 15 Jan 2022 16:01:03: 27000000 INFO @ Sat, 15 Jan 2022 16:01:07: 33000000 INFO @ Sat, 15 Jan 2022 16:01:08: 23000000 INFO @ Sat, 15 Jan 2022 16:01:09: 28000000 INFO @ Sat, 15 Jan 2022 16:01:12: 34000000 INFO @ Sat, 15 Jan 2022 16:01:14: 24000000 INFO @ Sat, 15 Jan 2022 16:01:15: 29000000 INFO @ Sat, 15 Jan 2022 16:01:18: 35000000 INFO @ Sat, 15 Jan 2022 16:01:20: 25000000 INFO @ Sat, 15 Jan 2022 16:01:21: 30000000 INFO @ Sat, 15 Jan 2022 16:01:24: 36000000 INFO @ Sat, 15 Jan 2022 16:01:26: 26000000 INFO @ Sat, 15 Jan 2022 16:01:27: 31000000 INFO @ Sat, 15 Jan 2022 16:01:30: 37000000 INFO @ Sat, 15 Jan 2022 16:01:32: 27000000 INFO @ Sat, 15 Jan 2022 16:01:33: 32000000 INFO @ Sat, 15 Jan 2022 16:01:36: 38000000 INFO @ Sat, 15 Jan 2022 16:01:38: 28000000 INFO @ Sat, 15 Jan 2022 16:01:39: 33000000 INFO @ Sat, 15 Jan 2022 16:01:42: 39000000 INFO @ Sat, 15 Jan 2022 16:01:44: 29000000 INFO @ Sat, 15 Jan 2022 16:01:45: 34000000 INFO @ Sat, 15 Jan 2022 16:01:48: 40000000 INFO @ Sat, 15 Jan 2022 16:01:51: 30000000 INFO @ Sat, 15 Jan 2022 16:01:51: 35000000 INFO @ Sat, 15 Jan 2022 16:01:54: 41000000 INFO @ Sat, 15 Jan 2022 16:01:57: 31000000 INFO @ Sat, 15 Jan 2022 16:01:57: 36000000 INFO @ Sat, 15 Jan 2022 16:01:59: 42000000 INFO @ Sat, 15 Jan 2022 16:02:03: 32000000 INFO @ Sat, 15 Jan 2022 16:02:03: 37000000 INFO @ Sat, 15 Jan 2022 16:02:05: 43000000 INFO @ Sat, 15 Jan 2022 16:02:09: 33000000 INFO @ Sat, 15 Jan 2022 16:02:09: 38000000 INFO @ Sat, 15 Jan 2022 16:02:11: 44000000 INFO @ Sat, 15 Jan 2022 16:02:14: 34000000 INFO @ Sat, 15 Jan 2022 16:02:15: 39000000 INFO @ Sat, 15 Jan 2022 16:02:17: 45000000 INFO @ Sat, 15 Jan 2022 16:02:20: 35000000 INFO @ Sat, 15 Jan 2022 16:02:21: 40000000 INFO @ Sat, 15 Jan 2022 16:02:23: 46000000 INFO @ Sat, 15 Jan 2022 16:02:26: 36000000 INFO @ Sat, 15 Jan 2022 16:02:27: 41000000 INFO @ Sat, 15 Jan 2022 16:02:28: 47000000 INFO @ Sat, 15 Jan 2022 16:02:32: 37000000 INFO @ Sat, 15 Jan 2022 16:02:33: 42000000 INFO @ Sat, 15 Jan 2022 16:02:34: 48000000 INFO @ Sat, 15 Jan 2022 16:02:38: 38000000 INFO @ Sat, 15 Jan 2022 16:02:39: 43000000 INFO @ Sat, 15 Jan 2022 16:02:40: 49000000 INFO @ Sat, 15 Jan 2022 16:02:44: 39000000 INFO @ Sat, 15 Jan 2022 16:02:44: 44000000 INFO @ Sat, 15 Jan 2022 16:02:46: 50000000 INFO @ Sat, 15 Jan 2022 16:02:50: 40000000 INFO @ Sat, 15 Jan 2022 16:02:50: 45000000 INFO @ Sat, 15 Jan 2022 16:02:52: 51000000 INFO @ Sat, 15 Jan 2022 16:02:56: 41000000 INFO @ Sat, 15 Jan 2022 16:02:56: 46000000 INFO @ Sat, 15 Jan 2022 16:02:58: 52000000 INFO @ Sat, 15 Jan 2022 16:03:02: 42000000 INFO @ Sat, 15 Jan 2022 16:03:02: 47000000 INFO @ Sat, 15 Jan 2022 16:03:03: 53000000 INFO @ Sat, 15 Jan 2022 16:03:08: 43000000 INFO @ Sat, 15 Jan 2022 16:03:08: 48000000 INFO @ Sat, 15 Jan 2022 16:03:09: 54000000 INFO @ Sat, 15 Jan 2022 16:03:14: 44000000 INFO @ Sat, 15 Jan 2022 16:03:14: 49000000 INFO @ Sat, 15 Jan 2022 16:03:15: 55000000 INFO @ Sat, 15 Jan 2022 16:03:19: 45000000 INFO @ Sat, 15 Jan 2022 16:03:20: 50000000 INFO @ Sat, 15 Jan 2022 16:03:21: 56000000 INFO @ Sat, 15 Jan 2022 16:03:25: 46000000 INFO @ Sat, 15 Jan 2022 16:03:26: 51000000 INFO @ Sat, 15 Jan 2022 16:03:27: 57000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 15 Jan 2022 16:03:31: 47000000 INFO @ Sat, 15 Jan 2022 16:03:32: 52000000 INFO @ Sat, 15 Jan 2022 16:03:33: 58000000 INFO @ Sat, 15 Jan 2022 16:03:37: 48000000 INFO @ Sat, 15 Jan 2022 16:03:38: 53000000 INFO @ Sat, 15 Jan 2022 16:03:39: 59000000 INFO @ Sat, 15 Jan 2022 16:03:43: 49000000 INFO @ Sat, 15 Jan 2022 16:03:44: 54000000 INFO @ Sat, 15 Jan 2022 16:03:44: 60000000 INFO @ Sat, 15 Jan 2022 16:03:49: 50000000 INFO @ Sat, 15 Jan 2022 16:03:50: 55000000 INFO @ Sat, 15 Jan 2022 16:03:50: 61000000 INFO @ Sat, 15 Jan 2022 16:03:51: #1 tag size is determined as 50 bps INFO @ Sat, 15 Jan 2022 16:03:51: #1 tag size = 50 INFO @ Sat, 15 Jan 2022 16:03:51: #1 total tags in treatment: 61016811 INFO @ Sat, 15 Jan 2022 16:03:51: #1 user defined the maximum tags... INFO @ Sat, 15 Jan 2022 16:03:51: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 15 Jan 2022 16:03:52: #1 tags after filtering in treatment: 61016781 INFO @ Sat, 15 Jan 2022 16:03:52: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 15 Jan 2022 16:03:52: #1 finished! INFO @ Sat, 15 Jan 2022 16:03:52: #2 Build Peak Model... INFO @ Sat, 15 Jan 2022 16:03:52: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 15 Jan 2022 16:03:54: 51000000 INFO @ Sat, 15 Jan 2022 16:03:55: 56000000 INFO @ Sat, 15 Jan 2022 16:03:57: #2 number of paired peaks: 6459 INFO @ Sat, 15 Jan 2022 16:03:57: start model_add_line... INFO @ Sat, 15 Jan 2022 16:03:57: start X-correlation... INFO @ Sat, 15 Jan 2022 16:03:57: end of X-cor INFO @ Sat, 15 Jan 2022 16:03:57: #2 finished! INFO @ Sat, 15 Jan 2022 16:03:57: #2 predicted fragment length is 49 bps INFO @ Sat, 15 Jan 2022 16:03:57: #2 alternative fragment length(s) may be 49,539 bps INFO @ Sat, 15 Jan 2022 16:03:57: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.05_model.r WARNING @ Sat, 15 Jan 2022 16:03:57: #2 Since the d (49) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 15 Jan 2022 16:03:57: #2 You may need to consider one of the other alternative d(s): 49,539 WARNING @ Sat, 15 Jan 2022 16:03:57: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 15 Jan 2022 16:03:57: #3 Call peaks... INFO @ Sat, 15 Jan 2022 16:03:57: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 15 Jan 2022 16:04:00: 52000000 INFO @ Sat, 15 Jan 2022 16:04:01: 57000000 INFO @ Sat, 15 Jan 2022 16:04:06: 53000000 INFO @ Sat, 15 Jan 2022 16:04:07: 58000000 INFO @ Sat, 15 Jan 2022 16:04:12: 54000000 INFO @ Sat, 15 Jan 2022 16:04:13: 59000000 INFO @ Sat, 15 Jan 2022 16:04:18: 55000000 INFO @ Sat, 15 Jan 2022 16:04:19: 60000000 INFO @ Sat, 15 Jan 2022 16:04:24: 56000000 INFO @ Sat, 15 Jan 2022 16:04:25: 61000000 INFO @ Sat, 15 Jan 2022 16:04:26: #1 tag size is determined as 50 bps INFO @ Sat, 15 Jan 2022 16:04:26: #1 tag size = 50 INFO @ Sat, 15 Jan 2022 16:04:26: #1 total tags in treatment: 61016811 INFO @ Sat, 15 Jan 2022 16:04:26: #1 user defined the maximum tags... INFO @ Sat, 15 Jan 2022 16:04:26: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 15 Jan 2022 16:04:27: #1 tags after filtering in treatment: 61016781 INFO @ Sat, 15 Jan 2022 16:04:27: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 15 Jan 2022 16:04:27: #1 finished! INFO @ Sat, 15 Jan 2022 16:04:27: #2 Build Peak Model... INFO @ Sat, 15 Jan 2022 16:04:27: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 15 Jan 2022 16:04:29: 57000000 INFO @ Sat, 15 Jan 2022 16:04:31: #2 number of paired peaks: 6459 INFO @ Sat, 15 Jan 2022 16:04:31: start model_add_line... INFO @ Sat, 15 Jan 2022 16:04:32: start X-correlation... INFO @ Sat, 15 Jan 2022 16:04:32: end of X-cor INFO @ Sat, 15 Jan 2022 16:04:32: #2 finished! INFO @ Sat, 15 Jan 2022 16:04:32: #2 predicted fragment length is 49 bps INFO @ Sat, 15 Jan 2022 16:04:32: #2 alternative fragment length(s) may be 49,539 bps INFO @ Sat, 15 Jan 2022 16:04:32: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.10_model.r WARNING @ Sat, 15 Jan 2022 16:04:32: #2 Since the d (49) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 15 Jan 2022 16:04:32: #2 You may need to consider one of the other alternative d(s): 49,539 WARNING @ Sat, 15 Jan 2022 16:04:32: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 15 Jan 2022 16:04:32: #3 Call peaks... INFO @ Sat, 15 Jan 2022 16:04:32: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 15 Jan 2022 16:04:35: 58000000 INFO @ Sat, 15 Jan 2022 16:04:40: 59000000 INFO @ Sat, 15 Jan 2022 16:04:46: 60000000 INFO @ Sat, 15 Jan 2022 16:04:51: 61000000 INFO @ Sat, 15 Jan 2022 16:04:52: #1 tag size is determined as 50 bps INFO @ Sat, 15 Jan 2022 16:04:52: #1 tag size = 50 INFO @ Sat, 15 Jan 2022 16:04:52: #1 total tags in treatment: 61016811 INFO @ Sat, 15 Jan 2022 16:04:52: #1 user defined the maximum tags... INFO @ Sat, 15 Jan 2022 16:04:52: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 15 Jan 2022 16:04:53: #1 tags after filtering in treatment: 61016781 INFO @ Sat, 15 Jan 2022 16:04:53: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 15 Jan 2022 16:04:53: #1 finished! INFO @ Sat, 15 Jan 2022 16:04:53: #2 Build Peak Model... INFO @ Sat, 15 Jan 2022 16:04:53: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 15 Jan 2022 16:04:58: #2 number of paired peaks: 6459 INFO @ Sat, 15 Jan 2022 16:04:58: start model_add_line... INFO @ Sat, 15 Jan 2022 16:04:58: start X-correlation... INFO @ Sat, 15 Jan 2022 16:04:58: end of X-cor INFO @ Sat, 15 Jan 2022 16:04:58: #2 finished! INFO @ Sat, 15 Jan 2022 16:04:58: #2 predicted fragment length is 49 bps INFO @ Sat, 15 Jan 2022 16:04:58: #2 alternative fragment length(s) may be 49,539 bps INFO @ Sat, 15 Jan 2022 16:04:58: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.20_model.r WARNING @ Sat, 15 Jan 2022 16:04:58: #2 Since the d (49) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 15 Jan 2022 16:04:58: #2 You may need to consider one of the other alternative d(s): 49,539 WARNING @ Sat, 15 Jan 2022 16:04:58: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 15 Jan 2022 16:04:58: #3 Call peaks... INFO @ Sat, 15 Jan 2022 16:04:58: #3 Pre-compute pvalue-qvalue table... BigWig に変換しました。 INFO @ Sat, 15 Jan 2022 16:06:06: #3 Call peaks for each chromosome... INFO @ Sat, 15 Jan 2022 16:06:38: #3 Call peaks for each chromosome... INFO @ Sat, 15 Jan 2022 16:07:07: #3 Call peaks for each chromosome... INFO @ Sat, 15 Jan 2022 16:07:12: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.05_peaks.xls INFO @ Sat, 15 Jan 2022 16:07:12: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.05_peaks.narrowPeak INFO @ Sat, 15 Jan 2022 16:07:12: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.05_summits.bed INFO @ Sat, 15 Jan 2022 16:07:12: Done! pass1 - making usageList (73 chroms): 1 millis pass2 - checking and writing primary data (3339 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Sat, 15 Jan 2022 16:07:44: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.10_peaks.xls INFO @ Sat, 15 Jan 2022 16:07:44: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.10_peaks.narrowPeak INFO @ Sat, 15 Jan 2022 16:07:44: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.10_summits.bed INFO @ Sat, 15 Jan 2022 16:07:44: Done! pass1 - making usageList (62 chroms): 1 millis pass2 - checking and writing primary data (1746 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Sat, 15 Jan 2022 16:08:12: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.20_peaks.xls INFO @ Sat, 15 Jan 2022 16:08:12: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.20_peaks.narrowPeak INFO @ Sat, 15 Jan 2022 16:08:12: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745134/ERX2745134.20_summits.bed INFO @ Sat, 15 Jan 2022 16:08:12: Done! pass1 - making usageList (42 chroms): 0 millis pass2 - checking and writing primary data (770 records, 4 fields): 4 millis CompletedMACS2peakCalling