Job ID = 14519513 SRX = ERX2745096 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... Read 100171587 spots for ERR2731871/ERR2731871.sra Written 100171587 spots for ERR2731871/ERR2731871.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:01 Multiseed full-index search: 01:45:41 100171587 reads; of these: 100171587 (100.00%) were unpaired; of these: 2815482 (2.81%) aligned 0 times 76510246 (76.38%) aligned exactly 1 time 20845859 (20.81%) aligned >1 times 97.19% overall alignment rate Time searching: 01:45:45 Overall time: 01:45:45 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 40 files... [bam_rmdupse_core] 29992944 / 97356105 = 0.3081 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 15 Jan 2022 17:41:27: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 15 Jan 2022 17:41:27: #1 read tag files... INFO @ Sat, 15 Jan 2022 17:41:27: #1 read treatment tags... INFO @ Sat, 15 Jan 2022 17:41:36: 1000000 INFO @ Sat, 15 Jan 2022 17:41:44: 2000000 INFO @ Sat, 15 Jan 2022 17:41:53: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 15 Jan 2022 17:41:57: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 15 Jan 2022 17:41:57: #1 read tag files... INFO @ Sat, 15 Jan 2022 17:41:57: #1 read treatment tags... INFO @ Sat, 15 Jan 2022 17:42:01: 4000000 INFO @ Sat, 15 Jan 2022 17:42:08: 1000000 INFO @ Sat, 15 Jan 2022 17:42:10: 5000000 INFO @ Sat, 15 Jan 2022 17:42:18: 2000000 INFO @ Sat, 15 Jan 2022 17:42:19: 6000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 15 Jan 2022 17:42:27: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 15 Jan 2022 17:42:27: #1 read tag files... INFO @ Sat, 15 Jan 2022 17:42:27: #1 read treatment tags... INFO @ Sat, 15 Jan 2022 17:42:27: 7000000 INFO @ Sat, 15 Jan 2022 17:42:29: 3000000 INFO @ Sat, 15 Jan 2022 17:42:36: 1000000 INFO @ Sat, 15 Jan 2022 17:42:36: 8000000 INFO @ Sat, 15 Jan 2022 17:42:40: 4000000 INFO @ Sat, 15 Jan 2022 17:42:44: 2000000 INFO @ Sat, 15 Jan 2022 17:42:45: 9000000 INFO @ Sat, 15 Jan 2022 17:42:51: 5000000 INFO @ Sat, 15 Jan 2022 17:42:52: 3000000 INFO @ Sat, 15 Jan 2022 17:42:54: 10000000 INFO @ Sat, 15 Jan 2022 17:43:01: 4000000 INFO @ Sat, 15 Jan 2022 17:43:02: 6000000 INFO @ Sat, 15 Jan 2022 17:43:04: 11000000 INFO @ Sat, 15 Jan 2022 17:43:09: 5000000 INFO @ Sat, 15 Jan 2022 17:43:13: 7000000 INFO @ Sat, 15 Jan 2022 17:43:14: 12000000 INFO @ Sat, 15 Jan 2022 17:43:17: 6000000 INFO @ Sat, 15 Jan 2022 17:43:24: 8000000 INFO @ Sat, 15 Jan 2022 17:43:24: 13000000 INFO @ Sat, 15 Jan 2022 17:43:24: 7000000 INFO @ Sat, 15 Jan 2022 17:43:32: 8000000 INFO @ Sat, 15 Jan 2022 17:43:34: 14000000 INFO @ Sat, 15 Jan 2022 17:43:34: 9000000 INFO @ Sat, 15 Jan 2022 17:43:40: 9000000 INFO @ Sat, 15 Jan 2022 17:43:44: 15000000 INFO @ Sat, 15 Jan 2022 17:43:45: 10000000 INFO @ Sat, 15 Jan 2022 17:43:48: 10000000 INFO @ Sat, 15 Jan 2022 17:43:54: 16000000 INFO @ Sat, 15 Jan 2022 17:43:55: 11000000 INFO @ Sat, 15 Jan 2022 17:43:57: 11000000 INFO @ Sat, 15 Jan 2022 17:44:04: 17000000 INFO @ Sat, 15 Jan 2022 17:44:05: 12000000 INFO @ Sat, 15 Jan 2022 17:44:06: 12000000 INFO @ Sat, 15 Jan 2022 17:44:14: 18000000 INFO @ Sat, 15 Jan 2022 17:44:16: 13000000 INFO @ Sat, 15 Jan 2022 17:44:16: 13000000 INFO @ Sat, 15 Jan 2022 17:44:23: 19000000 INFO @ Sat, 15 Jan 2022 17:44:26: 14000000 INFO @ Sat, 15 Jan 2022 17:44:27: 14000000 INFO @ Sat, 15 Jan 2022 17:44:32: 20000000 INFO @ Sat, 15 Jan 2022 17:44:35: 15000000 INFO @ Sat, 15 Jan 2022 17:44:38: 15000000 INFO @ Sat, 15 Jan 2022 17:44:42: 21000000 INFO @ Sat, 15 Jan 2022 17:44:44: 16000000 INFO @ Sat, 15 Jan 2022 17:44:49: 16000000 INFO @ Sat, 15 Jan 2022 17:44:51: 22000000 INFO @ Sat, 15 Jan 2022 17:44:54: 17000000 INFO @ Sat, 15 Jan 2022 17:44:59: 17000000 INFO @ Sat, 15 Jan 2022 17:45:01: 23000000 INFO @ Sat, 15 Jan 2022 17:45:02: 18000000 INFO @ Sat, 15 Jan 2022 17:45:10: 18000000 INFO @ Sat, 15 Jan 2022 17:45:11: 24000000 INFO @ Sat, 15 Jan 2022 17:45:11: 19000000 INFO @ Sat, 15 Jan 2022 17:45:20: 25000000 INFO @ Sat, 15 Jan 2022 17:45:20: 20000000 INFO @ Sat, 15 Jan 2022 17:45:21: 19000000 INFO @ Sat, 15 Jan 2022 17:45:29: 21000000 INFO @ Sat, 15 Jan 2022 17:45:30: 26000000 INFO @ Sat, 15 Jan 2022 17:45:32: 20000000 INFO @ Sat, 15 Jan 2022 17:45:39: 22000000 INFO @ Sat, 15 Jan 2022 17:45:40: 27000000 INFO @ Sat, 15 Jan 2022 17:45:43: 21000000 INFO @ Sat, 15 Jan 2022 17:45:48: 23000000 INFO @ Sat, 15 Jan 2022 17:45:51: 28000000 INFO @ Sat, 15 Jan 2022 17:45:53: 22000000 INFO @ Sat, 15 Jan 2022 17:45:57: 24000000 INFO @ Sat, 15 Jan 2022 17:46:01: 29000000 INFO @ Sat, 15 Jan 2022 17:46:04: 23000000 INFO @ Sat, 15 Jan 2022 17:46:06: 25000000 INFO @ Sat, 15 Jan 2022 17:46:11: 30000000 INFO @ Sat, 15 Jan 2022 17:46:15: 26000000 INFO @ Sat, 15 Jan 2022 17:46:15: 24000000 INFO @ Sat, 15 Jan 2022 17:46:20: 31000000 INFO @ Sat, 15 Jan 2022 17:46:24: 27000000 INFO @ Sat, 15 Jan 2022 17:46:26: 25000000 INFO @ Sat, 15 Jan 2022 17:46:30: 32000000 INFO @ Sat, 15 Jan 2022 17:46:33: 28000000 INFO @ Sat, 15 Jan 2022 17:46:36: 26000000 INFO @ Sat, 15 Jan 2022 17:46:39: 33000000 INFO @ Sat, 15 Jan 2022 17:46:42: 29000000 INFO @ Sat, 15 Jan 2022 17:46:47: 27000000 INFO @ Sat, 15 Jan 2022 17:46:49: 34000000 INFO @ Sat, 15 Jan 2022 17:46:51: 30000000 INFO @ Sat, 15 Jan 2022 17:46:58: 28000000 INFO @ Sat, 15 Jan 2022 17:46:59: 35000000 INFO @ Sat, 15 Jan 2022 17:47:00: 31000000 INFO @ Sat, 15 Jan 2022 17:47:09: 36000000 INFO @ Sat, 15 Jan 2022 17:47:09: 29000000 INFO @ Sat, 15 Jan 2022 17:47:10: 32000000 INFO @ Sat, 15 Jan 2022 17:47:19: 37000000 INFO @ Sat, 15 Jan 2022 17:47:19: 33000000 INFO @ Sat, 15 Jan 2022 17:47:20: 30000000 INFO @ Sat, 15 Jan 2022 17:47:28: 34000000 INFO @ Sat, 15 Jan 2022 17:47:29: 38000000 INFO @ Sat, 15 Jan 2022 17:47:30: 31000000 INFO @ Sat, 15 Jan 2022 17:47:37: 35000000 INFO @ Sat, 15 Jan 2022 17:47:39: 39000000 INFO @ Sat, 15 Jan 2022 17:47:40: 32000000 INFO @ Sat, 15 Jan 2022 17:47:45: 36000000 INFO @ Sat, 15 Jan 2022 17:47:49: 40000000 INFO @ Sat, 15 Jan 2022 17:47:51: 33000000 INFO @ Sat, 15 Jan 2022 17:47:53: 37000000 INFO @ Sat, 15 Jan 2022 17:47:58: 41000000 INFO @ Sat, 15 Jan 2022 17:48:02: 38000000 INFO @ Sat, 15 Jan 2022 17:48:03: 34000000 INFO @ Sat, 15 Jan 2022 17:48:08: 42000000 INFO @ Sat, 15 Jan 2022 17:48:11: 39000000 INFO @ Sat, 15 Jan 2022 17:48:14: 35000000 INFO @ Sat, 15 Jan 2022 17:48:17: 43000000 INFO @ Sat, 15 Jan 2022 17:48:19: 40000000 INFO @ Sat, 15 Jan 2022 17:48:25: 36000000 INFO @ Sat, 15 Jan 2022 17:48:26: 44000000 INFO @ Sat, 15 Jan 2022 17:48:28: 41000000 INFO @ Sat, 15 Jan 2022 17:48:36: 45000000 INFO @ Sat, 15 Jan 2022 17:48:36: 42000000 INFO @ Sat, 15 Jan 2022 17:48:37: 37000000 INFO @ Sat, 15 Jan 2022 17:48:45: 43000000 INFO @ Sat, 15 Jan 2022 17:48:46: 46000000 INFO @ Sat, 15 Jan 2022 17:48:48: 38000000 INFO @ Sat, 15 Jan 2022 17:48:54: 44000000 INFO @ Sat, 15 Jan 2022 17:48:55: 47000000 INFO @ Sat, 15 Jan 2022 17:48:59: 39000000 INFO @ Sat, 15 Jan 2022 17:49:02: 45000000 INFO @ Sat, 15 Jan 2022 17:49:05: 48000000 INFO @ Sat, 15 Jan 2022 17:49:10: 40000000 INFO @ Sat, 15 Jan 2022 17:49:11: 46000000 INFO @ Sat, 15 Jan 2022 17:49:14: 49000000 INFO @ Sat, 15 Jan 2022 17:49:20: 47000000 INFO @ Sat, 15 Jan 2022 17:49:21: 41000000 INFO @ Sat, 15 Jan 2022 17:49:23: 50000000 INFO @ Sat, 15 Jan 2022 17:49:29: 48000000 INFO @ Sat, 15 Jan 2022 17:49:32: 42000000 INFO @ Sat, 15 Jan 2022 17:49:32: 51000000 INFO @ Sat, 15 Jan 2022 17:49:38: 49000000 INFO @ Sat, 15 Jan 2022 17:49:41: 52000000 INFO @ Sat, 15 Jan 2022 17:49:42: 43000000 INFO @ Sat, 15 Jan 2022 17:49:46: 50000000 INFO @ Sat, 15 Jan 2022 17:49:50: 53000000 INFO @ Sat, 15 Jan 2022 17:49:53: 44000000 INFO @ Sat, 15 Jan 2022 17:49:55: 51000000 INFO @ Sat, 15 Jan 2022 17:50:00: 54000000 INFO @ Sat, 15 Jan 2022 17:50:04: 52000000 INFO @ Sat, 15 Jan 2022 17:50:05: 45000000 INFO @ Sat, 15 Jan 2022 17:50:09: 55000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 15 Jan 2022 17:50:12: 53000000 INFO @ Sat, 15 Jan 2022 17:50:15: 46000000 INFO @ Sat, 15 Jan 2022 17:50:18: 56000000 INFO @ Sat, 15 Jan 2022 17:50:21: 54000000 INFO @ Sat, 15 Jan 2022 17:50:26: 47000000 INFO @ Sat, 15 Jan 2022 17:50:27: 57000000 INFO @ Sat, 15 Jan 2022 17:50:30: 55000000 INFO @ Sat, 15 Jan 2022 17:50:35: 58000000 INFO @ Sat, 15 Jan 2022 17:50:37: 48000000 INFO @ Sat, 15 Jan 2022 17:50:38: 56000000 INFO @ Sat, 15 Jan 2022 17:50:44: 59000000 INFO @ Sat, 15 Jan 2022 17:50:47: 57000000 INFO @ Sat, 15 Jan 2022 17:50:48: 49000000 INFO @ Sat, 15 Jan 2022 17:50:52: 60000000 INFO @ Sat, 15 Jan 2022 17:50:54: 58000000 INFO @ Sat, 15 Jan 2022 17:50:58: 50000000 INFO @ Sat, 15 Jan 2022 17:51:00: 61000000 INFO @ Sat, 15 Jan 2022 17:51:02: 59000000 INFO @ Sat, 15 Jan 2022 17:51:08: 62000000 INFO @ Sat, 15 Jan 2022 17:51:09: 51000000 INFO @ Sat, 15 Jan 2022 17:51:10: 60000000 INFO @ Sat, 15 Jan 2022 17:51:17: 63000000 INFO @ Sat, 15 Jan 2022 17:51:17: 61000000 INFO @ Sat, 15 Jan 2022 17:51:19: 52000000 INFO @ Sat, 15 Jan 2022 17:51:25: 64000000 INFO @ Sat, 15 Jan 2022 17:51:25: 62000000 INFO @ Sat, 15 Jan 2022 17:51:29: 53000000 INFO @ Sat, 15 Jan 2022 17:51:33: 63000000 INFO @ Sat, 15 Jan 2022 17:51:33: 65000000 INFO @ Sat, 15 Jan 2022 17:51:39: 54000000 INFO @ Sat, 15 Jan 2022 17:51:41: 64000000 INFO @ Sat, 15 Jan 2022 17:51:42: 66000000 INFO @ Sat, 15 Jan 2022 17:51:49: 65000000 INFO @ Sat, 15 Jan 2022 17:51:49: 55000000 INFO @ Sat, 15 Jan 2022 17:51:51: 67000000 INFO @ Sat, 15 Jan 2022 17:51:54: #1 tag size is determined as 50 bps INFO @ Sat, 15 Jan 2022 17:51:54: #1 tag size = 50 INFO @ Sat, 15 Jan 2022 17:51:54: #1 total tags in treatment: 67363161 INFO @ Sat, 15 Jan 2022 17:51:54: #1 user defined the maximum tags... INFO @ Sat, 15 Jan 2022 17:51:54: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 15 Jan 2022 17:51:56: #1 tags after filtering in treatment: 67363109 INFO @ Sat, 15 Jan 2022 17:51:56: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 15 Jan 2022 17:51:56: #1 finished! INFO @ Sat, 15 Jan 2022 17:51:56: #2 Build Peak Model... INFO @ Sat, 15 Jan 2022 17:51:56: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 15 Jan 2022 17:51:57: 66000000 INFO @ Sat, 15 Jan 2022 17:52:00: 56000000 INFO @ Sat, 15 Jan 2022 17:52:06: 67000000 INFO @ Sat, 15 Jan 2022 17:52:07: #2 number of paired peaks: 79226 INFO @ Sat, 15 Jan 2022 17:52:07: start model_add_line... INFO @ Sat, 15 Jan 2022 17:52:09: start X-correlation... INFO @ Sat, 15 Jan 2022 17:52:09: end of X-cor INFO @ Sat, 15 Jan 2022 17:52:09: #2 finished! INFO @ Sat, 15 Jan 2022 17:52:09: #2 predicted fragment length is 209 bps INFO @ Sat, 15 Jan 2022 17:52:09: #2 alternative fragment length(s) may be 209 bps INFO @ Sat, 15 Jan 2022 17:52:09: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.05_model.r INFO @ Sat, 15 Jan 2022 17:52:09: #3 Call peaks... INFO @ Sat, 15 Jan 2022 17:52:09: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 15 Jan 2022 17:52:10: #1 tag size is determined as 50 bps INFO @ Sat, 15 Jan 2022 17:52:10: #1 tag size = 50 INFO @ Sat, 15 Jan 2022 17:52:10: #1 total tags in treatment: 67363161 INFO @ Sat, 15 Jan 2022 17:52:10: #1 user defined the maximum tags... INFO @ Sat, 15 Jan 2022 17:52:10: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 15 Jan 2022 17:52:10: 57000000 INFO @ Sat, 15 Jan 2022 17:52:11: #1 tags after filtering in treatment: 67363109 INFO @ Sat, 15 Jan 2022 17:52:11: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 15 Jan 2022 17:52:11: #1 finished! INFO @ Sat, 15 Jan 2022 17:52:11: #2 Build Peak Model... INFO @ Sat, 15 Jan 2022 17:52:11: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 15 Jan 2022 17:52:19: 58000000 INFO @ Sat, 15 Jan 2022 17:52:23: #2 number of paired peaks: 79226 INFO @ Sat, 15 Jan 2022 17:52:23: start model_add_line... INFO @ Sat, 15 Jan 2022 17:52:24: start X-correlation... INFO @ Sat, 15 Jan 2022 17:52:24: end of X-cor INFO @ Sat, 15 Jan 2022 17:52:24: #2 finished! INFO @ Sat, 15 Jan 2022 17:52:24: #2 predicted fragment length is 209 bps INFO @ Sat, 15 Jan 2022 17:52:24: #2 alternative fragment length(s) may be 209 bps INFO @ Sat, 15 Jan 2022 17:52:24: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.20_model.r INFO @ Sat, 15 Jan 2022 17:52:24: #3 Call peaks... INFO @ Sat, 15 Jan 2022 17:52:24: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 15 Jan 2022 17:52:29: 59000000 INFO @ Sat, 15 Jan 2022 17:52:39: 60000000 INFO @ Sat, 15 Jan 2022 17:52:49: 61000000 INFO @ Sat, 15 Jan 2022 17:52:59: 62000000 INFO @ Sat, 15 Jan 2022 17:53:09: 63000000 INFO @ Sat, 15 Jan 2022 17:53:19: 64000000 INFO @ Sat, 15 Jan 2022 17:53:29: 65000000 INFO @ Sat, 15 Jan 2022 17:53:39: 66000000 INFO @ Sat, 15 Jan 2022 17:53:50: 67000000 BigWig に変換しました。 INFO @ Sat, 15 Jan 2022 17:53:54: #1 tag size is determined as 50 bps INFO @ Sat, 15 Jan 2022 17:53:54: #1 tag size = 50 INFO @ Sat, 15 Jan 2022 17:53:54: #1 total tags in treatment: 67363161 INFO @ Sat, 15 Jan 2022 17:53:54: #1 user defined the maximum tags... INFO @ Sat, 15 Jan 2022 17:53:54: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 15 Jan 2022 17:53:56: #1 tags after filtering in treatment: 67363109 INFO @ Sat, 15 Jan 2022 17:53:56: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 15 Jan 2022 17:53:56: #1 finished! INFO @ Sat, 15 Jan 2022 17:53:56: #2 Build Peak Model... INFO @ Sat, 15 Jan 2022 17:53:56: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 15 Jan 2022 17:54:07: #2 number of paired peaks: 79226 INFO @ Sat, 15 Jan 2022 17:54:07: start model_add_line... INFO @ Sat, 15 Jan 2022 17:54:08: start X-correlation... INFO @ Sat, 15 Jan 2022 17:54:08: end of X-cor INFO @ Sat, 15 Jan 2022 17:54:08: #2 finished! INFO @ Sat, 15 Jan 2022 17:54:08: #2 predicted fragment length is 209 bps INFO @ Sat, 15 Jan 2022 17:54:08: #2 alternative fragment length(s) may be 209 bps INFO @ Sat, 15 Jan 2022 17:54:08: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.10_model.r INFO @ Sat, 15 Jan 2022 17:54:08: #3 Call peaks... INFO @ Sat, 15 Jan 2022 17:54:08: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 15 Jan 2022 17:55:53: #3 Call peaks for each chromosome... INFO @ Sat, 15 Jan 2022 17:56:11: #3 Call peaks for each chromosome... INFO @ Sat, 15 Jan 2022 17:57:51: #3 Call peaks for each chromosome... INFO @ Sat, 15 Jan 2022 17:57:54: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.05_peaks.xls INFO @ Sat, 15 Jan 2022 17:57:55: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.05_peaks.narrowPeak INFO @ Sat, 15 Jan 2022 17:57:55: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.05_summits.bed INFO @ Sat, 15 Jan 2022 17:57:55: Done! pass1 - making usageList (144 chroms): 13 millis pass2 - checking and writing primary data (44080 records, 4 fields): 65 millis CompletedMACS2peakCalling INFO @ Sat, 15 Jan 2022 17:58:14: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.20_peaks.xls INFO @ Sat, 15 Jan 2022 17:58:14: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.20_peaks.narrowPeak INFO @ Sat, 15 Jan 2022 17:58:14: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.20_summits.bed INFO @ Sat, 15 Jan 2022 17:58:14: Done! pass1 - making usageList (102 chroms): 7 millis pass2 - checking and writing primary data (17364 records, 4 fields): 33 millis CompletedMACS2peakCalling INFO @ Sat, 15 Jan 2022 17:59:51: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.10_peaks.xls INFO @ Sat, 15 Jan 2022 17:59:51: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.10_peaks.narrowPeak INFO @ Sat, 15 Jan 2022 17:59:52: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745096/ERX2745096.10_summits.bed INFO @ Sat, 15 Jan 2022 17:59:52: Done! pass1 - making usageList (123 chroms): 9 millis pass2 - checking and writing primary data (29500 records, 4 fields): 43 millis CompletedMACS2peakCalling