Job ID = 2001627 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-07-04T21:38:20 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T21:42:53 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T21:42:53 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T21:55:53 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:00:53 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:05:14 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:05:54 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:06:16 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:07:22 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:07:59 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:11:37 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:11:45 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:11:54 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:12:27 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:12:36 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:12:39 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:13:41 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:36:49 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:36:49 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:39:12 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:42:41 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T23:10:16 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 186,163,958 reads read : 186,163,958 reads written : 186,163,958 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:53:45 186163958 reads; of these: 186163958 (100.00%) were unpaired; of these: 28121998 (15.11%) aligned 0 times 115696005 (62.15%) aligned exactly 1 time 42345955 (22.75%) aligned >1 times 84.89% overall alignment rate Time searching: 01:53:46 Overall time: 01:53:46 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 68 files... [bam_rmdupse_core] 21975750 / 158041960 = 0.1391 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 11:24:58: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 11:24:58: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 11:24:58: #1 read tag files... INFO @ Fri, 05 Jul 2019 11:24:58: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 11:24:58: #1 read tag files... INFO @ Fri, 05 Jul 2019 11:24:58: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 11:24:59: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 11:24:59: #1 read tag files... INFO @ Fri, 05 Jul 2019 11:24:59: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 11:25:06: 1000000 INFO @ Fri, 05 Jul 2019 11:25:09: 1000000 INFO @ Fri, 05 Jul 2019 11:25:09: 1000000 INFO @ Fri, 05 Jul 2019 11:25:14: 2000000 INFO @ Fri, 05 Jul 2019 11:25:20: 2000000 INFO @ Fri, 05 Jul 2019 11:25:20: 2000000 INFO @ Fri, 05 Jul 2019 11:25:21: 3000000 INFO @ Fri, 05 Jul 2019 11:25:29: 4000000 INFO @ Fri, 05 Jul 2019 11:25:30: 3000000 INFO @ Fri, 05 Jul 2019 11:25:30: 3000000 INFO @ Fri, 05 Jul 2019 11:25:36: 5000000 INFO @ Fri, 05 Jul 2019 11:25:40: 4000000 INFO @ Fri, 05 Jul 2019 11:25:40: 4000000 INFO @ Fri, 05 Jul 2019 11:25:44: 6000000 INFO @ Fri, 05 Jul 2019 11:25:51: 5000000 INFO @ Fri, 05 Jul 2019 11:25:51: 5000000 INFO @ Fri, 05 Jul 2019 11:25:51: 7000000 INFO @ Fri, 05 Jul 2019 11:25:59: 8000000 INFO @ Fri, 05 Jul 2019 11:26:01: 6000000 INFO @ Fri, 05 Jul 2019 11:26:01: 6000000 INFO @ Fri, 05 Jul 2019 11:26:06: 9000000 INFO @ Fri, 05 Jul 2019 11:26:11: 7000000 INFO @ Fri, 05 Jul 2019 11:26:11: 7000000 INFO @ Fri, 05 Jul 2019 11:26:14: 10000000 INFO @ Fri, 05 Jul 2019 11:26:21: 8000000 INFO @ Fri, 05 Jul 2019 11:26:21: 11000000 INFO @ Fri, 05 Jul 2019 11:26:21: 8000000 INFO @ Fri, 05 Jul 2019 11:26:29: 12000000 INFO @ Fri, 05 Jul 2019 11:26:31: 9000000 INFO @ Fri, 05 Jul 2019 11:26:31: 9000000 INFO @ Fri, 05 Jul 2019 11:26:36: 13000000 INFO @ Fri, 05 Jul 2019 11:26:41: 10000000 INFO @ Fri, 05 Jul 2019 11:26:41: 10000000 INFO @ Fri, 05 Jul 2019 11:26:44: 14000000 INFO @ Fri, 05 Jul 2019 11:26:51: 15000000 INFO @ Fri, 05 Jul 2019 11:26:52: 11000000 INFO @ Fri, 05 Jul 2019 11:26:52: 11000000 INFO @ Fri, 05 Jul 2019 11:26:59: 16000000 INFO @ Fri, 05 Jul 2019 11:27:02: 12000000 INFO @ Fri, 05 Jul 2019 11:27:03: 12000000 INFO @ Fri, 05 Jul 2019 11:27:06: 17000000 INFO @ Fri, 05 Jul 2019 11:27:13: 13000000 INFO @ Fri, 05 Jul 2019 11:27:13: 18000000 INFO @ Fri, 05 Jul 2019 11:27:14: 13000000 INFO @ Fri, 05 Jul 2019 11:27:21: 19000000 INFO @ Fri, 05 Jul 2019 11:27:24: 14000000 INFO @ Fri, 05 Jul 2019 11:27:25: 14000000 INFO @ Fri, 05 Jul 2019 11:27:28: 20000000 INFO @ Fri, 05 Jul 2019 11:27:34: 15000000 INFO @ Fri, 05 Jul 2019 11:27:35: 15000000 INFO @ Fri, 05 Jul 2019 11:27:35: 21000000 INFO @ Fri, 05 Jul 2019 11:27:43: 22000000 INFO @ Fri, 05 Jul 2019 11:27:44: 16000000 INFO @ Fri, 05 Jul 2019 11:27:44: 16000000 INFO @ Fri, 05 Jul 2019 11:27:50: 23000000 INFO @ Fri, 05 Jul 2019 11:27:54: 17000000 INFO @ Fri, 05 Jul 2019 11:27:54: 17000000 INFO @ Fri, 05 Jul 2019 11:27:58: 24000000 INFO @ Fri, 05 Jul 2019 11:28:03: 18000000 INFO @ Fri, 05 Jul 2019 11:28:04: 18000000 INFO @ Fri, 05 Jul 2019 11:28:05: 25000000 INFO @ Fri, 05 Jul 2019 11:28:12: 26000000 INFO @ Fri, 05 Jul 2019 11:28:13: 19000000 INFO @ Fri, 05 Jul 2019 11:28:14: 19000000 INFO @ Fri, 05 Jul 2019 11:28:20: 27000000 INFO @ Fri, 05 Jul 2019 11:28:23: 20000000 INFO @ Fri, 05 Jul 2019 11:28:24: 20000000 INFO @ Fri, 05 Jul 2019 11:28:27: 28000000 INFO @ Fri, 05 Jul 2019 11:28:33: 21000000 INFO @ Fri, 05 Jul 2019 11:28:34: 21000000 INFO @ Fri, 05 Jul 2019 11:28:34: 29000000 INFO @ Fri, 05 Jul 2019 11:28:42: 30000000 INFO @ Fri, 05 Jul 2019 11:28:42: 22000000 INFO @ Fri, 05 Jul 2019 11:28:44: 22000000 INFO @ Fri, 05 Jul 2019 11:28:49: 31000000 INFO @ Fri, 05 Jul 2019 11:28:52: 23000000 INFO @ Fri, 05 Jul 2019 11:28:56: 32000000 INFO @ Fri, 05 Jul 2019 11:28:57: 23000000 INFO @ Fri, 05 Jul 2019 11:29:02: 24000000 INFO @ Fri, 05 Jul 2019 11:29:04: 33000000 INFO @ Fri, 05 Jul 2019 11:29:07: 24000000 INFO @ Fri, 05 Jul 2019 11:29:11: 34000000 INFO @ Fri, 05 Jul 2019 11:29:12: 25000000 INFO @ Fri, 05 Jul 2019 11:29:17: 25000000 INFO @ Fri, 05 Jul 2019 11:29:19: 35000000 INFO @ Fri, 05 Jul 2019 11:29:22: 26000000 INFO @ Fri, 05 Jul 2019 11:29:27: 36000000 INFO @ Fri, 05 Jul 2019 11:29:27: 26000000 INFO @ Fri, 05 Jul 2019 11:29:31: 27000000 INFO @ Fri, 05 Jul 2019 11:29:34: 37000000 INFO @ Fri, 05 Jul 2019 11:29:37: 27000000 INFO @ Fri, 05 Jul 2019 11:29:41: 28000000 INFO @ Fri, 05 Jul 2019 11:29:42: 38000000 INFO @ Fri, 05 Jul 2019 11:29:47: 28000000 INFO @ Fri, 05 Jul 2019 11:29:49: 39000000 INFO @ Fri, 05 Jul 2019 11:29:51: 29000000 INFO @ Fri, 05 Jul 2019 11:29:56: 40000000 INFO @ Fri, 05 Jul 2019 11:29:57: 29000000 INFO @ Fri, 05 Jul 2019 11:30:01: 30000000 INFO @ Fri, 05 Jul 2019 11:30:04: 41000000 INFO @ Fri, 05 Jul 2019 11:30:07: 30000000 INFO @ Fri, 05 Jul 2019 11:30:10: 31000000 INFO @ Fri, 05 Jul 2019 11:30:11: 42000000 INFO @ Fri, 05 Jul 2019 11:30:16: 31000000 INFO @ Fri, 05 Jul 2019 11:30:18: 43000000 INFO @ Fri, 05 Jul 2019 11:30:20: 32000000 INFO @ Fri, 05 Jul 2019 11:30:26: 44000000 INFO @ Fri, 05 Jul 2019 11:30:26: 32000000 INFO @ Fri, 05 Jul 2019 11:30:30: 33000000 INFO @ Fri, 05 Jul 2019 11:30:33: 45000000 INFO @ Fri, 05 Jul 2019 11:30:36: 33000000 INFO @ Fri, 05 Jul 2019 11:30:40: 46000000 INFO @ Fri, 05 Jul 2019 11:30:41: 34000000 INFO @ Fri, 05 Jul 2019 11:30:46: 34000000 INFO @ Fri, 05 Jul 2019 11:30:48: 47000000 INFO @ Fri, 05 Jul 2019 11:30:51: 35000000 INFO @ Fri, 05 Jul 2019 11:30:55: 48000000 INFO @ Fri, 05 Jul 2019 11:30:56: 35000000 INFO @ Fri, 05 Jul 2019 11:31:02: 49000000 INFO @ Fri, 05 Jul 2019 11:31:02: 36000000 INFO @ Fri, 05 Jul 2019 11:31:07: 36000000 INFO @ Fri, 05 Jul 2019 11:31:10: 50000000 INFO @ Fri, 05 Jul 2019 11:31:13: 37000000 INFO @ Fri, 05 Jul 2019 11:31:17: 51000000 INFO @ Fri, 05 Jul 2019 11:31:18: 37000000 INFO @ Fri, 05 Jul 2019 11:31:24: 38000000 INFO @ Fri, 05 Jul 2019 11:31:24: 52000000 INFO @ Fri, 05 Jul 2019 11:31:28: 38000000 INFO @ Fri, 05 Jul 2019 11:31:31: 53000000 INFO @ Fri, 05 Jul 2019 11:31:34: 39000000 INFO @ Fri, 05 Jul 2019 11:31:38: 39000000 INFO @ Fri, 05 Jul 2019 11:31:39: 54000000 INFO @ Fri, 05 Jul 2019 11:31:44: 40000000 INFO @ Fri, 05 Jul 2019 11:31:46: 55000000 INFO @ Fri, 05 Jul 2019 11:31:47: 40000000 INFO @ Fri, 05 Jul 2019 11:31:53: 41000000 INFO @ Fri, 05 Jul 2019 11:31:53: 56000000 INFO @ Fri, 05 Jul 2019 11:31:56: 41000000 INFO @ Fri, 05 Jul 2019 11:32:00: 57000000 INFO @ Fri, 05 Jul 2019 11:32:02: 42000000 INFO @ Fri, 05 Jul 2019 11:32:04: 42000000 INFO @ Fri, 05 Jul 2019 11:32:08: 58000000 INFO @ Fri, 05 Jul 2019 11:32:11: 43000000 INFO @ Fri, 05 Jul 2019 11:32:12: 43000000 INFO @ Fri, 05 Jul 2019 11:32:15: 59000000 INFO @ Fri, 05 Jul 2019 11:32:20: 44000000 INFO @ Fri, 05 Jul 2019 11:32:20: 44000000 INFO @ Fri, 05 Jul 2019 11:32:22: 60000000 INFO @ Fri, 05 Jul 2019 11:32:27: 45000000 INFO @ Fri, 05 Jul 2019 11:32:29: 61000000 INFO @ Fri, 05 Jul 2019 11:32:30: 45000000 INFO @ Fri, 05 Jul 2019 11:32:35: 46000000 INFO @ Fri, 05 Jul 2019 11:32:37: 62000000 INFO @ Fri, 05 Jul 2019 11:32:39: 46000000 INFO @ Fri, 05 Jul 2019 11:32:43: 47000000 INFO @ Fri, 05 Jul 2019 11:32:44: 63000000 INFO @ Fri, 05 Jul 2019 11:32:48: 47000000 INFO @ Fri, 05 Jul 2019 11:32:51: 48000000 INFO @ Fri, 05 Jul 2019 11:32:51: 64000000 INFO @ Fri, 05 Jul 2019 11:32:57: 48000000 INFO @ Fri, 05 Jul 2019 11:32:59: 65000000 INFO @ Fri, 05 Jul 2019 11:32:59: 49000000 INFO @ Fri, 05 Jul 2019 11:33:06: 66000000 INFO @ Fri, 05 Jul 2019 11:33:06: 49000000 INFO @ Fri, 05 Jul 2019 11:33:07: 50000000 INFO @ Fri, 05 Jul 2019 11:33:13: 67000000 INFO @ Fri, 05 Jul 2019 11:33:15: 51000000 INFO @ Fri, 05 Jul 2019 11:33:15: 50000000 INFO @ Fri, 05 Jul 2019 11:33:21: 68000000 INFO @ Fri, 05 Jul 2019 11:33:22: 52000000 INFO @ Fri, 05 Jul 2019 11:33:24: 51000000 INFO @ Fri, 05 Jul 2019 11:33:28: 69000000 INFO @ Fri, 05 Jul 2019 11:33:30: 53000000 INFO @ Fri, 05 Jul 2019 11:33:34: 52000000 INFO @ Fri, 05 Jul 2019 11:33:35: 70000000 INFO @ Fri, 05 Jul 2019 11:33:38: 54000000 INFO @ Fri, 05 Jul 2019 11:33:42: 71000000 INFO @ Fri, 05 Jul 2019 11:33:43: 53000000 INFO @ Fri, 05 Jul 2019 11:33:46: 55000000 INFO @ Fri, 05 Jul 2019 11:33:50: 72000000 INFO @ Fri, 05 Jul 2019 11:33:52: 54000000 INFO @ Fri, 05 Jul 2019 11:33:54: 56000000 INFO @ Fri, 05 Jul 2019 11:33:57: 73000000 INFO @ Fri, 05 Jul 2019 11:34:01: 55000000 INFO @ Fri, 05 Jul 2019 11:34:02: 57000000 INFO @ Fri, 05 Jul 2019 11:34:04: 74000000 INFO @ Fri, 05 Jul 2019 11:34:10: 58000000 INFO @ Fri, 05 Jul 2019 11:34:12: 56000000 INFO @ Fri, 05 Jul 2019 11:34:12: 75000000 INFO @ Fri, 05 Jul 2019 11:34:18: 59000000 INFO @ Fri, 05 Jul 2019 11:34:19: 76000000 INFO @ Fri, 05 Jul 2019 11:34:21: 57000000 INFO @ Fri, 05 Jul 2019 11:34:26: 60000000 INFO @ Fri, 05 Jul 2019 11:34:26: 77000000 INFO @ Fri, 05 Jul 2019 11:34:30: 58000000 INFO @ Fri, 05 Jul 2019 11:34:33: 78000000 INFO @ Fri, 05 Jul 2019 11:34:34: 61000000 INFO @ Fri, 05 Jul 2019 11:34:39: 59000000 INFO @ Fri, 05 Jul 2019 11:34:41: 79000000 INFO @ Fri, 05 Jul 2019 11:34:42: 62000000 INFO @ Fri, 05 Jul 2019 11:34:48: 60000000 INFO @ Fri, 05 Jul 2019 11:34:48: 80000000 INFO @ Fri, 05 Jul 2019 11:34:49: 63000000 INFO @ Fri, 05 Jul 2019 11:34:55: 81000000 INFO @ Fri, 05 Jul 2019 11:34:57: 61000000 INFO @ Fri, 05 Jul 2019 11:34:58: 64000000 INFO @ Fri, 05 Jul 2019 11:35:03: 82000000 INFO @ Fri, 05 Jul 2019 11:35:05: 65000000 INFO @ Fri, 05 Jul 2019 11:35:06: 62000000 INFO @ Fri, 05 Jul 2019 11:35:10: 83000000 INFO @ Fri, 05 Jul 2019 11:35:13: 66000000 INFO @ Fri, 05 Jul 2019 11:35:15: 63000000 INFO @ Fri, 05 Jul 2019 11:35:17: 84000000 INFO @ Fri, 05 Jul 2019 11:35:21: 67000000 INFO @ Fri, 05 Jul 2019 11:35:24: 85000000 INFO @ Fri, 05 Jul 2019 11:35:24: 64000000 INFO @ Fri, 05 Jul 2019 11:35:29: 68000000 INFO @ Fri, 05 Jul 2019 11:35:31: 86000000 INFO @ Fri, 05 Jul 2019 11:35:33: 65000000 INFO @ Fri, 05 Jul 2019 11:35:37: 69000000 INFO @ Fri, 05 Jul 2019 11:35:39: 87000000 INFO @ Fri, 05 Jul 2019 11:35:42: 66000000 INFO @ Fri, 05 Jul 2019 11:35:45: 70000000 INFO @ Fri, 05 Jul 2019 11:35:46: 88000000 INFO @ Fri, 05 Jul 2019 11:35:52: 67000000 INFO @ Fri, 05 Jul 2019 11:35:52: 71000000 INFO @ Fri, 05 Jul 2019 11:35:53: 89000000 INFO @ Fri, 05 Jul 2019 11:36:00: 90000000 INFO @ Fri, 05 Jul 2019 11:36:00: 72000000 INFO @ Fri, 05 Jul 2019 11:36:01: 68000000 INFO @ Fri, 05 Jul 2019 11:36:08: 91000000 INFO @ Fri, 05 Jul 2019 11:36:08: 73000000 INFO @ Fri, 05 Jul 2019 11:36:10: 69000000 INFO @ Fri, 05 Jul 2019 11:36:15: 92000000 INFO @ Fri, 05 Jul 2019 11:36:16: 74000000 INFO @ Fri, 05 Jul 2019 11:36:19: 70000000 INFO @ Fri, 05 Jul 2019 11:36:22: 93000000 INFO @ Fri, 05 Jul 2019 11:36:24: 75000000 INFO @ Fri, 05 Jul 2019 11:36:28: 71000000 INFO @ Fri, 05 Jul 2019 11:36:29: 94000000 INFO @ Fri, 05 Jul 2019 11:36:32: 76000000 INFO @ Fri, 05 Jul 2019 11:36:37: 95000000 INFO @ Fri, 05 Jul 2019 11:36:37: 72000000 INFO @ Fri, 05 Jul 2019 11:36:40: 77000000 INFO @ Fri, 05 Jul 2019 11:36:44: 96000000 INFO @ Fri, 05 Jul 2019 11:36:46: 73000000 INFO @ Fri, 05 Jul 2019 11:36:48: 78000000 INFO @ Fri, 05 Jul 2019 11:36:51: 97000000 INFO @ Fri, 05 Jul 2019 11:36:55: 79000000 INFO @ Fri, 05 Jul 2019 11:36:56: 74000000 INFO @ Fri, 05 Jul 2019 11:37:01: 98000000 INFO @ Fri, 05 Jul 2019 11:37:03: 80000000 INFO @ Fri, 05 Jul 2019 11:37:05: 75000000 INFO @ Fri, 05 Jul 2019 11:37:08: 99000000 INFO @ Fri, 05 Jul 2019 11:37:11: 81000000 INFO @ Fri, 05 Jul 2019 11:37:14: 76000000 INFO @ Fri, 05 Jul 2019 11:37:15: 100000000 INFO @ Fri, 05 Jul 2019 11:37:19: 82000000 INFO @ Fri, 05 Jul 2019 11:37:22: 101000000 INFO @ Fri, 05 Jul 2019 11:37:23: 77000000 INFO @ Fri, 05 Jul 2019 11:37:27: 83000000 INFO @ Fri, 05 Jul 2019 11:37:30: 102000000 INFO @ Fri, 05 Jul 2019 11:37:32: 78000000 INFO @ Fri, 05 Jul 2019 11:37:34: 84000000 INFO @ Fri, 05 Jul 2019 11:37:37: 103000000 INFO @ Fri, 05 Jul 2019 11:37:41: 79000000 INFO @ Fri, 05 Jul 2019 11:37:42: 85000000 INFO @ Fri, 05 Jul 2019 11:37:44: 104000000 INFO @ Fri, 05 Jul 2019 11:37:50: 80000000 INFO @ Fri, 05 Jul 2019 11:37:50: 86000000 INFO @ Fri, 05 Jul 2019 11:37:51: 105000000 INFO @ Fri, 05 Jul 2019 11:37:58: 87000000 INFO @ Fri, 05 Jul 2019 11:37:59: 106000000 INFO @ Fri, 05 Jul 2019 11:37:59: 81000000 INFO @ Fri, 05 Jul 2019 11:38:06: 88000000 INFO @ Fri, 05 Jul 2019 11:38:07: 107000000 INFO @ Fri, 05 Jul 2019 11:38:08: 82000000 INFO @ Fri, 05 Jul 2019 11:38:14: 89000000 INFO @ Fri, 05 Jul 2019 11:38:14: 108000000 INFO @ Fri, 05 Jul 2019 11:38:17: 83000000 INFO @ Fri, 05 Jul 2019 11:38:21: 90000000 INFO @ Fri, 05 Jul 2019 11:38:22: 109000000 INFO @ Fri, 05 Jul 2019 11:38:26: 84000000 INFO @ Fri, 05 Jul 2019 11:38:29: 91000000 INFO @ Fri, 05 Jul 2019 11:38:30: 110000000 INFO @ Fri, 05 Jul 2019 11:38:35: 85000000 INFO @ Fri, 05 Jul 2019 11:38:37: 92000000 INFO @ Fri, 05 Jul 2019 11:38:37: 111000000 INFO @ Fri, 05 Jul 2019 11:38:45: 112000000 INFO @ Fri, 05 Jul 2019 11:38:45: 93000000 INFO @ Fri, 05 Jul 2019 11:38:45: 86000000 INFO @ Fri, 05 Jul 2019 11:38:52: 113000000 INFO @ Fri, 05 Jul 2019 11:38:53: 94000000 INFO @ Fri, 05 Jul 2019 11:38:54: 87000000 INFO @ Fri, 05 Jul 2019 11:39:00: 114000000 INFO @ Fri, 05 Jul 2019 11:39:01: 95000000 INFO @ Fri, 05 Jul 2019 11:39:03: 88000000 INFO @ Fri, 05 Jul 2019 11:39:07: 115000000 INFO @ Fri, 05 Jul 2019 11:39:09: 96000000 INFO @ Fri, 05 Jul 2019 11:39:12: 89000000 INFO @ Fri, 05 Jul 2019 11:39:14: 116000000 INFO @ Fri, 05 Jul 2019 11:39:17: 97000000 INFO @ Fri, 05 Jul 2019 11:39:21: 90000000 INFO @ Fri, 05 Jul 2019 11:39:22: 117000000 INFO @ Fri, 05 Jul 2019 11:39:25: 98000000 INFO @ Fri, 05 Jul 2019 11:39:30: 118000000 INFO @ Fri, 05 Jul 2019 11:39:30: 91000000 INFO @ Fri, 05 Jul 2019 11:39:34: 99000000 INFO @ Fri, 05 Jul 2019 11:39:37: 119000000 INFO @ Fri, 05 Jul 2019 11:39:40: 92000000 INFO @ Fri, 05 Jul 2019 11:39:42: 100000000 INFO @ Fri, 05 Jul 2019 11:39:44: 120000000 INFO @ Fri, 05 Jul 2019 11:39:49: 93000000 INFO @ Fri, 05 Jul 2019 11:39:50: 101000000 INFO @ Fri, 05 Jul 2019 11:39:52: 121000000 INFO @ Fri, 05 Jul 2019 11:39:58: 94000000 INFO @ Fri, 05 Jul 2019 11:39:58: 102000000 INFO @ Fri, 05 Jul 2019 11:40:00: 122000000 INFO @ Fri, 05 Jul 2019 11:40:06: 103000000 INFO @ Fri, 05 Jul 2019 11:40:07: 123000000 INFO @ Fri, 05 Jul 2019 11:40:07: 95000000 INFO @ Fri, 05 Jul 2019 11:40:14: 104000000 INFO @ Fri, 05 Jul 2019 11:40:14: 124000000 INFO @ Fri, 05 Jul 2019 11:40:17: 96000000 INFO @ Fri, 05 Jul 2019 11:40:21: 105000000 INFO @ Fri, 05 Jul 2019 11:40:22: 125000000 INFO @ Fri, 05 Jul 2019 11:40:26: 97000000 INFO @ Fri, 05 Jul 2019 11:40:29: 126000000 INFO @ Fri, 05 Jul 2019 11:40:30: 106000000 INFO @ Fri, 05 Jul 2019 11:40:35: 98000000 INFO @ Fri, 05 Jul 2019 11:40:36: 127000000 INFO @ Fri, 05 Jul 2019 11:40:40: 107000000 INFO @ Fri, 05 Jul 2019 11:40:43: 128000000 INFO @ Fri, 05 Jul 2019 11:40:44: 99000000 INFO @ Fri, 05 Jul 2019 11:40:48: 108000000 INFO @ Fri, 05 Jul 2019 11:40:51: 129000000 INFO @ Fri, 05 Jul 2019 11:40:53: 100000000 INFO @ Fri, 05 Jul 2019 11:40:57: 109000000 INFO @ Fri, 05 Jul 2019 11:40:58: 130000000 INFO @ Fri, 05 Jul 2019 11:41:03: 101000000 INFO @ Fri, 05 Jul 2019 11:41:05: 110000000 INFO @ Fri, 05 Jul 2019 11:41:05: 131000000 INFO @ Fri, 05 Jul 2019 11:41:12: 102000000 INFO @ Fri, 05 Jul 2019 11:41:13: 132000000 INFO @ Fri, 05 Jul 2019 11:41:14: 111000000 INFO @ Fri, 05 Jul 2019 11:41:20: 133000000 INFO @ Fri, 05 Jul 2019 11:41:21: 103000000 INFO @ Fri, 05 Jul 2019 11:41:22: 112000000 INFO @ Fri, 05 Jul 2019 11:41:27: 134000000 INFO @ Fri, 05 Jul 2019 11:41:30: 104000000 INFO @ Fri, 05 Jul 2019 11:41:30: 113000000 INFO @ Fri, 05 Jul 2019 11:41:35: 135000000 INFO @ Fri, 05 Jul 2019 11:41:38: 114000000 INFO @ Fri, 05 Jul 2019 11:41:39: 105000000 INFO @ Fri, 05 Jul 2019 11:41:42: 136000000 INFO @ Fri, 05 Jul 2019 11:41:46: #1 tag size is determined as 50 bps INFO @ Fri, 05 Jul 2019 11:41:46: #1 tag size = 50 INFO @ Fri, 05 Jul 2019 11:41:46: #1 total tags in treatment: 136066210 INFO @ Fri, 05 Jul 2019 11:41:46: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 11:41:46: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 11:41:47: 115000000 INFO @ Fri, 05 Jul 2019 11:41:48: 106000000 INFO @ Fri, 05 Jul 2019 11:41:49: #1 tags after filtering in treatment: 136066177 INFO @ Fri, 05 Jul 2019 11:41:50: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 11:41:50: #1 finished! INFO @ Fri, 05 Jul 2019 11:41:50: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 11:41:50: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 11:41:56: 116000000 INFO @ Fri, 05 Jul 2019 11:41:58: 107000000 INFO @ Fri, 05 Jul 2019 11:42:03: #2 number of paired peaks: 5550 INFO @ Fri, 05 Jul 2019 11:42:03: start model_add_line... INFO @ Fri, 05 Jul 2019 11:42:04: start X-correlation... INFO @ Fri, 05 Jul 2019 11:42:04: end of X-cor INFO @ Fri, 05 Jul 2019 11:42:04: #2 finished! INFO @ Fri, 05 Jul 2019 11:42:04: #2 predicted fragment length is 102 bps INFO @ Fri, 05 Jul 2019 11:42:04: #2 alternative fragment length(s) may be 3,102 bps INFO @ Fri, 05 Jul 2019 11:42:04: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.20_model.r INFO @ Fri, 05 Jul 2019 11:42:04: #3 Call peaks... INFO @ Fri, 05 Jul 2019 11:42:04: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 11:42:04: 117000000 INFO @ Fri, 05 Jul 2019 11:42:08: 108000000 INFO @ Fri, 05 Jul 2019 11:42:13: 118000000 INFO @ Fri, 05 Jul 2019 11:42:18: 109000000 INFO @ Fri, 05 Jul 2019 11:42:20: 119000000 INFO @ Fri, 05 Jul 2019 11:42:28: 110000000 INFO @ Fri, 05 Jul 2019 11:42:28: 120000000 INFO @ Fri, 05 Jul 2019 11:42:37: 121000000 INFO @ Fri, 05 Jul 2019 11:42:38: 111000000 INFO @ Fri, 05 Jul 2019 11:42:45: 122000000 INFO @ Fri, 05 Jul 2019 11:42:47: 112000000 INFO @ Fri, 05 Jul 2019 11:42:53: 123000000 INFO @ Fri, 05 Jul 2019 11:42:56: 113000000 INFO @ Fri, 05 Jul 2019 11:43:01: 124000000 INFO @ Fri, 05 Jul 2019 11:43:06: 114000000 INFO @ Fri, 05 Jul 2019 11:43:09: 125000000 INFO @ Fri, 05 Jul 2019 11:43:15: 115000000 INFO @ Fri, 05 Jul 2019 11:43:16: 126000000 INFO @ Fri, 05 Jul 2019 11:43:24: 127000000 INFO @ Fri, 05 Jul 2019 11:43:24: 116000000 INFO @ Fri, 05 Jul 2019 11:43:32: 128000000 INFO @ Fri, 05 Jul 2019 11:43:34: 117000000 INFO @ Fri, 05 Jul 2019 11:43:40: 129000000 INFO @ Fri, 05 Jul 2019 11:43:43: 118000000 INFO @ Fri, 05 Jul 2019 11:43:48: 130000000 INFO @ Fri, 05 Jul 2019 11:43:52: 119000000 INFO @ Fri, 05 Jul 2019 11:43:56: 131000000 INFO @ Fri, 05 Jul 2019 11:44:02: 120000000 INFO @ Fri, 05 Jul 2019 11:44:04: 132000000 INFO @ Fri, 05 Jul 2019 11:44:11: 121000000 INFO @ Fri, 05 Jul 2019 11:44:11: 133000000 INFO @ Fri, 05 Jul 2019 11:44:19: 134000000 INFO @ Fri, 05 Jul 2019 11:44:21: 122000000 INFO @ Fri, 05 Jul 2019 11:44:27: 135000000 INFO @ Fri, 05 Jul 2019 11:44:30: 123000000 INFO @ Fri, 05 Jul 2019 11:44:35: 136000000 INFO @ Fri, 05 Jul 2019 11:44:37: #1 tag size is determined as 50 bps INFO @ Fri, 05 Jul 2019 11:44:37: #1 tag size = 50 INFO @ Fri, 05 Jul 2019 11:44:37: #1 total tags in treatment: 136066210 INFO @ Fri, 05 Jul 2019 11:44:37: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 11:44:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 11:44:39: 124000000 INFO @ Fri, 05 Jul 2019 11:44:40: #1 tags after filtering in treatment: 136066177 INFO @ Fri, 05 Jul 2019 11:44:40: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 11:44:40: #1 finished! INFO @ Fri, 05 Jul 2019 11:44:40: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 11:44:40: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 11:44:48: 125000000 INFO @ Fri, 05 Jul 2019 11:44:53: #2 number of paired peaks: 5550 INFO @ Fri, 05 Jul 2019 11:44:53: start model_add_line... INFO @ Fri, 05 Jul 2019 11:44:55: start X-correlation... INFO @ Fri, 05 Jul 2019 11:44:55: end of X-cor INFO @ Fri, 05 Jul 2019 11:44:55: #2 finished! INFO @ Fri, 05 Jul 2019 11:44:55: #2 predicted fragment length is 102 bps INFO @ Fri, 05 Jul 2019 11:44:55: #2 alternative fragment length(s) may be 3,102 bps INFO @ Fri, 05 Jul 2019 11:44:55: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.05_model.r INFO @ Fri, 05 Jul 2019 11:44:55: #3 Call peaks... INFO @ Fri, 05 Jul 2019 11:44:55: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 11:44:57: 126000000 INFO @ Fri, 05 Jul 2019 11:45:06: 127000000 INFO @ Fri, 05 Jul 2019 11:45:15: 128000000 INFO @ Fri, 05 Jul 2019 11:45:24: 129000000 INFO @ Fri, 05 Jul 2019 11:45:33: 130000000 INFO @ Fri, 05 Jul 2019 11:45:42: 131000000 INFO @ Fri, 05 Jul 2019 11:45:51: 132000000 INFO @ Fri, 05 Jul 2019 11:46:00: 133000000 INFO @ Fri, 05 Jul 2019 11:46:09: 134000000 INFO @ Fri, 05 Jul 2019 11:46:19: 135000000 INFO @ Fri, 05 Jul 2019 11:46:28: 136000000 INFO @ Fri, 05 Jul 2019 11:46:30: #1 tag size is determined as 50 bps INFO @ Fri, 05 Jul 2019 11:46:30: #1 tag size = 50 INFO @ Fri, 05 Jul 2019 11:46:30: #1 total tags in treatment: 136066210 INFO @ Fri, 05 Jul 2019 11:46:30: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 11:46:30: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 11:46:33: #1 tags after filtering in treatment: 136066177 INFO @ Fri, 05 Jul 2019 11:46:33: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 11:46:33: #1 finished! INFO @ Fri, 05 Jul 2019 11:46:33: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 11:46:33: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 11:46:46: #2 number of paired peaks: 5550 INFO @ Fri, 05 Jul 2019 11:46:46: start model_add_line... INFO @ Fri, 05 Jul 2019 11:46:47: start X-correlation... INFO @ Fri, 05 Jul 2019 11:46:47: end of X-cor INFO @ Fri, 05 Jul 2019 11:46:47: #2 finished! INFO @ Fri, 05 Jul 2019 11:46:47: #2 predicted fragment length is 102 bps INFO @ Fri, 05 Jul 2019 11:46:47: #2 alternative fragment length(s) may be 3,102 bps INFO @ Fri, 05 Jul 2019 11:46:47: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.10_model.r INFO @ Fri, 05 Jul 2019 11:46:47: #3 Call peaks... INFO @ Fri, 05 Jul 2019 11:46:47: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 11:48:57: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 11:51:38: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 11:52:29: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.20_peaks.xls INFO @ Fri, 05 Jul 2019 11:52:29: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.20_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 11:52:29: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.20_summits.bed INFO @ Fri, 05 Jul 2019 11:52:29: Done! pass1 - making usageList (41 chroms): 2 millis pass2 - checking and writing primary data (541 records, 4 fields): 5 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 11:53:32: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 11:55:05: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.05_peaks.xls INFO @ Fri, 05 Jul 2019 11:55:05: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.05_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 11:55:05: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.05_summits.bed INFO @ Fri, 05 Jul 2019 11:55:05: Done! pass1 - making usageList (109 chroms): 2 millis pass2 - checking and writing primary data (7005 records, 4 fields): 16 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 11:57:06: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.10_peaks.xls INFO @ Fri, 05 Jul 2019 11:57:06: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.10_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 11:57:06: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101948/ERX101948.10_summits.bed INFO @ Fri, 05 Jul 2019 11:57:06: Done! pass1 - making usageList (60 chroms): 3 millis pass2 - checking and writing primary data (1888 records, 4 fields): 7 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。