Job ID = 2001174 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-07-04T19:21:58 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:31:48 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:33:24 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:33:38 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:36:47 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:40:10 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:43:52 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:47:37 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:55:37 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:56:01 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:57:46 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:03:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:11:04 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:18:38 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 165,518,281 reads read : 165,518,281 reads written : 165,518,281 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:02 Multiseed full-index search: 03:02:59 165518281 reads; of these: 165518281 (100.00%) were unpaired; of these: 3517426 (2.13%) aligned 0 times 118181563 (71.40%) aligned exactly 1 time 43819292 (26.47%) aligned >1 times 97.87% overall alignment rate Time searching: 03:03:03 Overall time: 03:03:03 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 68 files... [bam_rmdupse_core] 23761930 / 162000855 = 0.1467 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 09:57:37: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 09:57:37: #1 read tag files... INFO @ Fri, 05 Jul 2019 09:57:37: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 09:57:37: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 09:57:37: #1 read tag files... INFO @ Fri, 05 Jul 2019 09:57:37: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 09:57:38: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 09:57:38: #1 read tag files... INFO @ Fri, 05 Jul 2019 09:57:38: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 09:57:46: 1000000 INFO @ Fri, 05 Jul 2019 09:57:47: 1000000 INFO @ Fri, 05 Jul 2019 09:57:49: 1000000 INFO @ Fri, 05 Jul 2019 09:57:55: 2000000 INFO @ Fri, 05 Jul 2019 09:57:56: 2000000 INFO @ Fri, 05 Jul 2019 09:57:59: 2000000 INFO @ Fri, 05 Jul 2019 09:58:03: 3000000 INFO @ Fri, 05 Jul 2019 09:58:04: 3000000 INFO @ Fri, 05 Jul 2019 09:58:10: 3000000 INFO @ Fri, 05 Jul 2019 09:58:12: 4000000 INFO @ Fri, 05 Jul 2019 09:58:13: 4000000 INFO @ Fri, 05 Jul 2019 09:58:20: 5000000 INFO @ Fri, 05 Jul 2019 09:58:20: 4000000 INFO @ Fri, 05 Jul 2019 09:58:22: 5000000 INFO @ Fri, 05 Jul 2019 09:58:28: 6000000 INFO @ Fri, 05 Jul 2019 09:58:30: 5000000 INFO @ Fri, 05 Jul 2019 09:58:31: 6000000 INFO @ Fri, 05 Jul 2019 09:58:37: 7000000 INFO @ Fri, 05 Jul 2019 09:58:40: 7000000 INFO @ Fri, 05 Jul 2019 09:58:41: 6000000 INFO @ Fri, 05 Jul 2019 09:58:45: 8000000 INFO @ Fri, 05 Jul 2019 09:58:49: 8000000 INFO @ Fri, 05 Jul 2019 09:58:52: 7000000 INFO @ Fri, 05 Jul 2019 09:58:54: 9000000 INFO @ Fri, 05 Jul 2019 09:58:57: 9000000 INFO @ Fri, 05 Jul 2019 09:59:02: 8000000 INFO @ Fri, 05 Jul 2019 09:59:02: 10000000 INFO @ Fri, 05 Jul 2019 09:59:06: 10000000 INFO @ Fri, 05 Jul 2019 09:59:11: 11000000 INFO @ Fri, 05 Jul 2019 09:59:13: 9000000 INFO @ Fri, 05 Jul 2019 09:59:15: 11000000 INFO @ Fri, 05 Jul 2019 09:59:19: 12000000 INFO @ Fri, 05 Jul 2019 09:59:24: 10000000 INFO @ Fri, 05 Jul 2019 09:59:24: 12000000 INFO @ Fri, 05 Jul 2019 09:59:28: 13000000 INFO @ Fri, 05 Jul 2019 09:59:33: 13000000 INFO @ Fri, 05 Jul 2019 09:59:34: 11000000 INFO @ Fri, 05 Jul 2019 09:59:37: 14000000 INFO @ Fri, 05 Jul 2019 09:59:41: 14000000 INFO @ Fri, 05 Jul 2019 09:59:45: 12000000 INFO @ Fri, 05 Jul 2019 09:59:45: 15000000 INFO @ Fri, 05 Jul 2019 09:59:50: 15000000 INFO @ Fri, 05 Jul 2019 09:59:53: 16000000 INFO @ Fri, 05 Jul 2019 09:59:55: 13000000 INFO @ Fri, 05 Jul 2019 09:59:59: 16000000 INFO @ Fri, 05 Jul 2019 10:00:01: 17000000 INFO @ Fri, 05 Jul 2019 10:00:05: 14000000 INFO @ Fri, 05 Jul 2019 10:00:07: 17000000 INFO @ Fri, 05 Jul 2019 10:00:10: 18000000 INFO @ Fri, 05 Jul 2019 10:00:16: 15000000 INFO @ Fri, 05 Jul 2019 10:00:16: 18000000 INFO @ Fri, 05 Jul 2019 10:00:18: 19000000 INFO @ Fri, 05 Jul 2019 10:00:24: 19000000 INFO @ Fri, 05 Jul 2019 10:00:26: 16000000 INFO @ Fri, 05 Jul 2019 10:00:27: 20000000 INFO @ Fri, 05 Jul 2019 10:00:33: 20000000 INFO @ Fri, 05 Jul 2019 10:00:36: 21000000 INFO @ Fri, 05 Jul 2019 10:00:36: 17000000 INFO @ Fri, 05 Jul 2019 10:00:42: 21000000 INFO @ Fri, 05 Jul 2019 10:00:44: 22000000 INFO @ Fri, 05 Jul 2019 10:00:47: 18000000 INFO @ Fri, 05 Jul 2019 10:00:51: 22000000 INFO @ Fri, 05 Jul 2019 10:00:52: 23000000 INFO @ Fri, 05 Jul 2019 10:00:57: 19000000 INFO @ Fri, 05 Jul 2019 10:01:00: 23000000 INFO @ Fri, 05 Jul 2019 10:01:01: 24000000 INFO @ Fri, 05 Jul 2019 10:01:07: 20000000 INFO @ Fri, 05 Jul 2019 10:01:09: 24000000 INFO @ Fri, 05 Jul 2019 10:01:09: 25000000 INFO @ Fri, 05 Jul 2019 10:01:17: 21000000 INFO @ Fri, 05 Jul 2019 10:01:18: 25000000 INFO @ Fri, 05 Jul 2019 10:01:18: 26000000 INFO @ Fri, 05 Jul 2019 10:01:27: 26000000 INFO @ Fri, 05 Jul 2019 10:01:27: 22000000 INFO @ Fri, 05 Jul 2019 10:01:28: 27000000 INFO @ Fri, 05 Jul 2019 10:01:36: 28000000 INFO @ Fri, 05 Jul 2019 10:01:37: 27000000 INFO @ Fri, 05 Jul 2019 10:01:38: 23000000 INFO @ Fri, 05 Jul 2019 10:01:45: 29000000 INFO @ Fri, 05 Jul 2019 10:01:46: 28000000 INFO @ Fri, 05 Jul 2019 10:01:49: 24000000 INFO @ Fri, 05 Jul 2019 10:01:54: 30000000 INFO @ Fri, 05 Jul 2019 10:01:55: 29000000 INFO @ Fri, 05 Jul 2019 10:02:00: 25000000 INFO @ Fri, 05 Jul 2019 10:02:02: 31000000 INFO @ Fri, 05 Jul 2019 10:02:04: 30000000 INFO @ Fri, 05 Jul 2019 10:02:11: 32000000 INFO @ Fri, 05 Jul 2019 10:02:12: 26000000 INFO @ Fri, 05 Jul 2019 10:02:13: 31000000 INFO @ Fri, 05 Jul 2019 10:02:19: 33000000 INFO @ Fri, 05 Jul 2019 10:02:22: 32000000 INFO @ Fri, 05 Jul 2019 10:02:23: 27000000 INFO @ Fri, 05 Jul 2019 10:02:28: 34000000 INFO @ Fri, 05 Jul 2019 10:02:32: 33000000 INFO @ Fri, 05 Jul 2019 10:02:34: 28000000 INFO @ Fri, 05 Jul 2019 10:02:36: 35000000 INFO @ Fri, 05 Jul 2019 10:02:42: 34000000 INFO @ Fri, 05 Jul 2019 10:02:44: 36000000 INFO @ Fri, 05 Jul 2019 10:02:45: 29000000 INFO @ Fri, 05 Jul 2019 10:02:51: 35000000 INFO @ Fri, 05 Jul 2019 10:02:53: 37000000 INFO @ Fri, 05 Jul 2019 10:02:56: 30000000 INFO @ Fri, 05 Jul 2019 10:03:00: 36000000 INFO @ Fri, 05 Jul 2019 10:03:02: 38000000 INFO @ Fri, 05 Jul 2019 10:03:07: 31000000 INFO @ Fri, 05 Jul 2019 10:03:09: 37000000 INFO @ Fri, 05 Jul 2019 10:03:11: 39000000 INFO @ Fri, 05 Jul 2019 10:03:18: 32000000 INFO @ Fri, 05 Jul 2019 10:03:18: 38000000 INFO @ Fri, 05 Jul 2019 10:03:19: 40000000 INFO @ Fri, 05 Jul 2019 10:03:27: 39000000 INFO @ Fri, 05 Jul 2019 10:03:28: 41000000 INFO @ Fri, 05 Jul 2019 10:03:28: 33000000 INFO @ Fri, 05 Jul 2019 10:03:36: 40000000 INFO @ Fri, 05 Jul 2019 10:03:37: 42000000 INFO @ Fri, 05 Jul 2019 10:03:39: 34000000 INFO @ Fri, 05 Jul 2019 10:03:45: 43000000 INFO @ Fri, 05 Jul 2019 10:03:45: 41000000 INFO @ Fri, 05 Jul 2019 10:03:50: 35000000 INFO @ Fri, 05 Jul 2019 10:03:54: 44000000 INFO @ Fri, 05 Jul 2019 10:03:54: 42000000 INFO @ Fri, 05 Jul 2019 10:04:00: 36000000 INFO @ Fri, 05 Jul 2019 10:04:03: 45000000 INFO @ Fri, 05 Jul 2019 10:04:03: 43000000 INFO @ Fri, 05 Jul 2019 10:04:11: 37000000 INFO @ Fri, 05 Jul 2019 10:04:12: 46000000 INFO @ Fri, 05 Jul 2019 10:04:12: 44000000 INFO @ Fri, 05 Jul 2019 10:04:21: 47000000 INFO @ Fri, 05 Jul 2019 10:04:22: 38000000 INFO @ Fri, 05 Jul 2019 10:04:22: 45000000 INFO @ Fri, 05 Jul 2019 10:04:30: 48000000 INFO @ Fri, 05 Jul 2019 10:04:31: 46000000 INFO @ Fri, 05 Jul 2019 10:04:32: 39000000 INFO @ Fri, 05 Jul 2019 10:04:39: 49000000 INFO @ Fri, 05 Jul 2019 10:04:40: 47000000 INFO @ Fri, 05 Jul 2019 10:04:43: 40000000 INFO @ Fri, 05 Jul 2019 10:04:49: 50000000 INFO @ Fri, 05 Jul 2019 10:04:49: 48000000 INFO @ Fri, 05 Jul 2019 10:04:54: 41000000 INFO @ Fri, 05 Jul 2019 10:04:58: 51000000 INFO @ Fri, 05 Jul 2019 10:04:58: 49000000 INFO @ Fri, 05 Jul 2019 10:05:05: 42000000 INFO @ Fri, 05 Jul 2019 10:05:07: 52000000 INFO @ Fri, 05 Jul 2019 10:05:07: 50000000 INFO @ Fri, 05 Jul 2019 10:05:15: 43000000 INFO @ Fri, 05 Jul 2019 10:05:16: 53000000 INFO @ Fri, 05 Jul 2019 10:05:16: 51000000 INFO @ Fri, 05 Jul 2019 10:05:25: 52000000 INFO @ Fri, 05 Jul 2019 10:05:25: 54000000 INFO @ Fri, 05 Jul 2019 10:05:26: 44000000 INFO @ Fri, 05 Jul 2019 10:05:33: 55000000 INFO @ Fri, 05 Jul 2019 10:05:34: 53000000 INFO @ Fri, 05 Jul 2019 10:05:36: 45000000 INFO @ Fri, 05 Jul 2019 10:05:42: 56000000 INFO @ Fri, 05 Jul 2019 10:05:43: 54000000 INFO @ Fri, 05 Jul 2019 10:05:46: 46000000 INFO @ Fri, 05 Jul 2019 10:05:50: 57000000 INFO @ Fri, 05 Jul 2019 10:05:52: 55000000 INFO @ Fri, 05 Jul 2019 10:05:57: 47000000 INFO @ Fri, 05 Jul 2019 10:05:58: 58000000 INFO @ Fri, 05 Jul 2019 10:06:01: 56000000 INFO @ Fri, 05 Jul 2019 10:06:06: 59000000 INFO @ Fri, 05 Jul 2019 10:06:08: 48000000 INFO @ Fri, 05 Jul 2019 10:06:10: 57000000 INFO @ Fri, 05 Jul 2019 10:06:14: 60000000 INFO @ Fri, 05 Jul 2019 10:06:18: 49000000 INFO @ Fri, 05 Jul 2019 10:06:19: 58000000 INFO @ Fri, 05 Jul 2019 10:06:23: 61000000 INFO @ Fri, 05 Jul 2019 10:06:27: 59000000 INFO @ Fri, 05 Jul 2019 10:06:29: 50000000 INFO @ Fri, 05 Jul 2019 10:06:31: 62000000 INFO @ Fri, 05 Jul 2019 10:06:36: 60000000 INFO @ Fri, 05 Jul 2019 10:06:39: 51000000 INFO @ Fri, 05 Jul 2019 10:06:39: 63000000 INFO @ Fri, 05 Jul 2019 10:06:45: 61000000 INFO @ Fri, 05 Jul 2019 10:06:48: 64000000 INFO @ Fri, 05 Jul 2019 10:06:49: 52000000 INFO @ Fri, 05 Jul 2019 10:06:54: 62000000 INFO @ Fri, 05 Jul 2019 10:06:56: 65000000 INFO @ Fri, 05 Jul 2019 10:06:59: 53000000 INFO @ Fri, 05 Jul 2019 10:07:03: 63000000 INFO @ Fri, 05 Jul 2019 10:07:04: 66000000 INFO @ Fri, 05 Jul 2019 10:07:09: 54000000 INFO @ Fri, 05 Jul 2019 10:07:11: 64000000 INFO @ Fri, 05 Jul 2019 10:07:12: 67000000 INFO @ Fri, 05 Jul 2019 10:07:20: 55000000 INFO @ Fri, 05 Jul 2019 10:07:20: 65000000 INFO @ Fri, 05 Jul 2019 10:07:21: 68000000 INFO @ Fri, 05 Jul 2019 10:07:29: 69000000 INFO @ Fri, 05 Jul 2019 10:07:29: 66000000 INFO @ Fri, 05 Jul 2019 10:07:30: 56000000 INFO @ Fri, 05 Jul 2019 10:07:37: 70000000 INFO @ Fri, 05 Jul 2019 10:07:38: 67000000 INFO @ Fri, 05 Jul 2019 10:07:40: 57000000 INFO @ Fri, 05 Jul 2019 10:07:45: 71000000 INFO @ Fri, 05 Jul 2019 10:07:47: 68000000 INFO @ Fri, 05 Jul 2019 10:07:51: 58000000 INFO @ Fri, 05 Jul 2019 10:07:54: 72000000 INFO @ Fri, 05 Jul 2019 10:07:56: 69000000 INFO @ Fri, 05 Jul 2019 10:08:01: 59000000 INFO @ Fri, 05 Jul 2019 10:08:02: 73000000 INFO @ Fri, 05 Jul 2019 10:08:05: 70000000 INFO @ Fri, 05 Jul 2019 10:08:10: 74000000 INFO @ Fri, 05 Jul 2019 10:08:11: 60000000 INFO @ Fri, 05 Jul 2019 10:08:14: 71000000 INFO @ Fri, 05 Jul 2019 10:08:19: 75000000 INFO @ Fri, 05 Jul 2019 10:08:22: 61000000 INFO @ Fri, 05 Jul 2019 10:08:23: 72000000 INFO @ Fri, 05 Jul 2019 10:08:27: 76000000 INFO @ Fri, 05 Jul 2019 10:08:32: 73000000 INFO @ Fri, 05 Jul 2019 10:08:32: 62000000 INFO @ Fri, 05 Jul 2019 10:08:35: 77000000 INFO @ Fri, 05 Jul 2019 10:08:41: 74000000 INFO @ Fri, 05 Jul 2019 10:08:43: 63000000 INFO @ Fri, 05 Jul 2019 10:08:44: 78000000 INFO @ Fri, 05 Jul 2019 10:08:50: 75000000 INFO @ Fri, 05 Jul 2019 10:08:52: 79000000 INFO @ Fri, 05 Jul 2019 10:08:53: 64000000 INFO @ Fri, 05 Jul 2019 10:08:59: 76000000 INFO @ Fri, 05 Jul 2019 10:09:01: 80000000 INFO @ Fri, 05 Jul 2019 10:09:04: 65000000 INFO @ Fri, 05 Jul 2019 10:09:08: 77000000 INFO @ Fri, 05 Jul 2019 10:09:09: 81000000 INFO @ Fri, 05 Jul 2019 10:09:14: 66000000 INFO @ Fri, 05 Jul 2019 10:09:17: 78000000 INFO @ Fri, 05 Jul 2019 10:09:18: 82000000 INFO @ Fri, 05 Jul 2019 10:09:24: 67000000 INFO @ Fri, 05 Jul 2019 10:09:26: 79000000 INFO @ Fri, 05 Jul 2019 10:09:26: 83000000 INFO @ Fri, 05 Jul 2019 10:09:34: 84000000 INFO @ Fri, 05 Jul 2019 10:09:35: 68000000 INFO @ Fri, 05 Jul 2019 10:09:35: 80000000 INFO @ Fri, 05 Jul 2019 10:09:43: 85000000 INFO @ Fri, 05 Jul 2019 10:09:44: 81000000 INFO @ Fri, 05 Jul 2019 10:09:45: 69000000 INFO @ Fri, 05 Jul 2019 10:09:51: 86000000 INFO @ Fri, 05 Jul 2019 10:09:53: 82000000 INFO @ Fri, 05 Jul 2019 10:09:55: 70000000 INFO @ Fri, 05 Jul 2019 10:09:59: 87000000 INFO @ Fri, 05 Jul 2019 10:10:02: 83000000 INFO @ Fri, 05 Jul 2019 10:10:05: 71000000 INFO @ Fri, 05 Jul 2019 10:10:08: 88000000 INFO @ Fri, 05 Jul 2019 10:10:11: 84000000 INFO @ Fri, 05 Jul 2019 10:10:15: 72000000 INFO @ Fri, 05 Jul 2019 10:10:16: 89000000 INFO @ Fri, 05 Jul 2019 10:10:19: 85000000 INFO @ Fri, 05 Jul 2019 10:10:24: 90000000 INFO @ Fri, 05 Jul 2019 10:10:24: 73000000 INFO @ Fri, 05 Jul 2019 10:10:28: 86000000 INFO @ Fri, 05 Jul 2019 10:10:32: 91000000 INFO @ Fri, 05 Jul 2019 10:10:34: 74000000 INFO @ Fri, 05 Jul 2019 10:10:37: 87000000 INFO @ Fri, 05 Jul 2019 10:10:40: 92000000 INFO @ Fri, 05 Jul 2019 10:10:44: 75000000 INFO @ Fri, 05 Jul 2019 10:10:46: 88000000 INFO @ Fri, 05 Jul 2019 10:10:49: 93000000 INFO @ Fri, 05 Jul 2019 10:10:54: 89000000 INFO @ Fri, 05 Jul 2019 10:10:54: 76000000 INFO @ Fri, 05 Jul 2019 10:10:57: 94000000 INFO @ Fri, 05 Jul 2019 10:11:03: 90000000 INFO @ Fri, 05 Jul 2019 10:11:04: 77000000 INFO @ Fri, 05 Jul 2019 10:11:05: 95000000 INFO @ Fri, 05 Jul 2019 10:11:12: 91000000 INFO @ Fri, 05 Jul 2019 10:11:13: 96000000 INFO @ Fri, 05 Jul 2019 10:11:14: 78000000 INFO @ Fri, 05 Jul 2019 10:11:20: 92000000 INFO @ Fri, 05 Jul 2019 10:11:22: 97000000 INFO @ Fri, 05 Jul 2019 10:11:24: 79000000 INFO @ Fri, 05 Jul 2019 10:11:29: 93000000 INFO @ Fri, 05 Jul 2019 10:11:30: 98000000 INFO @ Fri, 05 Jul 2019 10:11:34: 80000000 INFO @ Fri, 05 Jul 2019 10:11:38: 94000000 INFO @ Fri, 05 Jul 2019 10:11:39: 99000000 INFO @ Fri, 05 Jul 2019 10:11:45: 81000000 INFO @ Fri, 05 Jul 2019 10:11:46: 95000000 INFO @ Fri, 05 Jul 2019 10:11:47: 100000000 INFO @ Fri, 05 Jul 2019 10:11:55: 82000000 INFO @ Fri, 05 Jul 2019 10:11:55: 96000000 INFO @ Fri, 05 Jul 2019 10:11:56: 101000000 INFO @ Fri, 05 Jul 2019 10:12:04: 97000000 INFO @ Fri, 05 Jul 2019 10:12:04: 102000000 INFO @ Fri, 05 Jul 2019 10:12:05: 83000000 INFO @ Fri, 05 Jul 2019 10:12:12: 103000000 INFO @ Fri, 05 Jul 2019 10:12:13: 98000000 INFO @ Fri, 05 Jul 2019 10:12:15: 84000000 INFO @ Fri, 05 Jul 2019 10:12:20: 104000000 INFO @ Fri, 05 Jul 2019 10:12:23: 99000000 INFO @ Fri, 05 Jul 2019 10:12:25: 85000000 INFO @ Fri, 05 Jul 2019 10:12:29: 105000000 INFO @ Fri, 05 Jul 2019 10:12:32: 100000000 INFO @ Fri, 05 Jul 2019 10:12:35: 86000000 INFO @ Fri, 05 Jul 2019 10:12:37: 106000000 INFO @ Fri, 05 Jul 2019 10:12:42: 101000000 INFO @ Fri, 05 Jul 2019 10:12:45: 87000000 INFO @ Fri, 05 Jul 2019 10:12:45: 107000000 INFO @ Fri, 05 Jul 2019 10:12:52: 102000000 INFO @ Fri, 05 Jul 2019 10:12:53: 108000000 INFO @ Fri, 05 Jul 2019 10:12:55: 88000000 INFO @ Fri, 05 Jul 2019 10:13:02: 109000000 INFO @ Fri, 05 Jul 2019 10:13:02: 103000000 INFO @ Fri, 05 Jul 2019 10:13:05: 89000000 INFO @ Fri, 05 Jul 2019 10:13:10: 110000000 INFO @ Fri, 05 Jul 2019 10:13:13: 104000000 INFO @ Fri, 05 Jul 2019 10:13:15: 90000000 INFO @ Fri, 05 Jul 2019 10:13:18: 111000000 INFO @ Fri, 05 Jul 2019 10:13:23: 105000000 INFO @ Fri, 05 Jul 2019 10:13:24: 91000000 INFO @ Fri, 05 Jul 2019 10:13:27: 112000000 INFO @ Fri, 05 Jul 2019 10:13:33: 106000000 INFO @ Fri, 05 Jul 2019 10:13:34: 92000000 INFO @ Fri, 05 Jul 2019 10:13:35: 113000000 INFO @ Fri, 05 Jul 2019 10:13:43: 114000000 INFO @ Fri, 05 Jul 2019 10:13:43: 107000000 INFO @ Fri, 05 Jul 2019 10:13:44: 93000000 INFO @ Fri, 05 Jul 2019 10:13:51: 115000000 INFO @ Fri, 05 Jul 2019 10:13:54: 108000000 INFO @ Fri, 05 Jul 2019 10:13:55: 94000000 INFO @ Fri, 05 Jul 2019 10:14:00: 116000000 INFO @ Fri, 05 Jul 2019 10:14:05: 95000000 INFO @ Fri, 05 Jul 2019 10:14:05: 109000000 INFO @ Fri, 05 Jul 2019 10:14:08: 117000000 INFO @ Fri, 05 Jul 2019 10:14:15: 96000000 INFO @ Fri, 05 Jul 2019 10:14:16: 118000000 INFO @ Fri, 05 Jul 2019 10:14:16: 110000000 INFO @ Fri, 05 Jul 2019 10:14:25: 119000000 INFO @ Fri, 05 Jul 2019 10:14:26: 97000000 INFO @ Fri, 05 Jul 2019 10:14:27: 111000000 INFO @ Fri, 05 Jul 2019 10:14:33: 120000000 INFO @ Fri, 05 Jul 2019 10:14:36: 98000000 INFO @ Fri, 05 Jul 2019 10:14:38: 112000000 INFO @ Fri, 05 Jul 2019 10:14:42: 121000000 INFO @ Fri, 05 Jul 2019 10:14:46: 99000000 INFO @ Fri, 05 Jul 2019 10:14:49: 113000000 INFO @ Fri, 05 Jul 2019 10:14:51: 122000000 INFO @ Fri, 05 Jul 2019 10:14:56: 100000000 INFO @ Fri, 05 Jul 2019 10:14:59: 114000000 INFO @ Fri, 05 Jul 2019 10:15:00: 123000000 INFO @ Fri, 05 Jul 2019 10:15:07: 101000000 INFO @ Fri, 05 Jul 2019 10:15:09: 124000000 INFO @ Fri, 05 Jul 2019 10:15:09: 115000000 INFO @ Fri, 05 Jul 2019 10:15:17: 102000000 INFO @ Fri, 05 Jul 2019 10:15:17: 125000000 INFO @ Fri, 05 Jul 2019 10:15:19: 116000000 INFO @ Fri, 05 Jul 2019 10:15:25: 126000000 INFO @ Fri, 05 Jul 2019 10:15:27: 103000000 INFO @ Fri, 05 Jul 2019 10:15:29: 117000000 INFO @ Fri, 05 Jul 2019 10:15:33: 127000000 INFO @ Fri, 05 Jul 2019 10:15:37: 104000000 INFO @ Fri, 05 Jul 2019 10:15:39: 118000000 INFO @ Fri, 05 Jul 2019 10:15:41: 128000000 INFO @ Fri, 05 Jul 2019 10:15:48: 105000000 INFO @ Fri, 05 Jul 2019 10:15:49: 129000000 INFO @ Fri, 05 Jul 2019 10:15:49: 119000000 INFO @ Fri, 05 Jul 2019 10:15:57: 130000000 INFO @ Fri, 05 Jul 2019 10:15:58: 106000000 INFO @ Fri, 05 Jul 2019 10:15:59: 120000000 INFO @ Fri, 05 Jul 2019 10:16:05: 131000000 INFO @ Fri, 05 Jul 2019 10:16:08: 107000000 INFO @ Fri, 05 Jul 2019 10:16:10: 121000000 INFO @ Fri, 05 Jul 2019 10:16:13: 132000000 INFO @ Fri, 05 Jul 2019 10:16:19: 108000000 INFO @ Fri, 05 Jul 2019 10:16:20: 122000000 INFO @ Fri, 05 Jul 2019 10:16:21: 133000000 INFO @ Fri, 05 Jul 2019 10:16:29: 134000000 INFO @ Fri, 05 Jul 2019 10:16:30: 109000000 INFO @ Fri, 05 Jul 2019 10:16:31: 123000000 INFO @ Fri, 05 Jul 2019 10:16:37: 135000000 INFO @ Fri, 05 Jul 2019 10:16:41: 124000000 INFO @ Fri, 05 Jul 2019 10:16:41: 110000000 INFO @ Fri, 05 Jul 2019 10:16:46: 136000000 INFO @ Fri, 05 Jul 2019 10:16:50: 125000000 INFO @ Fri, 05 Jul 2019 10:16:51: 111000000 INFO @ Fri, 05 Jul 2019 10:16:54: 137000000 INFO @ Fri, 05 Jul 2019 10:17:00: 126000000 INFO @ Fri, 05 Jul 2019 10:17:02: 112000000 INFO @ Fri, 05 Jul 2019 10:17:03: 138000000 INFO @ Fri, 05 Jul 2019 10:17:07: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 10:17:07: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 10:17:07: #1 total tags in treatment: 138238925 INFO @ Fri, 05 Jul 2019 10:17:07: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 10:17:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 10:17:10: #1 tags after filtering in treatment: 138238877 INFO @ Fri, 05 Jul 2019 10:17:10: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 10:17:10: #1 finished! INFO @ Fri, 05 Jul 2019 10:17:10: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 10:17:10: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 10:17:10: 127000000 INFO @ Fri, 05 Jul 2019 10:17:12: 113000000 INFO @ Fri, 05 Jul 2019 10:17:21: 128000000 INFO @ Fri, 05 Jul 2019 10:17:22: 114000000 INFO @ Fri, 05 Jul 2019 10:17:24: #2 number of paired peaks: 12461 INFO @ Fri, 05 Jul 2019 10:17:24: start model_add_line... INFO @ Fri, 05 Jul 2019 10:17:25: start X-correlation... INFO @ Fri, 05 Jul 2019 10:17:25: end of X-cor INFO @ Fri, 05 Jul 2019 10:17:25: #2 finished! INFO @ Fri, 05 Jul 2019 10:17:25: #2 predicted fragment length is 123 bps INFO @ Fri, 05 Jul 2019 10:17:25: #2 alternative fragment length(s) may be 2,123,486 bps INFO @ Fri, 05 Jul 2019 10:17:25: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.05_model.r INFO @ Fri, 05 Jul 2019 10:17:25: #3 Call peaks... INFO @ Fri, 05 Jul 2019 10:17:25: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 10:17:31: 129000000 INFO @ Fri, 05 Jul 2019 10:17:32: 115000000 INFO @ Fri, 05 Jul 2019 10:17:41: 130000000 INFO @ Fri, 05 Jul 2019 10:17:42: 116000000 INFO @ Fri, 05 Jul 2019 10:17:51: 131000000 INFO @ Fri, 05 Jul 2019 10:17:52: 117000000 INFO @ Fri, 05 Jul 2019 10:18:01: 132000000 INFO @ Fri, 05 Jul 2019 10:18:02: 118000000 INFO @ Fri, 05 Jul 2019 10:18:11: 133000000 INFO @ Fri, 05 Jul 2019 10:18:12: 119000000 INFO @ Fri, 05 Jul 2019 10:18:21: 134000000 INFO @ Fri, 05 Jul 2019 10:18:22: 120000000 INFO @ Fri, 05 Jul 2019 10:18:32: 135000000 INFO @ Fri, 05 Jul 2019 10:18:33: 121000000 INFO @ Fri, 05 Jul 2019 10:18:42: 136000000 INFO @ Fri, 05 Jul 2019 10:18:43: 122000000 INFO @ Fri, 05 Jul 2019 10:18:52: 137000000 INFO @ Fri, 05 Jul 2019 10:18:53: 123000000 INFO @ Fri, 05 Jul 2019 10:19:02: 138000000 INFO @ Fri, 05 Jul 2019 10:19:04: 124000000 INFO @ Fri, 05 Jul 2019 10:19:06: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 10:19:06: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 10:19:06: #1 total tags in treatment: 138238925 INFO @ Fri, 05 Jul 2019 10:19:06: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 10:19:06: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 10:19:10: #1 tags after filtering in treatment: 138238877 INFO @ Fri, 05 Jul 2019 10:19:10: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 10:19:10: #1 finished! INFO @ Fri, 05 Jul 2019 10:19:10: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 10:19:10: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 10:19:14: 125000000 INFO @ Fri, 05 Jul 2019 10:19:23: #2 number of paired peaks: 12461 INFO @ Fri, 05 Jul 2019 10:19:23: start model_add_line... INFO @ Fri, 05 Jul 2019 10:19:24: 126000000 INFO @ Fri, 05 Jul 2019 10:19:25: start X-correlation... INFO @ Fri, 05 Jul 2019 10:19:25: end of X-cor INFO @ Fri, 05 Jul 2019 10:19:25: #2 finished! INFO @ Fri, 05 Jul 2019 10:19:25: #2 predicted fragment length is 123 bps INFO @ Fri, 05 Jul 2019 10:19:25: #2 alternative fragment length(s) may be 2,123,486 bps INFO @ Fri, 05 Jul 2019 10:19:25: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.10_model.r INFO @ Fri, 05 Jul 2019 10:19:25: #3 Call peaks... INFO @ Fri, 05 Jul 2019 10:19:25: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 10:19:34: 127000000 INFO @ Fri, 05 Jul 2019 10:19:44: 128000000 INFO @ Fri, 05 Jul 2019 10:19:53: 129000000 INFO @ Fri, 05 Jul 2019 10:20:03: 130000000 INFO @ Fri, 05 Jul 2019 10:20:13: 131000000 INFO @ Fri, 05 Jul 2019 10:20:22: 132000000 INFO @ Fri, 05 Jul 2019 10:20:32: 133000000 INFO @ Fri, 05 Jul 2019 10:20:42: 134000000 INFO @ Fri, 05 Jul 2019 10:20:52: 135000000 INFO @ Fri, 05 Jul 2019 10:21:02: 136000000 INFO @ Fri, 05 Jul 2019 10:21:12: 137000000 INFO @ Fri, 05 Jul 2019 10:21:22: 138000000 INFO @ Fri, 05 Jul 2019 10:21:26: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 10:21:26: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 10:21:26: #1 total tags in treatment: 138238925 INFO @ Fri, 05 Jul 2019 10:21:26: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 10:21:26: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 10:21:29: #1 tags after filtering in treatment: 138238877 INFO @ Fri, 05 Jul 2019 10:21:29: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 10:21:29: #1 finished! INFO @ Fri, 05 Jul 2019 10:21:29: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 10:21:29: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 10:21:42: #2 number of paired peaks: 12461 INFO @ Fri, 05 Jul 2019 10:21:42: start model_add_line... INFO @ Fri, 05 Jul 2019 10:21:44: start X-correlation... INFO @ Fri, 05 Jul 2019 10:21:44: end of X-cor INFO @ Fri, 05 Jul 2019 10:21:44: #2 finished! INFO @ Fri, 05 Jul 2019 10:21:44: #2 predicted fragment length is 123 bps INFO @ Fri, 05 Jul 2019 10:21:44: #2 alternative fragment length(s) may be 2,123,486 bps INFO @ Fri, 05 Jul 2019 10:21:44: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.20_model.r INFO @ Fri, 05 Jul 2019 10:21:44: #3 Call peaks... INFO @ Fri, 05 Jul 2019 10:21:44: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 10:24:36: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 10:26:30: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 10:28:30: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.05_peaks.xls INFO @ Fri, 05 Jul 2019 10:28:30: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.05_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 10:28:30: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.05_summits.bed INFO @ Fri, 05 Jul 2019 10:28:31: Done! pass1 - making usageList (150 chroms): 9 millis pass2 - checking and writing primary data (22873 records, 4 fields): 43 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 10:28:42: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 10:30:16: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.10_peaks.xls INFO @ Fri, 05 Jul 2019 10:30:16: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.10_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 10:30:16: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.10_summits.bed INFO @ Fri, 05 Jul 2019 10:30:16: Done! pass1 - making usageList (88 chroms): 3 millis pass2 - checking and writing primary data (5578 records, 4 fields): 13 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 10:32:20: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.20_peaks.xls INFO @ Fri, 05 Jul 2019 10:32:20: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.20_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 10:32:20: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101862/ERX101862.20_summits.bed INFO @ Fri, 05 Jul 2019 10:32:20: Done! pass1 - making usageList (52 chroms): 1 millis pass2 - checking and writing primary data (1097 records, 4 fields): 6 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。