Job ID = 6459151 SRX = SRX6441120 Genome = dm6 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-21T13:00:05 prefetch.2.10.7: 1) Downloading 'SRR9680918'... 2020-06-21T13:00:05 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T13:00:50 prefetch.2.10.7: HTTPS download succeed 2020-06-21T13:00:51 prefetch.2.10.7: 'SRR9680918' is valid 2020-06-21T13:00:51 prefetch.2.10.7: 1) 'SRR9680918' was downloaded successfully 2020-06-21T13:00:51 prefetch.2.10.7: 'SRR9680918' has 0 unresolved dependencies Read 981069 spots for SRR9680918/SRR9680918.sra Written 981069 spots for SRR9680918/SRR9680918.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:00:56 981069 reads; of these: 981069 (100.00%) were paired; of these: 307920 (31.39%) aligned concordantly 0 times 613218 (62.51%) aligned concordantly exactly 1 time 59931 (6.11%) aligned concordantly >1 times ---- 307920 pairs aligned concordantly 0 times; of these: 54781 (17.79%) aligned discordantly 1 time ---- 253139 pairs aligned 0 times concordantly or discordantly; of these: 506278 mates make up the pairs; of these: 315169 (62.25%) aligned 0 times 168428 (33.27%) aligned exactly 1 time 22681 (4.48%) aligned >1 times 83.94% overall alignment rate Time searching: 00:00:56 Overall time: 00:00:56 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 1870 sequences. [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrUn_DS483755v1... [bam_rmdup_core] processing reference chrUn_DS483705v1... [bam_rmdup_core] processing reference chrUn_DS483873v1... [bam_rmdup_core] processing reference chrUn_DS485608v1... [bam_rmdup_core] processing reference chrUn_DS485979v1... [bam_rmdup_core] processing reference chrUn_DS485398v1... [bam_rmdup_core] processing reference chrUn_DS483906v1... [bam_rmdup_core] processing reference chrUn_DS485130v1... [bam_rmdup_core] processing reference chrUn_DS485859v1... [bam_rmdup_core] processing reference chrUn_DS485294v1... [bam_rmdup_core] processing reference chrUn_DS485246v1... [bam_rmdup_core] processing reference chrUn_DS485386v1... [bam_rmdup_core] processing reference chrUn_DS485280v1... [bam_rmdup_core] processing reference chrUn_DS484972v1... [bam_rmdup_core] processing reference chrUn_DS484407v1... [bam_rmdup_core] processing reference chrUn_DS484446v1... [bam_rmdup_core] processing reference chrUn_DS483748v1... [bam_rmdup_core] processing reference chrUn_DS484339v1... [bam_rmdup_core] processing reference chrUn_DS485150v1... [bam_rmdup_core] processing reference chrUn_DS485541v1... [bam_rmdup_core] processing reference chrUn_DS485296v1... [bam_rmdup_core] processing reference chrUn_DS483719v1... [bam_rmdup_core] processing reference chrUn_DS484052v1... [bam_rmdup_core] processing reference chrUn_DS484257v1... [bam_rmdup_core] processing reference chrUn_DS485376v1... [bam_rmdup_core] processing reference chrUn_DS484485v1... [bam_rmdup_core] processing reference chrUn_DS485572v1... [bam_rmdup_core] processing reference chrUn_DS485381v1... [bam_rmdup_core] processing reference chrUn_DS484707v1... [bam_rmdup_core] processing reference chrUn_DS485065v1... [bam_rmdup_core] processing reference chrUn_DS484756v1... [bam_rmdup_core] processing reference chrUn_DS484226v1... [bam_rmdup_core] processing reference chrUn_DS485451v1... [bam_rmdup_core] processing reference chrUn_DS485808v1... [bam_rmdup_core] processing reference chrUn_DS483723v1... [bam_rmdup_core] processing reference chrUn_DS485038v1... [bam_rmdup_core] processing reference chrUn_DS484496v1... [bam_rmdup_core] processing reference chrUn_DS483879v1... [bam_rmdup_core] processing reference chrUn_DS484100v1... [bam_rmdup_core] processing reference chrUn_DS485891v1... [bam_rmdup_core] processing reference chrUn_DS485387v1... [bam_rmdup_core] processing reference chrUn_DS485496v1... [bam_rmdup_core] processing reference chrUn_DS484904v1... [bam_rmdup_core] processing reference chrUn_DS485789v1... [bam_rmdup_core] processing reference chrUn_DS485333v1... [bam_rmdup_core] processing reference chrUn_DS485954v1... [bam_rmdup_core] processing reference chrUn_DS484567v1... [bam_rmdup_core] processing reference chrUn_DS484040v1... [bam_rmdup_core] processing reference chrUn_DS484751v1... [bam_rmdup_core] processing reference chrUn_DS485304v1... [bam_rmdup_core] processing reference chrUn_DS484470v1... [bam_rmdup_core] processing reference chrUn_DS485722v1... [bam_rmdup_core] processing reference chrUn_DS485872v1... [bam_rmdup_core] processing reference chrUn_DS483695v1... [bam_rmdup_core] processing reference chrUn_DS484096v1... [bam_rmdup_core] processing reference chrUn_DS485864v1... [bam_rmdup_core] processing reference chrUn_DS484493v1... [bam_rmdup_core] processing reference chrUn_DS484866v1... [bam_rmdup_core] processing reference chrUn_DS483736v1... [bam_rmdup_core] processing reference chrUn_DS485415v1... [bam_rmdup_core] processing reference chrUn_DS483901v1... [bam_rmdup_core] processing reference chrUn_DS484884v1... [bam_rmdup_core] processing reference chrUn_DS484515v1... [bam_rmdup_core] processing reference chrUn_DS483703v1... [bam_rmdup_core] processing reference chrUn_DS483933v1... [bam_rmdup_core] processing reference chrUn_DS485290v1... [bam_rmdup_core] processing reference chrUn_DS484481v1... [bam_rmdup_core] processing reference chrUn_DS485089v1... [bam_rmdup_core] processing reference chrUn_DS485985v1... [bam_rmdup_core] processing reference chrUn_DS485209v1... [bam_rmdup_core] processing reference chrUn_DS484210v1... [bam_rmdup_core] processing reference chrUn_DS485462v1... [bam_rmdup_core] processing reference chrUn_DS485501v1... [bam_rmdup_core] processing reference chrUn_DS485683v1... [bam_rmdup_core] processing reference chrUn_DS483682v1... [bam_rmdup_core] processing reference chrUn_DS485477v1... [bam_rmdup_core] processing reference chrUn_DS485102v1... [bam_rmdup_core] processing reference chrUn_DS483743v1... [bam_rmdup_core] processing reference chrUn_DS484728v1... [bam_rmdup_core] processing reference chrUn_DS485395v1... [bam_rmdup_core] processing reference chrUn_DS484443v1... [bam_rmdup_core] processing reference chrUn_DS483650v1... [bam_rmdup_core] processing reference chrUn_DS485498v1... [bam_rmdup_core] processing reference chrUn_DS485668v1... [bam_rmdup_core] processing reference chrUn_DS485751v1... [bam_rmdup_core] processing reference chrUn_DS484077v1... [bam_rmdup_core] processing reference chrUn_DS484985v1... [bam_rmdup_core] processing reference chrUn_DS485688v1... [bam_rmdup_core] processing reference chrUn_DS483680v1... [bam_rmdup_core] processing reference chrUn_DS485686v1... [bam_rmdup_core] processing reference chrUn_DS483845v1... [bam_rmdup_core] processing reference chrUn_DS484559v1... [bam_rmdup_core] processing reference chrUn_DS483914v1... [bam_rmdup_core] processing reference chrUn_DS485362v1... [bam_rmdup_core] processing reference chrUn_DS484102v1... [bam_rmdup_core] processing reference chrUn_DS485466v1... [bam_rmdup_core] processing reference chrUn_DS483805v1... [bam_rmdup_core] processing reference chrUn_DS484243v1... [bam_rmdup_core] processing reference chrUn_DS485905v1... [bam_rmdup_core] processing reference chrUn_DS485472v1... [bam_rmdup_core] processing reference chrUn_DS485826v1... [bam_rmdup_core] processing reference chrUn_DS484220v1... [bam_rmdup_core] processing reference chrUn_DS485059v1... [bam_rmdup_core] processing reference chrUn_DS485173v1... [bam_rmdup_core] processing reference chrUn_DS483759v1... [bam_rmdup_core] processing reference chrUn_DS483674v1... [bam_rmdup_core] processing reference chrUn_DS484721v1... [bam_rmdup_core] processing reference chrUn_DS485529v1... [bam_rmdup_core] processing reference chrUn_DS484445v1... [bam_rmdup_core] processing reference chrUn_DS485867v1... [bam_rmdup_core] processing reference chrUn_DS485509v1... [bam_rmdup_core] processing reference chrUn_DS484276v1... [bam_rmdup_core] processing reference chrUn_DS485005v1... [bam_rmdup_core] processing reference chrUn_DS483681v1... [bam_rmdup_core] processing reference chrUn_DS484916v1... [bam_rmdup_core] processing reference chrUn_DS484501v1... [bam_rmdup_core] processing reference chrUn_DS485991v1... [bam_rmdup_core] processing reference chrUn_DS484982v1... [bam_rmdup_core] processing reference chrUn_DS485622v1... [bam_rmdup_core] processing reference chrUn_DS485671v1... [bam_rmdup_core] processing reference chrUn_DS485820v1... [bam_rmdup_core] processing reference chrUn_DS484048v1... [bam_rmdup_core] processing reference chrUn_DS483693v1... [bam_rmdup_core] processing reference chrUn_DS484239v1... [bam_rmdup_core] processing reference chrUn_DS484274v1... [bam_rmdup_core] processing reference chrUn_DS485531v1... [bam_rmdup_core] processing reference chrUn_DS485494v1... [bam_rmdup_core] processing reference chrUn_DS484514v1... [bam_rmdup_core] processing reference chrUn_DS485453v1... [bam_rmdup_core] processing reference chrUn_DS484542v1... [bam_rmdup_core] processing reference chrUn_DS484487v1... [bam_rmdup_core] processing reference chrUn_DS484087v1... [bam_rmdup_core] processing reference chrUn_DS483919v1... [bam_rmdup_core] processing reference chrUn_DS484748v1... [bam_rmdup_core] processing reference chrUn_DS484312v1... [bam_rmdup_core] processing reference chrUn_DS484315v1... [bam_rmdup_core] processing reference chrUn_DS484027v1... [bam_rmdup_core] processing reference chrUn_DS485847v1... [bam_rmdup_core] processing reference chrUn_DS483734v1... [bam_rmdup_core] processing reference chrUn_DS484510v1... [bam_rmdup_core] processing reference chrUn_DS484155v1... [bam_rmdup_core] processing reference chrUn_DS485007v1... [bam_rmdup_core] processing reference chrUn_DS485544v1... [bam_rmdup_core] processing reference chrUn_DS484651v1... [bam_rmdup_core] processing reference chrUn_DS485968v1... [bam_rmdup_core] processing reference chrUn_DS484962v1... [bam_rmdup_core] processing reference chrUn_DS483739v1... [bam_rmdup_core] processing reference chrUn_DS485903v1... [bam_rmdup_core] processing reference chrUn_DS484984v1... [bam_rmdup_core] processing reference chrUn_DS485666v1... [bam_rmdup_core] processing reference chrUn_DS483848v1... [bam_rmdup_core] processing reference chrUn_DS484886v1... [bam_rmdup_core] processing reference chrUn_DS485264v1... [bam_rmdup_core] processing reference chrUn_DS484149v1... [bam_rmdup_core] processing reference chrUn_DS485053v1... [bam_rmdup_core] processing reference chrUn_DS484847v1... [bam_rmdup_core] processing reference chrUn_DS485521v1... [bam_rmdup_core] processing reference chrUn_DS483675v1... [bam_rmdup_core] processing reference chrUn_DS485571v1... [bam_rmdup_core] processing reference chrUn_DS484954v1... [bam_rmdup_core] processing reference chrUn_DS484852v1... [bam_rmdup_core] processing reference chrUn_DS483769v1... [bam_rmdup_core] processing reference chrUn_DS485228v1... [bam_rmdup_core] processing reference chrUn_DS483804v1... [bam_rmdup_core] processing reference chrUn_DS484169v1... [bam_rmdup_core] processing reference chrUn_DS484253v1... [bam_rmdup_core] processing reference chrUn_DS484882v1... [bam_rmdup_core] processing reference chrUn_DS483686v1... [bam_rmdup_core] processing reference chrUn_DS485434v1... [bam_rmdup_core] processing reference chrUn_DS484003v1... [bam_rmdup_core] processing reference chrUn_DS483965v1... [bam_rmdup_core] processing reference chrUn_DS485947v1... [bam_rmdup_core] processing reference chrUn_DS485194v1... [bam_rmdup_core] processing reference chrUn_DS484283v1... [bam_rmdup_core] processing reference chrUn_DS484183v1... [bam_rmdup_core] processing reference chrUn_DS484499v1... [bam_rmdup_core] processing reference chrUn_DS485587v1... [bam_rmdup_core] processing reference chrUn_DS484425v1... [bam_rmdup_core] processing reference chrUn_DS485538v1... [bam_rmdup_core] processing reference chrUn_DS483872v1... [bam_rmdup_core] processing reference chrUn_DS485482v1... [bam_rmdup_core] processing reference chrUn_DS485031v1... [bam_rmdup_core] processing reference chrUn_DS484254v1... [bam_rmdup_core] processing reference chrUn_DS484503v1... [bam_rmdup_core] processing reference chrUn_DS485004v1... [bam_rmdup_core] processing reference chrUn_DS485046v1... [bam_rmdup_core] processing reference chrUn_DS485200v1... [bam_rmdup_core] processing reference chrUn_DS485833v1... [bam_rmdup_core] processing reference chrUn_DS485944v1... [bam_rmdup_core] processing reference chrUn_DS485714v1... [bam_rmdup_core] processing reference chrUn_DS483913v1... [bam_rmdup_core] processing reference chrUn_DS484348v1... [bam_rmdup_core] processing reference chrUn_DS485032v1... [bam_rmdup_core] processing reference chrUn_DS483867v1... [bam_rmdup_core] processing reference chrUn_DS483746v1... [bam_rmdup_core] processing reference chrUn_DS483816v1... [bam_rmdup_core] processing reference chrUn_DS484458v1... [bam_rmdup_core] processing reference chrUn_DS485918v1... [bam_rmdup_core] processing reference chrUn_DS483953v1... [bam_rmdup_core] processing reference chrUn_DS484557v1... [bam_rmdup_core] processing reference chrUn_DS485610v1... [bam_rmdup_core] processing reference chrUn_DS484267v1... [bam_rmdup_core] processing reference chrUn_DS485525v1... [bam_rmdup_core] processing reference chrUn_DS483945v1... [bam_rmdup_core] processing reference chrUn_DS485792v1... [bam_rmdup_core] processing reference chrUn_DS485389v1... [bam_rmdup_core] processing reference chrUn_DS483702v1... [bam_rmdup_core] processing reference chrUn_DS483868v1... [bam_rmdup_core] processing reference chrUn_DS484015v1... [bam_rmdup_core] processing reference chrUn_DS484424v1... [bam_rmdup_core] processing reference chrUn_DS484221v1... [bam_rmdup_core] processing reference chrUn_DS484159v1... [bam_rmdup_core] processing reference chrUn_DS484107v1... [bam_rmdup_core] processing reference chrUn_DS484602v1... [bam_rmdup_core] processing reference chrUn_DS484335v1... [bam_rmdup_core] processing reference chrUn_DS485169v1... [bam_rmdup_core] processing reference chrUn_DS483768v1... [bam_rmdup_core] processing reference chrUn_DS484097v1... [bam_rmdup_core] processing reference chrUn_DS483649v1... [bam_rmdup_core] processing reference chrUn_DS484079v1... [bam_rmdup_core] processing reference chrUn_DS484521v1... [bam_rmdup_core] processing reference chrUn_DS483863v1... [bam_rmdup_core] processing reference chrUn_DS485624v1... [bam_rmdup_core] processing reference chrUn_DS484573v1... [bam_rmdup_core] processing reference chrUn_DS483994v1... [bam_rmdup_core] processing reference chrUn_DS484013v1... [bam_rmdup_core] processing reference chrUn_DS484649v1... [bam_rmdup_core] processing reference chrUn_DS485107v1... [bam_rmdup_core] processing reference chrUn_DS484007v1... [bam_rmdup_core] processing reference chrUn_DS484230v1... [bam_rmdup_core] processing reference chrUn_DS483898v1... [bam_rmdup_core] processing reference chrUn_DS483762v1... [bam_rmdup_core] processing reference chrUn_DS483943v1... [bam_rmdup_core] processing reference chrUn_DS484144v1... [bam_rmdup_core] processing reference chrUn_DS483865v1... [bam_rmdup_core] processing reference chrUn_DS484090v1... [bam_rmdup_core] processing reference chrUn_DS483757v1... [bam_rmdup_core] processing reference chrUn_DS484280v1... [bam_rmdup_core] processing reference chrUn_DS484167v1... [bam_rmdup_core] processing reference chrUn_DS483918v1... [bam_rmdup_core] processing reference chrUn_DS483770v1... [bam_rmdup_core] processing reference chrUn_DS484018v1... [bam_rmdup_core] processing reference chrUn_DS483999v1... [bam_rmdup_core] processing reference chrUn_DS484256v1... [bam_rmdup_core] processing reference chrUn_DS484539v1... [bam_rmdup_core] processing reference chrUn_DS483937v1... [bam_rmdup_core] processing reference chrUn_DS483832v1... [bam_rmdup_core] processing reference chrUn_DS484386v1... [bam_rmdup_core] processing reference chrUn_DS484426v1... [bam_rmdup_core] processing reference chrUn_DS483763v1... [bam_rmdup_core] processing reference chrUn_DS483910v1... [bam_rmdup_core] processing reference chrUn_DS483754v1... [bam_rmdup_core] processing reference chrUn_DS483758v1... [bam_rmdup_core] processing reference chrUn_DS483846v1... [bam_rmdup_core] processing reference chrUn_DS483874v1... [bam_rmdup_core] processing reference chrUn_CP007071v1... [bam_rmdup_core] processing reference chrUn_CP007072v1... [bam_rmdup_core] processing reference chrUn_CP007073v1... [bam_rmdup_core] processing reference chrUn_CP007074v1... [bam_rmdup_core] processing reference chrUn_CP007076v1... [bam_rmdup_core] processing reference chrUn_CP007078v1... [bam_rmdup_core] processing reference chrUn_CP007079v1... [bam_rmdup_core] processing reference chrUn_CP007082v1... [bam_rmdup_core] processing reference chrUn_CP007084v1... [bam_rmdup_core] processing reference chrUn_CP007085v1... [bam_rmdup_core] processing reference chrUn_CP007087v1... [bam_rmdup_core] processing reference chrUn_CP007088v1... [bam_rmdup_core] processing reference chrUn_CP007089v1... [bam_rmdup_core] processing reference chrUn_CP007090v1... [bam_rmdup_core] processing reference chrUn_CP007091v1... [bam_rmdup_core] processing reference chrUn_CP007092v1... [bam_rmdup_core] processing reference chrUn_CP007093v1... [bam_rmdup_core] processing reference chrUn_CP007094v1... [bam_rmdup_core] processing reference chrUn_CP007095v1... [bam_rmdup_core] processing reference chrUn_CP007080v1... [bam_rmdup_core] processing reference chrUn_CP007097v1... [bam_rmdup_core] processing reference chrUn_CP007098v1... [bam_rmdup_core] processing reference chrUn_CP007099v1... [bam_rmdup_core] processing reference chrUn_CP007100v1... [bam_rmdup_core] processing reference chrUn_CP007101v1... [bam_rmdup_core] processing reference chrUn_CP007081v1... [bam_rmdup_core] processing reference chrUn_CP007105v1... [bam_rmdup_core] processing reference chrUn_DS483562v1... [bam_rmdup_core] processing reference chrUn_CP007120v1... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrX_DS484968v1_random... [bam_rmdup_core] processing reference chrX_DS484668v1_random... [bam_rmdup_core] processing reference chrX_DS484664v1_random... [bam_rmdup_core] processing reference chrX_DS484272v1_random... [bam_rmdup_core] processing reference chrX_DS484161v1_random... [bam_rmdup_core] processing reference chrX_DS484459v1_random... [bam_rmdup_core] processing reference chrX_DS484765v1_random... [bam_rmdup_core] processing reference chrX_DS484622v1_random... [bam_rmdup_core] processing reference chrX_DS484507v1_random... [bam_rmdup_core] processing reference chrX_DS484074v1_random... [bam_rmdup_core] processing reference chrX_DS484367v1_random... [bam_rmdup_core] processing reference chrX_DS484730v1_random... [bam_rmdup_core] processing reference chrX_DS484582v1_random... [bam_rmdup_core] processing reference chrX_DS484529v1_random... [bam_rmdup_core] processing reference chrX_DS484518v1_random... [bam_rmdup_core] processing reference chrX_DS484833v1_random... [bam_rmdup_core] processing reference chrX_DS485606v1_random... [bam_rmdup_core] processing reference chrX_DS484358v1_random... [bam_rmdup_core] processing reference chrX_DS484430v1_random... [bam_rmdup_core] processing reference chrX_DS484583v1_random... [bam_rmdup_core] processing reference chrX_DS484428v1_random... [bam_rmdup_core] processing reference chrX_DS485266v1_random... [bam_rmdup_core] processing reference chrX_DS484012v1_random... [bam_rmdup_core] processing reference chrX_DS484576v1_random... [bam_rmdup_core] processing reference chrX_DS484803v1_random... [bam_rmdup_core] processing reference chrX_DS484533v1_random... [bam_rmdup_core] processing reference chrX_DS484450v1_random... [bam_rmdup_core] processing reference chrX_DS484610v1_random... [bam_rmdup_core] processing reference chrX_DS484558v1_random... [bam_rmdup_core] processing reference chrX_DS484679v1_random... [bam_rmdup_core] processing reference chrX_DS484235v1_random... [bam_rmdup_core] processing reference chrX_DS484961v1_random... [bam_rmdup_core] processing reference chrX_DS483648v1_random... [bam_rmdup_core] processing reference chrX_DS485813v1_random... [bam_rmdup_core] processing reference chrX_DS484023v1_random... [bam_rmdup_core] processing reference chrX_DS484401v1_random... [bam_rmdup_core] processing reference chrX_DS484995v1_random... [bam_rmdup_core] processing reference chrX_DS484393v1_random... [bam_rmdup_core] processing reference chrX_DS484911v1_random... [bam_rmdup_core] processing reference chrX_DS484362v1_random... [bam_rmdup_core] processing reference chrX_DS484261v1_random... [bam_rmdup_core] processing reference chrX_DS484609v1_random... [bam_rmdup_core] processing reference chrX_DS484397v1_random... [bam_rmdup_core] processing reference chrX_DS484198v1_random... [bam_rmdup_core] processing reference chrX_DS484364v1_random... [bam_rmdup_core] processing reference chrX_DS485110v1_random... [bam_rmdup_core] processing reference chrX_DS484182v1_random... [bam_rmdup_core] processing reference chrX_DS485126v1_random... [bam_rmdup_core] processing reference chrX_DS485691v1_random... [bam_rmdup_core] processing reference chrX_DS485801v1_random... [bam_rmdup_core] processing reference chrX_DS485845v1_random... [bam_rmdup_core] processing reference chrX_DS484101v1_random... [bam_rmdup_core] processing reference chrX_DS484555v1_random... [bam_rmdup_core] processing reference chrX_DS484569v1_random... [bam_rmdup_core] processing reference chrX_DS484648v1_random... [bam_rmdup_core] processing reference chrX_DS484483v1_random... [bam_rmdup_core] processing reference chrX_DS484633v1_random... [bam_rmdup_core] processing reference chrX_DS484136v1_random... [bam_rmdup_core] processing reference chrX_DS484837v1_random... [bam_rmdup_core] processing reference chrX_DS484644v1_random... [bam_rmdup_core] processing reference chrX_DS484731v1_random... [bam_rmdup_core] processing reference chrX_DS484768v1_random... [bam_rmdup_core] processing reference chrX_DS484611v1_random... [bam_rmdup_core] processing reference chrX_DS484519v1_random... [bam_rmdup_core] processing reference chrX_DS485599v1_random... [bam_rmdup_core] processing reference chrX_DS485111v1_random... [bam_rmdup_core] processing reference chrX_DS484305v1_random... [bam_rmdup_core] processing reference chrX_DS484597v1_random... [bam_rmdup_core] processing reference chrX_DS483669v1_random... [bam_rmdup_core] processing reference chrX_DS483655v1_random... [bam_rmdup_core] processing reference chrX_DS484725v1_random... [bam_rmdup_core] processing reference chrX_DS484599v1_random... [bam_rmdup_core] processing reference chrX_DS484357v1_random... [bam_rmdup_core] processing reference chrX_DS485537v1_random... [bam_rmdup_core] processing reference chrX_DS484057v1_random... [bam_rmdup_core] processing reference chrX_DS485899v1_random... [bam_rmdup_core] processing reference chrX_DS485950v1_random... [bam_rmdup_core] processing reference chrX_DS484541v1_random... [bam_rmdup_core] processing reference chrX_DS484669v1_random... [bam_rmdup_core] processing reference chrX_DS484162v1_random... [bam_rmdup_core] processing reference chrX_DS484603v1_random... [bam_rmdup_core] processing reference chrX_DS485351v1_random... [bam_rmdup_core] processing reference chrX_DS484702v1_random... [bam_rmdup_core] processing reference chrX_DS484826v1_random... [bam_rmdup_core] processing reference chrX_DS483665v1_random... [bam_rmdup_core] processing reference chrX_DS484067v1_random... [bam_rmdup_core] processing reference chrX_DS485672v1_random... [bam_rmdup_core] processing reference chrX_DS484005v1_random... [bam_rmdup_core] processing reference chrX_DS485303v1_random... [bam_rmdup_core] processing reference chrX_DS484346v1_random... [bam_rmdup_core] processing reference chrX_DS484319v1_random... [bam_rmdup_core] processing reference chrX_DS485225v1_random... [bam_rmdup_core] processing reference chrX_DS485268v1_random... [bam_rmdup_core] processing reference chrX_DS484715v1_random... [bam_rmdup_core] processing reference chrX_DS485454v1_random... [bam_rmdup_core] processing reference chrX_DS483784v1_random... [bam_rmdup_core] processing reference chrX_DS485119v1_random... [bam_rmdup_core] processing reference chrX_DS484088v1_random... [bam_rmdup_core] processing reference chrX_DS483685v1_random... [bam_rmdup_core] processing reference chrX_DS484749v1_random... [bam_rmdup_core] processing reference chrX_DS483843v1_random... [bam_rmdup_core] processing reference chrX_DS483955v1_random... [bam_rmdup_core] processing reference chrX_DS484417v1_random... [bam_rmdup_core] processing reference chrX_DS485201v1_random... [bam_rmdup_core] processing reference chrX_DS484990v1_random... [bam_rmdup_core] processing reference chrX_DS483888v1_random... [bam_rmdup_core] processing reference chrX_DS483660v1_random... [bam_rmdup_core] processing reference chrX_DS484615v1_random... [bam_rmdup_core] processing reference chrX_DS484216v1_random... [bam_rmdup_core] processing reference chrX_DS484185v1_random... [bam_rmdup_core] processing reference chrX_DS483666v1_random... [bam_rmdup_core] processing reference chrX_DS484316v1_random... [bam_rmdup_core] processing reference chrX_DS483803v1_random... [bam_rmdup_core] processing reference chrX_DS483885v1_random... [bam_rmdup_core] processing reference chrX_DS483928v1_random... [bam_rmdup_core] processing reference chrX_DS484326v1_random... [bam_rmdup_core] processing reference chrX_DS484075v1_random... [bam_rmdup_core] processing reference chrX_DS483948v1_random... [bam_rmdup_core] processing reference chrX_DS484081v1_random... [bam_rmdup_core] processing reference chrX_DS484586v1_random... [bam_rmdup_core] processing reference chrX_DS484133v1_random... [bam_rmdup_core] processing reference chrX_DS483909v1_random... [bam_rmdup_core] processing reference chrX_DS483903v1_random... [bam_rmdup_core] processing reference chrX_DS483926v1_random... [bam_rmdup_core] processing reference chrX_DS483923v1_random... [bam_rmdup_core] processing reference chrX_DS484099v1_random... [bam_rmdup_core] processing reference chrX_DS483821v1_random... [bam_rmdup_core] processing reference chrX_DS484562v1_random... [bam_rmdup_core] processing reference chrX_CP007104v1_random... [bam_rmdup_core] processing reference chrX_CP007103v1_random... [bam_rmdup_core] processing reference chrY... [bam_rmdup_core] processing reference chrY_DS485113v1_random... [bam_rmdup_core] processing reference chrY_DS484142v1_random... [bam_rmdup_core] processing reference chrY_DS485375v1_random... [bam_rmdup_core] processing reference chrY_DS485865v1_random... [bam_rmdup_core] processing reference chrY_DS485795v1_random... [bam_rmdup_core] processing reference chrY_DS484681v1_random... [bam_rmdup_core] processing reference chrY_DS484250v1_random... [bam_rmdup_core] processing reference chrY_DS485070v1_random... [bam_rmdup_core] processing reference chrY_DS485051v1_random... [bam_rmdup_core] processing reference chrY_DS485561v1_random... [bam_rmdup_core] processing reference chrY_DS485894v1_random... [bam_rmdup_core] processing reference chrY_DS484631v1_random... [bam_rmdup_core] processing reference chrY_DS485492v1_random... [bam_rmdup_core] processing reference chrY_DS485575v1_random... [bam_rmdup_core] processing reference chrY_DS485696v1_random... [bam_rmdup_core] processing reference chrY_DS485752v1_random... [bam_rmdup_core] processing reference chrY_DS485560v1_random... [bam_rmdup_core] processing reference chrY_DS483967v1_random... [bam_rmdup_core] processing reference chrY_DS484680v1_random... [bam_rmdup_core] processing reference chrY_DS484063v1_random... [bam_rmdup_core] processing reference chrY_DS483790v1_random... [bam_rmdup_core] processing reference chrY_DS485888v1_random... [bam_rmdup_core] processing reference chrY_DS484531v1_random... [bam_rmdup_core] processing reference chrY_DS483931v1_random... [bam_rmdup_core] processing reference chrY_DS483996v1_random... [bam_rmdup_core] processing reference chrY_CP007109v1_random... [bam_rmdup_core] processing reference chrY_CP007110v1_random... [bam_rmdup_core] processing reference chrY_CP007111v1_random... [bam_rmdup_core] processing reference chrY_CP007112v1_random... [bam_rmdup_core] processing reference chrY_CP007113v1_random... [bam_rmdup_core] processing reference chrY_CP007114v1_random... [bam_rmdup_core] processing reference chrY_CP007115v1_random... [bam_rmdup_core] processing reference chrY_CP007117v1_random... [bam_rmdup_core] processing reference chrY_CP007118v1_random... [bam_rmdup_core] processing reference chrY_CP007107v1_random... [bam_rmdup_core] processing reference chrY_CP007108v1_random... [bam_rmdup_core] 515428 / 725486 = 0.7105 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 22:02:48: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 22:02:48: #1 read tag files... INFO @ Sun, 21 Jun 2020 22:02:48: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 22:02:52: #1 tag size is determined as 75 bps INFO @ Sun, 21 Jun 2020 22:02:52: #1 tag size = 75 INFO @ Sun, 21 Jun 2020 22:02:52: #1 total tags in treatment: 190180 INFO @ Sun, 21 Jun 2020 22:02:52: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 22:02:52: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 22:02:52: #1 tags after filtering in treatment: 151642 INFO @ Sun, 21 Jun 2020 22:02:52: #1 Redundant rate of treatment: 0.20 INFO @ Sun, 21 Jun 2020 22:02:52: #1 finished! INFO @ Sun, 21 Jun 2020 22:02:52: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 22:02:52: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 22:02:52: #2 number of paired peaks: 6504 INFO @ Sun, 21 Jun 2020 22:02:52: start model_add_line... INFO @ Sun, 21 Jun 2020 22:02:52: start X-correlation... INFO @ Sun, 21 Jun 2020 22:02:52: end of X-cor INFO @ Sun, 21 Jun 2020 22:02:52: #2 finished! INFO @ Sun, 21 Jun 2020 22:02:52: #2 predicted fragment length is 286 bps INFO @ Sun, 21 Jun 2020 22:02:52: #2 alternative fragment length(s) may be 6,249,286 bps INFO @ Sun, 21 Jun 2020 22:02:52: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.05_model.r INFO @ Sun, 21 Jun 2020 22:02:52: #3 Call peaks... INFO @ Sun, 21 Jun 2020 22:02:52: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 22:02:53: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 22:02:53: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.05_peaks.xls INFO @ Sun, 21 Jun 2020 22:02:53: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.05_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 22:02:53: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.05_summits.bed INFO @ Sun, 21 Jun 2020 22:02:53: Done! pass1 - making usageList (16 chroms): 1 millis pass2 - checking and writing primary data (273 records, 4 fields): 1 millis CompletedMACS2peakCalling WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 22:03:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 22:03:18: #1 read tag files... INFO @ Sun, 21 Jun 2020 22:03:18: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 22:03:22: #1 tag size is determined as 75 bps INFO @ Sun, 21 Jun 2020 22:03:22: #1 tag size = 75 INFO @ Sun, 21 Jun 2020 22:03:22: #1 total tags in treatment: 190180 INFO @ Sun, 21 Jun 2020 22:03:22: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 22:03:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 22:03:22: #1 tags after filtering in treatment: 151642 INFO @ Sun, 21 Jun 2020 22:03:22: #1 Redundant rate of treatment: 0.20 INFO @ Sun, 21 Jun 2020 22:03:22: #1 finished! INFO @ Sun, 21 Jun 2020 22:03:22: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 22:03:22: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 22:03:22: #2 number of paired peaks: 6504 INFO @ Sun, 21 Jun 2020 22:03:22: start model_add_line... INFO @ Sun, 21 Jun 2020 22:03:22: start X-correlation... INFO @ Sun, 21 Jun 2020 22:03:22: end of X-cor INFO @ Sun, 21 Jun 2020 22:03:22: #2 finished! INFO @ Sun, 21 Jun 2020 22:03:22: #2 predicted fragment length is 286 bps INFO @ Sun, 21 Jun 2020 22:03:22: #2 alternative fragment length(s) may be 6,249,286 bps INFO @ Sun, 21 Jun 2020 22:03:22: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.10_model.r INFO @ Sun, 21 Jun 2020 22:03:22: #3 Call peaks... INFO @ Sun, 21 Jun 2020 22:03:22: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 22:03:23: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 22:03:23: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.10_peaks.xls INFO @ Sun, 21 Jun 2020 22:03:23: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.10_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 22:03:23: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.10_summits.bed INFO @ Sun, 21 Jun 2020 22:03:23: Done! pass1 - making usageList (12 chroms): 1 millis pass2 - checking and writing primary data (96 records, 4 fields): 1 millis CompletedMACS2peakCalling BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 22:03:48: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 22:03:48: #1 read tag files... INFO @ Sun, 21 Jun 2020 22:03:48: #1 read treatment tags... BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。 INFO @ Sun, 21 Jun 2020 22:03:52: #1 tag size is determined as 75 bps INFO @ Sun, 21 Jun 2020 22:03:52: #1 tag size = 75 INFO @ Sun, 21 Jun 2020 22:03:52: #1 total tags in treatment: 190180 INFO @ Sun, 21 Jun 2020 22:03:52: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 22:03:52: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 22:03:52: #1 tags after filtering in treatment: 151642 INFO @ Sun, 21 Jun 2020 22:03:52: #1 Redundant rate of treatment: 0.20 INFO @ Sun, 21 Jun 2020 22:03:52: #1 finished! INFO @ Sun, 21 Jun 2020 22:03:52: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 22:03:52: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 22:03:52: #2 number of paired peaks: 6504 INFO @ Sun, 21 Jun 2020 22:03:52: start model_add_line... INFO @ Sun, 21 Jun 2020 22:03:52: start X-correlation... INFO @ Sun, 21 Jun 2020 22:03:52: end of X-cor INFO @ Sun, 21 Jun 2020 22:03:52: #2 finished! INFO @ Sun, 21 Jun 2020 22:03:52: #2 predicted fragment length is 286 bps INFO @ Sun, 21 Jun 2020 22:03:52: #2 alternative fragment length(s) may be 6,249,286 bps INFO @ Sun, 21 Jun 2020 22:03:52: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.20_model.r INFO @ Sun, 21 Jun 2020 22:03:52: #3 Call peaks... INFO @ Sun, 21 Jun 2020 22:03:52: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 22:03:53: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 22:03:53: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.20_peaks.xls INFO @ Sun, 21 Jun 2020 22:03:53: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.20_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 22:03:53: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX6441120/SRX6441120.20_summits.bed INFO @ Sun, 21 Jun 2020 22:03:53: Done! pass1 - making usageList (11 chroms): 1 millis pass2 - checking and writing primary data (27 records, 4 fields): 1 millis CompletedMACS2peakCalling