Job ID = 6459139 SRX = SRX6441111 Genome = dm6 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-21T13:01:46 prefetch.2.10.7: 1) Downloading 'SRR9680909'... 2020-06-21T13:01:46 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T13:02:30 prefetch.2.10.7: HTTPS download succeed 2020-06-21T13:02:30 prefetch.2.10.7: 'SRR9680909' is valid 2020-06-21T13:02:30 prefetch.2.10.7: 1) 'SRR9680909' was downloaded successfully 2020-06-21T13:02:30 prefetch.2.10.7: 'SRR9680909' has 0 unresolved dependencies Read 581272 spots for SRR9680909/SRR9680909.sra Written 581272 spots for SRR9680909/SRR9680909.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:00:44 581272 reads; of these: 581272 (100.00%) were paired; of these: 113105 (19.46%) aligned concordantly 0 times 384412 (66.13%) aligned concordantly exactly 1 time 83755 (14.41%) aligned concordantly >1 times ---- 113105 pairs aligned concordantly 0 times; of these: 18894 (16.70%) aligned discordantly 1 time ---- 94211 pairs aligned 0 times concordantly or discordantly; of these: 188422 mates make up the pairs; of these: 129146 (68.54%) aligned 0 times 40805 (21.66%) aligned exactly 1 time 18471 (9.80%) aligned >1 times 88.89% overall alignment rate Time searching: 00:00:44 Overall time: 00:00:44 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 1870 sequences. [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrUn_DS483755v1... [bam_rmdup_core] processing reference chrUn_DS483873v1... [bam_rmdup_core] processing reference chrUn_DS485608v1... [bam_rmdup_core] processing reference chrUn_DS485979v1... [bam_rmdup_core] processing reference chrUn_DS485398v1... [bam_rmdup_core] processing reference chrUn_DS483906v1... [bam_rmdup_core] processing reference chrUn_DS484489v1... [bam_rmdup_core] processing reference chrUn_DS485495v1... [bam_rmdup_core] processing reference chrUn_DS485130v1... [bam_rmdup_core] processing reference chrUn_DS485995v1... [bam_rmdup_core] processing reference chrUn_DS485433v1... [bam_rmdup_core] processing reference chrUn_DS485984v1... [bam_rmdup_core] processing reference chrUn_DS485859v1... [bam_rmdup_core] processing reference chrUn_DS484058v1... [bam_rmdup_core] processing reference chrUn_DS485294v1... [bam_rmdup_core] processing reference chrUn_DS484855v1... [bam_rmdup_core] processing reference chrUn_DS485246v1... [bam_rmdup_core] processing reference chrUn_DS485386v1... [bam_rmdup_core] processing reference chrUn_DS485354v1... [bam_rmdup_core] processing reference chrUn_DS483728v1... [bam_rmdup_core] processing reference chrUn_DS485783v1... [bam_rmdup_core] processing reference chrUn_DS484407v1... [bam_rmdup_core] processing reference chrUn_DS484446v1... [bam_rmdup_core] processing reference chrUn_DS483748v1... [bam_rmdup_core] processing reference chrUn_DS483711v1... [bam_rmdup_core] processing reference chrUn_DS484339v1... [bam_rmdup_core] processing reference chrUn_DS484689v1... [bam_rmdup_core] processing reference chrUn_DS485822v1... [bam_rmdup_core] processing reference chrUn_DS485541v1... [bam_rmdup_core] processing reference chrUn_DS485421v1... [bam_rmdup_core] processing reference chrUn_DS485296v1... [bam_rmdup_core] processing reference chrUn_DS483719v1... [bam_rmdup_core] processing reference chrUn_DS484052v1... [bam_rmdup_core] processing reference chrUn_DS485073v1... [bam_rmdup_core] processing reference chrUn_DS484257v1... [bam_rmdup_core] processing reference chrUn_DS485376v1... [bam_rmdup_core] processing reference chrUn_DS484485v1... [bam_rmdup_core] processing reference chrUn_DS485572v1... [bam_rmdup_core] processing reference chrUn_DS484707v1... [bam_rmdup_core] processing reference chrUn_DS484546v1... [bam_rmdup_core] processing reference chrUn_DS485846v1... [bam_rmdup_core] processing reference chrUn_DS484756v1... [bam_rmdup_core] processing reference chrUn_DS484226v1... [bam_rmdup_core] processing reference chrUn_DS485451v1... [bam_rmdup_core] processing reference chrUn_DS484304v1... [bam_rmdup_core] processing reference chrUn_DS485808v1... [bam_rmdup_core] processing reference chrUn_DS483877v1... [bam_rmdup_core] processing reference chrUn_DS483723v1... [bam_rmdup_core] processing reference chrUn_DS485038v1... [bam_rmdup_core] processing reference chrUn_DS485673v1... [bam_rmdup_core] processing reference chrUn_DS483879v1... [bam_rmdup_core] processing reference chrUn_DS485907v1... [bam_rmdup_core] processing reference chrUn_DS484100v1... [bam_rmdup_core] processing reference chrUn_DS486008v1... [bam_rmdup_core] processing reference chrUn_DS485891v1... [bam_rmdup_core] processing reference chrUn_DS484329v1... [bam_rmdup_core] processing reference chrUn_DS483692v1... [bam_rmdup_core] processing reference chrUn_DS485387v1... [bam_rmdup_core] processing reference chrUn_DS485496v1... [bam_rmdup_core] processing reference chrUn_DS484904v1... [bam_rmdup_core] processing reference chrUn_DS483707v1... [bam_rmdup_core] processing reference chrUn_DS485789v1... [bam_rmdup_core] processing reference chrUn_DS485954v1... [bam_rmdup_core] processing reference chrUn_DS484202v1... [bam_rmdup_core] processing reference chrUn_DS485825v1... [bam_rmdup_core] processing reference chrUn_DS485285v1... [bam_rmdup_core] processing reference chrUn_DS485313v1... [bam_rmdup_core] processing reference chrUn_DS484567v1... [bam_rmdup_core] processing reference chrUn_DS484040v1... [bam_rmdup_core] processing reference chrUn_DS485711v1... [bam_rmdup_core] processing reference chrUn_DS485475v1... [bam_rmdup_core] processing reference chrUn_DS484751v1... [bam_rmdup_core] processing reference chrUn_DS484277v1... [bam_rmdup_core] processing reference chrUn_DS485304v1... [bam_rmdup_core] processing reference chrUn_DS485794v1... [bam_rmdup_core] processing reference chrUn_DS484470v1... [bam_rmdup_core] processing reference chrUn_DS484303v1... [bam_rmdup_core] processing reference chrUn_DS484720v1... [bam_rmdup_core] processing reference chrUn_DS484522v1... [bam_rmdup_core] processing reference chrUn_DS485821v1... [bam_rmdup_core] processing reference chrUn_DS485872v1... [bam_rmdup_core] processing reference chrUn_DS484190v1... [bam_rmdup_core] processing reference chrUn_DS484096v1... [bam_rmdup_core] processing reference chrUn_DS485659v1... [bam_rmdup_core] processing reference chrUn_DS484993v1... [bam_rmdup_core] processing reference chrUn_DS484896v1... [bam_rmdup_core] processing reference chrUn_DS485047v1... [bam_rmdup_core] processing reference chrUn_DS484069v1... [bam_rmdup_core] processing reference chrUn_DS484493v1... [bam_rmdup_core] processing reference chrUn_DS484772v1... [bam_rmdup_core] processing reference chrUn_DS484727v1... [bam_rmdup_core] processing reference chrUn_DS485810v1... [bam_rmdup_core] processing reference chrUn_DS483736v1... [bam_rmdup_core] processing reference chrUn_DS485415v1... [bam_rmdup_core] processing reference chrUn_DS484275v1... [bam_rmdup_core] processing reference chrUn_DS483901v1... [bam_rmdup_core] processing reference chrUn_DS484884v1... [bam_rmdup_core] processing reference chrUn_DS484515v1... [bam_rmdup_core] processing reference chrUn_DS483703v1... [bam_rmdup_core] processing reference chrUn_DS485311v1... [bam_rmdup_core] processing reference chrUn_DS485290v1... [bam_rmdup_core] processing reference chrUn_DS484481v1... [bam_rmdup_core] processing reference chrUn_DS484976v1... [bam_rmdup_core] processing reference chrUn_DS485089v1... [bam_rmdup_core] processing reference chrUn_DS485753v1... [bam_rmdup_core] processing reference chrUn_DS484776v1... [bam_rmdup_core] processing reference chrUn_DS483864v1... [bam_rmdup_core] processing reference chrUn_DS485209v1... [bam_rmdup_core] processing reference chrUn_DS485693v1... [bam_rmdup_core] processing reference chrUn_DS484076v1... [bam_rmdup_core] processing reference chrUn_DS485515v1... [bam_rmdup_core] processing reference chrUn_DS485199v1... [bam_rmdup_core] processing reference chrUn_DS485462v1... [bam_rmdup_core] processing reference chrUn_DS485501v1... [bam_rmdup_core] processing reference chrUn_DS484920v1... [bam_rmdup_core] processing reference chrUn_DS485163v1... [bam_rmdup_core] processing reference chrUn_DS485940v1... [bam_rmdup_core] processing reference chrUn_DS483849v1... [bam_rmdup_core] processing reference chrUn_DS483972v1... [bam_rmdup_core] processing reference chrUn_DS485683v1... [bam_rmdup_core] processing reference chrUn_DS483682v1... [bam_rmdup_core] processing reference chrUn_DS485477v1... [bam_rmdup_core] processing reference chrUn_DS485438v1... [bam_rmdup_core] processing reference chrUn_DS485082v1... [bam_rmdup_core] processing reference chrUn_DS483743v1... [bam_rmdup_core] processing reference chrUn_DS484369v1... [bam_rmdup_core] processing reference chrUn_DS484728v1... [bam_rmdup_core] processing reference chrUn_DS484443v1... [bam_rmdup_core] processing reference chrUn_DS485498v1... [bam_rmdup_core] processing reference chrUn_DS485668v1... [bam_rmdup_core] processing reference chrUn_DS485751v1... [bam_rmdup_core] processing reference chrUn_DS485545v1... [bam_rmdup_core] processing reference chrUn_DS484985v1... [bam_rmdup_core] processing reference chrUn_DS485353v1... [bam_rmdup_core] processing reference chrUn_DS485688v1... [bam_rmdup_core] processing reference chrUn_DS485686v1... [bam_rmdup_core] processing reference chrUn_DS484456v1... [bam_rmdup_core] processing reference chrUn_DS485488v1... [bam_rmdup_core] processing reference chrUn_DS483845v1... [bam_rmdup_core] processing reference chrUn_DS484251v1... [bam_rmdup_core] processing reference chrUn_DS484559v1... [bam_rmdup_core] processing reference chrUn_DS485062v1... [bam_rmdup_core] processing reference chrUn_DS484207v1... [bam_rmdup_core] processing reference chrUn_DS484309v1... [bam_rmdup_core] processing reference chrUn_DS483914v1... [bam_rmdup_core] processing reference chrUn_DS485362v1... [bam_rmdup_core] processing reference chrUn_DS484102v1... [bam_rmdup_core] processing reference chrUn_DS484380v1... [bam_rmdup_core] processing reference chrUn_DS485466v1... [bam_rmdup_core] processing reference chrUn_DS484243v1... [bam_rmdup_core] processing reference chrUn_DS485863v1... [bam_rmdup_core] processing reference chrUn_DS484152v1... [bam_rmdup_core] processing reference chrUn_DS483678v1... [bam_rmdup_core] processing reference chrUn_DS484654v1... [bam_rmdup_core] processing reference chrUn_DS484606v1... [bam_rmdup_core] processing reference chrUn_DS484355v1... [bam_rmdup_core] processing reference chrUn_DS485682v1... [bam_rmdup_core] processing reference chrUn_DS485059v1... [bam_rmdup_core] processing reference chrUn_DS486004v1... [bam_rmdup_core] processing reference chrUn_DS485173v1... [bam_rmdup_core] processing reference chrUn_DS483759v1... [bam_rmdup_core] processing reference chrUn_DS484111v1... [bam_rmdup_core] processing reference chrUn_DS483674v1... [bam_rmdup_core] processing reference chrUn_DS484895v1... [bam_rmdup_core] processing reference chrUn_DS484577v1... [bam_rmdup_core] processing reference chrUn_DS484991v1... [bam_rmdup_core] processing reference chrUn_DS483876v1... [bam_rmdup_core] processing reference chrUn_DS485867v1... [bam_rmdup_core] processing reference chrUn_DS485509v1... [bam_rmdup_core] processing reference chrUn_DS484331v1... [bam_rmdup_core] processing reference chrUn_DS485368v1... [bam_rmdup_core] processing reference chrUn_DS484276v1... [bam_rmdup_core] processing reference chrUn_DS485005v1... [bam_rmdup_core] processing reference chrUn_DS485469v1... [bam_rmdup_core] processing reference chrUn_DS483855v1... [bam_rmdup_core] processing reference chrUn_DS483662v1... [bam_rmdup_core] processing reference chrUn_DS483681v1... [bam_rmdup_core] processing reference chrUn_DS484916v1... [bam_rmdup_core] processing reference chrUn_DS483726v1... [bam_rmdup_core] processing reference chrUn_DS484396v1... [bam_rmdup_core] processing reference chrUn_DS484310v1... [bam_rmdup_core] processing reference chrUn_DS485117v1... [bam_rmdup_core] processing reference chrUn_DS485468v1... [bam_rmdup_core] processing reference chrUn_DS484263v1... [bam_rmdup_core] processing reference chrUn_DS484501v1... [bam_rmdup_core] processing reference chrUn_DS485991v1... [bam_rmdup_core] processing reference chrUn_DS485361v1... [bam_rmdup_core] processing reference chrUn_DS484982v1... [bam_rmdup_core] processing reference chrUn_DS483783v1... [bam_rmdup_core] processing reference chrUn_DS485411v1... [bam_rmdup_core] processing reference chrUn_DS485622v1... [bam_rmdup_core] processing reference chrUn_DS485671v1... [bam_rmdup_core] processing reference chrUn_DS485820v1... [bam_rmdup_core] processing reference chrUn_DS484048v1... [bam_rmdup_core] processing reference chrUn_DS485420v1... [bam_rmdup_core] processing reference chrUn_DS484059v1... [bam_rmdup_core] processing reference chrUn_DS483693v1... [bam_rmdup_core] processing reference chrUn_DS484228v1... [bam_rmdup_core] processing reference chrUn_DS484239v1... [bam_rmdup_core] processing reference chrUn_DS484595v1... [bam_rmdup_core] processing reference chrUn_DS484274v1... [bam_rmdup_core] processing reference chrUn_DS485917v1... [bam_rmdup_core] processing reference chrUn_DS485531v1... [bam_rmdup_core] processing reference chrUn_DS484238v1... [bam_rmdup_core] processing reference chrUn_DS485965v1... [bam_rmdup_core] processing reference chrUn_DS485453v1... [bam_rmdup_core] processing reference chrUn_DS484542v1... [bam_rmdup_core] processing reference chrUn_DS483970v1... [bam_rmdup_core] processing reference chrUn_DS484632v1... [bam_rmdup_core] processing reference chrUn_DS485401v1... [bam_rmdup_core] processing reference chrUn_DS484487v1... [bam_rmdup_core] processing reference chrUn_DS484087v1... [bam_rmdup_core] processing reference chrUn_DS485742v1... [bam_rmdup_core] processing reference chrUn_DS483919v1... [bam_rmdup_core] processing reference chrUn_DS484748v1... [bam_rmdup_core] processing reference chrUn_DS484312v1... [bam_rmdup_core] processing reference chrUn_DS483797v1... [bam_rmdup_core] processing reference chrUn_DS484315v1... [bam_rmdup_core] processing reference chrUn_DS484027v1... [bam_rmdup_core] processing reference chrUn_DS485847v1... [bam_rmdup_core] processing reference chrUn_DS483734v1... [bam_rmdup_core] processing reference chrUn_DS484510v1... [bam_rmdup_core] processing reference chrUn_DS484118v1... [bam_rmdup_core] processing reference chrUn_DS485915v1... [bam_rmdup_core] processing reference chrUn_DS484155v1... [bam_rmdup_core] processing reference chrUn_DS485007v1... [bam_rmdup_core] processing reference chrUn_DS485544v1... [bam_rmdup_core] processing reference chrUn_DS484651v1... [bam_rmdup_core] processing reference chrUn_DS485968v1... [bam_rmdup_core] processing reference chrUn_DS484962v1... [bam_rmdup_core] processing reference chrUn_DS484984v1... [bam_rmdup_core] processing reference chrUn_DS485428v1... [bam_rmdup_core] processing reference chrUn_DS484967v1... [bam_rmdup_core] processing reference chrUn_DS484910v1... [bam_rmdup_core] processing reference chrUn_DS484550v1... [bam_rmdup_core] processing reference chrUn_DS483944v1... [bam_rmdup_core] processing reference chrUn_DS483908v1... [bam_rmdup_core] processing reference chrUn_DS485291v1... [bam_rmdup_core] processing reference chrUn_DS483792v1... [bam_rmdup_core] processing reference chrUn_DS483848v1... [bam_rmdup_core] processing reference chrUn_DS484886v1... [bam_rmdup_core] processing reference chrUn_DS485264v1... [bam_rmdup_core] processing reference chrUn_DS485497v1... [bam_rmdup_core] processing reference chrUn_DS485025v1... [bam_rmdup_core] processing reference chrUn_DS485118v1... [bam_rmdup_core] processing reference chrUn_DS485569v1... [bam_rmdup_core] processing reference chrUn_DS484149v1... [bam_rmdup_core] processing reference chrUn_DS484929v1... [bam_rmdup_core] processing reference chrUn_DS485441v1... [bam_rmdup_core] processing reference chrUn_DS483701v1... [bam_rmdup_core] processing reference chrUn_DS483979v1... [bam_rmdup_core] processing reference chrUn_DS484291v1... [bam_rmdup_core] processing reference chrUn_DS485053v1... [bam_rmdup_core] processing reference chrUn_DS484093v1... [bam_rmdup_core] processing reference chrUn_DS484658v1... [bam_rmdup_core] processing reference chrUn_DS484847v1... [bam_rmdup_core] processing reference chrUn_DS484435v1... [bam_rmdup_core] processing reference chrUn_DS484565v1... [bam_rmdup_core] processing reference chrUn_DS485379v1... [bam_rmdup_core] processing reference chrUn_DS484403v1... [bam_rmdup_core] processing reference chrUn_DS483930v1... [bam_rmdup_core] processing reference chrUn_DS484635v1... [bam_rmdup_core] processing reference chrUn_DS485392v1... [bam_rmdup_core] processing reference chrUn_DS484678v1... [bam_rmdup_core] processing reference chrUn_DS483675v1... [bam_rmdup_core] processing reference chrUn_DS485263v1... [bam_rmdup_core] processing reference chrUn_DS485571v1... [bam_rmdup_core] processing reference chrUn_DS484954v1... [bam_rmdup_core] processing reference chrUn_DS484467v1... [bam_rmdup_core] processing reference chrUn_DS484148v1... [bam_rmdup_core] processing reference chrUn_DS484852v1... [bam_rmdup_core] processing reference chrUn_DS485636v1... [bam_rmdup_core] processing reference chrUn_DS483769v1... [bam_rmdup_core] processing reference chrUn_DS484779v1... [bam_rmdup_core] processing reference chrUn_DS485228v1... [bam_rmdup_core] processing reference chrUn_DS484169v1... [bam_rmdup_core] processing reference chrUn_DS485657v1... [bam_rmdup_core] processing reference chrUn_DS484520v1... [bam_rmdup_core] processing reference chrUn_DS485780v1... [bam_rmdup_core] processing reference chrUn_DS485656v1... [bam_rmdup_core] processing reference chrUn_DS483659v1... [bam_rmdup_core] processing reference chrUn_DS483686v1... [bam_rmdup_core] processing reference chrUn_DS485876v1... [bam_rmdup_core] processing reference chrUn_DS485948v1... [bam_rmdup_core] processing reference chrUn_DS483965v1... [bam_rmdup_core] processing reference chrUn_DS485292v1... [bam_rmdup_core] processing reference chrUn_DS484156v1... [bam_rmdup_core] processing reference chrUn_DS485947v1... [bam_rmdup_core] processing reference chrUn_DS484544v1... [bam_rmdup_core] processing reference chrUn_DS485275v1... [bam_rmdup_core] processing reference chrUn_DS483801v1... [bam_rmdup_core] processing reference chrUn_DS484463v1... [bam_rmdup_core] processing reference chrUn_DS485174v1... [bam_rmdup_core] processing reference chrUn_DS485194v1... [bam_rmdup_core] processing reference chrUn_DS484283v1... [bam_rmdup_core] processing reference chrUn_DS484183v1... [bam_rmdup_core] processing reference chrUn_DS484499v1... [bam_rmdup_core] processing reference chrUn_DS484553v1... [bam_rmdup_core] processing reference chrUn_DS483872v1... [bam_rmdup_core] processing reference chrUn_DS485161v1... [bam_rmdup_core] processing reference chrUn_DS485482v1... [bam_rmdup_core] processing reference chrUn_DS484799v1... [bam_rmdup_core] processing reference chrUn_DS484998v1... [bam_rmdup_core] processing reference chrUn_DS483841v1... [bam_rmdup_core] processing reference chrUn_DS485031v1... [bam_rmdup_core] processing reference chrUn_DS484254v1... [bam_rmdup_core] processing reference chrUn_DS484503v1... [bam_rmdup_core] processing reference chrUn_DS485397v1... [bam_rmdup_core] processing reference chrUn_DS485004v1... [bam_rmdup_core] processing reference chrUn_DS485200v1... [bam_rmdup_core] processing reference chrUn_DS483750v1... [bam_rmdup_core] processing reference chrUn_DS485833v1... [bam_rmdup_core] processing reference chrUn_DS485944v1... [bam_rmdup_core] processing reference chrUn_DS485714v1... [bam_rmdup_core] processing reference chrUn_DS484828v1... [bam_rmdup_core] processing reference chrUn_DS483670v1... [bam_rmdup_core] processing reference chrUn_DS484427v1... [bam_rmdup_core] processing reference chrUn_DS484083v1... [bam_rmdup_core] processing reference chrUn_DS485020v1... [bam_rmdup_core] processing reference chrUn_DS484287v1... [bam_rmdup_core] processing reference chrUn_DS484062v1... [bam_rmdup_core] processing reference chrUn_DS484348v1... [bam_rmdup_core] processing reference chrUn_DS485253v1... [bam_rmdup_core] processing reference chrUn_DS484812v1... [bam_rmdup_core] processing reference chrUn_DS484314v1... [bam_rmdup_core] processing reference chrUn_DS485306v1... [bam_rmdup_core] processing reference chrUn_DS483975v1... [bam_rmdup_core] processing reference chrUn_DS485204v1... [bam_rmdup_core] processing reference chrUn_DS485667v1... [bam_rmdup_core] processing reference chrUn_DS484080v1... [bam_rmdup_core] processing reference chrUn_DS483939v1... [bam_rmdup_core] processing reference chrUn_DS485535v1... [bam_rmdup_core] processing reference chrUn_DS484258v1... [bam_rmdup_core] processing reference chrUn_DS484285v1... [bam_rmdup_core] processing reference chrUn_DS483867v1... [bam_rmdup_core] processing reference chrUn_DS485066v1... [bam_rmdup_core] processing reference chrUn_DS484271v1... [bam_rmdup_core] processing reference chrUn_DS484117v1... [bam_rmdup_core] processing reference chrUn_DS484042v1... [bam_rmdup_core] processing reference chrUn_DS483746v1... [bam_rmdup_core] processing reference chrUn_DS485177v1... [bam_rmdup_core] processing reference chrUn_DS483767v1... [bam_rmdup_core] processing reference chrUn_DS483862v1... [bam_rmdup_core] processing reference chrUn_DS484878v1... [bam_rmdup_core] processing reference chrUn_DS483737v1... [bam_rmdup_core] processing reference chrUn_DS483689v1... [bam_rmdup_core] processing reference chrUn_DS484255v1... [bam_rmdup_core] processing reference chrUn_DS484528v1... [bam_rmdup_core] processing reference chrUn_DS484286v1... [bam_rmdup_core] processing reference chrUn_DS483816v1... [bam_rmdup_core] processing reference chrUn_DS484458v1... [bam_rmdup_core] processing reference chrUn_DS483961v1... [bam_rmdup_core] processing reference chrUn_DS485918v1... [bam_rmdup_core] processing reference chrUn_DS485692v1... [bam_rmdup_core] processing reference chrUn_DS484300v1... [bam_rmdup_core] processing reference chrUn_DS484138v1... [bam_rmdup_core] processing reference chrUn_DS484189v1... [bam_rmdup_core] processing reference chrUn_DS484267v1... [bam_rmdup_core] processing reference chrUn_DS483870v1... [bam_rmdup_core] processing reference chrUn_DS484022v1... [bam_rmdup_core] processing reference chrUn_DS484105v1... [bam_rmdup_core] processing reference chrUn_DS483824v1... [bam_rmdup_core] processing reference chrUn_DS483945v1... [bam_rmdup_core] processing reference chrUn_DS484534v1... [bam_rmdup_core] processing reference chrUn_DS484901v1... [bam_rmdup_core] processing reference chrUn_DS484789v1... [bam_rmdup_core] processing reference chrUn_DS483904v1... [bam_rmdup_core] processing reference chrUn_DS485085v1... [bam_rmdup_core] processing reference chrUn_DS483773v1... [bam_rmdup_core] processing reference chrUn_DS485648v1... [bam_rmdup_core] processing reference chrUn_DS484343v1... [bam_rmdup_core] processing reference chrUn_DS483702v1... [bam_rmdup_core] processing reference chrUn_DS483868v1... [bam_rmdup_core] processing reference chrUn_DS484434v1... [bam_rmdup_core] processing reference chrUn_DS485176v1... [bam_rmdup_core] processing reference chrUn_DS485152v1... [bam_rmdup_core] processing reference chrUn_DS484078v1... [bam_rmdup_core] processing reference chrUn_DS483814v1... [bam_rmdup_core] processing reference chrUn_DS484206v1... [bam_rmdup_core] processing reference chrUn_DS485071v1... [bam_rmdup_core] processing reference chrUn_DS485584v1... [bam_rmdup_core] processing reference chrUn_DS483886v1... [bam_rmdup_core] processing reference chrUn_DS484004v1... [bam_rmdup_core] processing reference chrUn_DS484015v1... [bam_rmdup_core] processing reference chrUn_DS485579v1... [bam_rmdup_core] processing reference chrUn_DS483956v1... [bam_rmdup_core] processing reference chrUn_DS484412v1... [bam_rmdup_core] processing reference chrUn_DS484213v1... [bam_rmdup_core] processing reference chrUn_DS484221v1... [bam_rmdup_core] processing reference chrUn_DS485746v1... [bam_rmdup_core] processing reference chrUn_DS484306v1... [bam_rmdup_core] processing reference chrUn_DS484486v1... [bam_rmdup_core] processing reference chrUn_DS484395v1... [bam_rmdup_core] processing reference chrUn_DS485216v1... [bam_rmdup_core] processing reference chrUn_DS483964v1... [bam_rmdup_core] processing reference chrUn_DS484159v1... [bam_rmdup_core] processing reference chrUn_DS485419v1... [bam_rmdup_core] processing reference chrUn_DS485002v1... [bam_rmdup_core] processing reference chrUn_DS483866v1... [bam_rmdup_core] processing reference chrUn_DS484107v1... [bam_rmdup_core] processing reference chrUn_DS484321v1... [bam_rmdup_core] processing reference chrUn_DS484242v1... [bam_rmdup_core] processing reference chrUn_DS484762v1... [bam_rmdup_core] processing reference chrUn_DS485297v1... [bam_rmdup_core] processing reference chrUn_DS484116v1... [bam_rmdup_core] processing reference chrUn_DS485169v1... [bam_rmdup_core] processing reference chrUn_DS483822v1... [bam_rmdup_core] processing reference chrUn_DS483768v1... [bam_rmdup_core] processing reference chrUn_DS483735v1... [bam_rmdup_core] processing reference chrUn_DS484097v1... [bam_rmdup_core] processing reference chrUn_DS484001v1... [bam_rmdup_core] processing reference chrUn_DS483649v1... [bam_rmdup_core] processing reference chrUn_DS484079v1... [bam_rmdup_core] processing reference chrUn_DS484521v1... [bam_rmdup_core] processing reference chrUn_DS483863v1... [bam_rmdup_core] processing reference chrUn_DS484196v1... [bam_rmdup_core] processing reference chrUn_DS485955v1... [bam_rmdup_core] processing reference chrUn_DS484573v1... [bam_rmdup_core] processing reference chrUn_DS483994v1... [bam_rmdup_core] processing reference chrUn_DS484013v1... [bam_rmdup_core] processing reference chrUn_DS484649v1... [bam_rmdup_core] processing reference chrUn_DS485107v1... [bam_rmdup_core] processing reference chrUn_DS483646v1... [bam_rmdup_core] processing reference chrUn_DS484592v1... [bam_rmdup_core] processing reference chrUn_DS484123v1... [bam_rmdup_core] processing reference chrUn_DS484007v1... [bam_rmdup_core] processing reference chrUn_DS484230v1... [bam_rmdup_core] processing reference chrUn_DS483819v1... [bam_rmdup_core] processing reference chrUn_DS483898v1... [bam_rmdup_core] processing reference chrUn_DS483762v1... [bam_rmdup_core] processing reference chrUn_DS483895v1... [bam_rmdup_core] processing reference chrUn_DS483929v1... [bam_rmdup_core] processing reference chrUn_DS483812v1... [bam_rmdup_core] processing reference chrUn_DS483785v1... [bam_rmdup_core] processing reference chrUn_DS483943v1... [bam_rmdup_core] processing reference chrUn_DS483753v1... [bam_rmdup_core] processing reference chrUn_DS484144v1... [bam_rmdup_core] processing reference chrUn_DS483865v1... [bam_rmdup_core] processing reference chrUn_DS484090v1... [bam_rmdup_core] processing reference chrUn_DS483757v1... [bam_rmdup_core] processing reference chrUn_DS484010v1... [bam_rmdup_core] processing reference chrUn_DS483751v1... [bam_rmdup_core] processing reference chrUn_DS484167v1... [bam_rmdup_core] processing reference chrUn_DS483918v1... [bam_rmdup_core] processing reference chrUn_DS484414v1... [bam_rmdup_core] processing reference chrUn_DS484134v1... [bam_rmdup_core] processing reference chrUn_DS483833v1... [bam_rmdup_core] processing reference chrUn_DS483878v1... [bam_rmdup_core] processing reference chrUn_DS483793v1... [bam_rmdup_core] processing reference chrUn_DS483770v1... [bam_rmdup_core] processing reference chrUn_DS483947v1... [bam_rmdup_core] processing reference chrUn_DS483954v1... [bam_rmdup_core] processing reference chrUn_DS484222v1... [bam_rmdup_core] processing reference chrUn_DS483776v1... [bam_rmdup_core] processing reference chrUn_DS484209v1... [bam_rmdup_core] processing reference chrUn_DS483927v1... [bam_rmdup_core] processing reference chrUn_DS483992v1... [bam_rmdup_core] processing reference chrUn_DS484036v1... [bam_rmdup_core] processing reference chrUn_DS483986v1... [bam_rmdup_core] processing reference chrUn_DS483949v1... [bam_rmdup_core] processing reference chrUn_DS484000v1... [bam_rmdup_core] processing reference chrUn_DS483941v1... [bam_rmdup_core] processing reference chrUn_DS484018v1... [bam_rmdup_core] processing reference chrUn_DS483999v1... [bam_rmdup_core] processing reference chrUn_DS484391v1... [bam_rmdup_core] processing reference chrUn_DS484539v1... [bam_rmdup_core] processing reference chrUn_DS483828v1... [bam_rmdup_core] processing reference chrUn_DS483811v1... [bam_rmdup_core] processing reference chrUn_DS483832v1... [bam_rmdup_core] processing reference chrUn_DS484386v1... [bam_rmdup_core] processing reference chrUn_DS483896v1... [bam_rmdup_core] processing reference chrUn_DS484426v1... [bam_rmdup_core] processing reference chrUn_DS483800v1... [bam_rmdup_core] processing reference chrUn_DS483763v1... [bam_rmdup_core] processing reference chrUn_DS483839v1... [bam_rmdup_core] processing reference chrUn_DS483880v1... [bam_rmdup_core] processing reference chrUn_DS483781v1... [bam_rmdup_core] processing reference chrUn_DS483641v1... [bam_rmdup_core] processing reference chrUn_DS484224v1... [bam_rmdup_core] processing reference chrUn_DS483760v1... [bam_rmdup_core] processing reference chrUn_DS483910v1... [bam_rmdup_core] processing reference chrUn_DS484848v1... [bam_rmdup_core] processing reference chrUn_DS483754v1... [bam_rmdup_core] processing reference chrUn_DS483758v1... [bam_rmdup_core] processing reference chrUn_DS483846v1... [bam_rmdup_core] processing reference chrUn_DS484317v1... [bam_rmdup_core] processing reference chrUn_DS483744v1... [bam_rmdup_core] processing reference chrUn_DS483874v1... [bam_rmdup_core] processing reference chrUn_CP007072v1... [bam_rmdup_core] processing reference chrUn_CP007073v1... [bam_rmdup_core] processing reference chrUn_CP007074v1... [bam_rmdup_core] processing reference chrUn_CP007075v1... [bam_rmdup_core] processing reference chrUn_CP007076v1... [bam_rmdup_core] processing reference chrUn_CP007078v1... [bam_rmdup_core] processing reference chrUn_CP007079v1... [bam_rmdup_core] processing reference chrUn_CP007082v1... [bam_rmdup_core] processing reference chrUn_CP007083v1... [bam_rmdup_core] processing reference chrUn_CP007084v1... [bam_rmdup_core] processing reference chrUn_CP007085v1... [bam_rmdup_core] processing reference chrUn_CP007086v1... [bam_rmdup_core] processing reference chrUn_CP007087v1... [bam_rmdup_core] processing reference chrUn_CP007088v1... [bam_rmdup_core] processing reference chrUn_CP007089v1... [bam_rmdup_core] processing reference chrUn_CP007090v1... [bam_rmdup_core] processing reference chrUn_CP007091v1... [bam_rmdup_core] processing reference chrUn_CP007092v1... [bam_rmdup_core] processing reference chrUn_CP007093v1... [bam_rmdup_core] processing reference chrUn_CP007094v1... [bam_rmdup_core] processing reference chrUn_CP007095v1... [bam_rmdup_core] processing reference chrUn_CP007096v1... [bam_rmdup_core] processing reference chrUn_CP007080v1... [bam_rmdup_core] processing reference chrUn_CP007097v1... [bam_rmdup_core] processing reference chrUn_CP007098v1... [bam_rmdup_core] processing reference chrUn_CP007099v1... [bam_rmdup_core] processing reference chrUn_CP007100v1... [bam_rmdup_core] processing reference chrUn_CP007101v1... [bam_rmdup_core] processing reference chrUn_CP007081v1... [bam_rmdup_core] processing reference chrUn_CP007105v1... [bam_rmdup_core] processing reference chrUn_DS483562v1... [bam_rmdup_core] processing reference chrUn_CP007120v1... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrX_DS484701v1_random... [bam_rmdup_core] processing reference chrX_DS484968v1_random... [bam_rmdup_core] processing reference chrX_DS484668v1_random... [bam_rmdup_core] processing reference chrX_DS484664v1_random... [bam_rmdup_core] processing reference chrX_DS484272v1_random... [bam_rmdup_core] processing reference chrX_DS485077v1_random... [bam_rmdup_core] processing reference chrX_DS484084v1_random... [bam_rmdup_core] processing reference chrX_DS484161v1_random... [bam_rmdup_core] processing reference chrX_DS484284v1_random... [bam_rmdup_core] processing reference chrX_DS484459v1_random... [bam_rmdup_core] processing reference chrX_DS484765v1_random... [bam_rmdup_core] processing reference chrX_DS484622v1_random... [bam_rmdup_core] processing reference chrX_DS484526v1_random... [bam_rmdup_core] processing reference chrX_DS485994v1_random... [bam_rmdup_core] processing reference chrX_DS485235v1_random... [bam_rmdup_core] processing reference chrX_DS484745v1_random... [bam_rmdup_core] processing reference chrX_DS484507v1_random... [bam_rmdup_core] processing reference chrX_DS484074v1_random... [bam_rmdup_core] processing reference chrX_DS485618v1_random... [bam_rmdup_core] processing reference chrX_DS485797v1_random... [bam_rmdup_core] processing reference chrX_DS484367v1_random... [bam_rmdup_core] processing reference chrX_DS484809v1_random... [bam_rmdup_core] processing reference chrX_DS484965v1_random... [bam_rmdup_core] processing reference chrX_DS484585v1_random... [bam_rmdup_core] processing reference chrX_DS484219v1_random... [bam_rmdup_core] processing reference chrX_DS484650v1_random... [bam_rmdup_core] processing reference chrX_DS484730v1_random... [bam_rmdup_core] processing reference chrX_DS484200v1_random... [bam_rmdup_core] processing reference chrX_DS484512v1_random... [bam_rmdup_core] processing reference chrX_DS484582v1_random... [bam_rmdup_core] processing reference chrX_DS484529v1_random... [bam_rmdup_core] processing reference chrX_DS484429v1_random... [bam_rmdup_core] processing reference chrX_DS484518v1_random... [bam_rmdup_core] processing reference chrX_DS484833v1_random... [bam_rmdup_core] processing reference chrX_DS484724v1_random... [bam_rmdup_core] processing reference chrX_DS485015v1_random... [bam_rmdup_core] processing reference chrX_DS484594v1_random... [bam_rmdup_core] processing reference chrX_DS485606v1_random... [bam_rmdup_core] processing reference chrX_DS484819v1_random... [bam_rmdup_core] processing reference chrX_DS484358v1_random... [bam_rmdup_core] processing reference chrX_DS484845v1_random... [bam_rmdup_core] processing reference chrX_DS484430v1_random... [bam_rmdup_core] processing reference chrX_DS484568v1_random... [bam_rmdup_core] processing reference chrX_DS484583v1_random... [bam_rmdup_core] processing reference chrX_DS484428v1_random... [bam_rmdup_core] processing reference chrX_DS485266v1_random... [bam_rmdup_core] processing reference chrX_DS484399v1_random... [bam_rmdup_core] processing reference chrX_DS485514v1_random... [bam_rmdup_core] processing reference chrX_DS484012v1_random... [bam_rmdup_core] processing reference chrX_DS484552v1_random... [bam_rmdup_core] processing reference chrX_DS485074v1_random... [bam_rmdup_core] processing reference chrX_DS484576v1_random... [bam_rmdup_core] processing reference chrX_DS484803v1_random... [bam_rmdup_core] processing reference chrX_DS485765v1_random... [bam_rmdup_core] processing reference chrX_DS484447v1_random... [bam_rmdup_core] processing reference chrX_DS485962v1_random... [bam_rmdup_core] processing reference chrX_DS485769v1_random... [bam_rmdup_core] processing reference chrX_DS484533v1_random... [bam_rmdup_core] processing reference chrX_DS484388v1_random... [bam_rmdup_core] processing reference chrX_DS484564v1_random... [bam_rmdup_core] processing reference chrX_DS484126v1_random... [bam_rmdup_core] processing reference chrX_DS484450v1_random... [bam_rmdup_core] processing reference chrX_DS484610v1_random... [bam_rmdup_core] processing reference chrX_DS485238v1_random... [bam_rmdup_core] processing reference chrX_DS484402v1_random... [bam_rmdup_core] processing reference chrX_DS484558v1_random... [bam_rmdup_core] processing reference chrX_DS484684v1_random... [bam_rmdup_core] processing reference chrX_DS484951v1_random... [bam_rmdup_core] processing reference chrX_DS484679v1_random... [bam_rmdup_core] processing reference chrX_DS484691v1_random... [bam_rmdup_core] processing reference chrX_DS484647v1_random... [bam_rmdup_core] processing reference chrX_DS485913v1_random... [bam_rmdup_core] processing reference chrX_DS484608v1_random... [bam_rmdup_core] processing reference chrX_DS484913v1_random... [bam_rmdup_core] processing reference chrX_DS485096v1_random... [bam_rmdup_core] processing reference chrX_DS485257v1_random... [bam_rmdup_core] processing reference chrX_DS484547v1_random... [bam_rmdup_core] processing reference chrX_DS484596v1_random... [bam_rmdup_core] processing reference chrX_DS484497v1_random... [bam_rmdup_core] processing reference chrX_DS485967v1_random... [bam_rmdup_core] processing reference chrX_DS484688v1_random... [bam_rmdup_core] processing reference chrX_DS485476v1_random... [bam_rmdup_core] processing reference chrX_DS485649v1_random... [bam_rmdup_core] processing reference chrX_DS484996v1_random... [bam_rmdup_core] processing reference chrX_DS485981v1_random... [bam_rmdup_core] processing reference chrX_DS484235v1_random... [bam_rmdup_core] processing reference chrX_DS484431v1_random... [bam_rmdup_core] processing reference chrX_DS484672v1_random... [bam_rmdup_core] processing reference chrX_DS484961v1_random... [bam_rmdup_core] processing reference chrX_DS483648v1_random... [bam_rmdup_core] processing reference chrX_DS484600v1_random... [bam_rmdup_core] processing reference chrX_DS485813v1_random... [bam_rmdup_core] processing reference chrX_DS485104v1_random... [bam_rmdup_core] processing reference chrX_DS484785v1_random... [bam_rmdup_core] processing reference chrX_DS484379v1_random... [bam_rmdup_core] processing reference chrX_DS485465v1_random... [bam_rmdup_core] processing reference chrX_DS485676v1_random... [bam_rmdup_core] processing reference chrX_DS485735v1_random... [bam_rmdup_core] processing reference chrX_DS484023v1_random... [bam_rmdup_core] processing reference chrX_DS484401v1_random... [bam_rmdup_core] processing reference chrX_DS484354v1_random... [bam_rmdup_core] processing reference chrX_DS484298v1_random... [bam_rmdup_core] processing reference chrX_DS484723v1_random... [bam_rmdup_core] processing reference chrX_DS485860v1_random... [bam_rmdup_core] processing reference chrX_DS484995v1_random... [bam_rmdup_core] processing reference chrX_DS484393v1_random... [bam_rmdup_core] processing reference chrX_DS484911v1_random... [bam_rmdup_core] processing reference chrX_DS485305v1_random... [bam_rmdup_core] processing reference chrX_DS484362v1_random... [bam_rmdup_core] processing reference chrX_DS484628v1_random... [bam_rmdup_core] processing reference chrX_DS484604v1_random... [bam_rmdup_core] processing reference chrX_DS484201v1_random... [bam_rmdup_core] processing reference chrX_DS484411v1_random... [bam_rmdup_core] processing reference chrX_DS485855v1_random... [bam_rmdup_core] processing reference chrX_DS484811v1_random... [bam_rmdup_core] processing reference chrX_DS484504v1_random... [bam_rmdup_core] processing reference chrX_DS484695v1_random... [bam_rmdup_core] processing reference chrX_DS484670v1_random... [bam_rmdup_core] processing reference chrX_DS484261v1_random... [bam_rmdup_core] processing reference chrX_DS485660v1_random... [bam_rmdup_core] processing reference chrX_DS485164v1_random... [bam_rmdup_core] processing reference chrX_DS484609v1_random... [bam_rmdup_core] processing reference chrX_DS485941v1_random... [bam_rmdup_core] processing reference chrX_DS484545v1_random... [bam_rmdup_core] processing reference chrX_DS484397v1_random... [bam_rmdup_core] processing reference chrX_DS484368v1_random... [bam_rmdup_core] processing reference chrX_DS484198v1_random... [bam_rmdup_core] processing reference chrX_DS485101v1_random... [bam_rmdup_core] processing reference chrX_DS485141v1_random... [bam_rmdup_core] processing reference chrX_DS484625v1_random... [bam_rmdup_core] processing reference chrX_DS484626v1_random... [bam_rmdup_core] processing reference chrX_DS485723v1_random... [bam_rmdup_core] processing reference chrX_DS484587v1_random... [bam_rmdup_core] processing reference chrX_DS485167v1_random... [bam_rmdup_core] processing reference chrX_DS485934v1_random... [bam_rmdup_core] processing reference chrX_DS484364v1_random... [bam_rmdup_core] processing reference chrX_DS485110v1_random... [bam_rmdup_core] processing reference chrX_DS484540v1_random... [bam_rmdup_core] processing reference chrX_DS484879v1_random... [bam_rmdup_core] processing reference chrX_DS484182v1_random... [bam_rmdup_core] processing reference chrX_DS484850v1_random... [bam_rmdup_core] processing reference chrX_DS485785v1_random... [bam_rmdup_core] processing reference chrX_DS484215v1_random... [bam_rmdup_core] processing reference chrX_DS484337v1_random... [bam_rmdup_core] processing reference chrX_DS485126v1_random... [bam_rmdup_core] processing reference chrX_DS485909v1_random... [bam_rmdup_core] processing reference chrX_DS484703v1_random... [bam_rmdup_core] processing reference chrX_DS484740v1_random... [bam_rmdup_core] processing reference chrX_DS484660v1_random... [bam_rmdup_core] processing reference chrX_DS484810v1_random... [bam_rmdup_core] processing reference chrX_DS485081v1_random... [bam_rmdup_core] processing reference chrX_DS484758v1_random... [bam_rmdup_core] processing reference chrX_DS484763v1_random... [bam_rmdup_core] processing reference chrX_DS484572v1_random... [bam_rmdup_core] processing reference chrX_DS484477v1_random... [bam_rmdup_core] processing reference chrX_DS485691v1_random... [bam_rmdup_core] processing reference chrX_DS485801v1_random... [bam_rmdup_core] processing reference chrX_DS485845v1_random... [bam_rmdup_core] processing reference chrX_DS484101v1_random... [bam_rmdup_core] processing reference chrX_DS485573v1_random... [bam_rmdup_core] processing reference chrX_DS484690v1_random... [bam_rmdup_core] processing reference chrX_DS484598v1_random... [bam_rmdup_core] processing reference chrX_DS484406v1_random... [bam_rmdup_core] processing reference chrX_DS484349v1_random... [bam_rmdup_core] processing reference chrX_DS485987v1_random... [bam_rmdup_core] processing reference chrX_DS484555v1_random... [bam_rmdup_core] processing reference chrX_DS485687v1_random... [bam_rmdup_core] processing reference chrX_DS485109v1_random... [bam_rmdup_core] processing reference chrX_DS484569v1_random... [bam_rmdup_core] processing reference chrX_DS484648v1_random... [bam_rmdup_core] processing reference chrX_DS484483v1_random... [bam_rmdup_core] processing reference chrX_DS485856v1_random... [bam_rmdup_core] processing reference chrX_DS484633v1_random... [bam_rmdup_core] processing reference chrX_DS484500v1_random... [bam_rmdup_core] processing reference chrX_DS484136v1_random... [bam_rmdup_core] processing reference chrX_DS484871v1_random... [bam_rmdup_core] processing reference chrX_DS484360v1_random... [bam_rmdup_core] processing reference chrX_DS485852v1_random... [bam_rmdup_core] processing reference chrX_DS484570v1_random... [bam_rmdup_core] processing reference chrX_DS484783v1_random... [bam_rmdup_core] processing reference chrX_DS484288v1_random... [bam_rmdup_core] processing reference chrX_DS484778v1_random... [bam_rmdup_core] processing reference chrX_DS484955v1_random... [bam_rmdup_core] processing reference chrX_DS484252v1_random... [bam_rmdup_core] processing reference chrX_DS484935v1_random... [bam_rmdup_core] processing reference chrX_DS485620v1_random... [bam_rmdup_core] processing reference chrX_DS485898v1_random... [bam_rmdup_core] processing reference chrX_DS485782v1_random... [bam_rmdup_core] processing reference chrX_DS484880v1_random... [bam_rmdup_core] processing reference chrX_DS484840v1_random... [bam_rmdup_core] processing reference chrX_DS484837v1_random... [bam_rmdup_core] processing reference chrX_DS484698v1_random... [bam_rmdup_core] processing reference chrX_DS484442v1_random... [bam_rmdup_core] processing reference chrX_DS485771v1_random... [bam_rmdup_core] processing reference chrX_DS484644v1_random... [bam_rmdup_core] processing reference chrX_DS485084v1_random... [bam_rmdup_core] processing reference chrX_DS484323v1_random... [bam_rmdup_core] processing reference chrX_DS484457v1_random... [bam_rmdup_core] processing reference chrX_DS484112v1_random... [bam_rmdup_core] processing reference chrX_DS484741v1_random... [bam_rmdup_core] processing reference chrX_DS484786v1_random... [bam_rmdup_core] processing reference chrX_DS485745v1_random... [bam_rmdup_core] processing reference chrX_DS484409v1_random... [bam_rmdup_core] processing reference chrX_DS484590v1_random... [bam_rmdup_core] processing reference chrX_DS484890v1_random... [bam_rmdup_core] processing reference chrX_DS485043v1_random... [bam_rmdup_core] processing reference chrX_DS484731v1_random... [bam_rmdup_core] processing reference chrX_DS484768v1_random... [bam_rmdup_core] processing reference chrX_DS484611v1_random... [bam_rmdup_core] processing reference chrX_DS484519v1_random... [bam_rmdup_core] processing reference chrX_DS485599v1_random... [bam_rmdup_core] processing reference chrX_DS485111v1_random... [bam_rmdup_core] processing reference chrX_DS483963v1_random... [bam_rmdup_core] processing reference chrX_DS484605v1_random... [bam_rmdup_core] processing reference chrX_DS485471v1_random... [bam_rmdup_core] processing reference chrX_DS484657v1_random... [bam_rmdup_core] processing reference chrX_DS484305v1_random... [bam_rmdup_core] processing reference chrX_DS485635v1_random... [bam_rmdup_core] processing reference chrX_DS485277v1_random... [bam_rmdup_core] processing reference chrX_DS484597v1_random... [bam_rmdup_core] processing reference chrX_DS484178v1_random... [bam_rmdup_core] processing reference chrX_DS485262v1_random... [bam_rmdup_core] processing reference chrX_DS485478v1_random... [bam_rmdup_core] processing reference chrX_DS484683v1_random... [bam_rmdup_core] processing reference chrX_DS485334v1_random... [bam_rmdup_core] processing reference chrX_DS485112v1_random... [bam_rmdup_core] processing reference chrX_DS484506v1_random... [bam_rmdup_core] processing reference chrX_DS485336v1_random... [bam_rmdup_core] processing reference chrX_DS483669v1_random... [bam_rmdup_core] processing reference chrX_DS483655v1_random... [bam_rmdup_core] processing reference chrX_DS485959v1_random... [bam_rmdup_core] processing reference chrX_DS485300v1_random... [bam_rmdup_core] processing reference chrX_DS484260v1_random... [bam_rmdup_core] processing reference chrX_DS484444v1_random... [bam_rmdup_core] processing reference chrX_DS484694v1_random... [bam_rmdup_core] processing reference chrX_DS484677v1_random... [bam_rmdup_core] processing reference chrX_DS484777v1_random... [bam_rmdup_core] processing reference chrX_DS485617v1_random... [bam_rmdup_core] processing reference chrX_DS484839v1_random... [bam_rmdup_core] processing reference chrX_DS485080v1_random... [bam_rmdup_core] processing reference chrX_DS484560v1_random... [bam_rmdup_core] processing reference chrX_DS484928v1_random... [bam_rmdup_core] processing reference chrX_DS484775v1_random... [bam_rmdup_core] processing reference chrX_DS484535v1_random... [bam_rmdup_core] processing reference chrX_DS484725v1_random... [bam_rmdup_core] processing reference chrX_DS484682v1_random... [bam_rmdup_core] processing reference chrX_DS484618v1_random... [bam_rmdup_core] processing reference chrX_DS484952v1_random... [bam_rmdup_core] processing reference chrX_DS484599v1_random... [bam_rmdup_core] processing reference chrX_DS484072v1_random... [bam_rmdup_core] processing reference chrX_DS484137v1_random... [bam_rmdup_core] processing reference chrX_DS485836v1_random... [bam_rmdup_core] processing reference chrX_DS484419v1_random... [bam_rmdup_core] processing reference chrX_DS484357v1_random... [bam_rmdup_core] processing reference chrX_DS485798v1_random... [bam_rmdup_core] processing reference chrX_DS484344v1_random... [bam_rmdup_core] processing reference chrX_DS484623v1_random... [bam_rmdup_core] processing reference chrX_DS485537v1_random... [bam_rmdup_core] processing reference chrX_DS484057v1_random... [bam_rmdup_core] processing reference chrX_DS485899v1_random... [bam_rmdup_core] processing reference chrX_DS484832v1_random... [bam_rmdup_core] processing reference chrX_DS485950v1_random... [bam_rmdup_core] processing reference chrX_DS483995v1_random... [bam_rmdup_core] processing reference chrX_DS485603v1_random... [bam_rmdup_core] processing reference chrX_DS484733v1_random... [bam_rmdup_core] processing reference chrX_DS484541v1_random... [bam_rmdup_core] processing reference chrX_DS484085v1_random... [bam_rmdup_core] processing reference chrX_DS484165v1_random... [bam_rmdup_core] processing reference chrX_DS485271v1_random... [bam_rmdup_core] processing reference chrX_DS485790v1_random... [bam_rmdup_core] processing reference chrX_DS484753v1_random... [bam_rmdup_core] processing reference chrX_DS484645v1_random... [bam_rmdup_core] processing reference chrX_DS484669v1_random... [bam_rmdup_core] processing reference chrX_DS484162v1_random... [bam_rmdup_core] processing reference chrX_DS484374v1_random... [bam_rmdup_core] processing reference chrX_DS485189v1_random... [bam_rmdup_core] processing reference chrX_DS484603v1_random... [bam_rmdup_core] processing reference chrX_DS485195v1_random... [bam_rmdup_core] processing reference chrX_DS484580v1_random... [bam_rmdup_core] processing reference chrX_DS485351v1_random... [bam_rmdup_core] processing reference chrX_DS484433v1_random... [bam_rmdup_core] processing reference chrX_DS485738v1_random... [bam_rmdup_core] processing reference chrX_DS484423v1_random... [bam_rmdup_core] processing reference chrX_DS485879v1_random... [bam_rmdup_core] processing reference chrX_DS484702v1_random... [bam_rmdup_core] processing reference chrX_DS485762v1_random... [bam_rmdup_core] processing reference chrX_DS485012v1_random... [bam_rmdup_core] processing reference chrX_DS484474v1_random... [bam_rmdup_core] processing reference chrX_DS485278v1_random... [bam_rmdup_core] processing reference chrX_DS484322v1_random... [bam_rmdup_core] processing reference chrX_DS484974v1_random... [bam_rmdup_core] processing reference chrX_DS484135v1_random... [bam_rmdup_core] processing reference chrX_DS484826v1_random... [bam_rmdup_core] processing reference chrX_DS485816v1_random... [bam_rmdup_core] processing reference chrX_DS483665v1_random... [bam_rmdup_core] processing reference chrX_DS484067v1_random... [bam_rmdup_core] processing reference chrX_DS485672v1_random... [bam_rmdup_core] processing reference chrX_DS484005v1_random... [bam_rmdup_core] processing reference chrX_DS483971v1_random... [bam_rmdup_core] processing reference chrX_DS485303v1_random... [bam_rmdup_core] processing reference chrX_DS484143v1_random... [bam_rmdup_core] processing reference chrX_DS484346v1_random... [bam_rmdup_core] processing reference chrX_DS484384v1_random... [bam_rmdup_core] processing reference chrX_DS485857v1_random... [bam_rmdup_core] processing reference chrX_DS484319v1_random... [bam_rmdup_core] processing reference chrX_DS485225v1_random... [bam_rmdup_core] processing reference chrX_DS485268v1_random... [bam_rmdup_core] processing reference chrX_DS484293v1_random... [bam_rmdup_core] processing reference chrX_DS484715v1_random... [bam_rmdup_core] processing reference chrX_DS485454v1_random... [bam_rmdup_core] processing reference chrX_DS484130v1_random... [bam_rmdup_core] processing reference chrX_DS484359v1_random... [bam_rmdup_core] processing reference chrX_DS483784v1_random... [bam_rmdup_core] processing reference chrX_DS485119v1_random... [bam_rmdup_core] processing reference chrX_DS484462v1_random... [bam_rmdup_core] processing reference chrX_DS485647v1_random... [bam_rmdup_core] processing reference chrX_DS485078v1_random... [bam_rmdup_core] processing reference chrX_DS483905v1_random... [bam_rmdup_core] processing reference chrX_DS484963v1_random... [bam_rmdup_core] processing reference chrX_DS483685v1_random... [bam_rmdup_core] processing reference chrX_DS484356v1_random... [bam_rmdup_core] processing reference chrX_DS485418v1_random... [bam_rmdup_core] processing reference chrX_DS484125v1_random... [bam_rmdup_core] processing reference chrX_DS484131v1_random... [bam_rmdup_core] processing reference chrX_DS484328v1_random... [bam_rmdup_core] processing reference chrX_DS483843v1_random... [bam_rmdup_core] processing reference chrX_DS484468v1_random... [bam_rmdup_core] processing reference chrX_DS485978v1_random... [bam_rmdup_core] processing reference chrX_DS485054v1_random... [bam_rmdup_core] processing reference chrX_DS483955v1_random... [bam_rmdup_core] processing reference chrX_DS483897v1_random... [bam_rmdup_core] processing reference chrX_DS484361v1_random... [bam_rmdup_core] processing reference chrX_DS485049v1_random... [bam_rmdup_core] processing reference chrX_DS484978v1_random... [bam_rmdup_core] processing reference chrX_DS484002v1_random... [bam_rmdup_core] processing reference chrX_DS485364v1_random... [bam_rmdup_core] processing reference chrX_DS484345v1_random... [bam_rmdup_core] processing reference chrX_DS485310v1_random... [bam_rmdup_core] processing reference chrX_DS485597v1_random... [bam_rmdup_core] processing reference chrX_DS485345v1_random... [bam_rmdup_core] processing reference chrX_DS484417v1_random... [bam_rmdup_core] processing reference chrX_DS483698v1_random... [bam_rmdup_core] processing reference chrX_DS484620v1_random... [bam_rmdup_core] processing reference chrX_DS485360v1_random... [bam_rmdup_core] processing reference chrX_DS485186v1_random... [bam_rmdup_core] processing reference chrX_DS485778v1_random... [bam_rmdup_core] processing reference chrX_DS485201v1_random... [bam_rmdup_core] processing reference chrX_DS485384v1_random... [bam_rmdup_core] processing reference chrX_DS485707v1_random... [bam_rmdup_core] processing reference chrX_DS483809v1_random... [bam_rmdup_core] processing reference chrX_DS484857v1_random... [bam_rmdup_core] processing reference chrX_DS484268v1_random... [bam_rmdup_core] processing reference chrX_DS484203v1_random... [bam_rmdup_core] processing reference chrX_DS484970v1_random... [bam_rmdup_core] processing reference chrX_DS483789v1_random... [bam_rmdup_core] processing reference chrX_DS484719v1_random... [bam_rmdup_core] processing reference chrX_DS484297v1_random... [bam_rmdup_core] processing reference chrX_DS484124v1_random... [bam_rmdup_core] processing reference chrX_DS485044v1_random... [bam_rmdup_core] processing reference chrX_DS484990v1_random... [bam_rmdup_core] processing reference chrX_DS484273v1_random... [bam_rmdup_core] processing reference chrX_DS485017v1_random... [bam_rmdup_core] processing reference chrX_DS484997v1_random... [bam_rmdup_core] processing reference chrX_DS483888v1_random... [bam_rmdup_core] processing reference chrX_DS484907v1_random... [bam_rmdup_core] processing reference chrX_DS485549v1_random... [bam_rmdup_core] processing reference chrX_DS484732v1_random... [bam_rmdup_core] processing reference chrX_DS483660v1_random... [bam_rmdup_core] processing reference chrX_DS484615v1_random... [bam_rmdup_core] processing reference chrX_DS484697v1_random... [bam_rmdup_core] processing reference chrX_DS484216v1_random... [bam_rmdup_core] processing reference chrX_DS485287v1_random... [bam_rmdup_core] processing reference chrX_DS484382v1_random... [bam_rmdup_core] processing reference chrX_DS484187v1_random... [bam_rmdup_core] processing reference chrX_DS484185v1_random... [bam_rmdup_core] processing reference chrX_DS485550v1_random... [bam_rmdup_core] processing reference chrX_DS483795v1_random... [bam_rmdup_core] processing reference chrX_DS484666v1_random... [bam_rmdup_core] processing reference chrX_DS484371v1_random... [bam_rmdup_core] processing reference chrX_DS483907v1_random... [bam_rmdup_core] processing reference chrX_DS484387v1_random... [bam_rmdup_core] processing reference chrX_DS484316v1_random... [bam_rmdup_core] processing reference chrX_DS483803v1_random... [bam_rmdup_core] processing reference chrX_DS483950v1_random... [bam_rmdup_core] processing reference chrX_DS483885v1_random... [bam_rmdup_core] processing reference chrX_DS483928v1_random... [bam_rmdup_core] processing reference chrX_DS484326v1_random... [bam_rmdup_core] processing reference chrX_DS483745v1_random... [bam_rmdup_core] processing reference chrX_DS483892v1_random... [bam_rmdup_core] processing reference chrX_DS484061v1_random... [bam_rmdup_core] processing reference chrX_DS484330v1_random... [bam_rmdup_core] processing reference chrX_DS484140v1_random... [bam_rmdup_core] processing reference chrX_DS484051v1_random... [bam_rmdup_core] processing reference chrX_DS483893v1_random... [bam_rmdup_core] processing reference chrX_DS484075v1_random... [bam_rmdup_core] processing reference chrX_DS483948v1_random... [bam_rmdup_core] processing reference chrX_DS484081v1_random... [bam_rmdup_core] processing reference chrX_DS484586v1_random... [bam_rmdup_core] processing reference chrX_DS484278v1_random... [bam_rmdup_core] processing reference chrX_DS484046v1_random... [bam_rmdup_core] processing reference chrX_DS484133v1_random... [bam_rmdup_core] processing reference chrX_DS483909v1_random... [bam_rmdup_core] processing reference chrX_DS484488v1_random... [bam_rmdup_core] processing reference chrX_DS483974v1_random... [bam_rmdup_core] processing reference chrX_DS483903v1_random... [bam_rmdup_core] processing reference chrX_DS484538v1_random... [bam_rmdup_core] processing reference chrX_DS483946v1_random... [bam_rmdup_core] processing reference chrX_DS484556v1_random... [bam_rmdup_core] processing reference chrX_DS483851v1_random... [bam_rmdup_core] processing reference chrX_DS483926v1_random... [bam_rmdup_core] processing reference chrX_DS484563v1_random... [bam_rmdup_core] processing reference chrX_DS483923v1_random... [bam_rmdup_core] processing reference chrX_DS484166v1_random... [bam_rmdup_core] processing reference chrX_DS484341v1_random... [bam_rmdup_core] processing reference chrX_DS484099v1_random... [bam_rmdup_core] processing reference chrX_DS484060v1_random... [bam_rmdup_core] processing reference chrX_DS484132v1_random... [bam_rmdup_core] processing reference chrX_DS483821v1_random... [bam_rmdup_core] processing reference chrX_DS483818v1_random... [bam_rmdup_core] processing reference chrX_DS483969v1_random... [bam_rmdup_core] processing reference chrX_DS484026v1_random... [bam_rmdup_core] processing reference chrX_CP007104v1_random... [bam_rmdup_core] processing reference chrX_CP007103v1_random... [bam_rmdup_core] processing reference chrY... [bam_rmdup_core] processing reference chrY_DS485113v1_random... [bam_rmdup_core] processing reference chrY_DS484992v1_random... [bam_rmdup_core] processing reference chrY_DS484021v1_random... [bam_rmdup_core] processing reference chrY_DS485016v1_random... [bam_rmdup_core] processing reference chrY_DS484142v1_random... [bam_rmdup_core] processing reference chrY_DS485375v1_random... [bam_rmdup_core] processing reference chrY_DS485865v1_random... [bam_rmdup_core] processing reference chrY_DS484643v1_random... [bam_rmdup_core] processing reference chrY_DS484146v1_random... [bam_rmdup_core] processing reference chrY_DS485795v1_random... [bam_rmdup_core] processing reference chrY_DS484259v1_random... [bam_rmdup_core] processing reference chrY_DS484681v1_random... [bam_rmdup_core] processing reference chrY_DS485927v1_random... [bam_rmdup_core] processing reference chrY_DS484164v1_random... [bam_rmdup_core] processing reference chrY_DS485423v1_random... [bam_rmdup_core] processing reference chrY_DS485051v1_random... [bam_rmdup_core] processing reference chrY_DS484781v1_random... [bam_rmdup_core] processing reference chrY_DS485840v1_random... [bam_rmdup_core] processing reference chrY_DS484492v1_random... [bam_rmdup_core] processing reference chrY_DS484818v1_random... [bam_rmdup_core] processing reference chrY_DS485575v1_random... [bam_rmdup_core] processing reference chrY_DS485696v1_random... [bam_rmdup_core] processing reference chrY_DS484665v1_random... [bam_rmdup_core] processing reference chrY_DS485752v1_random... [bam_rmdup_core] processing reference chrY_DS484706v1_random... [bam_rmdup_core] processing reference chrY_DS485399v1_random... [bam_rmdup_core] processing reference chrY_DS485560v1_random... [bam_rmdup_core] processing reference chrY_DS484249v1_random... [bam_rmdup_core] processing reference chrY_DS484994v1_random... [bam_rmdup_core] processing reference chrY_DS484336v1_random... [bam_rmdup_core] processing reference chrY_DS484909v1_random... [bam_rmdup_core] processing reference chrY_DS483967v1_random... [bam_rmdup_core] processing reference chrY_DS484063v1_random... [bam_rmdup_core] processing reference chrY_DS484696v1_random... [bam_rmdup_core] processing reference chrY_DS483790v1_random... [bam_rmdup_core] processing reference chrY_DS484171v1_random... [bam_rmdup_core] processing reference chrY_DS484181v1_random... [bam_rmdup_core] processing reference chrY_DS485888v1_random... [bam_rmdup_core] processing reference chrY_DS484531v1_random... [bam_rmdup_core] processing reference chrY_DS484807v1_random... [bam_rmdup_core] processing reference chrY_DS483931v1_random... [bam_rmdup_core] processing reference chrY_DS483996v1_random... [bam_rmdup_core] processing reference chrY_DS483875v1_random... [bam_rmdup_core] processing reference chrY_DS484029v1_random... [bam_rmdup_core] processing reference chrY_DS483677v1_random... [bam_rmdup_core] processing reference chrY_CP007109v1_random... [bam_rmdup_core] processing reference chrY_CP007110v1_random... [bam_rmdup_core] processing reference chrY_CP007111v1_random... [bam_rmdup_core] processing reference chrY_CP007112v1_random... [bam_rmdup_core] processing reference chrY_CP007113v1_random... [bam_rmdup_core] processing reference chrY_CP007114v1_random... [bam_rmdup_core] processing reference chrY_CP007115v1_random... [bam_rmdup_core] processing reference chrY_CP007117v1_random... [bam_rmdup_core] processing reference chrY_CP007118v1_random... [bam_rmdup_core] processing reference chrY_CP007107v1_random... [bam_rmdup_core] processing reference chrY_CP007108v1_random... [bam_rmdup_core] 358595 / 486367 = 0.7373 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 22:04:05: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 22:04:05: #1 read tag files... INFO @ Sun, 21 Jun 2020 22:04:05: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 22:04:07: #1 tag size is determined as 75 bps INFO @ Sun, 21 Jun 2020 22:04:07: #1 tag size = 75 INFO @ Sun, 21 Jun 2020 22:04:07: #1 total tags in treatment: 119144 INFO @ Sun, 21 Jun 2020 22:04:07: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 22:04:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 22:04:07: #1 tags after filtering in treatment: 110527 INFO @ Sun, 21 Jun 2020 22:04:07: #1 Redundant rate of treatment: 0.07 INFO @ Sun, 21 Jun 2020 22:04:07: #1 finished! INFO @ Sun, 21 Jun 2020 22:04:07: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 22:04:07: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 22:04:08: #2 number of paired peaks: 7511 INFO @ Sun, 21 Jun 2020 22:04:08: start model_add_line... INFO @ Sun, 21 Jun 2020 22:04:08: start X-correlation... INFO @ Sun, 21 Jun 2020 22:04:08: end of X-cor INFO @ Sun, 21 Jun 2020 22:04:08: #2 finished! INFO @ Sun, 21 Jun 2020 22:04:08: #2 predicted fragment length is 3 bps INFO @ Sun, 21 Jun 2020 22:04:08: #2 alternative fragment length(s) may be 3,143,155,226,242,283,320,349 bps INFO @ Sun, 21 Jun 2020 22:04:08: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.05_model.r WARNING @ Sun, 21 Jun 2020 22:04:08: #2 Since the d (3) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 22:04:08: #2 You may need to consider one of the other alternative d(s): 3,143,155,226,242,283,320,349 WARNING @ Sun, 21 Jun 2020 22:04:08: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 22:04:08: #3 Call peaks... INFO @ Sun, 21 Jun 2020 22:04:08: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 22:04:08: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 22:04:08: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.05_peaks.xls INFO @ Sun, 21 Jun 2020 22:04:08: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.05_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 22:04:08: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.05_summits.bed INFO @ Sun, 21 Jun 2020 22:04:08: Done! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 22:04:35: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 22:04:35: #1 read tag files... INFO @ Sun, 21 Jun 2020 22:04:35: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 22:04:37: #1 tag size is determined as 75 bps INFO @ Sun, 21 Jun 2020 22:04:37: #1 tag size = 75 INFO @ Sun, 21 Jun 2020 22:04:37: #1 total tags in treatment: 119144 INFO @ Sun, 21 Jun 2020 22:04:37: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 22:04:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 22:04:37: #1 tags after filtering in treatment: 110527 INFO @ Sun, 21 Jun 2020 22:04:37: #1 Redundant rate of treatment: 0.07 INFO @ Sun, 21 Jun 2020 22:04:37: #1 finished! INFO @ Sun, 21 Jun 2020 22:04:37: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 22:04:37: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 22:04:38: #2 number of paired peaks: 7511 INFO @ Sun, 21 Jun 2020 22:04:38: start model_add_line... INFO @ Sun, 21 Jun 2020 22:04:38: start X-correlation... INFO @ Sun, 21 Jun 2020 22:04:38: end of X-cor INFO @ Sun, 21 Jun 2020 22:04:38: #2 finished! INFO @ Sun, 21 Jun 2020 22:04:38: #2 predicted fragment length is 3 bps INFO @ Sun, 21 Jun 2020 22:04:38: #2 alternative fragment length(s) may be 3,143,155,226,242,283,320,349 bps INFO @ Sun, 21 Jun 2020 22:04:38: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.10_model.r WARNING @ Sun, 21 Jun 2020 22:04:38: #2 Since the d (3) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 22:04:38: #2 You may need to consider one of the other alternative d(s): 3,143,155,226,242,283,320,349 WARNING @ Sun, 21 Jun 2020 22:04:38: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 22:04:38: #3 Call peaks... INFO @ Sun, 21 Jun 2020 22:04:38: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 22:04:38: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 22:04:38: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.10_peaks.xls INFO @ Sun, 21 Jun 2020 22:04:38: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.10_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 22:04:38: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.10_summits.bed INFO @ Sun, 21 Jun 2020 22:04:38: Done! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 22:05:05: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 22:05:05: #1 read tag files... INFO @ Sun, 21 Jun 2020 22:05:05: #1 read treatment tags... BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。 INFO @ Sun, 21 Jun 2020 22:05:07: #1 tag size is determined as 75 bps INFO @ Sun, 21 Jun 2020 22:05:07: #1 tag size = 75 INFO @ Sun, 21 Jun 2020 22:05:07: #1 total tags in treatment: 119144 INFO @ Sun, 21 Jun 2020 22:05:07: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 22:05:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 22:05:07: #1 tags after filtering in treatment: 110527 INFO @ Sun, 21 Jun 2020 22:05:07: #1 Redundant rate of treatment: 0.07 INFO @ Sun, 21 Jun 2020 22:05:07: #1 finished! INFO @ Sun, 21 Jun 2020 22:05:07: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 22:05:07: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 22:05:08: #2 number of paired peaks: 7511 INFO @ Sun, 21 Jun 2020 22:05:08: start model_add_line... INFO @ Sun, 21 Jun 2020 22:05:08: start X-correlation... INFO @ Sun, 21 Jun 2020 22:05:08: end of X-cor INFO @ Sun, 21 Jun 2020 22:05:08: #2 finished! INFO @ Sun, 21 Jun 2020 22:05:08: #2 predicted fragment length is 3 bps INFO @ Sun, 21 Jun 2020 22:05:08: #2 alternative fragment length(s) may be 3,143,155,226,242,283,320,349 bps INFO @ Sun, 21 Jun 2020 22:05:08: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.20_model.r WARNING @ Sun, 21 Jun 2020 22:05:08: #2 Since the d (3) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 22:05:08: #2 You may need to consider one of the other alternative d(s): 3,143,155,226,242,283,320,349 WARNING @ Sun, 21 Jun 2020 22:05:08: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 22:05:08: #3 Call peaks... INFO @ Sun, 21 Jun 2020 22:05:08: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 22:05:08: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 22:05:08: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.20_peaks.xls INFO @ Sun, 21 Jun 2020 22:05:08: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.20_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 22:05:08: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX6441111/SRX6441111.20_summits.bed INFO @ Sun, 21 Jun 2020 22:05:08: Done! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling