Job ID = 6456836 SRX = SRX3981723 Genome = dm6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-06-21T11:25:09 prefetch.2.10.7: 1) Downloading 'SRR7050581'... 2020-06-21T11:25:09 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T11:26:41 prefetch.2.10.7: HTTPS download succeed 2020-06-21T11:26:42 prefetch.2.10.7: 'SRR7050581' is valid 2020-06-21T11:26:42 prefetch.2.10.7: 1) 'SRR7050581' was downloaded successfully 2020-06-21T11:26:42 prefetch.2.10.7: 'SRR7050581' has 0 unresolved dependencies Read 13610938 spots for SRR7050581/SRR7050581.sra Written 13610938 spots for SRR7050581/SRR7050581.sra 2020-06-21T11:27:35 prefetch.2.10.7: 1) Downloading 'SRR7050582'... 2020-06-21T11:27:35 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T11:28:49 prefetch.2.10.7: HTTPS download succeed 2020-06-21T11:28:49 prefetch.2.10.7: 'SRR7050582' is valid 2020-06-21T11:28:49 prefetch.2.10.7: 1) 'SRR7050582' was downloaded successfully 2020-06-21T11:28:49 prefetch.2.10.7: 'SRR7050582' has 0 unresolved dependencies Read 13774023 spots for SRR7050582/SRR7050582.sra Written 13774023 spots for SRR7050582/SRR7050582.sra 2020-06-21T11:29:45 prefetch.2.10.7: 1) Downloading 'SRR7050583'... 2020-06-21T11:29:45 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T11:31:38 prefetch.2.10.7: HTTPS download succeed 2020-06-21T11:31:38 prefetch.2.10.7: 'SRR7050583' is valid 2020-06-21T11:31:38 prefetch.2.10.7: 1) 'SRR7050583' was downloaded successfully 2020-06-21T11:31:38 prefetch.2.10.7: 'SRR7050583' has 0 unresolved dependencies Read 13819355 spots for SRR7050583/SRR7050583.sra Written 13819355 spots for SRR7050583/SRR7050583.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:11:30 41204316 reads; of these: 41204316 (100.00%) were unpaired; of these: 1239051 (3.01%) aligned 0 times 28970984 (70.31%) aligned exactly 1 time 10994281 (26.68%) aligned >1 times 96.99% overall alignment rate Time searching: 00:11:31 Overall time: 00:11:31 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 1870 sequences. [bam_sort_core] merging from 20 files... [bam_rmdupse_core] 5761843 / 39965265 = 0.1442 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 20:52:20: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 20:52:20: #1 read tag files... INFO @ Sun, 21 Jun 2020 20:52:20: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 20:52:26: 1000000 INFO @ Sun, 21 Jun 2020 20:52:31: 2000000 INFO @ Sun, 21 Jun 2020 20:52:37: 3000000 INFO @ Sun, 21 Jun 2020 20:52:42: 4000000 INFO @ Sun, 21 Jun 2020 20:52:48: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 20:52:50: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 20:52:50: #1 read tag files... INFO @ Sun, 21 Jun 2020 20:52:50: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 20:52:53: 6000000 INFO @ Sun, 21 Jun 2020 20:52:56: 1000000 INFO @ Sun, 21 Jun 2020 20:53:00: 7000000 INFO @ Sun, 21 Jun 2020 20:53:02: 2000000 INFO @ Sun, 21 Jun 2020 20:53:06: 8000000 INFO @ Sun, 21 Jun 2020 20:53:08: 3000000 INFO @ Sun, 21 Jun 2020 20:53:12: 9000000 INFO @ Sun, 21 Jun 2020 20:53:15: 4000000 INFO @ Sun, 21 Jun 2020 20:53:18: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 20:53:20: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 20:53:20: #1 read tag files... INFO @ Sun, 21 Jun 2020 20:53:20: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 20:53:21: 5000000 INFO @ Sun, 21 Jun 2020 20:53:24: 11000000 INFO @ Sun, 21 Jun 2020 20:53:26: 1000000 INFO @ Sun, 21 Jun 2020 20:53:27: 6000000 INFO @ Sun, 21 Jun 2020 20:53:30: 12000000 INFO @ Sun, 21 Jun 2020 20:53:33: 2000000 INFO @ Sun, 21 Jun 2020 20:53:33: 7000000 INFO @ Sun, 21 Jun 2020 20:53:37: 13000000 INFO @ Sun, 21 Jun 2020 20:53:39: 3000000 INFO @ Sun, 21 Jun 2020 20:53:39: 8000000 INFO @ Sun, 21 Jun 2020 20:53:43: 14000000 INFO @ Sun, 21 Jun 2020 20:53:45: 4000000 INFO @ Sun, 21 Jun 2020 20:53:45: 9000000 INFO @ Sun, 21 Jun 2020 20:53:49: 15000000 INFO @ Sun, 21 Jun 2020 20:53:51: 5000000 INFO @ Sun, 21 Jun 2020 20:53:51: 10000000 INFO @ Sun, 21 Jun 2020 20:53:55: 16000000 INFO @ Sun, 21 Jun 2020 20:53:57: 6000000 INFO @ Sun, 21 Jun 2020 20:53:58: 11000000 INFO @ Sun, 21 Jun 2020 20:54:02: 17000000 INFO @ Sun, 21 Jun 2020 20:54:03: 7000000 INFO @ Sun, 21 Jun 2020 20:54:04: 12000000 INFO @ Sun, 21 Jun 2020 20:54:08: 18000000 INFO @ Sun, 21 Jun 2020 20:54:09: 8000000 INFO @ Sun, 21 Jun 2020 20:54:10: 13000000 INFO @ Sun, 21 Jun 2020 20:54:14: 19000000 INFO @ Sun, 21 Jun 2020 20:54:16: 9000000 INFO @ Sun, 21 Jun 2020 20:54:16: 14000000 INFO @ Sun, 21 Jun 2020 20:54:20: 20000000 INFO @ Sun, 21 Jun 2020 20:54:22: 10000000 INFO @ Sun, 21 Jun 2020 20:54:22: 15000000 INFO @ Sun, 21 Jun 2020 20:54:27: 21000000 INFO @ Sun, 21 Jun 2020 20:54:28: 11000000 INFO @ Sun, 21 Jun 2020 20:54:28: 16000000 INFO @ Sun, 21 Jun 2020 20:54:33: 22000000 INFO @ Sun, 21 Jun 2020 20:54:34: 12000000 INFO @ Sun, 21 Jun 2020 20:54:34: 17000000 INFO @ Sun, 21 Jun 2020 20:54:39: 23000000 INFO @ Sun, 21 Jun 2020 20:54:40: 13000000 INFO @ Sun, 21 Jun 2020 20:54:41: 18000000 INFO @ Sun, 21 Jun 2020 20:54:46: 24000000 INFO @ Sun, 21 Jun 2020 20:54:46: 14000000 INFO @ Sun, 21 Jun 2020 20:54:47: 19000000 INFO @ Sun, 21 Jun 2020 20:54:52: 25000000 INFO @ Sun, 21 Jun 2020 20:54:52: 15000000 INFO @ Sun, 21 Jun 2020 20:54:53: 20000000 INFO @ Sun, 21 Jun 2020 20:54:58: 26000000 INFO @ Sun, 21 Jun 2020 20:54:59: 16000000 INFO @ Sun, 21 Jun 2020 20:55:00: 21000000 INFO @ Sun, 21 Jun 2020 20:55:05: 27000000 INFO @ Sun, 21 Jun 2020 20:55:05: 17000000 INFO @ Sun, 21 Jun 2020 20:55:06: 22000000 INFO @ Sun, 21 Jun 2020 20:55:12: 28000000 INFO @ Sun, 21 Jun 2020 20:55:12: 18000000 INFO @ Sun, 21 Jun 2020 20:55:13: 23000000 INFO @ Sun, 21 Jun 2020 20:55:19: 19000000 INFO @ Sun, 21 Jun 2020 20:55:19: 29000000 INFO @ Sun, 21 Jun 2020 20:55:19: 24000000 INFO @ Sun, 21 Jun 2020 20:55:25: 20000000 INFO @ Sun, 21 Jun 2020 20:55:25: 30000000 INFO @ Sun, 21 Jun 2020 20:55:26: 25000000 INFO @ Sun, 21 Jun 2020 20:55:32: 21000000 INFO @ Sun, 21 Jun 2020 20:55:32: 31000000 INFO @ Sun, 21 Jun 2020 20:55:32: 26000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sun, 21 Jun 2020 20:55:38: 22000000 INFO @ Sun, 21 Jun 2020 20:55:38: 27000000 INFO @ Sun, 21 Jun 2020 20:55:38: 32000000 INFO @ Sun, 21 Jun 2020 20:55:44: 23000000 INFO @ Sun, 21 Jun 2020 20:55:45: 28000000 INFO @ Sun, 21 Jun 2020 20:55:45: 33000000 INFO @ Sun, 21 Jun 2020 20:55:51: 24000000 INFO @ Sun, 21 Jun 2020 20:55:51: 29000000 INFO @ Sun, 21 Jun 2020 20:55:51: 34000000 INFO @ Sun, 21 Jun 2020 20:55:53: #1 tag size is determined as 51 bps INFO @ Sun, 21 Jun 2020 20:55:53: #1 tag size = 51 INFO @ Sun, 21 Jun 2020 20:55:53: #1 total tags in treatment: 34203422 INFO @ Sun, 21 Jun 2020 20:55:53: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 20:55:53: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 20:55:54: #1 tags after filtering in treatment: 34203375 INFO @ Sun, 21 Jun 2020 20:55:54: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 20:55:54: #1 finished! INFO @ Sun, 21 Jun 2020 20:55:54: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 20:55:54: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 20:55:56: #2 number of paired peaks: 215 WARNING @ Sun, 21 Jun 2020 20:55:56: Fewer paired peaks (215) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 215 pairs to build model! INFO @ Sun, 21 Jun 2020 20:55:56: start model_add_line... INFO @ Sun, 21 Jun 2020 20:55:56: start X-correlation... INFO @ Sun, 21 Jun 2020 20:55:56: end of X-cor INFO @ Sun, 21 Jun 2020 20:55:56: #2 finished! INFO @ Sun, 21 Jun 2020 20:55:56: #2 predicted fragment length is 1 bps INFO @ Sun, 21 Jun 2020 20:55:56: #2 alternative fragment length(s) may be 1,36,54,535,597 bps INFO @ Sun, 21 Jun 2020 20:55:56: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.05_model.r WARNING @ Sun, 21 Jun 2020 20:55:56: #2 Since the d (1) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 20:55:56: #2 You may need to consider one of the other alternative d(s): 1,36,54,535,597 WARNING @ Sun, 21 Jun 2020 20:55:56: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 20:55:56: #3 Call peaks... INFO @ Sun, 21 Jun 2020 20:55:56: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 20:55:57: 25000000 INFO @ Sun, 21 Jun 2020 20:55:58: 30000000 INFO @ Sun, 21 Jun 2020 20:56:03: 26000000 INFO @ Sun, 21 Jun 2020 20:56:04: 31000000 INFO @ Sun, 21 Jun 2020 20:56:10: 27000000 INFO @ Sun, 21 Jun 2020 20:56:10: 32000000 INFO @ Sun, 21 Jun 2020 20:56:16: 28000000 INFO @ Sun, 21 Jun 2020 20:56:17: 33000000 INFO @ Sun, 21 Jun 2020 20:56:23: 29000000 INFO @ Sun, 21 Jun 2020 20:56:23: 34000000 INFO @ Sun, 21 Jun 2020 20:56:25: #1 tag size is determined as 51 bps INFO @ Sun, 21 Jun 2020 20:56:25: #1 tag size = 51 INFO @ Sun, 21 Jun 2020 20:56:25: #1 total tags in treatment: 34203422 INFO @ Sun, 21 Jun 2020 20:56:25: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 20:56:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 20:56:25: #1 tags after filtering in treatment: 34203375 INFO @ Sun, 21 Jun 2020 20:56:25: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 20:56:25: #1 finished! INFO @ Sun, 21 Jun 2020 20:56:25: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 20:56:25: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 20:56:27: #2 number of paired peaks: 215 WARNING @ Sun, 21 Jun 2020 20:56:27: Fewer paired peaks (215) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 215 pairs to build model! INFO @ Sun, 21 Jun 2020 20:56:27: start model_add_line... INFO @ Sun, 21 Jun 2020 20:56:28: start X-correlation... INFO @ Sun, 21 Jun 2020 20:56:28: end of X-cor INFO @ Sun, 21 Jun 2020 20:56:28: #2 finished! INFO @ Sun, 21 Jun 2020 20:56:28: #2 predicted fragment length is 1 bps INFO @ Sun, 21 Jun 2020 20:56:28: #2 alternative fragment length(s) may be 1,36,54,535,597 bps INFO @ Sun, 21 Jun 2020 20:56:28: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.10_model.r WARNING @ Sun, 21 Jun 2020 20:56:28: #2 Since the d (1) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 20:56:28: #2 You may need to consider one of the other alternative d(s): 1,36,54,535,597 WARNING @ Sun, 21 Jun 2020 20:56:28: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 20:56:28: #3 Call peaks... INFO @ Sun, 21 Jun 2020 20:56:28: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 20:56:29: 30000000 INFO @ Sun, 21 Jun 2020 20:56:34: 31000000 INFO @ Sun, 21 Jun 2020 20:56:40: 32000000 INFO @ Sun, 21 Jun 2020 20:56:46: 33000000 INFO @ Sun, 21 Jun 2020 20:56:47: #3 Call peaks for each chromosome... BigWig に変換しました。 INFO @ Sun, 21 Jun 2020 20:56:52: 34000000 INFO @ Sun, 21 Jun 2020 20:56:54: #1 tag size is determined as 51 bps INFO @ Sun, 21 Jun 2020 20:56:54: #1 tag size = 51 INFO @ Sun, 21 Jun 2020 20:56:54: #1 total tags in treatment: 34203422 INFO @ Sun, 21 Jun 2020 20:56:54: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 20:56:54: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 20:56:54: #1 tags after filtering in treatment: 34203375 INFO @ Sun, 21 Jun 2020 20:56:54: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 20:56:54: #1 finished! INFO @ Sun, 21 Jun 2020 20:56:54: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 20:56:54: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 20:56:57: #2 number of paired peaks: 215 WARNING @ Sun, 21 Jun 2020 20:56:57: Fewer paired peaks (215) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 215 pairs to build model! INFO @ Sun, 21 Jun 2020 20:56:57: start model_add_line... INFO @ Sun, 21 Jun 2020 20:56:57: start X-correlation... INFO @ Sun, 21 Jun 2020 20:56:57: end of X-cor INFO @ Sun, 21 Jun 2020 20:56:57: #2 finished! INFO @ Sun, 21 Jun 2020 20:56:57: #2 predicted fragment length is 1 bps INFO @ Sun, 21 Jun 2020 20:56:57: #2 alternative fragment length(s) may be 1,36,54,535,597 bps INFO @ Sun, 21 Jun 2020 20:56:57: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.20_model.r WARNING @ Sun, 21 Jun 2020 20:56:57: #2 Since the d (1) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 20:56:57: #2 You may need to consider one of the other alternative d(s): 1,36,54,535,597 WARNING @ Sun, 21 Jun 2020 20:56:57: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 20:56:57: #3 Call peaks... INFO @ Sun, 21 Jun 2020 20:56:57: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 20:57:10: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.05_peaks.xls INFO @ Sun, 21 Jun 2020 20:57:10: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.05_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 20:57:10: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.05_summits.bed INFO @ Sun, 21 Jun 2020 20:57:10: Done! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling INFO @ Sun, 21 Jun 2020 20:57:18: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 20:57:41: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.10_peaks.xls INFO @ Sun, 21 Jun 2020 20:57:41: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.10_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 20:57:41: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.10_summits.bed INFO @ Sun, 21 Jun 2020 20:57:41: Done! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling INFO @ Sun, 21 Jun 2020 20:57:47: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 20:58:10: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.20_peaks.xls INFO @ Sun, 21 Jun 2020 20:58:10: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.20_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 20:58:10: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX3981723/SRX3981723.20_summits.bed INFO @ Sun, 21 Jun 2020 20:58:10: Done! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling