Job ID = 6453887 SRX = SRX1550620 Genome = dm6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-06-21T08:37:25 prefetch.2.10.7: 1) Downloading 'SRR3130889'... 2020-06-21T08:37:25 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:38:09 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:38:09 prefetch.2.10.7: 'SRR3130889' is valid 2020-06-21T08:38:09 prefetch.2.10.7: 1) 'SRR3130889' was downloaded successfully Read 4000000 spots for SRR3130889/SRR3130889.sra Written 4000000 spots for SRR3130889/SRR3130889.sra 2020-06-21T08:38:31 prefetch.2.10.7: 1) Downloading 'SRR3130890'... 2020-06-21T08:38:31 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:39:52 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:39:53 prefetch.2.10.7: 'SRR3130890' is valid 2020-06-21T08:39:53 prefetch.2.10.7: 1) 'SRR3130890' was downloaded successfully Read 3985480 spots for SRR3130890/SRR3130890.sra Written 3985480 spots for SRR3130890/SRR3130890.sra 2020-06-21T08:40:15 prefetch.2.10.7: 1) Downloading 'SRR3130891'... 2020-06-21T08:40:15 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:41:24 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:41:25 prefetch.2.10.7: 'SRR3130891' is valid 2020-06-21T08:41:25 prefetch.2.10.7: 1) 'SRR3130891' was downloaded successfully Read 4000000 spots for SRR3130891/SRR3130891.sra Written 4000000 spots for SRR3130891/SRR3130891.sra 2020-06-21T08:41:47 prefetch.2.10.7: 1) Downloading 'SRR3130892'... 2020-06-21T08:41:47 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:43:10 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:43:10 prefetch.2.10.7: 'SRR3130892' is valid 2020-06-21T08:43:10 prefetch.2.10.7: 1) 'SRR3130892' was downloaded successfully Read 4000000 spots for SRR3130892/SRR3130892.sra Written 4000000 spots for SRR3130892/SRR3130892.sra 2020-06-21T08:43:33 prefetch.2.10.7: 1) Downloading 'SRR3130893'... 2020-06-21T08:43:33 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:44:26 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:44:27 prefetch.2.10.7: 'SRR3130893' is valid 2020-06-21T08:44:27 prefetch.2.10.7: 1) 'SRR3130893' was downloaded successfully Read 4000000 spots for SRR3130893/SRR3130893.sra Written 4000000 spots for SRR3130893/SRR3130893.sra 2020-06-21T08:44:48 prefetch.2.10.7: 1) Downloading 'SRR3130894'... 2020-06-21T08:44:48 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:45:34 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:45:35 prefetch.2.10.7: 'SRR3130894' is valid 2020-06-21T08:45:35 prefetch.2.10.7: 1) 'SRR3130894' was downloaded successfully Read 4000000 spots for SRR3130894/SRR3130894.sra Written 4000000 spots for SRR3130894/SRR3130894.sra 2020-06-21T08:45:57 prefetch.2.10.7: 1) Downloading 'SRR3130895'... 2020-06-21T08:45:57 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:47:20 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:47:20 prefetch.2.10.7: 'SRR3130895' is valid 2020-06-21T08:47:20 prefetch.2.10.7: 1) 'SRR3130895' was downloaded successfully Read 4000000 spots for SRR3130895/SRR3130895.sra Written 4000000 spots for SRR3130895/SRR3130895.sra 2020-06-21T08:47:43 prefetch.2.10.7: 1) Downloading 'SRR3130896'... 2020-06-21T08:47:43 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:48:22 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:48:22 prefetch.2.10.7: 'SRR3130896' is valid 2020-06-21T08:48:22 prefetch.2.10.7: 1) 'SRR3130896' was downloaded successfully Read 4000000 spots for SRR3130896/SRR3130896.sra Written 4000000 spots for SRR3130896/SRR3130896.sra 2020-06-21T08:48:44 prefetch.2.10.7: 1) Downloading 'SRR3130897'... 2020-06-21T08:48:44 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:49:38 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:49:38 prefetch.2.10.7: 'SRR3130897' is valid 2020-06-21T08:49:38 prefetch.2.10.7: 1) 'SRR3130897' was downloaded successfully Read 4000000 spots for SRR3130897/SRR3130897.sra Written 4000000 spots for SRR3130897/SRR3130897.sra 2020-06-21T08:50:00 prefetch.2.10.7: 1) Downloading 'SRR3130898'... 2020-06-21T08:50:00 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:50:45 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:50:45 prefetch.2.10.7: 'SRR3130898' is valid 2020-06-21T08:50:45 prefetch.2.10.7: 1) 'SRR3130898' was downloaded successfully Read 4000000 spots for SRR3130898/SRR3130898.sra Written 4000000 spots for SRR3130898/SRR3130898.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:10:15 39985480 reads; of these: 39985480 (100.00%) were unpaired; of these: 2351847 (5.88%) aligned 0 times 30308914 (75.80%) aligned exactly 1 time 7324719 (18.32%) aligned >1 times 94.12% overall alignment rate Time searching: 00:10:15 Overall time: 00:10:15 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 1870 sequences. [bam_sort_core] merging from 16 files... [bam_rmdupse_core] 8020492 / 37633633 = 0.2131 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 18:10:43: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 18:10:43: #1 read tag files... INFO @ Sun, 21 Jun 2020 18:10:43: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 18:10:49: 1000000 INFO @ Sun, 21 Jun 2020 18:10:55: 2000000 INFO @ Sun, 21 Jun 2020 18:11:01: 3000000 INFO @ Sun, 21 Jun 2020 18:11:07: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 18:11:12: 5000000 INFO @ Sun, 21 Jun 2020 18:11:13: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 18:11:13: #1 read tag files... INFO @ Sun, 21 Jun 2020 18:11:13: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 18:11:18: 6000000 INFO @ Sun, 21 Jun 2020 18:11:18: 1000000 INFO @ Sun, 21 Jun 2020 18:11:24: 2000000 INFO @ Sun, 21 Jun 2020 18:11:24: 7000000 INFO @ Sun, 21 Jun 2020 18:11:29: 3000000 INFO @ Sun, 21 Jun 2020 18:11:29: 8000000 INFO @ Sun, 21 Jun 2020 18:11:34: 4000000 INFO @ Sun, 21 Jun 2020 18:11:35: 9000000 INFO @ Sun, 21 Jun 2020 18:11:39: 5000000 INFO @ Sun, 21 Jun 2020 18:11:41: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 18:11:43: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 18:11:43: #1 read tag files... INFO @ Sun, 21 Jun 2020 18:11:43: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 18:11:44: 6000000 INFO @ Sun, 21 Jun 2020 18:11:47: 11000000 INFO @ Sun, 21 Jun 2020 18:11:48: 1000000 INFO @ Sun, 21 Jun 2020 18:11:49: 7000000 INFO @ Sun, 21 Jun 2020 18:11:53: 12000000 INFO @ Sun, 21 Jun 2020 18:11:54: 2000000 INFO @ Sun, 21 Jun 2020 18:11:55: 8000000 INFO @ Sun, 21 Jun 2020 18:11:59: 13000000 INFO @ Sun, 21 Jun 2020 18:11:59: 3000000 INFO @ Sun, 21 Jun 2020 18:12:00: 9000000 INFO @ Sun, 21 Jun 2020 18:12:04: 4000000 INFO @ Sun, 21 Jun 2020 18:12:05: 14000000 INFO @ Sun, 21 Jun 2020 18:12:05: 10000000 INFO @ Sun, 21 Jun 2020 18:12:09: 5000000 INFO @ Sun, 21 Jun 2020 18:12:10: 11000000 INFO @ Sun, 21 Jun 2020 18:12:11: 15000000 INFO @ Sun, 21 Jun 2020 18:12:15: 6000000 INFO @ Sun, 21 Jun 2020 18:12:15: 12000000 INFO @ Sun, 21 Jun 2020 18:12:17: 16000000 INFO @ Sun, 21 Jun 2020 18:12:20: 7000000 INFO @ Sun, 21 Jun 2020 18:12:21: 13000000 INFO @ Sun, 21 Jun 2020 18:12:23: 17000000 INFO @ Sun, 21 Jun 2020 18:12:25: 8000000 INFO @ Sun, 21 Jun 2020 18:12:26: 14000000 INFO @ Sun, 21 Jun 2020 18:12:29: 18000000 INFO @ Sun, 21 Jun 2020 18:12:30: 9000000 INFO @ Sun, 21 Jun 2020 18:12:31: 15000000 INFO @ Sun, 21 Jun 2020 18:12:34: 19000000 INFO @ Sun, 21 Jun 2020 18:12:35: 10000000 INFO @ Sun, 21 Jun 2020 18:12:36: 16000000 INFO @ Sun, 21 Jun 2020 18:12:40: 20000000 INFO @ Sun, 21 Jun 2020 18:12:41: 11000000 INFO @ Sun, 21 Jun 2020 18:12:42: 17000000 INFO @ Sun, 21 Jun 2020 18:12:46: 12000000 INFO @ Sun, 21 Jun 2020 18:12:46: 21000000 INFO @ Sun, 21 Jun 2020 18:12:47: 18000000 INFO @ Sun, 21 Jun 2020 18:12:51: 13000000 INFO @ Sun, 21 Jun 2020 18:12:52: 19000000 INFO @ Sun, 21 Jun 2020 18:12:52: 22000000 INFO @ Sun, 21 Jun 2020 18:12:56: 14000000 INFO @ Sun, 21 Jun 2020 18:12:57: 20000000 INFO @ Sun, 21 Jun 2020 18:12:58: 23000000 INFO @ Sun, 21 Jun 2020 18:13:01: 15000000 INFO @ Sun, 21 Jun 2020 18:13:02: 21000000 INFO @ Sun, 21 Jun 2020 18:13:05: 24000000 INFO @ Sun, 21 Jun 2020 18:13:07: 16000000 INFO @ Sun, 21 Jun 2020 18:13:07: 22000000 INFO @ Sun, 21 Jun 2020 18:13:10: 25000000 INFO @ Sun, 21 Jun 2020 18:13:12: 17000000 INFO @ Sun, 21 Jun 2020 18:13:13: 23000000 INFO @ Sun, 21 Jun 2020 18:13:16: 26000000 INFO @ Sun, 21 Jun 2020 18:13:17: 18000000 INFO @ Sun, 21 Jun 2020 18:13:18: 24000000 INFO @ Sun, 21 Jun 2020 18:13:22: 27000000 INFO @ Sun, 21 Jun 2020 18:13:22: 19000000 INFO @ Sun, 21 Jun 2020 18:13:23: 25000000 INFO @ Sun, 21 Jun 2020 18:13:27: 20000000 INFO @ Sun, 21 Jun 2020 18:13:28: 28000000 INFO @ Sun, 21 Jun 2020 18:13:28: 26000000 INFO @ Sun, 21 Jun 2020 18:13:32: 21000000 INFO @ Sun, 21 Jun 2020 18:13:33: 29000000 INFO @ Sun, 21 Jun 2020 18:13:34: 27000000 INFO @ Sun, 21 Jun 2020 18:13:37: #1 tag size is determined as 51 bps INFO @ Sun, 21 Jun 2020 18:13:37: #1 tag size = 51 INFO @ Sun, 21 Jun 2020 18:13:37: #1 total tags in treatment: 29613141 INFO @ Sun, 21 Jun 2020 18:13:37: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 18:13:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 18:13:37: 22000000 INFO @ Sun, 21 Jun 2020 18:13:38: #1 tags after filtering in treatment: 29613141 INFO @ Sun, 21 Jun 2020 18:13:38: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 18:13:38: #1 finished! INFO @ Sun, 21 Jun 2020 18:13:38: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 18:13:38: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 18:13:39: 28000000 INFO @ Sun, 21 Jun 2020 18:13:40: #2 number of paired peaks: 474 WARNING @ Sun, 21 Jun 2020 18:13:40: Fewer paired peaks (474) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 474 pairs to build model! INFO @ Sun, 21 Jun 2020 18:13:40: start model_add_line... INFO @ Sun, 21 Jun 2020 18:13:40: start X-correlation... INFO @ Sun, 21 Jun 2020 18:13:40: end of X-cor INFO @ Sun, 21 Jun 2020 18:13:40: #2 finished! INFO @ Sun, 21 Jun 2020 18:13:40: #2 predicted fragment length is 117 bps INFO @ Sun, 21 Jun 2020 18:13:40: #2 alternative fragment length(s) may be 117 bps INFO @ Sun, 21 Jun 2020 18:13:40: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.05_model.r INFO @ Sun, 21 Jun 2020 18:13:40: #3 Call peaks... INFO @ Sun, 21 Jun 2020 18:13:40: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 18:13:43: 23000000 INFO @ Sun, 21 Jun 2020 18:13:44: 29000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sun, 21 Jun 2020 18:13:47: #1 tag size is determined as 51 bps INFO @ Sun, 21 Jun 2020 18:13:47: #1 tag size = 51 INFO @ Sun, 21 Jun 2020 18:13:47: #1 total tags in treatment: 29613141 INFO @ Sun, 21 Jun 2020 18:13:47: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 18:13:47: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 18:13:48: 24000000 INFO @ Sun, 21 Jun 2020 18:13:48: #1 tags after filtering in treatment: 29613141 INFO @ Sun, 21 Jun 2020 18:13:48: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 18:13:48: #1 finished! INFO @ Sun, 21 Jun 2020 18:13:48: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 18:13:48: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 18:13:50: #2 number of paired peaks: 474 WARNING @ Sun, 21 Jun 2020 18:13:50: Fewer paired peaks (474) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 474 pairs to build model! INFO @ Sun, 21 Jun 2020 18:13:50: start model_add_line... INFO @ Sun, 21 Jun 2020 18:13:50: start X-correlation... INFO @ Sun, 21 Jun 2020 18:13:50: end of X-cor INFO @ Sun, 21 Jun 2020 18:13:50: #2 finished! INFO @ Sun, 21 Jun 2020 18:13:50: #2 predicted fragment length is 117 bps INFO @ Sun, 21 Jun 2020 18:13:50: #2 alternative fragment length(s) may be 117 bps INFO @ Sun, 21 Jun 2020 18:13:50: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.10_model.r INFO @ Sun, 21 Jun 2020 18:13:50: #3 Call peaks... INFO @ Sun, 21 Jun 2020 18:13:50: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 18:13:53: 25000000 INFO @ Sun, 21 Jun 2020 18:13:58: 26000000 INFO @ Sun, 21 Jun 2020 18:14:03: 27000000 INFO @ Sun, 21 Jun 2020 18:14:08: 28000000 INFO @ Sun, 21 Jun 2020 18:14:13: 29000000 INFO @ Sun, 21 Jun 2020 18:14:16: #1 tag size is determined as 51 bps INFO @ Sun, 21 Jun 2020 18:14:16: #1 tag size = 51 INFO @ Sun, 21 Jun 2020 18:14:16: #1 total tags in treatment: 29613141 INFO @ Sun, 21 Jun 2020 18:14:16: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 18:14:16: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 18:14:17: #1 tags after filtering in treatment: 29613141 INFO @ Sun, 21 Jun 2020 18:14:17: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 18:14:17: #1 finished! INFO @ Sun, 21 Jun 2020 18:14:17: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 18:14:17: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 18:14:19: #2 number of paired peaks: 474 WARNING @ Sun, 21 Jun 2020 18:14:19: Fewer paired peaks (474) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 474 pairs to build model! INFO @ Sun, 21 Jun 2020 18:14:19: start model_add_line... INFO @ Sun, 21 Jun 2020 18:14:19: start X-correlation... INFO @ Sun, 21 Jun 2020 18:14:19: end of X-cor INFO @ Sun, 21 Jun 2020 18:14:19: #2 finished! INFO @ Sun, 21 Jun 2020 18:14:19: #2 predicted fragment length is 117 bps INFO @ Sun, 21 Jun 2020 18:14:19: #2 alternative fragment length(s) may be 117 bps INFO @ Sun, 21 Jun 2020 18:14:19: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.20_model.r INFO @ Sun, 21 Jun 2020 18:14:19: #3 Call peaks... INFO @ Sun, 21 Jun 2020 18:14:19: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 18:14:34: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 18:14:42: #3 Call peaks for each chromosome... BigWig に変換しました。 INFO @ Sun, 21 Jun 2020 18:15:02: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.05_peaks.xls INFO @ Sun, 21 Jun 2020 18:15:03: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.05_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 18:15:03: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.05_summits.bed INFO @ Sun, 21 Jun 2020 18:15:03: Done! pass1 - making usageList (602 chroms): 2 millis pass2 - checking and writing primary data (12516 records, 4 fields): 26 millis CompletedMACS2peakCalling INFO @ Sun, 21 Jun 2020 18:15:10: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.10_peaks.xls INFO @ Sun, 21 Jun 2020 18:15:10: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.10_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 18:15:10: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.10_summits.bed INFO @ Sun, 21 Jun 2020 18:15:10: Done! pass1 - making usageList (503 chroms): 2 millis pass2 - checking and writing primary data (8800 records, 4 fields): 21 millis CompletedMACS2peakCalling INFO @ Sun, 21 Jun 2020 18:15:12: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 18:15:40: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.20_peaks.xls INFO @ Sun, 21 Jun 2020 18:15:40: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.20_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 18:15:40: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX1550620/SRX1550620.20_summits.bed INFO @ Sun, 21 Jun 2020 18:15:40: Done! pass1 - making usageList (432 chroms): 1 millis pass2 - checking and writing primary data (5492 records, 4 fields): 17 millis CompletedMACS2peakCalling