Job ID = 6453788 SRX = SRX1473023 Genome = dm6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-06-21T08:36:39 prefetch.2.10.7: 1) Downloading 'SRR2984042'... 2020-06-21T08:36:39 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:39:07 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:39:08 prefetch.2.10.7: 'SRR2984042' is valid 2020-06-21T08:39:08 prefetch.2.10.7: 1) 'SRR2984042' was downloaded successfully 2020-06-21T08:40:52 prefetch.2.10.7: 'SRR2984042' has 21 unresolved dependencies 2020-06-21T08:40:52 prefetch.2.10.7: 2) Downloading 'ncbi-acc:NC_000067.5?vdb-ctx=refseq'... 2020-06-21T08:40:52 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:41:21 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:41:21 prefetch.2.10.7: 2) 'ncbi-acc:NC_000067.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:41:21 prefetch.2.10.7: 3) Downloading 'ncbi-acc:NC_000068.6?vdb-ctx=refseq'... 2020-06-21T08:41:21 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:41:44 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:41:44 prefetch.2.10.7: 3) 'ncbi-acc:NC_000068.6?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:41:44 prefetch.2.10.7: 4) Downloading 'ncbi-acc:NC_000069.5?vdb-ctx=refseq'... 2020-06-21T08:41:44 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:42:12 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:42:12 prefetch.2.10.7: 4) 'ncbi-acc:NC_000069.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:42:12 prefetch.2.10.7: 5) Downloading 'ncbi-acc:NC_000070.5?vdb-ctx=refseq'... 2020-06-21T08:42:12 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:42:44 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:42:44 prefetch.2.10.7: 5) 'ncbi-acc:NC_000070.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:42:44 prefetch.2.10.7: 6) Downloading 'ncbi-acc:NC_000071.5?vdb-ctx=refseq'... 2020-06-21T08:42:44 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:43:20 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:43:20 prefetch.2.10.7: 6) 'ncbi-acc:NC_000071.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:43:20 prefetch.2.10.7: 7) Downloading 'ncbi-acc:NC_000072.5?vdb-ctx=refseq'... 2020-06-21T08:43:20 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:43:46 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:43:46 prefetch.2.10.7: 7) 'ncbi-acc:NC_000072.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:43:46 prefetch.2.10.7: 8) Downloading 'ncbi-acc:NC_000073.5?vdb-ctx=refseq'... 2020-06-21T08:43:46 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:44:14 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:44:14 prefetch.2.10.7: 8) 'ncbi-acc:NC_000073.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:44:14 prefetch.2.10.7: 9) Downloading 'ncbi-acc:NC_000074.5?vdb-ctx=refseq'... 2020-06-21T08:44:14 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:44:38 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:44:38 prefetch.2.10.7: 9) 'ncbi-acc:NC_000074.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:44:38 prefetch.2.10.7: 10) Downloading 'ncbi-acc:NC_000075.5?vdb-ctx=refseq'... 2020-06-21T08:44:38 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:45:00 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:45:00 prefetch.2.10.7: 10) 'ncbi-acc:NC_000075.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:45:00 prefetch.2.10.7: 11) Downloading 'ncbi-acc:NC_000076.5?vdb-ctx=refseq'... 2020-06-21T08:45:00 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:45:29 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:45:29 prefetch.2.10.7: 11) 'ncbi-acc:NC_000076.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:45:29 prefetch.2.10.7: 12) Downloading 'ncbi-acc:NC_000077.5?vdb-ctx=refseq'... 2020-06-21T08:45:29 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:45:54 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:45:54 prefetch.2.10.7: 12) 'ncbi-acc:NC_000077.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:45:54 prefetch.2.10.7: 13) Downloading 'ncbi-acc:NC_000078.5?vdb-ctx=refseq'... 2020-06-21T08:45:54 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:46:18 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:46:18 prefetch.2.10.7: 13) 'ncbi-acc:NC_000078.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:46:18 prefetch.2.10.7: 14) Downloading 'ncbi-acc:NC_000079.5?vdb-ctx=refseq'... 2020-06-21T08:46:18 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:47:07 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:47:07 prefetch.2.10.7: 14) 'ncbi-acc:NC_000079.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:47:07 prefetch.2.10.7: 15) Downloading 'ncbi-acc:NC_000080.5?vdb-ctx=refseq'... 2020-06-21T08:47:07 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:47:31 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:47:31 prefetch.2.10.7: 15) 'ncbi-acc:NC_000080.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:47:31 prefetch.2.10.7: 16) Downloading 'ncbi-acc:NC_000081.5?vdb-ctx=refseq'... 2020-06-21T08:47:31 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:48:00 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:48:00 prefetch.2.10.7: 16) 'ncbi-acc:NC_000081.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:48:00 prefetch.2.10.7: 17) Downloading 'ncbi-acc:NC_000082.5?vdb-ctx=refseq'... 2020-06-21T08:48:00 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:48:24 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:48:24 prefetch.2.10.7: 17) 'ncbi-acc:NC_000082.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:48:24 prefetch.2.10.7: 18) Downloading 'ncbi-acc:NC_000083.5?vdb-ctx=refseq'... 2020-06-21T08:48:24 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:48:58 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:48:58 prefetch.2.10.7: 18) 'ncbi-acc:NC_000083.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:48:58 prefetch.2.10.7: 19) Downloading 'ncbi-acc:NC_000084.5?vdb-ctx=refseq'... 2020-06-21T08:48:58 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:49:18 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:49:18 prefetch.2.10.7: 19) 'ncbi-acc:NC_000084.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:49:18 prefetch.2.10.7: 20) Downloading 'ncbi-acc:NC_000085.5?vdb-ctx=refseq'... 2020-06-21T08:49:18 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:49:44 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:49:44 prefetch.2.10.7: 20) 'ncbi-acc:NC_000085.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:49:44 prefetch.2.10.7: 21) Downloading 'ncbi-acc:NC_000086.6?vdb-ctx=refseq'... 2020-06-21T08:49:44 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:50:08 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:50:08 prefetch.2.10.7: 21) 'ncbi-acc:NC_000086.6?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:50:08 prefetch.2.10.7: 22) Downloading 'ncbi-acc:NC_000087.6?vdb-ctx=refseq'... 2020-06-21T08:50:08 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:50:21 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:50:21 prefetch.2.10.7: 22) 'ncbi-acc:NC_000087.6?vdb-ctx=refseq' was downloaded successfully Read 38839701 spots for SRR2984042/SRR2984042.sra Written 38839701 spots for SRR2984042/SRR2984042.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:04:25 38839701 reads; of these: 38839701 (100.00%) were unpaired; of these: 34297768 (88.31%) aligned 0 times 3139613 (8.08%) aligned exactly 1 time 1402320 (3.61%) aligned >1 times 11.69% overall alignment rate Time searching: 00:04:25 Overall time: 00:04:25 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 1870 sequences. [bam_rmdupse_core] 689855 / 4541933 = 0.1519 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 17:58:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 17:58:56: #1 read tag files... INFO @ Sun, 21 Jun 2020 17:58:56: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 17:59:01: 1000000 INFO @ Sun, 21 Jun 2020 17:59:07: 2000000 INFO @ Sun, 21 Jun 2020 17:59:12: 3000000 INFO @ Sun, 21 Jun 2020 17:59:18: #1 tag size is determined as 50 bps INFO @ Sun, 21 Jun 2020 17:59:18: #1 tag size = 50 INFO @ Sun, 21 Jun 2020 17:59:18: #1 total tags in treatment: 3852078 INFO @ Sun, 21 Jun 2020 17:59:18: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 17:59:18: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 17:59:18: #1 tags after filtering in treatment: 3851867 INFO @ Sun, 21 Jun 2020 17:59:18: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 17:59:18: #1 finished! INFO @ Sun, 21 Jun 2020 17:59:18: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 17:59:18: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 17:59:18: #2 number of paired peaks: 1021 INFO @ Sun, 21 Jun 2020 17:59:18: start model_add_line... INFO @ Sun, 21 Jun 2020 17:59:18: start X-correlation... INFO @ Sun, 21 Jun 2020 17:59:18: end of X-cor INFO @ Sun, 21 Jun 2020 17:59:18: #2 finished! INFO @ Sun, 21 Jun 2020 17:59:18: #2 predicted fragment length is 64 bps INFO @ Sun, 21 Jun 2020 17:59:18: #2 alternative fragment length(s) may be 4,64,570 bps INFO @ Sun, 21 Jun 2020 17:59:18: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.05_model.r WARNING @ Sun, 21 Jun 2020 17:59:18: #2 Since the d (64) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 17:59:18: #2 You may need to consider one of the other alternative d(s): 4,64,570 WARNING @ Sun, 21 Jun 2020 17:59:18: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 17:59:18: #3 Call peaks... INFO @ Sun, 21 Jun 2020 17:59:18: #3 Pre-compute pvalue-qvalue table... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 17:59:26: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 17:59:26: #1 read tag files... INFO @ Sun, 21 Jun 2020 17:59:26: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 17:59:27: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 17:59:32: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.05_peaks.xls INFO @ Sun, 21 Jun 2020 17:59:32: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.05_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 17:59:32: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.05_summits.bed INFO @ Sun, 21 Jun 2020 17:59:32: Done! pass1 - making usageList (156 chroms): 1 millis pass2 - checking and writing primary data (601 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Sun, 21 Jun 2020 17:59:32: 1000000 INFO @ Sun, 21 Jun 2020 17:59:39: 2000000 INFO @ Sun, 21 Jun 2020 17:59:45: 3000000 INFO @ Sun, 21 Jun 2020 17:59:51: #1 tag size is determined as 50 bps INFO @ Sun, 21 Jun 2020 17:59:51: #1 tag size = 50 INFO @ Sun, 21 Jun 2020 17:59:51: #1 total tags in treatment: 3852078 INFO @ Sun, 21 Jun 2020 17:59:51: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 17:59:51: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 17:59:52: #1 tags after filtering in treatment: 3851867 INFO @ Sun, 21 Jun 2020 17:59:52: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 17:59:52: #1 finished! INFO @ Sun, 21 Jun 2020 17:59:52: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 17:59:52: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 17:59:52: #2 number of paired peaks: 1021 INFO @ Sun, 21 Jun 2020 17:59:52: start model_add_line... INFO @ Sun, 21 Jun 2020 17:59:52: start X-correlation... INFO @ Sun, 21 Jun 2020 17:59:52: end of X-cor INFO @ Sun, 21 Jun 2020 17:59:52: #2 finished! INFO @ Sun, 21 Jun 2020 17:59:52: #2 predicted fragment length is 64 bps INFO @ Sun, 21 Jun 2020 17:59:52: #2 alternative fragment length(s) may be 4,64,570 bps INFO @ Sun, 21 Jun 2020 17:59:52: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.10_model.r WARNING @ Sun, 21 Jun 2020 17:59:52: #2 Since the d (64) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 17:59:52: #2 You may need to consider one of the other alternative d(s): 4,64,570 WARNING @ Sun, 21 Jun 2020 17:59:52: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 17:59:52: #3 Call peaks... INFO @ Sun, 21 Jun 2020 17:59:52: #3 Pre-compute pvalue-qvalue table... BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 17:59:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 17:59:56: #1 read tag files... INFO @ Sun, 21 Jun 2020 17:59:56: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 18:00:01: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 18:00:01: 1000000 INFO @ Sun, 21 Jun 2020 18:00:05: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.10_peaks.xls INFO @ Sun, 21 Jun 2020 18:00:05: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.10_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 18:00:05: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.10_summits.bed INFO @ Sun, 21 Jun 2020 18:00:05: Done! pass1 - making usageList (89 chroms): 1 millis pass2 - checking and writing primary data (279 records, 4 fields): 4 millis CompletedMACS2peakCalling INFO @ Sun, 21 Jun 2020 18:00:07: 2000000 INFO @ Sun, 21 Jun 2020 18:00:13: 3000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sun, 21 Jun 2020 18:00:18: #1 tag size is determined as 50 bps INFO @ Sun, 21 Jun 2020 18:00:18: #1 tag size = 50 INFO @ Sun, 21 Jun 2020 18:00:18: #1 total tags in treatment: 3852078 INFO @ Sun, 21 Jun 2020 18:00:18: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 18:00:18: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 18:00:19: #1 tags after filtering in treatment: 3851867 INFO @ Sun, 21 Jun 2020 18:00:19: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 18:00:19: #1 finished! INFO @ Sun, 21 Jun 2020 18:00:19: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 18:00:19: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 18:00:19: #2 number of paired peaks: 1021 INFO @ Sun, 21 Jun 2020 18:00:19: start model_add_line... INFO @ Sun, 21 Jun 2020 18:00:19: start X-correlation... INFO @ Sun, 21 Jun 2020 18:00:19: end of X-cor INFO @ Sun, 21 Jun 2020 18:00:19: #2 finished! INFO @ Sun, 21 Jun 2020 18:00:19: #2 predicted fragment length is 64 bps INFO @ Sun, 21 Jun 2020 18:00:19: #2 alternative fragment length(s) may be 4,64,570 bps INFO @ Sun, 21 Jun 2020 18:00:19: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.20_model.r WARNING @ Sun, 21 Jun 2020 18:00:19: #2 Since the d (64) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 18:00:19: #2 You may need to consider one of the other alternative d(s): 4,64,570 WARNING @ Sun, 21 Jun 2020 18:00:19: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 18:00:19: #3 Call peaks... INFO @ Sun, 21 Jun 2020 18:00:19: #3 Pre-compute pvalue-qvalue table... BigWig に変換しました。 INFO @ Sun, 21 Jun 2020 18:00:28: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 18:00:33: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.20_peaks.xls INFO @ Sun, 21 Jun 2020 18:00:33: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.20_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 18:00:33: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX1473023/SRX1473023.20_summits.bed INFO @ Sun, 21 Jun 2020 18:00:33: Done! pass1 - making usageList (39 chroms): 1 millis pass2 - checking and writing primary data (99 records, 4 fields): 2 millis CompletedMACS2peakCalling