Job ID = 6453786 SRX = SRX1473022 Genome = dm6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-06-21T08:41:47 prefetch.2.10.7: 1) Downloading 'SRR2984041'... 2020-06-21T08:41:47 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:45:34 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:45:34 prefetch.2.10.7: 1) 'SRR2984041' was downloaded successfully 2020-06-21T08:47:17 prefetch.2.10.7: 'SRR2984041' has 21 unresolved dependencies 2020-06-21T08:47:17 prefetch.2.10.7: 2) Downloading 'ncbi-acc:NC_000067.5?vdb-ctx=refseq'... 2020-06-21T08:47:17 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:47:52 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:47:52 prefetch.2.10.7: 2) 'ncbi-acc:NC_000067.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:47:52 prefetch.2.10.7: 3) Downloading 'ncbi-acc:NC_000068.6?vdb-ctx=refseq'... 2020-06-21T08:47:52 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:48:23 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:48:23 prefetch.2.10.7: 3) 'ncbi-acc:NC_000068.6?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:48:23 prefetch.2.10.7: 4) Downloading 'ncbi-acc:NC_000069.5?vdb-ctx=refseq'... 2020-06-21T08:48:23 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:49:00 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:49:00 prefetch.2.10.7: 4) 'ncbi-acc:NC_000069.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:49:00 prefetch.2.10.7: 5) Downloading 'ncbi-acc:NC_000070.5?vdb-ctx=refseq'... 2020-06-21T08:49:00 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:49:28 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:49:28 prefetch.2.10.7: 5) 'ncbi-acc:NC_000070.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:49:28 prefetch.2.10.7: 6) Downloading 'ncbi-acc:NC_000071.5?vdb-ctx=refseq'... 2020-06-21T08:49:28 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:49:52 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:49:52 prefetch.2.10.7: 6) 'ncbi-acc:NC_000071.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:49:52 prefetch.2.10.7: 7) Downloading 'ncbi-acc:NC_000072.5?vdb-ctx=refseq'... 2020-06-21T08:49:52 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:50:25 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:50:25 prefetch.2.10.7: 7) 'ncbi-acc:NC_000072.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:50:25 prefetch.2.10.7: 8) Downloading 'ncbi-acc:NC_000073.5?vdb-ctx=refseq'... 2020-06-21T08:50:25 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:51:00 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:51:00 prefetch.2.10.7: 8) 'ncbi-acc:NC_000073.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:51:00 prefetch.2.10.7: 9) Downloading 'ncbi-acc:NC_000074.5?vdb-ctx=refseq'... 2020-06-21T08:51:00 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:51:25 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:51:25 prefetch.2.10.7: 9) 'ncbi-acc:NC_000074.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:51:25 prefetch.2.10.7: 10) Downloading 'ncbi-acc:NC_000075.5?vdb-ctx=refseq'... 2020-06-21T08:51:25 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:51:49 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:51:49 prefetch.2.10.7: 10) 'ncbi-acc:NC_000075.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:51:49 prefetch.2.10.7: 11) Downloading 'ncbi-acc:NC_000076.5?vdb-ctx=refseq'... 2020-06-21T08:51:49 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:54:32 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:54:32 prefetch.2.10.7: 11) 'ncbi-acc:NC_000076.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:54:32 prefetch.2.10.7: 12) Downloading 'ncbi-acc:NC_000077.5?vdb-ctx=refseq'... 2020-06-21T08:54:32 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:54:55 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:54:55 prefetch.2.10.7: 12) 'ncbi-acc:NC_000077.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:54:55 prefetch.2.10.7: 13) Downloading 'ncbi-acc:NC_000078.5?vdb-ctx=refseq'... 2020-06-21T08:54:55 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:55:18 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:55:18 prefetch.2.10.7: 13) 'ncbi-acc:NC_000078.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:55:18 prefetch.2.10.7: 14) Downloading 'ncbi-acc:NC_000079.5?vdb-ctx=refseq'... 2020-06-21T08:55:18 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:55:47 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:55:47 prefetch.2.10.7: 14) 'ncbi-acc:NC_000079.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:55:47 prefetch.2.10.7: 15) Downloading 'ncbi-acc:NC_000080.5?vdb-ctx=refseq'... 2020-06-21T08:55:47 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:56:11 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:56:11 prefetch.2.10.7: 15) 'ncbi-acc:NC_000080.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:56:11 prefetch.2.10.7: 16) Downloading 'ncbi-acc:NC_000081.5?vdb-ctx=refseq'... 2020-06-21T08:56:11 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:56:34 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:56:34 prefetch.2.10.7: 16) 'ncbi-acc:NC_000081.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:56:34 prefetch.2.10.7: 17) Downloading 'ncbi-acc:NC_000082.5?vdb-ctx=refseq'... 2020-06-21T08:56:34 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:56:57 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:56:57 prefetch.2.10.7: 17) 'ncbi-acc:NC_000082.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:56:57 prefetch.2.10.7: 18) Downloading 'ncbi-acc:NC_000083.5?vdb-ctx=refseq'... 2020-06-21T08:56:57 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:57:22 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:57:22 prefetch.2.10.7: 18) 'ncbi-acc:NC_000083.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:57:22 prefetch.2.10.7: 19) Downloading 'ncbi-acc:NC_000084.5?vdb-ctx=refseq'... 2020-06-21T08:57:22 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:57:45 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:57:45 prefetch.2.10.7: 19) 'ncbi-acc:NC_000084.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:57:45 prefetch.2.10.7: 20) Downloading 'ncbi-acc:NC_000085.5?vdb-ctx=refseq'... 2020-06-21T08:57:45 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:58:05 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:58:05 prefetch.2.10.7: 20) 'ncbi-acc:NC_000085.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:58:05 prefetch.2.10.7: 21) Downloading 'ncbi-acc:NC_000086.6?vdb-ctx=refseq'... 2020-06-21T08:58:05 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:58:30 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:58:30 prefetch.2.10.7: 21) 'ncbi-acc:NC_000086.6?vdb-ctx=refseq' was downloaded successfully 2020-06-21T08:58:30 prefetch.2.10.7: 22) Downloading 'ncbi-acc:NC_000087.6?vdb-ctx=refseq'... 2020-06-21T08:58:30 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:58:43 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:58:43 prefetch.2.10.7: 22) 'ncbi-acc:NC_000087.6?vdb-ctx=refseq' was downloaded successfully Read 73873580 spots for SRR2984041/SRR2984041.sra Written 73873580 spots for SRR2984041/SRR2984041.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:11:46 73873580 reads; of these: 73873580 (100.00%) were unpaired; of these: 57436964 (77.75%) aligned 0 times 11705296 (15.85%) aligned exactly 1 time 4731320 (6.40%) aligned >1 times 22.25% overall alignment rate Time searching: 00:11:46 Overall time: 00:11:46 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 1870 sequences. [bam_sort_core] merging from 8 files... [bam_rmdupse_core] 6551710 / 16436616 = 0.3986 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 18:20:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 18:20:14: #1 read tag files... INFO @ Sun, 21 Jun 2020 18:20:14: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 18:20:19: 1000000 INFO @ Sun, 21 Jun 2020 18:20:25: 2000000 INFO @ Sun, 21 Jun 2020 18:20:30: 3000000 INFO @ Sun, 21 Jun 2020 18:20:36: 4000000 INFO @ Sun, 21 Jun 2020 18:20:42: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 18:20:44: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 18:20:44: #1 read tag files... INFO @ Sun, 21 Jun 2020 18:20:44: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 18:20:47: 6000000 INFO @ Sun, 21 Jun 2020 18:20:50: 1000000 INFO @ Sun, 21 Jun 2020 18:20:53: 7000000 INFO @ Sun, 21 Jun 2020 18:20:55: 2000000 INFO @ Sun, 21 Jun 2020 18:20:59: 8000000 INFO @ Sun, 21 Jun 2020 18:21:01: 3000000 INFO @ Sun, 21 Jun 2020 18:21:05: 9000000 INFO @ Sun, 21 Jun 2020 18:21:07: 4000000 INFO @ Sun, 21 Jun 2020 18:21:11: #1 tag size is determined as 50 bps INFO @ Sun, 21 Jun 2020 18:21:11: #1 tag size = 50 INFO @ Sun, 21 Jun 2020 18:21:11: #1 total tags in treatment: 9884906 INFO @ Sun, 21 Jun 2020 18:21:11: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 18:21:11: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 18:21:11: #1 tags after filtering in treatment: 9884804 INFO @ Sun, 21 Jun 2020 18:21:11: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 18:21:11: #1 finished! INFO @ Sun, 21 Jun 2020 18:21:11: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 18:21:11: #2 looking for paired plus/minus strand peaks... BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 18:21:12: #2 number of paired peaks: 2124 INFO @ Sun, 21 Jun 2020 18:21:12: start model_add_line... INFO @ Sun, 21 Jun 2020 18:21:12: start X-correlation... INFO @ Sun, 21 Jun 2020 18:21:12: end of X-cor INFO @ Sun, 21 Jun 2020 18:21:12: #2 finished! INFO @ Sun, 21 Jun 2020 18:21:12: #2 predicted fragment length is 112 bps INFO @ Sun, 21 Jun 2020 18:21:12: #2 alternative fragment length(s) may be 1,89,112 bps INFO @ Sun, 21 Jun 2020 18:21:12: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.05_model.r INFO @ Sun, 21 Jun 2020 18:21:12: #3 Call peaks... INFO @ Sun, 21 Jun 2020 18:21:12: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 18:21:13: 5000000 INFO @ Sun, 21 Jun 2020 18:21:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 18:21:14: #1 read tag files... INFO @ Sun, 21 Jun 2020 18:21:14: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 18:21:19: 6000000 INFO @ Sun, 21 Jun 2020 18:21:19: 1000000 INFO @ Sun, 21 Jun 2020 18:21:24: 2000000 INFO @ Sun, 21 Jun 2020 18:21:25: 7000000 INFO @ Sun, 21 Jun 2020 18:21:29: 3000000 INFO @ Sun, 21 Jun 2020 18:21:31: 8000000 INFO @ Sun, 21 Jun 2020 18:21:35: 4000000 INFO @ Sun, 21 Jun 2020 18:21:37: 9000000 INFO @ Sun, 21 Jun 2020 18:21:37: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 18:21:40: 5000000 INFO @ Sun, 21 Jun 2020 18:21:42: #1 tag size is determined as 50 bps INFO @ Sun, 21 Jun 2020 18:21:42: #1 tag size = 50 INFO @ Sun, 21 Jun 2020 18:21:42: #1 total tags in treatment: 9884906 INFO @ Sun, 21 Jun 2020 18:21:42: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 18:21:42: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 18:21:43: #1 tags after filtering in treatment: 9884804 INFO @ Sun, 21 Jun 2020 18:21:43: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 18:21:43: #1 finished! INFO @ Sun, 21 Jun 2020 18:21:43: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 18:21:43: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 18:21:44: #2 number of paired peaks: 2124 INFO @ Sun, 21 Jun 2020 18:21:44: start model_add_line... INFO @ Sun, 21 Jun 2020 18:21:44: start X-correlation... INFO @ Sun, 21 Jun 2020 18:21:44: end of X-cor INFO @ Sun, 21 Jun 2020 18:21:44: #2 finished! INFO @ Sun, 21 Jun 2020 18:21:44: #2 predicted fragment length is 112 bps INFO @ Sun, 21 Jun 2020 18:21:44: #2 alternative fragment length(s) may be 1,89,112 bps INFO @ Sun, 21 Jun 2020 18:21:44: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.10_model.r INFO @ Sun, 21 Jun 2020 18:21:44: #3 Call peaks... INFO @ Sun, 21 Jun 2020 18:21:44: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 18:21:45: 6000000 INFO @ Sun, 21 Jun 2020 18:21:50: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.05_peaks.xls INFO @ Sun, 21 Jun 2020 18:21:50: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.05_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 18:21:50: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.05_summits.bed INFO @ Sun, 21 Jun 2020 18:21:50: Done! INFO @ Sun, 21 Jun 2020 18:21:50: 7000000 pass1 - making usageList (203 chroms): 2 millis pass2 - checking and writing primary data (6278 records, 4 fields): 14 millis CompletedMACS2peakCalling INFO @ Sun, 21 Jun 2020 18:21:56: 8000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sun, 21 Jun 2020 18:22:01: 9000000 INFO @ Sun, 21 Jun 2020 18:22:06: #1 tag size is determined as 50 bps INFO @ Sun, 21 Jun 2020 18:22:06: #1 tag size = 50 INFO @ Sun, 21 Jun 2020 18:22:06: #1 total tags in treatment: 9884906 INFO @ Sun, 21 Jun 2020 18:22:06: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 18:22:06: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 18:22:06: #1 tags after filtering in treatment: 9884804 INFO @ Sun, 21 Jun 2020 18:22:06: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 18:22:06: #1 finished! INFO @ Sun, 21 Jun 2020 18:22:06: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 18:22:06: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 18:22:07: #2 number of paired peaks: 2124 INFO @ Sun, 21 Jun 2020 18:22:07: start model_add_line... INFO @ Sun, 21 Jun 2020 18:22:07: start X-correlation... INFO @ Sun, 21 Jun 2020 18:22:07: end of X-cor INFO @ Sun, 21 Jun 2020 18:22:07: #2 finished! INFO @ Sun, 21 Jun 2020 18:22:07: #2 predicted fragment length is 112 bps INFO @ Sun, 21 Jun 2020 18:22:07: #2 alternative fragment length(s) may be 1,89,112 bps INFO @ Sun, 21 Jun 2020 18:22:07: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.20_model.r INFO @ Sun, 21 Jun 2020 18:22:07: #3 Call peaks... INFO @ Sun, 21 Jun 2020 18:22:07: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 18:22:09: #3 Call peaks for each chromosome... BigWig に変換しました。 INFO @ Sun, 21 Jun 2020 18:22:21: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.10_peaks.xls INFO @ Sun, 21 Jun 2020 18:22:21: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.10_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 18:22:21: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.10_summits.bed INFO @ Sun, 21 Jun 2020 18:22:21: Done! pass1 - making usageList (143 chroms): 1 millis pass2 - checking and writing primary data (1210 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Sun, 21 Jun 2020 18:22:33: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 18:22:46: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.20_peaks.xls INFO @ Sun, 21 Jun 2020 18:22:46: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.20_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 18:22:46: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX1473022/SRX1473022.20_summits.bed INFO @ Sun, 21 Jun 2020 18:22:46: Done! pass1 - making usageList (92 chroms): 1 millis pass2 - checking and writing primary data (243 records, 4 fields): 4 millis CompletedMACS2peakCalling