Job ID = 6453652 SRX = SRX1342249 Genome = dm6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-06-21T08:34:39 prefetch.2.10.7: 1) Downloading 'SRR2672989'... 2020-06-21T08:34:39 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T08:53:18 prefetch.2.10.7: HTTPS download succeed 2020-06-21T08:53:18 prefetch.2.10.7: 1) 'SRR2672989' was downloaded successfully Read 86642787 spots for SRR2672989/SRR2672989.sra Written 86642787 spots for SRR2672989/SRR2672989.sra 2020-06-21T08:57:09 prefetch.2.10.7: 1) Downloading 'SRR2672990'... 2020-06-21T08:57:09 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T09:03:29 prefetch.2.10.7: HTTPS download succeed 2020-06-21T09:03:29 prefetch.2.10.7: 1) 'SRR2672990' was downloaded successfully Read 83098683 spots for SRR2672990/SRR2672990.sra Written 83098683 spots for SRR2672990/SRR2672990.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:32:59 169741470 reads; of these: 169741470 (100.00%) were unpaired; of these: 11138557 (6.56%) aligned 0 times 128584518 (75.75%) aligned exactly 1 time 30018395 (17.68%) aligned >1 times 93.44% overall alignment rate Time searching: 00:32:59 Overall time: 00:32:59 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 1870 sequences. [bam_sort_core] merging from 40 files... [bam_rmdupse_core] 114068318 / 158602913 = 0.7192 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 19:02:58: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 19:02:58: #1 read tag files... INFO @ Sun, 21 Jun 2020 19:02:58: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 19:03:03: 1000000 INFO @ Sun, 21 Jun 2020 19:03:07: 2000000 INFO @ Sun, 21 Jun 2020 19:03:12: 3000000 INFO @ Sun, 21 Jun 2020 19:03:16: 4000000 INFO @ Sun, 21 Jun 2020 19:03:21: 5000000 INFO @ Sun, 21 Jun 2020 19:03:25: 6000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 19:03:28: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 19:03:28: #1 read tag files... INFO @ Sun, 21 Jun 2020 19:03:28: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 19:03:30: 7000000 INFO @ Sun, 21 Jun 2020 19:03:34: 1000000 INFO @ Sun, 21 Jun 2020 19:03:35: 8000000 INFO @ Sun, 21 Jun 2020 19:03:39: 2000000 INFO @ Sun, 21 Jun 2020 19:03:40: 9000000 INFO @ Sun, 21 Jun 2020 19:03:44: 10000000 INFO @ Sun, 21 Jun 2020 19:03:45: 3000000 INFO @ Sun, 21 Jun 2020 19:03:49: 11000000 INFO @ Sun, 21 Jun 2020 19:03:50: 4000000 INFO @ Sun, 21 Jun 2020 19:03:54: 12000000 INFO @ Sun, 21 Jun 2020 19:03:56: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 19:03:58: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 19:03:58: #1 read tag files... INFO @ Sun, 21 Jun 2020 19:03:58: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 19:03:59: 13000000 INFO @ Sun, 21 Jun 2020 19:04:01: 6000000 INFO @ Sun, 21 Jun 2020 19:04:04: 1000000 INFO @ Sun, 21 Jun 2020 19:04:04: 14000000 INFO @ Sun, 21 Jun 2020 19:04:06: 7000000 INFO @ Sun, 21 Jun 2020 19:04:09: 15000000 INFO @ Sun, 21 Jun 2020 19:04:09: 2000000 INFO @ Sun, 21 Jun 2020 19:04:12: 8000000 INFO @ Sun, 21 Jun 2020 19:04:13: 16000000 INFO @ Sun, 21 Jun 2020 19:04:14: 3000000 INFO @ Sun, 21 Jun 2020 19:04:17: 9000000 INFO @ Sun, 21 Jun 2020 19:04:18: 17000000 INFO @ Sun, 21 Jun 2020 19:04:20: 4000000 INFO @ Sun, 21 Jun 2020 19:04:23: 10000000 INFO @ Sun, 21 Jun 2020 19:04:23: 18000000 INFO @ Sun, 21 Jun 2020 19:04:26: 5000000 INFO @ Sun, 21 Jun 2020 19:04:28: 19000000 INFO @ Sun, 21 Jun 2020 19:04:28: 11000000 INFO @ Sun, 21 Jun 2020 19:04:31: 6000000 INFO @ Sun, 21 Jun 2020 19:04:33: 20000000 INFO @ Sun, 21 Jun 2020 19:04:34: 12000000 INFO @ Sun, 21 Jun 2020 19:04:37: 7000000 INFO @ Sun, 21 Jun 2020 19:04:38: 21000000 INFO @ Sun, 21 Jun 2020 19:04:40: 13000000 INFO @ Sun, 21 Jun 2020 19:04:42: 8000000 INFO @ Sun, 21 Jun 2020 19:04:42: 22000000 INFO @ Sun, 21 Jun 2020 19:04:45: 14000000 INFO @ Sun, 21 Jun 2020 19:04:47: 23000000 INFO @ Sun, 21 Jun 2020 19:04:47: 9000000 INFO @ Sun, 21 Jun 2020 19:04:50: 15000000 INFO @ Sun, 21 Jun 2020 19:04:52: 24000000 INFO @ Sun, 21 Jun 2020 19:04:53: 10000000 INFO @ Sun, 21 Jun 2020 19:04:56: 16000000 INFO @ Sun, 21 Jun 2020 19:04:57: 25000000 INFO @ Sun, 21 Jun 2020 19:04:58: 11000000 INFO @ Sun, 21 Jun 2020 19:05:01: 17000000 INFO @ Sun, 21 Jun 2020 19:05:02: 26000000 INFO @ Sun, 21 Jun 2020 19:05:04: 12000000 INFO @ Sun, 21 Jun 2020 19:05:07: 27000000 INFO @ Sun, 21 Jun 2020 19:05:07: 18000000 INFO @ Sun, 21 Jun 2020 19:05:09: 13000000 INFO @ Sun, 21 Jun 2020 19:05:11: 28000000 INFO @ Sun, 21 Jun 2020 19:05:12: 19000000 INFO @ Sun, 21 Jun 2020 19:05:15: 14000000 INFO @ Sun, 21 Jun 2020 19:05:16: 29000000 INFO @ Sun, 21 Jun 2020 19:05:18: 20000000 INFO @ Sun, 21 Jun 2020 19:05:20: 15000000 INFO @ Sun, 21 Jun 2020 19:05:21: 30000000 INFO @ Sun, 21 Jun 2020 19:05:23: 21000000 INFO @ Sun, 21 Jun 2020 19:05:25: 16000000 INFO @ Sun, 21 Jun 2020 19:05:26: 31000000 INFO @ Sun, 21 Jun 2020 19:05:29: 22000000 INFO @ Sun, 21 Jun 2020 19:05:31: 32000000 INFO @ Sun, 21 Jun 2020 19:05:31: 17000000 INFO @ Sun, 21 Jun 2020 19:05:34: 23000000 INFO @ Sun, 21 Jun 2020 19:05:35: 33000000 INFO @ Sun, 21 Jun 2020 19:05:37: 18000000 INFO @ Sun, 21 Jun 2020 19:05:40: 24000000 INFO @ Sun, 21 Jun 2020 19:05:40: 34000000 INFO @ Sun, 21 Jun 2020 19:05:42: 19000000 INFO @ Sun, 21 Jun 2020 19:05:45: 35000000 INFO @ Sun, 21 Jun 2020 19:05:45: 25000000 INFO @ Sun, 21 Jun 2020 19:05:47: 20000000 INFO @ Sun, 21 Jun 2020 19:05:50: 36000000 INFO @ Sun, 21 Jun 2020 19:05:51: 26000000 INFO @ Sun, 21 Jun 2020 19:05:53: 21000000 INFO @ Sun, 21 Jun 2020 19:05:55: 37000000 INFO @ Sun, 21 Jun 2020 19:05:56: 27000000 INFO @ Sun, 21 Jun 2020 19:05:58: 22000000 INFO @ Sun, 21 Jun 2020 19:06:00: 38000000 INFO @ Sun, 21 Jun 2020 19:06:02: 28000000 INFO @ Sun, 21 Jun 2020 19:06:03: 23000000 INFO @ Sun, 21 Jun 2020 19:06:05: 39000000 INFO @ Sun, 21 Jun 2020 19:06:07: 29000000 INFO @ Sun, 21 Jun 2020 19:06:09: 24000000 INFO @ Sun, 21 Jun 2020 19:06:10: 40000000 INFO @ Sun, 21 Jun 2020 19:06:13: 30000000 INFO @ Sun, 21 Jun 2020 19:06:14: 25000000 INFO @ Sun, 21 Jun 2020 19:06:15: 41000000 INFO @ Sun, 21 Jun 2020 19:06:18: 31000000 INFO @ Sun, 21 Jun 2020 19:06:19: 42000000 INFO @ Sun, 21 Jun 2020 19:06:20: 26000000 INFO @ Sun, 21 Jun 2020 19:06:23: 32000000 INFO @ Sun, 21 Jun 2020 19:06:24: 43000000 INFO @ Sun, 21 Jun 2020 19:06:25: 27000000 INFO @ Sun, 21 Jun 2020 19:06:29: 33000000 INFO @ Sun, 21 Jun 2020 19:06:29: 44000000 INFO @ Sun, 21 Jun 2020 19:06:31: 28000000 INFO @ Sun, 21 Jun 2020 19:06:32: #1 tag size is determined as 36 bps INFO @ Sun, 21 Jun 2020 19:06:32: #1 tag size = 36 INFO @ Sun, 21 Jun 2020 19:06:32: #1 total tags in treatment: 44534595 INFO @ Sun, 21 Jun 2020 19:06:32: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 19:06:32: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 19:06:33: #1 tags after filtering in treatment: 44534595 INFO @ Sun, 21 Jun 2020 19:06:33: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 19:06:33: #1 finished! INFO @ Sun, 21 Jun 2020 19:06:33: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 19:06:33: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 19:06:34: 34000000 INFO @ Sun, 21 Jun 2020 19:06:36: #2 number of paired peaks: 118 WARNING @ Sun, 21 Jun 2020 19:06:36: Fewer paired peaks (118) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 118 pairs to build model! INFO @ Sun, 21 Jun 2020 19:06:36: start model_add_line... INFO @ Sun, 21 Jun 2020 19:06:36: start X-correlation... INFO @ Sun, 21 Jun 2020 19:06:36: end of X-cor INFO @ Sun, 21 Jun 2020 19:06:36: #2 finished! INFO @ Sun, 21 Jun 2020 19:06:36: #2 predicted fragment length is 1 bps INFO @ Sun, 21 Jun 2020 19:06:36: #2 alternative fragment length(s) may be 1,26,29 bps INFO @ Sun, 21 Jun 2020 19:06:36: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.05_model.r WARNING @ Sun, 21 Jun 2020 19:06:36: #2 Since the d (1) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 19:06:36: #2 You may need to consider one of the other alternative d(s): 1,26,29 WARNING @ Sun, 21 Jun 2020 19:06:36: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 19:06:36: #3 Call peaks... INFO @ Sun, 21 Jun 2020 19:06:36: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 19:06:36: 29000000 INFO @ Sun, 21 Jun 2020 19:06:39: 35000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sun, 21 Jun 2020 19:06:42: 30000000 INFO @ Sun, 21 Jun 2020 19:06:45: 36000000 INFO @ Sun, 21 Jun 2020 19:06:47: 31000000 INFO @ Sun, 21 Jun 2020 19:06:51: 37000000 INFO @ Sun, 21 Jun 2020 19:06:52: 32000000 INFO @ Sun, 21 Jun 2020 19:06:56: 38000000 INFO @ Sun, 21 Jun 2020 19:06:57: 33000000 INFO @ Sun, 21 Jun 2020 19:07:01: 39000000 INFO @ Sun, 21 Jun 2020 19:07:03: 34000000 INFO @ Sun, 21 Jun 2020 19:07:07: 40000000 INFO @ Sun, 21 Jun 2020 19:07:08: 35000000 INFO @ Sun, 21 Jun 2020 19:07:12: 41000000 INFO @ Sun, 21 Jun 2020 19:07:14: 36000000 INFO @ Sun, 21 Jun 2020 19:07:17: 42000000 INFO @ Sun, 21 Jun 2020 19:07:19: 37000000 INFO @ Sun, 21 Jun 2020 19:07:23: 43000000 INFO @ Sun, 21 Jun 2020 19:07:25: 38000000 INFO @ Sun, 21 Jun 2020 19:07:28: 44000000 INFO @ Sun, 21 Jun 2020 19:07:30: 39000000 INFO @ Sun, 21 Jun 2020 19:07:31: #1 tag size is determined as 36 bps INFO @ Sun, 21 Jun 2020 19:07:31: #1 tag size = 36 INFO @ Sun, 21 Jun 2020 19:07:31: #1 total tags in treatment: 44534595 INFO @ Sun, 21 Jun 2020 19:07:31: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 19:07:31: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 19:07:32: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 19:07:32: #1 tags after filtering in treatment: 44534595 INFO @ Sun, 21 Jun 2020 19:07:32: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 19:07:32: #1 finished! INFO @ Sun, 21 Jun 2020 19:07:32: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 19:07:32: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 19:07:35: #2 number of paired peaks: 118 WARNING @ Sun, 21 Jun 2020 19:07:35: Fewer paired peaks (118) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 118 pairs to build model! INFO @ Sun, 21 Jun 2020 19:07:35: start model_add_line... INFO @ Sun, 21 Jun 2020 19:07:35: start X-correlation... INFO @ Sun, 21 Jun 2020 19:07:35: end of X-cor INFO @ Sun, 21 Jun 2020 19:07:35: #2 finished! INFO @ Sun, 21 Jun 2020 19:07:35: #2 predicted fragment length is 1 bps INFO @ Sun, 21 Jun 2020 19:07:35: #2 alternative fragment length(s) may be 1,26,29 bps INFO @ Sun, 21 Jun 2020 19:07:35: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.10_model.r WARNING @ Sun, 21 Jun 2020 19:07:35: #2 Since the d (1) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 19:07:35: #2 You may need to consider one of the other alternative d(s): 1,26,29 WARNING @ Sun, 21 Jun 2020 19:07:35: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 19:07:35: #3 Call peaks... INFO @ Sun, 21 Jun 2020 19:07:35: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 19:07:35: 40000000 INFO @ Sun, 21 Jun 2020 19:07:41: 41000000 INFO @ Sun, 21 Jun 2020 19:07:46: 42000000 INFO @ Sun, 21 Jun 2020 19:07:51: 43000000 INFO @ Sun, 21 Jun 2020 19:07:56: 44000000 INFO @ Sun, 21 Jun 2020 19:07:57: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.05_peaks.xls INFO @ Sun, 21 Jun 2020 19:07:57: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.05_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 19:07:57: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.05_summits.bed INFO @ Sun, 21 Jun 2020 19:07:57: Done! BigWig に変換しました。 pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling INFO @ Sun, 21 Jun 2020 19:08:00: #1 tag size is determined as 36 bps INFO @ Sun, 21 Jun 2020 19:08:00: #1 tag size = 36 INFO @ Sun, 21 Jun 2020 19:08:00: #1 total tags in treatment: 44534595 INFO @ Sun, 21 Jun 2020 19:08:00: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 19:08:00: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 19:08:00: #1 tags after filtering in treatment: 44534595 INFO @ Sun, 21 Jun 2020 19:08:00: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 19:08:00: #1 finished! INFO @ Sun, 21 Jun 2020 19:08:00: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 19:08:00: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 19:08:03: #2 number of paired peaks: 118 WARNING @ Sun, 21 Jun 2020 19:08:03: Fewer paired peaks (118) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 118 pairs to build model! INFO @ Sun, 21 Jun 2020 19:08:03: start model_add_line... INFO @ Sun, 21 Jun 2020 19:08:03: start X-correlation... INFO @ Sun, 21 Jun 2020 19:08:03: end of X-cor INFO @ Sun, 21 Jun 2020 19:08:03: #2 finished! INFO @ Sun, 21 Jun 2020 19:08:03: #2 predicted fragment length is 1 bps INFO @ Sun, 21 Jun 2020 19:08:03: #2 alternative fragment length(s) may be 1,26,29 bps INFO @ Sun, 21 Jun 2020 19:08:03: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.20_model.r WARNING @ Sun, 21 Jun 2020 19:08:03: #2 Since the d (1) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 19:08:03: #2 You may need to consider one of the other alternative d(s): 1,26,29 WARNING @ Sun, 21 Jun 2020 19:08:03: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 19:08:03: #3 Call peaks... INFO @ Sun, 21 Jun 2020 19:08:03: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 19:08:33: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 19:08:58: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.10_peaks.xls INFO @ Sun, 21 Jun 2020 19:08:58: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.10_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 19:08:58: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.10_summits.bed INFO @ Sun, 21 Jun 2020 19:08:58: Done! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling INFO @ Sun, 21 Jun 2020 19:09:01: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 19:09:27: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.20_peaks.xls INFO @ Sun, 21 Jun 2020 19:09:27: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.20_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 19:09:27: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/SRX1342249/SRX1342249.20_summits.bed INFO @ Sun, 21 Jun 2020 19:09:27: Done! pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling