Job ID = 6451780 SRX = ERX011405 Genome = dm6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-06-21T07:17:47 prefetch.2.10.7: 1) Downloading 'ERR031126'... 2020-06-21T07:17:47 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T07:21:10 prefetch.2.10.7: HTTPS download succeed 2020-06-21T07:21:11 prefetch.2.10.7: 'ERR031126' is valid 2020-06-21T07:21:11 prefetch.2.10.7: 1) 'ERR031126' was downloaded successfully 2020-06-21T07:22:03 prefetch.2.10.7: 'ERR031126' has 10 unresolved dependencies 2020-06-21T07:22:03 prefetch.2.10.7: 2) Downloading 'ncbi-acc:AE013599.4?vdb-ctx=refseq'... 2020-06-21T07:22:03 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T07:22:21 prefetch.2.10.7: HTTPS download succeed 2020-06-21T07:22:21 prefetch.2.10.7: 2) 'ncbi-acc:AE013599.4?vdb-ctx=refseq' was downloaded successfully 2020-06-21T07:22:21 prefetch.2.10.7: 3) Downloading 'ncbi-acc:AE014134.5?vdb-ctx=refseq'... 2020-06-21T07:22:21 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T07:22:38 prefetch.2.10.7: HTTPS download succeed 2020-06-21T07:22:38 prefetch.2.10.7: 3) 'ncbi-acc:AE014134.5?vdb-ctx=refseq' was downloaded successfully 2020-06-21T07:22:38 prefetch.2.10.7: 4) Downloading 'ncbi-acc:AE014135.3?vdb-ctx=refseq'... 2020-06-21T07:22:38 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T07:22:51 prefetch.2.10.7: HTTPS download succeed 2020-06-21T07:22:51 prefetch.2.10.7: 4) 'ncbi-acc:AE014135.3?vdb-ctx=refseq' was downloaded successfully 2020-06-21T07:22:51 prefetch.2.10.7: 5) Downloading 'ncbi-acc:AE014296.4?vdb-ctx=refseq'... 2020-06-21T07:22:51 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T07:23:09 prefetch.2.10.7: HTTPS download succeed 2020-06-21T07:23:09 prefetch.2.10.7: 5) 'ncbi-acc:AE014296.4?vdb-ctx=refseq' was downloaded successfully 2020-06-21T07:23:09 prefetch.2.10.7: 6) Downloading 'ncbi-acc:AE014297.2?vdb-ctx=refseq'... 2020-06-21T07:23:09 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T07:23:29 prefetch.2.10.7: HTTPS download succeed 2020-06-21T07:23:29 prefetch.2.10.7: 6) 'ncbi-acc:AE014297.2?vdb-ctx=refseq' was downloaded successfully 2020-06-21T07:23:29 prefetch.2.10.7: 7) Downloading 'ncbi-acc:AE014298.4?vdb-ctx=refseq'... 2020-06-21T07:23:29 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T07:24:00 prefetch.2.10.7: HTTPS download succeed 2020-06-21T07:24:00 prefetch.2.10.7: 7) 'ncbi-acc:AE014298.4?vdb-ctx=refseq' was downloaded successfully 2020-06-21T07:24:00 prefetch.2.10.7: 8) Downloading 'ncbi-acc:CM000457.1?vdb-ctx=refseq'... 2020-06-21T07:24:00 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T07:24:14 prefetch.2.10.7: HTTPS download succeed 2020-06-21T07:24:14 prefetch.2.10.7: 8) 'ncbi-acc:CM000457.1?vdb-ctx=refseq' was downloaded successfully 2020-06-21T07:24:14 prefetch.2.10.7: 9) Downloading 'ncbi-acc:CM000458.1?vdb-ctx=refseq'... 2020-06-21T07:24:14 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T07:24:26 prefetch.2.10.7: HTTPS download succeed 2020-06-21T07:24:26 prefetch.2.10.7: 9) 'ncbi-acc:CM000458.1?vdb-ctx=refseq' was downloaded successfully 2020-06-21T07:24:26 prefetch.2.10.7: 10) Downloading 'ncbi-acc:CM000459.1?vdb-ctx=refseq'... 2020-06-21T07:24:26 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T07:24:39 prefetch.2.10.7: HTTPS download succeed 2020-06-21T07:24:39 prefetch.2.10.7: 10) 'ncbi-acc:CM000459.1?vdb-ctx=refseq' was downloaded successfully 2020-06-21T07:24:39 prefetch.2.10.7: 11) Downloading 'ncbi-acc:FA000001.1?vdb-ctx=refseq'... 2020-06-21T07:24:39 prefetch.2.10.7: Downloading via HTTPS... 2020-06-21T07:24:54 prefetch.2.10.7: HTTPS download succeed 2020-06-21T07:24:54 prefetch.2.10.7: 11) 'ncbi-acc:FA000001.1?vdb-ctx=refseq' was downloaded successfully Read 28132732 spots for ERR031126/ERR031126.sra Written 28132732 spots for ERR031126/ERR031126.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:05:54 28132732 reads; of these: 28132732 (100.00%) were unpaired; of these: 901963 (3.21%) aligned 0 times 19904803 (70.75%) aligned exactly 1 time 7325966 (26.04%) aligned >1 times 96.79% overall alignment rate Time searching: 00:05:54 Overall time: 00:05:54 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 1870 sequences. [bam_sort_core] merging from 8 files... [bam_rmdupse_core] 7157729 / 27230769 = 0.2629 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 16:37:32: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 16:37:32: #1 read tag files... INFO @ Sun, 21 Jun 2020 16:37:32: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 16:37:36: 1000000 INFO @ Sun, 21 Jun 2020 16:37:41: 2000000 INFO @ Sun, 21 Jun 2020 16:37:46: 3000000 INFO @ Sun, 21 Jun 2020 16:37:51: 4000000 INFO @ Sun, 21 Jun 2020 16:37:56: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 16:38:01: 6000000 INFO @ Sun, 21 Jun 2020 16:38:02: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 16:38:02: #1 read tag files... INFO @ Sun, 21 Jun 2020 16:38:02: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 16:38:06: 7000000 INFO @ Sun, 21 Jun 2020 16:38:07: 1000000 INFO @ Sun, 21 Jun 2020 16:38:12: 8000000 INFO @ Sun, 21 Jun 2020 16:38:12: 2000000 INFO @ Sun, 21 Jun 2020 16:38:17: 9000000 INFO @ Sun, 21 Jun 2020 16:38:18: 3000000 INFO @ Sun, 21 Jun 2020 16:38:22: 10000000 INFO @ Sun, 21 Jun 2020 16:38:23: 4000000 INFO @ Sun, 21 Jun 2020 16:38:27: 11000000 INFO @ Sun, 21 Jun 2020 16:38:28: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sun, 21 Jun 2020 16:38:32: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 21 Jun 2020 16:38:32: #1 read tag files... INFO @ Sun, 21 Jun 2020 16:38:32: #1 read treatment tags... INFO @ Sun, 21 Jun 2020 16:38:32: 12000000 INFO @ Sun, 21 Jun 2020 16:38:34: 6000000 INFO @ Sun, 21 Jun 2020 16:38:37: 1000000 INFO @ Sun, 21 Jun 2020 16:38:38: 13000000 INFO @ Sun, 21 Jun 2020 16:38:39: 7000000 INFO @ Sun, 21 Jun 2020 16:38:42: 2000000 INFO @ Sun, 21 Jun 2020 16:38:43: 14000000 INFO @ Sun, 21 Jun 2020 16:38:44: 8000000 INFO @ Sun, 21 Jun 2020 16:38:48: 3000000 INFO @ Sun, 21 Jun 2020 16:38:48: 15000000 INFO @ Sun, 21 Jun 2020 16:38:50: 9000000 INFO @ Sun, 21 Jun 2020 16:38:53: 4000000 INFO @ Sun, 21 Jun 2020 16:38:54: 16000000 INFO @ Sun, 21 Jun 2020 16:38:55: 10000000 INFO @ Sun, 21 Jun 2020 16:38:59: 5000000 INFO @ Sun, 21 Jun 2020 16:39:00: 17000000 INFO @ Sun, 21 Jun 2020 16:39:01: 11000000 INFO @ Sun, 21 Jun 2020 16:39:04: 6000000 INFO @ Sun, 21 Jun 2020 16:39:05: 18000000 INFO @ Sun, 21 Jun 2020 16:39:06: 12000000 INFO @ Sun, 21 Jun 2020 16:39:09: 7000000 INFO @ Sun, 21 Jun 2020 16:39:10: 19000000 INFO @ Sun, 21 Jun 2020 16:39:11: 13000000 INFO @ Sun, 21 Jun 2020 16:39:14: 8000000 INFO @ Sun, 21 Jun 2020 16:39:15: 20000000 INFO @ Sun, 21 Jun 2020 16:39:16: #1 tag size is determined as 36 bps INFO @ Sun, 21 Jun 2020 16:39:16: #1 tag size = 36 INFO @ Sun, 21 Jun 2020 16:39:16: #1 total tags in treatment: 20073040 INFO @ Sun, 21 Jun 2020 16:39:16: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 16:39:16: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 16:39:16: 14000000 INFO @ Sun, 21 Jun 2020 16:39:17: #1 tags after filtering in treatment: 20073039 INFO @ Sun, 21 Jun 2020 16:39:17: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 16:39:17: #1 finished! INFO @ Sun, 21 Jun 2020 16:39:17: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 16:39:17: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 16:39:18: #2 number of paired peaks: 578 WARNING @ Sun, 21 Jun 2020 16:39:18: Fewer paired peaks (578) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 578 pairs to build model! INFO @ Sun, 21 Jun 2020 16:39:18: start model_add_line... INFO @ Sun, 21 Jun 2020 16:39:18: start X-correlation... INFO @ Sun, 21 Jun 2020 16:39:18: end of X-cor INFO @ Sun, 21 Jun 2020 16:39:18: #2 finished! INFO @ Sun, 21 Jun 2020 16:39:18: #2 predicted fragment length is 1 bps INFO @ Sun, 21 Jun 2020 16:39:18: #2 alternative fragment length(s) may be 1 bps INFO @ Sun, 21 Jun 2020 16:39:18: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.05_model.r WARNING @ Sun, 21 Jun 2020 16:39:18: #2 Since the d (1) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 16:39:18: #2 You may need to consider one of the other alternative d(s): 1 WARNING @ Sun, 21 Jun 2020 16:39:18: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 16:39:18: #3 Call peaks... INFO @ Sun, 21 Jun 2020 16:39:18: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 16:39:20: 9000000 INFO @ Sun, 21 Jun 2020 16:39:22: 15000000 INFO @ Sun, 21 Jun 2020 16:39:25: 10000000 INFO @ Sun, 21 Jun 2020 16:39:27: 16000000 INFO @ Sun, 21 Jun 2020 16:39:30: 11000000 INFO @ Sun, 21 Jun 2020 16:39:33: 17000000 INFO @ Sun, 21 Jun 2020 16:39:35: 12000000 INFO @ Sun, 21 Jun 2020 16:39:38: 18000000 INFO @ Sun, 21 Jun 2020 16:39:41: 13000000 INFO @ Sun, 21 Jun 2020 16:39:43: 19000000 INFO @ Sun, 21 Jun 2020 16:39:46: 14000000 INFO @ Sun, 21 Jun 2020 16:39:48: 20000000 INFO @ Sun, 21 Jun 2020 16:39:49: #1 tag size is determined as 36 bps INFO @ Sun, 21 Jun 2020 16:39:49: #1 tag size = 36 INFO @ Sun, 21 Jun 2020 16:39:49: #1 total tags in treatment: 20073040 INFO @ Sun, 21 Jun 2020 16:39:49: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 16:39:49: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 16:39:50: #1 tags after filtering in treatment: 20073039 INFO @ Sun, 21 Jun 2020 16:39:50: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 16:39:50: #1 finished! INFO @ Sun, 21 Jun 2020 16:39:50: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 16:39:50: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 16:39:51: 15000000 INFO @ Sun, 21 Jun 2020 16:39:51: #2 number of paired peaks: 578 WARNING @ Sun, 21 Jun 2020 16:39:51: Fewer paired peaks (578) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 578 pairs to build model! INFO @ Sun, 21 Jun 2020 16:39:51: start model_add_line... INFO @ Sun, 21 Jun 2020 16:39:51: start X-correlation... INFO @ Sun, 21 Jun 2020 16:39:51: end of X-cor INFO @ Sun, 21 Jun 2020 16:39:51: #2 finished! INFO @ Sun, 21 Jun 2020 16:39:51: #2 predicted fragment length is 1 bps INFO @ Sun, 21 Jun 2020 16:39:51: #2 alternative fragment length(s) may be 1 bps INFO @ Sun, 21 Jun 2020 16:39:51: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.10_model.r WARNING @ Sun, 21 Jun 2020 16:39:51: #2 Since the d (1) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 16:39:51: #2 You may need to consider one of the other alternative d(s): 1 WARNING @ Sun, 21 Jun 2020 16:39:51: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 16:39:51: #3 Call peaks... INFO @ Sun, 21 Jun 2020 16:39:51: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 16:39:54: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 16:39:56: 16000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sun, 21 Jun 2020 16:40:01: 17000000 INFO @ Sun, 21 Jun 2020 16:40:06: 18000000 INFO @ Sun, 21 Jun 2020 16:40:11: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.05_peaks.xls INFO @ Sun, 21 Jun 2020 16:40:11: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.05_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 16:40:11: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.05_summits.bed INFO @ Sun, 21 Jun 2020 16:40:11: Done! INFO @ Sun, 21 Jun 2020 16:40:11: 19000000 pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling INFO @ Sun, 21 Jun 2020 16:40:16: 20000000 INFO @ Sun, 21 Jun 2020 16:40:16: #1 tag size is determined as 36 bps INFO @ Sun, 21 Jun 2020 16:40:16: #1 tag size = 36 INFO @ Sun, 21 Jun 2020 16:40:16: #1 total tags in treatment: 20073040 INFO @ Sun, 21 Jun 2020 16:40:16: #1 user defined the maximum tags... INFO @ Sun, 21 Jun 2020 16:40:16: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 21 Jun 2020 16:40:17: #1 tags after filtering in treatment: 20073039 INFO @ Sun, 21 Jun 2020 16:40:17: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 21 Jun 2020 16:40:17: #1 finished! INFO @ Sun, 21 Jun 2020 16:40:17: #2 Build Peak Model... INFO @ Sun, 21 Jun 2020 16:40:17: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 21 Jun 2020 16:40:18: #2 number of paired peaks: 578 WARNING @ Sun, 21 Jun 2020 16:40:18: Fewer paired peaks (578) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 578 pairs to build model! INFO @ Sun, 21 Jun 2020 16:40:18: start model_add_line... INFO @ Sun, 21 Jun 2020 16:40:18: start X-correlation... INFO @ Sun, 21 Jun 2020 16:40:18: end of X-cor INFO @ Sun, 21 Jun 2020 16:40:18: #2 finished! INFO @ Sun, 21 Jun 2020 16:40:18: #2 predicted fragment length is 1 bps INFO @ Sun, 21 Jun 2020 16:40:18: #2 alternative fragment length(s) may be 1 bps INFO @ Sun, 21 Jun 2020 16:40:18: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.20_model.r WARNING @ Sun, 21 Jun 2020 16:40:18: #2 Since the d (1) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sun, 21 Jun 2020 16:40:18: #2 You may need to consider one of the other alternative d(s): 1 WARNING @ Sun, 21 Jun 2020 16:40:18: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sun, 21 Jun 2020 16:40:18: #3 Call peaks... INFO @ Sun, 21 Jun 2020 16:40:18: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 21 Jun 2020 16:40:27: #3 Call peaks for each chromosome... BigWig に変換しました。 INFO @ Sun, 21 Jun 2020 16:40:43: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.10_peaks.xls INFO @ Sun, 21 Jun 2020 16:40:43: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.10_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 16:40:43: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.10_summits.bed INFO @ Sun, 21 Jun 2020 16:40:43: Done! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling INFO @ Sun, 21 Jun 2020 16:40:55: #3 Call peaks for each chromosome... INFO @ Sun, 21 Jun 2020 16:41:11: #4 Write output xls file... /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.20_peaks.xls INFO @ Sun, 21 Jun 2020 16:41:11: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.20_peaks.narrowPeak INFO @ Sun, 21 Jun 2020 16:41:11: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm6/ERX011405/ERX011405.20_summits.bed INFO @ Sun, 21 Jun 2020 16:41:11: Done! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) CompletedMACS2peakCalling