ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX191914 | S2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◣ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Usf
CG3546
CG3527
CG15912
CG11444
CG11436
Rbfox1
CadN
dnc
siz
Imp
sbr
CG15210
CG15209
CG8119
CG8117
Eh
CG14331
CG14330
Hk
CG14417
CG14416
Spn28Db
Spn28Da
SmE
CG7102
CG34132
cmpy
CG34260
shot
DJ-1alpha
prage
Adar
RagA-B
CG11970
CAHbeta
cm
CG4593
CG42308
CG32736
CG3032
ham
eya
Socs16D
CG12986
nej
btd
Dys
CG15025
GNBP2
GNBP1
CG42495
Capr
CG42346
raskol
sick
CG10481
Asator
PCB
Ntmt
Lime
CG46338
CG30010
CG12744
Gycbeta100B
CG15556
CG15554
Abd-B
Tak1
CG42579
abd-A
Usp47
DnaJ-1
CG8945
CG4955
wcy
CG4949
CG43077
Lmpt
CG32170
SIFaR
Vsx2
CHES-1-like
CG15478
NtR
gom
GM130
CG34205
CG11269
a
CG6118
Act88F
Rim
cpo
CG43445
CG13465
BobA
CG42700
Cam
CARPB
CG1354
Wnt4
scb
Fs
MBD-R2
CG44956
CG4115
CG10041
CG10038
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
CG5890
CG5886
CG14545
TwdlE
lectin-28C
CG14535
CG31275
Sfp84E
Os-C
CD98hc
vir-1
SC35
eRF3
CG6405
CG6388
CG5446
CG5435
beat-IIIc
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
Tlk
Rala
SNF4Agamma
Ptpmeg2
CG3106
obst-E
CG9171
Ubr1
viaf
Pop2
Grip163
CG6928
CSN3
CG3288
CG13255
CG11456
flr
CG10222
sens
TfAP-2
zen
bcd
Ama
hwt
CG12007
PIG-K
east
Tsp68C
Hml
CG8757
CG8750
CG43184
scrib
plum
mdy
Cse1
CG13280
CG13272
CG4991
CG16700
Cpr100A
CG15546
CG15545
Usp30
mof
CG16721
Gr89a
Decay
CG42342
Cad89D
CG15429
Atet
CG9777
SNRPG
RpS19a
Rok
mthl1
dnt
CG17349
CG13086
Vm32E
CG4788
Ca-beta
N
kirre
Svil
CG16762
Wdr62
RapGAP1
Nc73EF
Cpr73D
ome
CG4914
CG43121
tzn
Spc105R
Six4
CG3698
TwdlZ
Twdlalpha
goe
CG32568
CG8180
Mp
RpL37a
Indy
Syn2
LSm7
glu
ChLD3
BuGZ
Or67d
can
CG3868
CG14270
CG12206
CG10804
CG10803
CG10802
mRpS33
ema
CG31279
CG17565
CG14881
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
lace
CG3638
CG11403
wdp
Gp150
Men
Neu2
CG7519
CG7202
croc
sNPF-R
CG14186
CG14185
Esyt2
Prm
Fhos
CG6576
CG13306
Sox21a
tx
CG6503
CG34291
RpS2
mtDNA-helicase
Bka
Scp2
CG14903
CG14891
nAChRalpha6
Fkbp59
CG4537
CG34183
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
CG15919
CG15615
Tpst
CG46311
CG32633
CG32631
CG11816
Gr59d
RpL37b
Gr59c
CG42703
CG9876
CG13538
CG5819
Rubicon
CAH3
Trissin
obe
CG5213
Shmt
CG4020
CG3726
CG12236
Act5C
fz3
tw
CG16989
CG13360
Rlip
CG5697
CG17278
CG6163
sr
CG43980
CG31324
CG6142
stc
CG15269
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
zip
uzip
OXA1L
galla-2
CG6418
CG6409
Blos4
mdlc
CG4390
CG17193
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
trio
CG9205
CG9497
ppk7
ppk14
CG9500
CG9498
CG13151
achi
fra
CG8818
CG8569
CG33632
tow
CG14820
CG4161
TM9SF3
mthl2
Eaf6
CG10591
Spn
CG32295
ftz-f1
CG43693
CG7888
Prp31
Msh6
CG7011
CG6878
Fancm
nol
NaPi-III
CG32074
Ufd1-like
Sod1
mRpL2
FoxK
nerfin-2
CG33784
Alp13
CG33783
RpIIIC53
mus304
mRpS26
CG7341
CG42853
CG32195
CG13698
stl
CycB
CG42260
CG30271
blw
GstT2
GstT1
CG30339
CG1902
CG12926
Rpn12R
ind
EAChm
CG43680
CG43679
CG43678
CG18649
CG18581
CG13461
CG12310
SPE
GILT3
GILT2
eIF3d1
CG18754
CG16710
mthl14
E(bx)
wts
dj-1beta
cindr
betaTub60D
Odc2
Odc1
CG14762
Ldh
CG10163
Best2
nau
CG10365
CG10232
RpS15Aa
Jafrac1
IP3K2
CG15747
Ndae1
CG31909
CG13786
Gsc
CG13689
Gbs-76A
fal
flz
SecS
Rga
kra
Atu
asl
Idh3a
CoRest
CG12231
VhaM9.7-d
Actn3
Act57B
dar1
CG14974
CG10359
CG10357
shep
spel1
Send2
Rab14
Pgant35A
mTTF
l(2)34Fd
l(2)34Fc
CG43052
Hers
amn
CG42327
CG14715
CG33226
CG30287
CG30286
CG30283
CG13962
Mipp1
CG43206
CG4229
CG43760
CG18109
CG31826
RpS21
CG3117
CG3104
CG2991
CG2983
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
CG13192
Vha13
subdued
Nup58
CG6195
CG6184
CG31220
CG31219
wgn
Sr-CII
RpS11
CG8858
CG12730
CG5906
Sprn
CCDC151
CG33927
LanB2
CG3335
Tsp
Nse1
Nhe3
cort
CG11327
AP-2alpha
RpLP1
ebi
CG13692
CG13690
CG11885
BBS8
ex
zda
CheA56a
CG30122
CG1077
Osi1
scyl
PGRP-LC
PGRP-LA
Calx
CG43446
Cyp12e1
CG46270
larp
Or98b
Moca-cyp
Gfat2
Pde1c
lz
c11.1
Npc2b
CG9920
CCHa1
RpS26
ncm
PK1-R
CG12402
Oseg2
CG9018
ACXD
CG32301
fl(2)d
CG6347
CG6337
CG6329
CG13339
pav
ImpL2
CG14997
CycY
crol
Mtpalpha
jp
brwl
Nrt
CG13025
CG9705
CG46468
tna
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
for
Drgx
CG3355
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
Lasp
Dab
CG9692
CG43954
TotX
hdly
Grik
Myd88
CG32117
CG12520
CG14118
HnRNP-K
CG42749
mud
mRNA-cap
Fbxl4
CG32599
CG1434
PDZ-GEF
Pax
Lectin-galC1
lectin-37Db
lectin-37Da
CG13085
Alp12
Ptp61F
CG2199
312
pzg
ppl
Cpr78Cb
Cpr78Ca
CG12974
AcCoAS
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
Spx
Rbcn-3A
CG3781
snu
Sid
CG33346
CG13229
Cyp12d1-d
BBS4
Rpn13
PheRS-m
Cp1
CG42806
St4
CG18568
sm
CG43277
CG42753
CG18367
CG15124
RpLP2
CG8311
CG8306
CG8303
CG5089
Egm
CG9005
Cht6
CG33557
CG2990
Ttd14
slim
rswl
Prp19
CG5189
CG30120
CG17669
Sox100B
dco
Chchd3
vig
vas
TfIIS
solo
ck
CG33679
Or67c
CG44004
CG34253
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
insv
Elba2
ND-B17.2
Drp1
CG15394
Arpc5
CG10139
Adgf-E
Pex7
CG13305
Arr2
Trxr-1
sni
ND-75
CG1632
soti
mRpS18B
Kua
CG13970
CG7509
CG18808
bun
Toll-7
CG43332
ZnT77C
ND-39
CG5078
CG32425
CG18281
CG17637
CG43055
chif
CG4455
CG44405
CG42266
CG42231
CaBP1
GCS2alpha
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
tkv
Bub1
Bsg25D
Cyp4ac3
sky
RPA2
Mtp
CG9272
CG43739
Gmap
CG6340
InR
ppk9
Gr58c
Gr58b
CG9304
CG34029
Gr58a
GlyP
CG4259
Usp10
CG13907
Paip2
CG7381
CG7091
CG31342
CG14383
caps
DCX-EMAP
CG5897
CG3358
Oatp30B
Cpr30B
CG17855
CG13114
CG13113
Pde8
retn
nxf4
CG43290
CG31496
Pez
Cpr
velo
dikar
Ist1
CG8549
Rsph3
RhoGEF64C
CG7514
CG18418
CG15876
CG13713
axo
Aps
par-1
TTLL4A
SCAR
piwi
CG12253
ATPsynG
Ir11a
CG34165
CG15282
slbo
bs
SPARC
Rb97D
ms(3)K81
CG5500
Lerp
IntS12
His2Av
ball
Eglp4
Eglp2
Eglp3
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
apt
rnh1
PIG-X
drosha
CG8728
CG34431
CG34430
CG30380
CG30379
CG30378
azot
Rab3-GEF
Lsd-2
CG9065
CG5599
CG33178
CG33177
CG15027
CG14947
prd
Pex19
qvr
E(Pc)
Smyd5
Oga
Nelf-A
CG5862
CG3337
Vps25
Gle1
CG8635
beta3GalTII
Cirl
CG8642
SP1173
RtcB
Rab9
Sox102F
fd102C
Gug
CG6983
Unr
CG13481
Mef2
HisRS
Ggt-1
CG6481
CG6470
Bx
Panx
CG9485
CG33655
CG43229
CG43133
ari-1
Cpsf6
CG43059
CG34462
CG34461
CG13670
CG30394
CG43919
CG30076
sit
CG33110
ssp6
CG6610
CG13295
CG13293
Timp
Dscam1
Lk
CG34039
CG42758
Snp
CG44249
CG13501
CG13500
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
Reck
HIP-R
Sytalpha
Oli
CG6870
Zpr1
Ost48
His3.3B
fh
Dlip1
CG9034
CG7065
CG44532
Bap111
DNaseII
CG7794
CG7785
Cpr76Bc
Cpr76Bb
Cpr76Ba
pHCl-1
Jupiter
CG6808
CG14711
CG14710
Srpk79D
Rich
Ddx1
Csp
CG11523
rpr
Sirt6
pont
Nuak1
CG31663
CG15358
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
RpI135
CG4213
sno
REG
CG44437
EbpII
Ebp
CG9380
CG2016
CG1124
waw
Sep1
bbx
sigmar
Sesn
l(2)dtl
CG5504
CG46429
CG18128
Alg3
Tsp97E
Spag1
Gr97a
CG6330
Eip74EF