Job ID = 14168953 SRX = SRX9910785 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 43969204 spots for SRR13498856/SRR13498856.sra Written 43969204 spots for SRR13498856/SRR13498856.sra fastq に変換しました。 bowtie でマッピング中... Your job 14170302 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:41:09 43969204 reads; of these: 43969204 (100.00%) were paired; of these: 16611444 (37.78%) aligned concordantly 0 times 20138501 (45.80%) aligned concordantly exactly 1 time 7219259 (16.42%) aligned concordantly >1 times ---- 16611444 pairs aligned concordantly 0 times; of these: 2679630 (16.13%) aligned discordantly 1 time ---- 13931814 pairs aligned 0 times concordantly or discordantly; of these: 27863628 mates make up the pairs; of these: 23407873 (84.01%) aligned 0 times 697154 (2.50%) aligned exactly 1 time 3758601 (13.49%) aligned >1 times 73.38% overall alignment rate Time searching: 01:41:09 Overall time: 01:41:09 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 48 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 10367402 / 29885088 = 0.3469 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 00:25:48: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 00:25:48: #1 read tag files... INFO @ Sat, 11 Dec 2021 00:25:48: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 00:25:54: 1000000 INFO @ Sat, 11 Dec 2021 00:26:01: 2000000 INFO @ Sat, 11 Dec 2021 00:26:08: 3000000 INFO @ Sat, 11 Dec 2021 00:26:14: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 00:26:17: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 00:26:17: #1 read tag files... INFO @ Sat, 11 Dec 2021 00:26:17: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 00:26:21: 5000000 INFO @ Sat, 11 Dec 2021 00:26:25: 1000000 INFO @ Sat, 11 Dec 2021 00:26:29: 6000000 INFO @ Sat, 11 Dec 2021 00:26:33: 2000000 INFO @ Sat, 11 Dec 2021 00:26:36: 7000000 INFO @ Sat, 11 Dec 2021 00:26:40: 3000000 INFO @ Sat, 11 Dec 2021 00:26:44: 8000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 00:26:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 00:26:47: #1 read tag files... INFO @ Sat, 11 Dec 2021 00:26:47: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 00:26:48: 4000000 INFO @ Sat, 11 Dec 2021 00:26:51: 9000000 INFO @ Sat, 11 Dec 2021 00:26:56: 1000000 INFO @ Sat, 11 Dec 2021 00:26:56: 5000000 INFO @ Sat, 11 Dec 2021 00:26:59: 10000000 INFO @ Sat, 11 Dec 2021 00:27:04: 2000000 INFO @ Sat, 11 Dec 2021 00:27:04: 6000000 INFO @ Sat, 11 Dec 2021 00:27:06: 11000000 INFO @ Sat, 11 Dec 2021 00:27:12: 3000000 INFO @ Sat, 11 Dec 2021 00:27:13: 7000000 INFO @ Sat, 11 Dec 2021 00:27:14: 12000000 INFO @ Sat, 11 Dec 2021 00:27:20: 4000000 INFO @ Sat, 11 Dec 2021 00:27:20: 8000000 INFO @ Sat, 11 Dec 2021 00:27:21: 13000000 INFO @ Sat, 11 Dec 2021 00:27:28: 5000000 INFO @ Sat, 11 Dec 2021 00:27:29: 14000000 INFO @ Sat, 11 Dec 2021 00:27:29: 9000000 INFO @ Sat, 11 Dec 2021 00:27:36: 15000000 INFO @ Sat, 11 Dec 2021 00:27:36: 6000000 INFO @ Sat, 11 Dec 2021 00:27:37: 10000000 INFO @ Sat, 11 Dec 2021 00:27:43: 16000000 INFO @ Sat, 11 Dec 2021 00:27:44: 7000000 INFO @ Sat, 11 Dec 2021 00:27:45: 11000000 INFO @ Sat, 11 Dec 2021 00:27:51: 17000000 INFO @ Sat, 11 Dec 2021 00:27:52: 8000000 INFO @ Sat, 11 Dec 2021 00:27:53: 12000000 INFO @ Sat, 11 Dec 2021 00:27:58: 18000000 INFO @ Sat, 11 Dec 2021 00:28:00: 9000000 INFO @ Sat, 11 Dec 2021 00:28:00: 13000000 INFO @ Sat, 11 Dec 2021 00:28:05: 19000000 INFO @ Sat, 11 Dec 2021 00:28:08: 10000000 INFO @ Sat, 11 Dec 2021 00:28:08: 14000000 INFO @ Sat, 11 Dec 2021 00:28:13: 20000000 INFO @ Sat, 11 Dec 2021 00:28:16: 11000000 INFO @ Sat, 11 Dec 2021 00:28:16: 15000000 INFO @ Sat, 11 Dec 2021 00:28:20: 21000000 INFO @ Sat, 11 Dec 2021 00:28:24: 16000000 INFO @ Sat, 11 Dec 2021 00:28:24: 12000000 INFO @ Sat, 11 Dec 2021 00:28:28: 22000000 INFO @ Sat, 11 Dec 2021 00:28:32: 17000000 INFO @ Sat, 11 Dec 2021 00:28:32: 13000000 INFO @ Sat, 11 Dec 2021 00:28:35: 23000000 INFO @ Sat, 11 Dec 2021 00:28:40: 18000000 INFO @ Sat, 11 Dec 2021 00:28:41: 14000000 INFO @ Sat, 11 Dec 2021 00:28:43: 24000000 INFO @ Sat, 11 Dec 2021 00:28:48: 19000000 INFO @ Sat, 11 Dec 2021 00:28:49: 15000000 INFO @ Sat, 11 Dec 2021 00:28:51: 25000000 INFO @ Sat, 11 Dec 2021 00:28:56: 20000000 INFO @ Sat, 11 Dec 2021 00:28:57: 16000000 INFO @ Sat, 11 Dec 2021 00:28:58: 26000000 INFO @ Sat, 11 Dec 2021 00:29:03: 21000000 INFO @ Sat, 11 Dec 2021 00:29:05: 17000000 INFO @ Sat, 11 Dec 2021 00:29:06: 27000000 INFO @ Sat, 11 Dec 2021 00:29:11: 22000000 INFO @ Sat, 11 Dec 2021 00:29:13: 18000000 INFO @ Sat, 11 Dec 2021 00:29:13: 28000000 INFO @ Sat, 11 Dec 2021 00:29:19: 23000000 INFO @ Sat, 11 Dec 2021 00:29:20: 29000000 INFO @ Sat, 11 Dec 2021 00:29:21: 19000000 INFO @ Sat, 11 Dec 2021 00:29:27: 24000000 INFO @ Sat, 11 Dec 2021 00:29:28: 30000000 INFO @ Sat, 11 Dec 2021 00:29:29: 20000000 INFO @ Sat, 11 Dec 2021 00:29:35: 31000000 INFO @ Sat, 11 Dec 2021 00:29:35: 25000000 INFO @ Sat, 11 Dec 2021 00:29:36: 21000000 INFO @ Sat, 11 Dec 2021 00:29:42: 32000000 INFO @ Sat, 11 Dec 2021 00:29:43: 26000000 INFO @ Sat, 11 Dec 2021 00:29:44: 22000000 INFO @ Sat, 11 Dec 2021 00:29:49: 33000000 INFO @ Sat, 11 Dec 2021 00:29:50: 27000000 INFO @ Sat, 11 Dec 2021 00:29:52: 23000000 INFO @ Sat, 11 Dec 2021 00:29:56: 34000000 INFO @ Sat, 11 Dec 2021 00:29:58: 28000000 INFO @ Sat, 11 Dec 2021 00:30:00: 24000000 INFO @ Sat, 11 Dec 2021 00:30:04: 35000000 INFO @ Sat, 11 Dec 2021 00:30:06: 29000000 INFO @ Sat, 11 Dec 2021 00:30:08: 25000000 INFO @ Sat, 11 Dec 2021 00:30:11: 36000000 INFO @ Sat, 11 Dec 2021 00:30:13: 30000000 INFO @ Sat, 11 Dec 2021 00:30:16: 26000000 INFO @ Sat, 11 Dec 2021 00:30:19: 37000000 INFO @ Sat, 11 Dec 2021 00:30:21: 31000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 11 Dec 2021 00:30:24: 27000000 INFO @ Sat, 11 Dec 2021 00:30:26: 38000000 INFO @ Sat, 11 Dec 2021 00:30:29: 32000000 INFO @ Sat, 11 Dec 2021 00:30:31: 28000000 INFO @ Sat, 11 Dec 2021 00:30:34: 39000000 INFO @ Sat, 11 Dec 2021 00:30:36: 33000000 INFO @ Sat, 11 Dec 2021 00:30:39: 29000000 INFO @ Sat, 11 Dec 2021 00:30:41: 40000000 INFO @ Sat, 11 Dec 2021 00:30:44: 34000000 INFO @ Sat, 11 Dec 2021 00:30:47: 30000000 INFO @ Sat, 11 Dec 2021 00:30:49: 41000000 INFO @ Sat, 11 Dec 2021 00:30:52: 35000000 INFO @ Sat, 11 Dec 2021 00:30:55: 31000000 INFO @ Sat, 11 Dec 2021 00:30:56: 42000000 INFO @ Sat, 11 Dec 2021 00:31:00: 36000000 INFO @ Sat, 11 Dec 2021 00:31:02: 32000000 INFO @ Sat, 11 Dec 2021 00:31:03: 43000000 INFO @ Sat, 11 Dec 2021 00:31:07: 37000000 INFO @ Sat, 11 Dec 2021 00:31:09: #1 tag size is determined as 151 bps INFO @ Sat, 11 Dec 2021 00:31:09: #1 tag size = 151 INFO @ Sat, 11 Dec 2021 00:31:09: #1 total tags in treatment: 17722808 INFO @ Sat, 11 Dec 2021 00:31:09: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 00:31:09: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 00:31:10: #1 tags after filtering in treatment: 13951722 INFO @ Sat, 11 Dec 2021 00:31:10: #1 Redundant rate of treatment: 0.21 INFO @ Sat, 11 Dec 2021 00:31:10: #1 finished! INFO @ Sat, 11 Dec 2021 00:31:10: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 00:31:10: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 00:31:10: 33000000 INFO @ Sat, 11 Dec 2021 00:31:11: #2 number of paired peaks: 105 WARNING @ Sat, 11 Dec 2021 00:31:11: Fewer paired peaks (105) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 105 pairs to build model! INFO @ Sat, 11 Dec 2021 00:31:11: start model_add_line... INFO @ Sat, 11 Dec 2021 00:31:11: start X-correlation... INFO @ Sat, 11 Dec 2021 00:31:11: end of X-cor INFO @ Sat, 11 Dec 2021 00:31:11: #2 finished! INFO @ Sat, 11 Dec 2021 00:31:11: #2 predicted fragment length is 166 bps INFO @ Sat, 11 Dec 2021 00:31:11: #2 alternative fragment length(s) may be 4,166 bps INFO @ Sat, 11 Dec 2021 00:31:11: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.05_model.r WARNING @ Sat, 11 Dec 2021 00:31:11: #2 Since the d (166) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 00:31:11: #2 You may need to consider one of the other alternative d(s): 4,166 WARNING @ Sat, 11 Dec 2021 00:31:11: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 00:31:11: #3 Call peaks... INFO @ Sat, 11 Dec 2021 00:31:11: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 00:31:15: 38000000 INFO @ Sat, 11 Dec 2021 00:31:18: 34000000 INFO @ Sat, 11 Dec 2021 00:31:22: 39000000 BigWig に変換しました。 INFO @ Sat, 11 Dec 2021 00:31:25: 35000000 INFO @ Sat, 11 Dec 2021 00:31:29: 40000000 INFO @ Sat, 11 Dec 2021 00:31:32: 36000000 INFO @ Sat, 11 Dec 2021 00:31:36: 41000000 INFO @ Sat, 11 Dec 2021 00:31:37: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 00:31:40: 37000000 INFO @ Sat, 11 Dec 2021 00:31:43: 42000000 INFO @ Sat, 11 Dec 2021 00:31:47: 38000000 INFO @ Sat, 11 Dec 2021 00:31:50: 43000000 INFO @ Sat, 11 Dec 2021 00:31:51: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.05_peaks.xls INFO @ Sat, 11 Dec 2021 00:31:51: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.05_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 00:31:51: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.05_summits.bed INFO @ Sat, 11 Dec 2021 00:31:51: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (4695 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 00:31:54: 39000000 INFO @ Sat, 11 Dec 2021 00:31:55: #1 tag size is determined as 151 bps INFO @ Sat, 11 Dec 2021 00:31:55: #1 tag size = 151 INFO @ Sat, 11 Dec 2021 00:31:55: #1 total tags in treatment: 17722808 INFO @ Sat, 11 Dec 2021 00:31:55: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 00:31:55: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 00:31:56: #1 tags after filtering in treatment: 13951722 INFO @ Sat, 11 Dec 2021 00:31:56: #1 Redundant rate of treatment: 0.21 INFO @ Sat, 11 Dec 2021 00:31:56: #1 finished! INFO @ Sat, 11 Dec 2021 00:31:56: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 00:31:56: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 00:31:56: #2 number of paired peaks: 105 WARNING @ Sat, 11 Dec 2021 00:31:56: Fewer paired peaks (105) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 105 pairs to build model! INFO @ Sat, 11 Dec 2021 00:31:56: start model_add_line... INFO @ Sat, 11 Dec 2021 00:31:56: start X-correlation... INFO @ Sat, 11 Dec 2021 00:31:56: end of X-cor INFO @ Sat, 11 Dec 2021 00:31:56: #2 finished! INFO @ Sat, 11 Dec 2021 00:31:56: #2 predicted fragment length is 166 bps INFO @ Sat, 11 Dec 2021 00:31:56: #2 alternative fragment length(s) may be 4,166 bps INFO @ Sat, 11 Dec 2021 00:31:56: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.10_model.r WARNING @ Sat, 11 Dec 2021 00:31:57: #2 Since the d (166) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 00:31:57: #2 You may need to consider one of the other alternative d(s): 4,166 WARNING @ Sat, 11 Dec 2021 00:31:57: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 00:31:57: #3 Call peaks... INFO @ Sat, 11 Dec 2021 00:31:57: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 00:32:01: 40000000 INFO @ Sat, 11 Dec 2021 00:32:07: 41000000 INFO @ Sat, 11 Dec 2021 00:32:14: 42000000 INFO @ Sat, 11 Dec 2021 00:32:20: 43000000 INFO @ Sat, 11 Dec 2021 00:32:26: #1 tag size is determined as 151 bps INFO @ Sat, 11 Dec 2021 00:32:26: #1 tag size = 151 INFO @ Sat, 11 Dec 2021 00:32:26: #1 total tags in treatment: 17722808 INFO @ Sat, 11 Dec 2021 00:32:26: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 00:32:26: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 00:32:26: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 00:32:26: #1 tags after filtering in treatment: 13951722 INFO @ Sat, 11 Dec 2021 00:32:26: #1 Redundant rate of treatment: 0.21 INFO @ Sat, 11 Dec 2021 00:32:26: #1 finished! INFO @ Sat, 11 Dec 2021 00:32:26: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 00:32:26: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 00:32:27: #2 number of paired peaks: 105 WARNING @ Sat, 11 Dec 2021 00:32:27: Fewer paired peaks (105) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 105 pairs to build model! INFO @ Sat, 11 Dec 2021 00:32:27: start model_add_line... INFO @ Sat, 11 Dec 2021 00:32:27: start X-correlation... INFO @ Sat, 11 Dec 2021 00:32:27: end of X-cor INFO @ Sat, 11 Dec 2021 00:32:27: #2 finished! INFO @ Sat, 11 Dec 2021 00:32:27: #2 predicted fragment length is 166 bps INFO @ Sat, 11 Dec 2021 00:32:27: #2 alternative fragment length(s) may be 4,166 bps INFO @ Sat, 11 Dec 2021 00:32:27: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.20_model.r WARNING @ Sat, 11 Dec 2021 00:32:27: #2 Since the d (166) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 00:32:27: #2 You may need to consider one of the other alternative d(s): 4,166 WARNING @ Sat, 11 Dec 2021 00:32:27: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 00:32:27: #3 Call peaks... INFO @ Sat, 11 Dec 2021 00:32:27: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 00:32:41: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.10_peaks.xls INFO @ Sat, 11 Dec 2021 00:32:41: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.10_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 00:32:41: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.10_summits.bed INFO @ Sat, 11 Dec 2021 00:32:41: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (1362 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 00:32:55: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 00:33:10: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.20_peaks.xls INFO @ Sat, 11 Dec 2021 00:33:10: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.20_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 00:33:10: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9910785/SRX9910785.20_summits.bed INFO @ Sat, 11 Dec 2021 00:33:10: Done! pass1 - making usageList (12 chroms): 1 millis pass2 - checking and writing primary data (305 records, 4 fields): 1 millis CompletedMACS2peakCalling