Job ID = 14170757 SRX = SRX9434492 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 31537026 spots for SRR12982890/SRR12982890.sra Written 31537026 spots for SRR12982890/SRR12982890.sra fastq に変換しました。 bowtie でマッピング中... Your job 14171707 ("srTdm6") has been submitted Time loading reference: 00:00:01 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:19:51 31537026 reads; of these: 31537026 (100.00%) were paired; of these: 2014197 (6.39%) aligned concordantly 0 times 13463131 (42.69%) aligned concordantly exactly 1 time 16059698 (50.92%) aligned concordantly >1 times ---- 2014197 pairs aligned concordantly 0 times; of these: 283855 (14.09%) aligned discordantly 1 time ---- 1730342 pairs aligned 0 times concordantly or discordantly; of these: 3460684 mates make up the pairs; of these: 1610165 (46.53%) aligned 0 times 439638 (12.70%) aligned exactly 1 time 1410881 (40.77%) aligned >1 times 97.45% overall alignment rate Time searching: 02:19:52 Overall time: 02:19:52 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 2523221 / 29784454 = 0.0847 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 11:03:49: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 11:03:49: #1 read tag files... INFO @ Sat, 11 Dec 2021 11:03:49: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 11:03:56: 1000000 INFO @ Sat, 11 Dec 2021 11:04:03: 2000000 INFO @ Sat, 11 Dec 2021 11:04:11: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 11:04:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 11:04:18: #1 read tag files... INFO @ Sat, 11 Dec 2021 11:04:18: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 11:04:18: 4000000 INFO @ Sat, 11 Dec 2021 11:04:26: 5000000 INFO @ Sat, 11 Dec 2021 11:04:28: 1000000 INFO @ Sat, 11 Dec 2021 11:04:34: 6000000 INFO @ Sat, 11 Dec 2021 11:04:35: 2000000 INFO @ Sat, 11 Dec 2021 11:04:42: 7000000 INFO @ Sat, 11 Dec 2021 11:04:43: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 11:04:48: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 11:04:48: #1 read tag files... INFO @ Sat, 11 Dec 2021 11:04:48: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 11:04:49: 8000000 INFO @ Sat, 11 Dec 2021 11:04:51: 4000000 INFO @ Sat, 11 Dec 2021 11:04:56: 1000000 INFO @ Sat, 11 Dec 2021 11:04:57: 9000000 INFO @ Sat, 11 Dec 2021 11:04:58: 5000000 INFO @ Sat, 11 Dec 2021 11:05:03: 2000000 INFO @ Sat, 11 Dec 2021 11:05:05: 10000000 INFO @ Sat, 11 Dec 2021 11:05:06: 6000000 INFO @ Sat, 11 Dec 2021 11:05:11: 3000000 INFO @ Sat, 11 Dec 2021 11:05:13: 11000000 INFO @ Sat, 11 Dec 2021 11:05:14: 7000000 INFO @ Sat, 11 Dec 2021 11:05:19: 4000000 INFO @ Sat, 11 Dec 2021 11:05:21: 12000000 INFO @ Sat, 11 Dec 2021 11:05:22: 8000000 INFO @ Sat, 11 Dec 2021 11:05:28: 5000000 INFO @ Sat, 11 Dec 2021 11:05:30: 13000000 INFO @ Sat, 11 Dec 2021 11:05:31: 9000000 INFO @ Sat, 11 Dec 2021 11:05:37: 6000000 INFO @ Sat, 11 Dec 2021 11:05:39: 14000000 INFO @ Sat, 11 Dec 2021 11:05:40: 10000000 INFO @ Sat, 11 Dec 2021 11:05:46: 7000000 INFO @ Sat, 11 Dec 2021 11:05:48: 15000000 INFO @ Sat, 11 Dec 2021 11:05:49: 11000000 INFO @ Sat, 11 Dec 2021 11:05:54: 8000000 INFO @ Sat, 11 Dec 2021 11:05:56: 16000000 INFO @ Sat, 11 Dec 2021 11:05:56: 12000000 INFO @ Sat, 11 Dec 2021 11:06:03: 17000000 INFO @ Sat, 11 Dec 2021 11:06:05: 9000000 INFO @ Sat, 11 Dec 2021 11:06:05: 13000000 INFO @ Sat, 11 Dec 2021 11:06:11: 18000000 INFO @ Sat, 11 Dec 2021 11:06:13: 14000000 INFO @ Sat, 11 Dec 2021 11:06:15: 10000000 INFO @ Sat, 11 Dec 2021 11:06:18: 19000000 INFO @ Sat, 11 Dec 2021 11:06:20: 15000000 INFO @ Sat, 11 Dec 2021 11:06:25: 11000000 INFO @ Sat, 11 Dec 2021 11:06:26: 20000000 INFO @ Sat, 11 Dec 2021 11:06:28: 16000000 INFO @ Sat, 11 Dec 2021 11:06:33: 21000000 INFO @ Sat, 11 Dec 2021 11:06:36: 12000000 INFO @ Sat, 11 Dec 2021 11:06:36: 17000000 INFO @ Sat, 11 Dec 2021 11:06:41: 22000000 INFO @ Sat, 11 Dec 2021 11:06:44: 18000000 INFO @ Sat, 11 Dec 2021 11:06:47: 13000000 INFO @ Sat, 11 Dec 2021 11:06:49: 23000000 INFO @ Sat, 11 Dec 2021 11:06:52: 19000000 INFO @ Sat, 11 Dec 2021 11:06:56: 14000000 INFO @ Sat, 11 Dec 2021 11:06:57: 24000000 INFO @ Sat, 11 Dec 2021 11:07:00: 20000000 INFO @ Sat, 11 Dec 2021 11:07:04: 15000000 INFO @ Sat, 11 Dec 2021 11:07:05: 25000000 INFO @ Sat, 11 Dec 2021 11:07:08: 21000000 INFO @ Sat, 11 Dec 2021 11:07:12: 16000000 INFO @ Sat, 11 Dec 2021 11:07:13: 26000000 INFO @ Sat, 11 Dec 2021 11:07:16: 22000000 INFO @ Sat, 11 Dec 2021 11:07:20: 17000000 INFO @ Sat, 11 Dec 2021 11:07:21: 27000000 INFO @ Sat, 11 Dec 2021 11:07:24: 23000000 INFO @ Sat, 11 Dec 2021 11:07:28: 18000000 INFO @ Sat, 11 Dec 2021 11:07:28: 28000000 INFO @ Sat, 11 Dec 2021 11:07:32: 24000000 INFO @ Sat, 11 Dec 2021 11:07:36: 19000000 INFO @ Sat, 11 Dec 2021 11:07:36: 29000000 INFO @ Sat, 11 Dec 2021 11:07:40: 25000000 INFO @ Sat, 11 Dec 2021 11:07:44: 20000000 INFO @ Sat, 11 Dec 2021 11:07:44: 30000000 INFO @ Sat, 11 Dec 2021 11:07:48: 26000000 INFO @ Sat, 11 Dec 2021 11:07:52: 21000000 INFO @ Sat, 11 Dec 2021 11:07:53: 31000000 INFO @ Sat, 11 Dec 2021 11:07:57: 27000000 INFO @ Sat, 11 Dec 2021 11:08:01: 22000000 INFO @ Sat, 11 Dec 2021 11:08:02: 32000000 INFO @ Sat, 11 Dec 2021 11:08:05: 28000000 INFO @ Sat, 11 Dec 2021 11:08:09: 23000000 INFO @ Sat, 11 Dec 2021 11:08:10: 33000000 INFO @ Sat, 11 Dec 2021 11:08:12: 29000000 INFO @ Sat, 11 Dec 2021 11:08:17: 24000000 INFO @ Sat, 11 Dec 2021 11:08:18: 34000000 INFO @ Sat, 11 Dec 2021 11:08:20: 30000000 INFO @ Sat, 11 Dec 2021 11:08:26: 25000000 INFO @ Sat, 11 Dec 2021 11:08:27: 35000000 INFO @ Sat, 11 Dec 2021 11:08:28: 31000000 INFO @ Sat, 11 Dec 2021 11:08:34: 26000000 INFO @ Sat, 11 Dec 2021 11:08:35: 36000000 INFO @ Sat, 11 Dec 2021 11:08:36: 32000000 INFO @ Sat, 11 Dec 2021 11:08:41: 27000000 INFO @ Sat, 11 Dec 2021 11:08:43: 37000000 INFO @ Sat, 11 Dec 2021 11:08:44: 33000000 INFO @ Sat, 11 Dec 2021 11:08:49: 28000000 INFO @ Sat, 11 Dec 2021 11:08:51: 38000000 INFO @ Sat, 11 Dec 2021 11:08:52: 34000000 INFO @ Sat, 11 Dec 2021 11:08:57: 29000000 INFO @ Sat, 11 Dec 2021 11:08:59: 39000000 INFO @ Sat, 11 Dec 2021 11:08:59: 35000000 INFO @ Sat, 11 Dec 2021 11:09:05: 30000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 11 Dec 2021 11:09:07: 40000000 INFO @ Sat, 11 Dec 2021 11:09:08: 36000000 INFO @ Sat, 11 Dec 2021 11:09:14: 31000000 INFO @ Sat, 11 Dec 2021 11:09:15: 41000000 INFO @ Sat, 11 Dec 2021 11:09:16: 37000000 INFO @ Sat, 11 Dec 2021 11:09:22: 32000000 INFO @ Sat, 11 Dec 2021 11:09:23: 42000000 INFO @ Sat, 11 Dec 2021 11:09:24: 38000000 INFO @ Sat, 11 Dec 2021 11:09:29: 33000000 INFO @ Sat, 11 Dec 2021 11:09:31: 43000000 INFO @ Sat, 11 Dec 2021 11:09:32: 39000000 INFO @ Sat, 11 Dec 2021 11:09:38: 34000000 INFO @ Sat, 11 Dec 2021 11:09:39: 44000000 INFO @ Sat, 11 Dec 2021 11:09:40: 40000000 INFO @ Sat, 11 Dec 2021 11:09:46: 35000000 INFO @ Sat, 11 Dec 2021 11:09:47: 45000000 INFO @ Sat, 11 Dec 2021 11:09:48: 41000000 INFO @ Sat, 11 Dec 2021 11:09:54: 36000000 INFO @ Sat, 11 Dec 2021 11:09:55: 46000000 INFO @ Sat, 11 Dec 2021 11:09:56: 42000000 INFO @ Sat, 11 Dec 2021 11:10:02: 37000000 INFO @ Sat, 11 Dec 2021 11:10:03: 47000000 INFO @ Sat, 11 Dec 2021 11:10:04: 43000000 INFO @ Sat, 11 Dec 2021 11:10:10: 38000000 INFO @ Sat, 11 Dec 2021 11:10:11: 48000000 INFO @ Sat, 11 Dec 2021 11:10:13: 44000000 INFO @ Sat, 11 Dec 2021 11:10:19: 39000000 INFO @ Sat, 11 Dec 2021 11:10:20: 49000000 INFO @ Sat, 11 Dec 2021 11:10:21: 45000000 INFO @ Sat, 11 Dec 2021 11:10:27: 40000000 INFO @ Sat, 11 Dec 2021 11:10:28: 50000000 INFO @ Sat, 11 Dec 2021 11:10:29: 46000000 BigWig に変換しました。 INFO @ Sat, 11 Dec 2021 11:10:35: 41000000 INFO @ Sat, 11 Dec 2021 11:10:35: 51000000 INFO @ Sat, 11 Dec 2021 11:10:37: 47000000 INFO @ Sat, 11 Dec 2021 11:10:43: 42000000 INFO @ Sat, 11 Dec 2021 11:10:43: 52000000 INFO @ Sat, 11 Dec 2021 11:10:45: 48000000 INFO @ Sat, 11 Dec 2021 11:10:50: 43000000 INFO @ Sat, 11 Dec 2021 11:10:52: 53000000 INFO @ Sat, 11 Dec 2021 11:10:53: 49000000 INFO @ Sat, 11 Dec 2021 11:10:58: 44000000 INFO @ Sat, 11 Dec 2021 11:11:00: 54000000 INFO @ Sat, 11 Dec 2021 11:11:01: 50000000 INFO @ Sat, 11 Dec 2021 11:11:06: 45000000 INFO @ Sat, 11 Dec 2021 11:11:07: 55000000 INFO @ Sat, 11 Dec 2021 11:11:08: 51000000 INFO @ Sat, 11 Dec 2021 11:11:14: 46000000 INFO @ Sat, 11 Dec 2021 11:11:16: 56000000 INFO @ Sat, 11 Dec 2021 11:11:16: 52000000 INFO @ Sat, 11 Dec 2021 11:11:19: #1 tag size is determined as 50 bps INFO @ Sat, 11 Dec 2021 11:11:19: #1 tag size = 50 INFO @ Sat, 11 Dec 2021 11:11:19: #1 total tags in treatment: 27026413 INFO @ Sat, 11 Dec 2021 11:11:19: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 11:11:19: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 11:11:19: #1 tags after filtering in treatment: 22096011 INFO @ Sat, 11 Dec 2021 11:11:19: #1 Redundant rate of treatment: 0.18 INFO @ Sat, 11 Dec 2021 11:11:19: #1 finished! INFO @ Sat, 11 Dec 2021 11:11:19: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 11:11:19: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 11:11:21: #2 number of paired peaks: 2831 INFO @ Sat, 11 Dec 2021 11:11:21: start model_add_line... INFO @ Sat, 11 Dec 2021 11:11:21: start X-correlation... INFO @ Sat, 11 Dec 2021 11:11:22: 47000000 INFO @ Sat, 11 Dec 2021 11:11:22: end of X-cor INFO @ Sat, 11 Dec 2021 11:11:22: #2 finished! INFO @ Sat, 11 Dec 2021 11:11:22: #2 predicted fragment length is 176 bps INFO @ Sat, 11 Dec 2021 11:11:22: #2 alternative fragment length(s) may be 176 bps INFO @ Sat, 11 Dec 2021 11:11:22: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.05_model.r INFO @ Sat, 11 Dec 2021 11:11:22: #3 Call peaks... INFO @ Sat, 11 Dec 2021 11:11:22: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 11:11:23: 53000000 INFO @ Sat, 11 Dec 2021 11:11:29: 48000000 INFO @ Sat, 11 Dec 2021 11:11:31: 54000000 INFO @ Sat, 11 Dec 2021 11:11:37: 49000000 INFO @ Sat, 11 Dec 2021 11:11:38: 55000000 INFO @ Sat, 11 Dec 2021 11:11:44: 50000000 INFO @ Sat, 11 Dec 2021 11:11:45: 56000000 INFO @ Sat, 11 Dec 2021 11:11:48: #1 tag size is determined as 50 bps INFO @ Sat, 11 Dec 2021 11:11:48: #1 tag size = 50 INFO @ Sat, 11 Dec 2021 11:11:48: #1 total tags in treatment: 27026413 INFO @ Sat, 11 Dec 2021 11:11:48: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 11:11:48: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 11:11:48: #1 tags after filtering in treatment: 22096011 INFO @ Sat, 11 Dec 2021 11:11:48: #1 Redundant rate of treatment: 0.18 INFO @ Sat, 11 Dec 2021 11:11:48: #1 finished! INFO @ Sat, 11 Dec 2021 11:11:48: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 11:11:48: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 11:11:50: #2 number of paired peaks: 2831 INFO @ Sat, 11 Dec 2021 11:11:50: start model_add_line... INFO @ Sat, 11 Dec 2021 11:11:50: start X-correlation... INFO @ Sat, 11 Dec 2021 11:11:50: end of X-cor INFO @ Sat, 11 Dec 2021 11:11:50: #2 finished! INFO @ Sat, 11 Dec 2021 11:11:50: #2 predicted fragment length is 176 bps INFO @ Sat, 11 Dec 2021 11:11:50: #2 alternative fragment length(s) may be 176 bps INFO @ Sat, 11 Dec 2021 11:11:50: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.10_model.r INFO @ Sat, 11 Dec 2021 11:11:50: #3 Call peaks... INFO @ Sat, 11 Dec 2021 11:11:50: 51000000 INFO @ Sat, 11 Dec 2021 11:11:50: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 11:11:57: 52000000 INFO @ Sat, 11 Dec 2021 11:12:04: 53000000 INFO @ Sat, 11 Dec 2021 11:12:10: 54000000 INFO @ Sat, 11 Dec 2021 11:12:17: 55000000 INFO @ Sat, 11 Dec 2021 11:12:21: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 11:12:23: 56000000 INFO @ Sat, 11 Dec 2021 11:12:26: #1 tag size is determined as 50 bps INFO @ Sat, 11 Dec 2021 11:12:26: #1 tag size = 50 INFO @ Sat, 11 Dec 2021 11:12:26: #1 total tags in treatment: 27026413 INFO @ Sat, 11 Dec 2021 11:12:26: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 11:12:26: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 11:12:27: #1 tags after filtering in treatment: 22096011 INFO @ Sat, 11 Dec 2021 11:12:27: #1 Redundant rate of treatment: 0.18 INFO @ Sat, 11 Dec 2021 11:12:27: #1 finished! INFO @ Sat, 11 Dec 2021 11:12:27: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 11:12:27: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 11:12:29: #2 number of paired peaks: 2831 INFO @ Sat, 11 Dec 2021 11:12:29: start model_add_line... INFO @ Sat, 11 Dec 2021 11:12:29: start X-correlation... INFO @ Sat, 11 Dec 2021 11:12:29: end of X-cor INFO @ Sat, 11 Dec 2021 11:12:29: #2 finished! INFO @ Sat, 11 Dec 2021 11:12:29: #2 predicted fragment length is 176 bps INFO @ Sat, 11 Dec 2021 11:12:29: #2 alternative fragment length(s) may be 176 bps INFO @ Sat, 11 Dec 2021 11:12:29: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.20_model.r INFO @ Sat, 11 Dec 2021 11:12:29: #3 Call peaks... INFO @ Sat, 11 Dec 2021 11:12:29: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 11:12:47: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.05_peaks.xls INFO @ Sat, 11 Dec 2021 11:12:47: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.05_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 11:12:47: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.05_summits.bed INFO @ Sat, 11 Dec 2021 11:12:47: Done! pass1 - making usageList (14 chroms): 4 millis pass2 - checking and writing primary data (18606 records, 4 fields): 47 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 11:12:48: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 11:13:12: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.10_peaks.xls INFO @ Sat, 11 Dec 2021 11:13:12: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.10_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 11:13:12: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.10_summits.bed INFO @ Sat, 11 Dec 2021 11:13:13: Done! pass1 - making usageList (14 chroms): 5 millis pass2 - checking and writing primary data (12552 records, 4 fields): 30 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 11:13:28: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 11:13:55: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.20_peaks.xls INFO @ Sat, 11 Dec 2021 11:13:55: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.20_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 11:13:55: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9434492/SRX9434492.20_summits.bed INFO @ Sat, 11 Dec 2021 11:13:55: Done! pass1 - making usageList (14 chroms): 2 millis pass2 - checking and writing primary data (6841 records, 4 fields): 12 millis CompletedMACS2peakCalling