Job ID = 14168922 SRX = SRX9217373 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 34863269 spots for SRR12744932/SRR12744932.sra Written 34863269 spots for SRR12744932/SRR12744932.sra fastq に変換しました。 bowtie でマッピング中... Your job 14170038 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:56:19 34863269 reads; of these: 34863269 (100.00%) were paired; of these: 4814676 (13.81%) aligned concordantly 0 times 17215333 (49.38%) aligned concordantly exactly 1 time 12833260 (36.81%) aligned concordantly >1 times ---- 4814676 pairs aligned concordantly 0 times; of these: 1424905 (29.60%) aligned discordantly 1 time ---- 3389771 pairs aligned 0 times concordantly or discordantly; of these: 6779542 mates make up the pairs; of these: 5693182 (83.98%) aligned 0 times 469677 (6.93%) aligned exactly 1 time 616683 (9.10%) aligned >1 times 91.83% overall alignment rate Time searching: 00:56:20 Overall time: 00:56:20 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 10521391 / 27370434 = 0.3844 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 23:06:54: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 23:06:54: #1 read tag files... INFO @ Fri, 10 Dec 2021 23:06:54: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 23:07:04: 1000000 INFO @ Fri, 10 Dec 2021 23:07:15: 2000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 23:07:22: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 23:07:22: #1 read tag files... INFO @ Fri, 10 Dec 2021 23:07:22: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 23:07:25: 3000000 INFO @ Fri, 10 Dec 2021 23:07:33: 1000000 INFO @ Fri, 10 Dec 2021 23:07:36: 4000000 INFO @ Fri, 10 Dec 2021 23:07:44: 2000000 INFO @ Fri, 10 Dec 2021 23:07:47: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 23:07:52: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 23:07:52: #1 read tag files... INFO @ Fri, 10 Dec 2021 23:07:52: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 23:07:55: 3000000 INFO @ Fri, 10 Dec 2021 23:07:59: 6000000 INFO @ Fri, 10 Dec 2021 23:08:02: 1000000 INFO @ Fri, 10 Dec 2021 23:08:07: 4000000 INFO @ Fri, 10 Dec 2021 23:08:10: 7000000 INFO @ Fri, 10 Dec 2021 23:08:12: 2000000 INFO @ Fri, 10 Dec 2021 23:08:19: 5000000 INFO @ Fri, 10 Dec 2021 23:08:21: 8000000 INFO @ Fri, 10 Dec 2021 23:08:22: 3000000 INFO @ Fri, 10 Dec 2021 23:08:30: 6000000 INFO @ Fri, 10 Dec 2021 23:08:31: 9000000 INFO @ Fri, 10 Dec 2021 23:08:32: 4000000 INFO @ Fri, 10 Dec 2021 23:08:41: 7000000 INFO @ Fri, 10 Dec 2021 23:08:42: 5000000 INFO @ Fri, 10 Dec 2021 23:08:42: 10000000 INFO @ Fri, 10 Dec 2021 23:08:52: 6000000 INFO @ Fri, 10 Dec 2021 23:08:52: 8000000 INFO @ Fri, 10 Dec 2021 23:08:53: 11000000 INFO @ Fri, 10 Dec 2021 23:09:02: 7000000 INFO @ Fri, 10 Dec 2021 23:09:04: 9000000 INFO @ Fri, 10 Dec 2021 23:09:04: 12000000 INFO @ Fri, 10 Dec 2021 23:09:12: 8000000 INFO @ Fri, 10 Dec 2021 23:09:15: 10000000 INFO @ Fri, 10 Dec 2021 23:09:15: 13000000 INFO @ Fri, 10 Dec 2021 23:09:22: 9000000 INFO @ Fri, 10 Dec 2021 23:09:26: 11000000 INFO @ Fri, 10 Dec 2021 23:09:27: 14000000 INFO @ Fri, 10 Dec 2021 23:09:31: 10000000 INFO @ Fri, 10 Dec 2021 23:09:37: 12000000 INFO @ Fri, 10 Dec 2021 23:09:38: 15000000 INFO @ Fri, 10 Dec 2021 23:09:41: 11000000 INFO @ Fri, 10 Dec 2021 23:09:48: 16000000 INFO @ Fri, 10 Dec 2021 23:09:48: 13000000 INFO @ Fri, 10 Dec 2021 23:09:51: 12000000 INFO @ Fri, 10 Dec 2021 23:09:59: 17000000 INFO @ Fri, 10 Dec 2021 23:10:00: 14000000 INFO @ Fri, 10 Dec 2021 23:10:01: 13000000 INFO @ Fri, 10 Dec 2021 23:10:10: 18000000 INFO @ Fri, 10 Dec 2021 23:10:11: 15000000 INFO @ Fri, 10 Dec 2021 23:10:12: 14000000 INFO @ Fri, 10 Dec 2021 23:10:22: 19000000 INFO @ Fri, 10 Dec 2021 23:10:22: 16000000 INFO @ Fri, 10 Dec 2021 23:10:22: 15000000 INFO @ Fri, 10 Dec 2021 23:10:32: 16000000 INFO @ Fri, 10 Dec 2021 23:10:33: 20000000 INFO @ Fri, 10 Dec 2021 23:10:33: 17000000 INFO @ Fri, 10 Dec 2021 23:10:43: 17000000 INFO @ Fri, 10 Dec 2021 23:10:44: 21000000 INFO @ Fri, 10 Dec 2021 23:10:45: 18000000 INFO @ Fri, 10 Dec 2021 23:10:53: 18000000 INFO @ Fri, 10 Dec 2021 23:10:56: 22000000 INFO @ Fri, 10 Dec 2021 23:10:56: 19000000 INFO @ Fri, 10 Dec 2021 23:11:02: 19000000 INFO @ Fri, 10 Dec 2021 23:11:07: 23000000 INFO @ Fri, 10 Dec 2021 23:11:08: 20000000 INFO @ Fri, 10 Dec 2021 23:11:12: 20000000 INFO @ Fri, 10 Dec 2021 23:11:18: 24000000 INFO @ Fri, 10 Dec 2021 23:11:20: 21000000 INFO @ Fri, 10 Dec 2021 23:11:22: 21000000 INFO @ Fri, 10 Dec 2021 23:11:30: 25000000 INFO @ Fri, 10 Dec 2021 23:11:31: 22000000 INFO @ Fri, 10 Dec 2021 23:11:31: 22000000 INFO @ Fri, 10 Dec 2021 23:11:41: 26000000 INFO @ Fri, 10 Dec 2021 23:11:41: 23000000 INFO @ Fri, 10 Dec 2021 23:11:43: 23000000 INFO @ Fri, 10 Dec 2021 23:11:51: 24000000 INFO @ Fri, 10 Dec 2021 23:11:52: 27000000 INFO @ Fri, 10 Dec 2021 23:11:54: 24000000 INFO @ Fri, 10 Dec 2021 23:12:00: 25000000 INFO @ Fri, 10 Dec 2021 23:12:03: 28000000 INFO @ Fri, 10 Dec 2021 23:12:06: 25000000 INFO @ Fri, 10 Dec 2021 23:12:10: 26000000 INFO @ Fri, 10 Dec 2021 23:12:14: 29000000 INFO @ Fri, 10 Dec 2021 23:12:17: 26000000 INFO @ Fri, 10 Dec 2021 23:12:19: 27000000 INFO @ Fri, 10 Dec 2021 23:12:24: 30000000 INFO @ Fri, 10 Dec 2021 23:12:29: 27000000 INFO @ Fri, 10 Dec 2021 23:12:29: 28000000 INFO @ Fri, 10 Dec 2021 23:12:35: 31000000 INFO @ Fri, 10 Dec 2021 23:12:39: 29000000 INFO @ Fri, 10 Dec 2021 23:12:40: 28000000 INFO @ Fri, 10 Dec 2021 23:12:46: 32000000 INFO @ Fri, 10 Dec 2021 23:12:48: 30000000 INFO @ Fri, 10 Dec 2021 23:12:52: 29000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 23:12:56: 33000000 INFO @ Fri, 10 Dec 2021 23:12:58: 31000000 INFO @ Fri, 10 Dec 2021 23:13:03: 30000000 INFO @ Fri, 10 Dec 2021 23:13:06: 34000000 INFO @ Fri, 10 Dec 2021 23:13:07: 32000000 INFO @ Fri, 10 Dec 2021 23:13:14: 31000000 INFO @ Fri, 10 Dec 2021 23:13:17: 35000000 INFO @ Fri, 10 Dec 2021 23:13:17: 33000000 INFO @ Fri, 10 Dec 2021 23:13:25: 32000000 INFO @ Fri, 10 Dec 2021 23:13:27: 34000000 INFO @ Fri, 10 Dec 2021 23:13:28: 36000000 INFO @ Fri, 10 Dec 2021 23:13:35: 33000000 INFO @ Fri, 10 Dec 2021 23:13:37: 35000000 INFO @ Fri, 10 Dec 2021 23:13:38: 37000000 INFO @ Fri, 10 Dec 2021 23:13:46: 34000000 INFO @ Fri, 10 Dec 2021 23:13:47: 36000000 INFO @ Fri, 10 Dec 2021 23:13:49: 38000000 INFO @ Fri, 10 Dec 2021 23:13:56: 37000000 INFO @ Fri, 10 Dec 2021 23:13:57: 35000000 INFO @ Fri, 10 Dec 2021 23:14:00: 39000000 INFO @ Fri, 10 Dec 2021 23:14:06: 38000000 INFO @ Fri, 10 Dec 2021 23:14:07: 36000000 INFO @ Fri, 10 Dec 2021 23:14:11: 40000000 INFO @ Fri, 10 Dec 2021 23:14:16: 39000000 BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 23:14:18: 37000000 INFO @ Fri, 10 Dec 2021 23:14:22: 41000000 INFO @ Fri, 10 Dec 2021 23:14:26: 40000000 INFO @ Fri, 10 Dec 2021 23:14:29: 38000000 INFO @ Fri, 10 Dec 2021 23:14:32: 42000000 INFO @ Fri, 10 Dec 2021 23:14:35: 41000000 INFO @ Fri, 10 Dec 2021 23:14:41: 39000000 INFO @ Fri, 10 Dec 2021 23:14:43: #1 tag size is determined as 49 bps INFO @ Fri, 10 Dec 2021 23:14:43: #1 tag size = 49 INFO @ Fri, 10 Dec 2021 23:14:43: #1 total tags in treatment: 19641993 INFO @ Fri, 10 Dec 2021 23:14:43: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 23:14:43: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 23:14:43: #1 tags after filtering in treatment: 12462068 INFO @ Fri, 10 Dec 2021 23:14:43: #1 Redundant rate of treatment: 0.37 INFO @ Fri, 10 Dec 2021 23:14:43: #1 finished! INFO @ Fri, 10 Dec 2021 23:14:43: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 23:14:43: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 23:14:44: #2 number of paired peaks: 857 WARNING @ Fri, 10 Dec 2021 23:14:44: Fewer paired peaks (857) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 857 pairs to build model! INFO @ Fri, 10 Dec 2021 23:14:44: start model_add_line... INFO @ Fri, 10 Dec 2021 23:14:45: start X-correlation... INFO @ Fri, 10 Dec 2021 23:14:45: end of X-cor INFO @ Fri, 10 Dec 2021 23:14:45: #2 finished! INFO @ Fri, 10 Dec 2021 23:14:45: #2 predicted fragment length is 50 bps INFO @ Fri, 10 Dec 2021 23:14:45: #2 alternative fragment length(s) may be 4,50 bps INFO @ Fri, 10 Dec 2021 23:14:45: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.05_model.r INFO @ Fri, 10 Dec 2021 23:14:45: 42000000 WARNING @ Fri, 10 Dec 2021 23:14:45: #2 Since the d (50) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 23:14:45: #2 You may need to consider one of the other alternative d(s): 4,50 WARNING @ Fri, 10 Dec 2021 23:14:45: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 23:14:45: #3 Call peaks... INFO @ Fri, 10 Dec 2021 23:14:45: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 23:14:52: 40000000 INFO @ Fri, 10 Dec 2021 23:14:54: #1 tag size is determined as 49 bps INFO @ Fri, 10 Dec 2021 23:14:54: #1 tag size = 49 INFO @ Fri, 10 Dec 2021 23:14:54: #1 total tags in treatment: 19641993 INFO @ Fri, 10 Dec 2021 23:14:54: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 23:14:54: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 23:14:55: #1 tags after filtering in treatment: 12462068 INFO @ Fri, 10 Dec 2021 23:14:55: #1 Redundant rate of treatment: 0.37 INFO @ Fri, 10 Dec 2021 23:14:55: #1 finished! INFO @ Fri, 10 Dec 2021 23:14:55: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 23:14:55: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 23:14:56: #2 number of paired peaks: 857 WARNING @ Fri, 10 Dec 2021 23:14:56: Fewer paired peaks (857) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 857 pairs to build model! INFO @ Fri, 10 Dec 2021 23:14:56: start model_add_line... INFO @ Fri, 10 Dec 2021 23:14:56: start X-correlation... INFO @ Fri, 10 Dec 2021 23:14:56: end of X-cor INFO @ Fri, 10 Dec 2021 23:14:56: #2 finished! INFO @ Fri, 10 Dec 2021 23:14:56: #2 predicted fragment length is 50 bps INFO @ Fri, 10 Dec 2021 23:14:56: #2 alternative fragment length(s) may be 4,50 bps INFO @ Fri, 10 Dec 2021 23:14:56: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.20_model.r WARNING @ Fri, 10 Dec 2021 23:14:56: #2 Since the d (50) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 23:14:56: #2 You may need to consider one of the other alternative d(s): 4,50 WARNING @ Fri, 10 Dec 2021 23:14:56: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 23:14:56: #3 Call peaks... INFO @ Fri, 10 Dec 2021 23:14:56: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 23:15:03: 41000000 INFO @ Fri, 10 Dec 2021 23:15:14: 42000000 INFO @ Fri, 10 Dec 2021 23:15:24: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 23:15:24: #1 tag size is determined as 49 bps INFO @ Fri, 10 Dec 2021 23:15:24: #1 tag size = 49 INFO @ Fri, 10 Dec 2021 23:15:24: #1 total tags in treatment: 19641993 INFO @ Fri, 10 Dec 2021 23:15:24: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 23:15:24: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 23:15:25: #1 tags after filtering in treatment: 12462068 INFO @ Fri, 10 Dec 2021 23:15:25: #1 Redundant rate of treatment: 0.37 INFO @ Fri, 10 Dec 2021 23:15:25: #1 finished! INFO @ Fri, 10 Dec 2021 23:15:25: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 23:15:25: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 23:15:26: #2 number of paired peaks: 857 WARNING @ Fri, 10 Dec 2021 23:15:26: Fewer paired peaks (857) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 857 pairs to build model! INFO @ Fri, 10 Dec 2021 23:15:26: start model_add_line... INFO @ Fri, 10 Dec 2021 23:15:26: start X-correlation... INFO @ Fri, 10 Dec 2021 23:15:26: end of X-cor INFO @ Fri, 10 Dec 2021 23:15:26: #2 finished! INFO @ Fri, 10 Dec 2021 23:15:26: #2 predicted fragment length is 50 bps INFO @ Fri, 10 Dec 2021 23:15:26: #2 alternative fragment length(s) may be 4,50 bps INFO @ Fri, 10 Dec 2021 23:15:26: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.10_model.r WARNING @ Fri, 10 Dec 2021 23:15:26: #2 Since the d (50) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 23:15:26: #2 You may need to consider one of the other alternative d(s): 4,50 WARNING @ Fri, 10 Dec 2021 23:15:26: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 23:15:26: #3 Call peaks... INFO @ Fri, 10 Dec 2021 23:15:26: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 23:15:32: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 23:15:43: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.05_peaks.xls INFO @ Fri, 10 Dec 2021 23:15:43: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 23:15:43: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.05_summits.bed INFO @ Fri, 10 Dec 2021 23:15:44: Done! pass1 - making usageList (15 chroms): 6 millis pass2 - checking and writing primary data (17363 records, 4 fields): 30 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 23:15:50: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.20_peaks.xls INFO @ Fri, 10 Dec 2021 23:15:50: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 23:15:50: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.20_summits.bed INFO @ Fri, 10 Dec 2021 23:15:50: Done! pass1 - making usageList (10 chroms): 1 millis pass2 - checking and writing primary data (746 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 23:16:04: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 23:16:24: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.10_peaks.xls INFO @ Fri, 10 Dec 2021 23:16:24: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 23:16:24: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9217373/SRX9217373.10_summits.bed INFO @ Fri, 10 Dec 2021 23:16:24: Done! pass1 - making usageList (14 chroms): 4 millis pass2 - checking and writing primary data (8395 records, 4 fields): 21 millis CompletedMACS2peakCalling